Moc11g28300 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g28300
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ty1-copia retrotransposon protein
Location	chr11: 20628766 .. 20635491 (+)
RNA-Seq Expression	Moc11g28300
Synteny	Moc11g28300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAAAAATGGGCAAATCCGGCATTTTATTCACCGGCCCTCAAAAGCATACACCGCAGGCACAGGGAAGCGTCGGAAAGTTCAATCAGAGGAAGAAGGCATCGACACAAGAGGGCAAAAAACCGGCAAGACAAGGGCGGTTACCGACAGCGGCGGTGGGGCTGTGATGGGTTTCAAGAAGATTTTAGTTCTGTACTCAAATTTGAGGGAGGGAGAGGAAGGCCCAAAAGACCAACGCCAACGCCCCTCCTCCGCCGCAGATTCGCCCGAAACTGGTGTGTTTCTTGATTACAACTACAATGATAATTTCCCTGTATTCCAATTTCCATTATTAGGGGCCGGAATTGTGGATATTAGAGAAGATGAAGGGGGGCGGGGTAGAGAAAAAAAGATAAAAAGAAAAAAATTACACATGATAAAAATAATATAAAATTATTTAATATTGACACGCCATTTAAAATTTGACGGCAACGTCATGTTAGTTGACTAGCAATCGAATAAGTTCAGGGATTATTAAACTGTAACTTTTTAAAATTTAGTAATCAAATAAACACTTATAAAATAAAATTTGTATTTATAAATTATTTTTATACCTGATGAGTTTATATTATAATAATAGATTTAAAATATTATATCACTGATAAAAGTAAACAAAAAATTAAAATATTTATATTTGCAGATCATTATATTTATATGTGATGCAAATATGGCATAATTTTACCACTTATTATAATTTAAAATTATTTGACTTTCCATTTTCAGGAACTAAAAAGTATGGATATATATATATATATATAATTTAAATATTTAATATTAATCTCATAAGTCAAAGGATTAATTAATTCCAAGTGTATTTTTTAAAAAGGAATAGAAAAACTAATTTTTAAAGTAAGTCACGTTGGAGCTTGTGTGTAGATACCACTTGTATCTAGAATATCTAATTTTCTAATTTATTATATTCATATCAATCTAATTCGAGGTTAACGATATGAATACTTCTAAGGCTTTGTCTCATAAACAAGATTTGTATGAAGAGTAACTAAAGTTTTGTACCTCGATTATGAGACTTTTATCTTTATTTATAGAGGGAGAAAACCTAAGATGTTCTAAATATATTTTTTCTTTTGAATTCTCAAAATTCAAGCGATGGAGTTGGATGTCTCGATTGGTCTTTAAAATGATCAAGAGAGTAGACTAGCGTAGGGCTTTGTATCACAAATATGGGACTATGGGAAACGACCTTTGGGCCTGGTTGTTCGGTCAAGGCTCAGCCCTATGTGTTCGTTGGCTCGAGTTTGTGGACCCATGATGGTCAACCCATAAGATTCAATCCAATGGCTAGTTTGCCCTGTTCGACCCCTAAGTTAGCATCCACATACTTGAGACTCTGGCCCGCACACACAATTTCTATGGCTTGTGTTTGAGGGCTCAGCTTTTAGATCATTTCTAAGCCCAAGGGCTTAAGTTGATCTAGGCTGGTATACTAGACTTTTTTGTAGTTTGTTTCGTAAATCGGACAATATAACTAATTATATCTAATATCAAGGATATCATTCACACTAAATGTATCATTAATATACTTCATTTTAATTATATCCATATGAGCGGTACAATCAACTTTTCTATTTTTTCATTAGGACCGAGTGTCCAATTTTTTTACAATATTTTCAAATTAGAAAAATAATTACTACATTTACAATTTACAATTAACTATTGAACTGTTATATATGTGTGCGTGTGAATTATTTAAATTTAAATTTAAAATATGTAATATTCACCCCATAAATCAAAAGAATAATTAATTATAATTATATATTTTAAAAAGAAATAGAAAAACTCTTTTTTAAGGTAAAGTCGTTGTAGCTTATGTAACCACTTGTATCTAAAATATCTAATTTTCTAATCTAAAAATATTTCTTATCAATCAAATTCGAGGTCAATAGTACGACTACTTCTAGGGCTTTGTCTCACAAATTATATTTGTCTAGTAATTAAGGTAATATTGTACTCCAATTATGAGACTTTTCTCTTTATTTATAGAGGACGAAAACTTAAGATCTTCTAGATATCTTTTTGTTTTGAATTCTCAAAATTGAAGTGACAAGAGTTGGATGTATCAACTACTCTTCAAGATGATCGAAAGAGCAAGCTAGTGCAGGGCTTTGTCTCACAAACATGGGACCATGGGGAACGACCTTTAGGACTTGGCCCACGGGCCATGACCATGGGCTCAGCCCCATGTGCTGGTTGGCTCGAATTTATGGGCCCATGATGGTCGACCCATAAGGTTCGGCCCAACGGTTAGTTTGCCCATCTCGACCCCTAGGTCAACTGTTGGGAATGACAAATGAATTGGAGAATTTTAAGGATACGTGGATGGATGAAAAATTGGTCGTTGAAGTTCTATTTTTGGGCCGCTGCATCAGTATAAATAAGGGTCATTCCTTACCATTTTCGATCATCCCATTCATTCAAGTTCTCCACCTCCACTCTCCCTTACACTATTCTTCAATTTTCACTTCTCTCCGCTACCTTAAACTAAGCACGAGATTGATTCAACTCTCATTCCGACGAGTGCATGTCTGAGTTGAAGGTTGTGTTAACCTTGGGGAGCATACCGGCAGTAAAACGATTTAGCACTGAGGTCATACCGATTTTGCTTTCAAGGTAGTGGTTCCACCCACGACACAAAAATTTTAGCTCCTGGTTCCAATTTTGTCCTTTTATTTCCAATAATTGAAAAGCAAAACTCATCTACCCATGGCTGCTATCCGATCTGGGAAGGTTTTGTCAGACTTGTCAAAATTGGAACCACTCGACGGATCCAACTACCGCCGATGGTCACAAAAGTTACTGATTTTCTTAGAGCAATTGGTGATCGACTACATCTCACTGCTGCTCAGCCCGCTGCCACTGCCACCGCTACAGCCACTACCACTATCGTTGCCGCCACTGTCGTTTCCATCACTGCAGCCGTCACTGATCCGCCTACCGTTGTCGCTGCCACCATTTCAGCTGTCGCTGCTGATCCCAAGACGTCTACTGCCACTACCGTCGAAACTGACAAATTCGAGAGAGACAACAAAATGGTCAGTGGGCATCTTCTCAACCATATGAATGACTCTTTTTTTTTTTATCTCTTTGTAGTCCAAAAATCTACAAAGGTCATTTGAGACACGTTAGAATCTAGATATGGTAGGGACGATGCAGGCAGGAGAAAGTACATCGTTGGTAAATTGCTGCAATTTCAAATTTAGGACGACAAAATGATGATGGATCAGGTTCATGAGTACGAGAATCTAGTGGCAAGTGTGCTGTCTGAAGGCACGAAGATGTGCGCGATTCTCCAGGCCAACTTGTTGCTCGAGAAATTTCCTTCTTCCTGGAATGATTACCGCAACCACTTGAAACATAAGAAGAAGGACCTGACTCTACAAGAACTTATCAGTCTCGTGCGCACGGAGGAAGCCAACAGGGTAAAGGATAAGCTCTCTTTTCAATCCCTAAGTTCAATTAAAGCTAATTTAGTTGAATATTCTAGTGCTTCGAAAGATAGGTTCAAAAACAAAGGGAAGCAAATTGCAAAGGATAGAGCTCAAAAGAACAAAGGTCTCCAACCAAAAAATACTAATGGAAGAATCAAGAAATCGAAACTGGTATGCTATGTCTGTGGAAAACCCGGGCACAAATCCTATAAGTGCACCCAGAAAAAAGATAGGAAAGATCAAAGGGCTACACCACAACCCAACCTTGTAAAGACGGACAACATCATTGCTGTCATGGTTGTGGAAGCAAATCCGGTATAGAACAAATCCGACTAGATTCTTGACACAGAAGTGTCCAGACATTTCTGCTTGAATTGTGACCTCTTCCACTACTTTCAAGACTCCGCTAATGGCAAATGTACTTTTATGAGGAACTCTGGCACAGCTAGAAAGAGAAGGTGTTCAACTTGAAACTCACATCTGGCAAAACTTTATAATTAAGTAATGTGTTGTATGTTCCTTCCCTGCATATGAATTTGGTGTCAGGAGGTCTGTTGAACTGAGCCGGACTTAAGATTGTGTTTCAGGTTGACAAGGTTATCATCACCAAAAATGGTGACTTTGTTGCTAAGAGCTATTTAGCAGATGGTTTGTTTGTTCTCCACACTATTTCAAATAAAATTAATTTTAGTTCTGTTTATATCATTGAGTCTCTTGATGTATGGCACGATAGATTAGGGCATGTGAATATTGCATCGGTTAAAAGACTTAGAACTTTAAATTAATTAATGCTTCTGATTTGCCTGAAAACTGTAAAATGTCTTATCTGTGTAGAAGCAGAGTTTGTAAAAAAAACCTTTTAAACCTGTTACTGCAAGGTGTACTGAACTCCTAGAATTAATTCATTCTGATTTAGCTGATTTAAAAAACACAACTAACAGAGGTGGAAAAATTACTATATTTCTTTTATTTATGATTTTTTTAGATATAGTAGTATGTTTTTGAAATTCAAAGCTAGTCAGAAAGATAAAAAGAATAAGATCAAAAAGGGGTGGTGAATATAATGATAATTCGCTTAGAGATTTTTGTGAAACAAGTGGGATTATACATGAATTTACTGCTCCATATTCACCTCAACAGAATGAAATAGCTAAACGGCAAAATAGAACTTTAAAAGAGATGATAAATGTCATGCTATTAAGTTCTGGTTTATCTGATGATATGTGGGGGAAAGCCGCACTTTCTGCCTGTTTTATTCTTAACAGGGTCCCTCACAAAAGGTTGGATAAGACACCATGGTATTCTCCAAACCTAAGCTACTTGAAGGTGTGGGGGTGCTTGGCAAAGGTGGCATATCCATAATTCAAAAAACCAACGGTTAGATCTAAAACTTTTGATTGTGTTTTCATTAATTATGCTCAAAATAGTTTTGCATATAGGTTCATGAGCTAGAATGATAAATTATGTGAATATAAAGATGCTGTATTTTTTGAAAAAATCTTCCCTATGACCAGAACTGGTGGTGAATCTAGTAGTATTTCAAAAACTGCATAAATGTCATTGTCCTCTACTTCTATTGATATGATAGACCTTGAACCTAGATCCAATGATGCAAAGATACTGAACCTAGGAGAAGTAAAAAGCAAAAAAGTTAGTAAAGCTTCTGACCTGACTGCCTAACTTCCTATATGGTAGAAAACTTTGACAAGATAGATTATCAGTTCGCTTGCATGTATTTTATAAACGAAGATCCTAAAACCTACCAAGATGCTATAAATGCTTTAGCTAGCCTATGGAAAGAAGCTATTAAAAGTGAGCTAGACTCCATAATTATGAATCAAACCTAGGAATTGGTAGATTTACCTGTAGGAAATATACCTATTAAGCGTAAATGGATATTTAAAAGAAAATTGAGACCAGATGGTACGATAGAAAAATACAAAACTAGACTAGTGATTGTCGGTTACATACAAAATTATGGCATTGATTACTTCGAAACTACTCTCCGGTAACCAAGATTGCCACAATTACATCTTTGATAACGATGGCGGCTATTCAAGGCTTAGTAATACACCAGGTTGATGTAAAAACAGATTTCTTTAATGGTGATTTAGAAGAGGAGATCTATATGACTGATTACGCTTGTTTACATGCGTAAAAAGAAGGTTTTAGATGCTGTTTTTACAATGTTTCAGCTTTGTTTCGGATTTTTCTCGATCGTTTGAGGTCCAATTCATGCAAAATTCATATATTATGGTTTGTGGTTGGCTTATATTGTATTTATGACATTTTAGGACCATTTGGGAGTGCAAATTAATCAAAAGAAGCAAAAAGACGGAAAAACCATCATGGGAGGCGCGAGGCGCCTGGGAAGCCTGCAGAAAAACTGGTTTTCTTCCAACTTTGCCCTTAATGAAACGCGTCTTCCAATGCGTTTTGGTGGTTCCAACCGATGCATACGTGTAGAAGAAGTGTTCCACTATCAGTTTGAGCACGATTTGGTCAGTCAAAAGAGTTGGAAATGGGTGATTCACCATCGTTTTAGGACCTACCTAACCAATTCTGCACAGCTATAAATTCCAGCAACTTCTCCACCAAAATCATCAAGCCTTGCTTCCTTCTCTTGATCATTTTTAGTGTTTCTTTGTTGCTTTCTAAGTACTTTTGAGTTGCTTTCATTAGTTGCTTTTGGTTTTTAAATCCCGAGTACTTTACATTCTTTTATTGAGCTTTGTTTTGTTTCCATTTGTACTTAGTTATTTACTACTTATTCAAATATATAAAAATCTAGCACTTTGCTTATCTTCCCTTTGCCTTTACTTTATTTTTAGTTAAGAGAGTTGTGTTTTTGGAGGAAAGAGCACGTGACACTCTCCCTTGCTTGAAAGAGAAGGGCGAAGCTCTCAATCCCGATAAAAACTCTCCGTTAGTTAACTTTTGTTTTTCACACATGCATTCCACATTCAACCGTTTTACTTGCTGTATTTTCTTCAATATGTCTTTCTAAATTCCTGTCTCTAGCCCGGTTATGGATAGTTAGCCTTTTATGTCTAAAAAGGGTTGCTAAGAGGTAGTGTTTTTGCTTTCCATTCATTGCTCAACATGTTTTCCCAAAAAGTTAGGATTTAGAGAAGGCCACTGTAAGTCTTAACAAGTCAATACTGAAAAAGTTGCTTATTTGCATTGTTGAGTGGTTAAACCGAGGAGAGGAGCGCCTTAGACATAAGGGTTCCGCTTAA

mRNA sequence

ATGAGGAAAAATGGGCAAATCCGGCATTTTATTCACCGGCCCTCAAAAGCATACACCGCAGGCACAGGGAAGCGTCGGAAAGTTCAATCAGAGGAAGAAGGCATCGACACAAGAGGGCAAAAAACCGGCAAGACAAGGGCGGTTACCGACAGCGGCGGTGGGGCTGTGATGGGTTTCAAGAAGATTTTAGTTCTGTACTCAAATTTGAGGGAGGGAGAGGAAGGCCCAAAAGACCAACGCCAACGCCCCTCCTCCGCCGCAGATTCGCCCGAAACTGGTGTGTTTCTTGATTACAACTACAATGATAATTTCCCTGTATTCCAATTTCCATTATTAGGGGCCGGAATTGTGGATATTAGAGAAGATGAAGGGGGGCGGGGTAGTGGTTCCACCCACGACACAAAAATTTTAGCTCCTGGTTCCAATTTTGTCCTTTTATTTCCAATAATTGAAAAGCAAAACTCATCTACCCATGGCTGCTATCCGATCTGGGAAGGTTTTGTCAGACTTGTCAAAATTGGAACCACTCGACGGATCCAACTACCGCCGATGGTCACAAAAGTTACTGATTTTCTTAGAGCAATTGGTGATCGACTACATCTCACTGCTGCTCAGCCCGCTGCCACTGCCACCGCTACAGCCACTACCACTATCGTTGCCGCCACTGTCGTTTCCATCACTGCAGCCGTCACTGATCCGCCTACCGTTGTCGCTGCCACCATTTCAGCTGTCGCTGCTGATCCCAAGACGTCTACTGCCACTACCGTCGAAACTGACAAATTCGAGAGAGACAACAAAATGGACGACAAAATGATGATGGATCAGGTTCATGAGTACGAGAATCTAGTGGCAAGTGTGCTGTCTGAAGGCACGAAGATGTGCGCGATTCTCCAGGCCAACTTGTTGCTCGAGAAATTTCCTTCTTCCTGGAATGATTACCGCAACCACTTGAAACATAAGAAGAAGGACCTGACTCTACAAGAACTTATCAGTCTCGTGCGCACGGAGGAAGCCAACAGGGTAAAGGATAAGCTCTCTTTTCAATCCCTAAGTTCAATTAAAGCTAATTTAGTTGAATATTCTAGTGCTTCGAAAGATAGGTTCAAAAACAAAGGGAAGCAAATTGCAAAGGATAGAGCTCAAAAGAACAAAGGTCTCCAACCAAAAAATACTAATGGAAGAATCAAGAAATCGAAACTGGTATGCTATGTCTGTGGAAAACCCGGGCACAAATCCTATAAGTGCACCCAGAAAAAAGATAGGAAAGATCAAAGGGCTACACCACAACCCAACCTTGTAAAGACGGACAACATCATTGCTGTCATGGTTGTGGAAGCAAATCCGGACCATTTGGGAGTGCAAATTAATCAAAAGAAGCAAAAAGACGGAAAAACCATCATGGGAGGCGCGAGGCGCCTGGGAAGCCTGCAGAAAAACTGGTTTTCTTCCAACTTTGCCCTTAATGAAACGCGTCTTCCAATGCGTTTTGGTGGTTCCAACCGATGCATACGTGTAGAAGAAGTGTTCCACTATCAGTTTGAGCACGATTTGGATTTAGAGAAGGCCACTGTAAGTCTTAACAAGTCAATACTGAAAAAGTTGCTTATTTGCATTGTTGAGTGGTTAAACCGAGGAGAGGAGCGCCTTAGACATAAGGGTTCCGCTTAA

Coding sequence (CDS)

ATGAGGAAAAATGGGCAAATCCGGCATTTTATTCACCGGCCCTCAAAAGCATACACCGCAGGCACAGGGAAGCGTCGGAAAGTTCAATCAGAGGAAGAAGGCATCGACACAAGAGGGCAAAAAACCGGCAAGACAAGGGCGGTTACCGACAGCGGCGGTGGGGCTGTGATGGGTTTCAAGAAGATTTTAGTTCTGTACTCAAATTTGAGGGAGGGAGAGGAAGGCCCAAAAGACCAACGCCAACGCCCCTCCTCCGCCGCAGATTCGCCCGAAACTGGTGTGTTTCTTGATTACAACTACAATGATAATTTCCCTGTATTCCAATTTCCATTATTAGGGGCCGGAATTGTGGATATTAGAGAAGATGAAGGGGGGCGGGGTAGTGGTTCCACCCACGACACAAAAATTTTAGCTCCTGGTTCCAATTTTGTCCTTTTATTTCCAATAATTGAAAAGCAAAACTCATCTACCCATGGCTGCTATCCGATCTGGGAAGGTTTTGTCAGACTTGTCAAAATTGGAACCACTCGACGGATCCAACTACCGCCGATGGTCACAAAAGTTACTGATTTTCTTAGAGCAATTGGTGATCGACTACATCTCACTGCTGCTCAGCCCGCTGCCACTGCCACCGCTACAGCCACTACCACTATCGTTGCCGCCACTGTCGTTTCCATCACTGCAGCCGTCACTGATCCGCCTACCGTTGTCGCTGCCACCATTTCAGCTGTCGCTGCTGATCCCAAGACGTCTACTGCCACTACCGTCGAAACTGACAAATTCGAGAGAGACAACAAAATGGACGACAAAATGATGATGGATCAGGTTCATGAGTACGAGAATCTAGTGGCAAGTGTGCTGTCTGAAGGCACGAAGATGTGCGCGATTCTCCAGGCCAACTTGTTGCTCGAGAAATTTCCTTCTTCCTGGAATGATTACCGCAACCACTTGAAACATAAGAAGAAGGACCTGACTCTACAAGAACTTATCAGTCTCGTGCGCACGGAGGAAGCCAACAGGGTAAAGGATAAGCTCTCTTTTCAATCCCTAAGTTCAATTAAAGCTAATTTAGTTGAATATTCTAGTGCTTCGAAAGATAGGTTCAAAAACAAAGGGAAGCAAATTGCAAAGGATAGAGCTCAAAAGAACAAAGGTCTCCAACCAAAAAATACTAATGGAAGAATCAAGAAATCGAAACTGGTATGCTATGTCTGTGGAAAACCCGGGCACAAATCCTATAAGTGCACCCAGAAAAAAGATAGGAAAGATCAAAGGGCTACACCACAACCCAACCTTGTAAAGACGGACAACATCATTGCTGTCATGGTTGTGGAAGCAAATCCGGACCATTTGGGAGTGCAAATTAATCAAAAGAAGCAAAAAGACGGAAAAACCATCATGGGAGGCGCGAGGCGCCTGGGAAGCCTGCAGAAAAACTGGTTTTCTTCCAACTTTGCCCTTAATGAAACGCGTCTTCCAATGCGTTTTGGTGGTTCCAACCGATGCATACGTGTAGAAGAAGTGTTCCACTATCAGTTTGAGCACGATTTGGATTTAGAGAAGGCCACTGTAAGTCTTAACAAGTCAATACTGAAAAAGTTGCTTATTTGCATTGTTGAGTGGTTAAACCGAGGAGAGGAGCGCCTTAGACATAAGGGTTCCGCTTAA

Protein sequence

MRKNGQIRHFIHRPSKAYTAGTGKRRKVQSEEEGIDTRGQKTGKTRAVTDSGGGAVMGFKKILVLYSNLREGEEGPKDQRQRPSSAADSPETGVFLDYNYNDNFPVFQFPLLGAGIVDIREDEGGRGSGSTHDTKILAPGSNFVLLFPIIEKQNSSTHGCYPIWEGFVRLVKIGTTRRIQLPPMVTKVTDFLRAIGDRLHLTAAQPAATATATATTTIVAATVVSITAAVTDPPTVVAATISAVAADPKTSTATTVETDKFERDNKMDDKMMMDQVHEYENLVASVLSEGTKMCAILQANLLLEKFPSSWNDYRNHLKHKKKDLTLQELISLVRTEEANRVKDKLSFQSLSSIKANLVEYSSASKDRFKNKGKQIAKDRAQKNKGLQPKNTNGRIKKSKLVCYVCGKPGHKSYKCTQKKDRKDQRATPQPNLVKTDNIIAVMVVEANPDHLGVQINQKKQKDGKTIMGGARRLGSLQKNWFSSNFALNETRLPMRFGGSNRCIRVEEVFHYQFEHDLDLEKATVSLNKSILKKLLICIVEWLNRGEERLRHKGSA

Homology

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BLAST of Moc11g28300 vs. NCBI nr
Match: XP_022156023.1 (uncharacterized protein LOC111022991 [Momordica charantia])

HSP 1 Score: 279.6 bits (714), Expect = 5.7e-71
Identity = 144/180 (80.00%), Postives = 158/180 (87.78%), Query Frame = 0


Query: 268 DDKMMMDQVHEYENLVASVLSEGTKMCAILQANLLLEKFPSSWNDYRNHLKHKKKDLTLQ 327
           DDK +MDQVHEYENLVASVL EG KMC ILQAN+LLEKF  SWNDYRNHL+HKKKDLTLQ
Sbjct: 28  DDKPLMDQVHEYENLVASVLFEGMKMCEILQANVLLEKFXPSWNDYRNHLEHKKKDLTLQ 87

Query: 328 ELISLVRTEEANRVKDKLSFQSLSSIKANLVEYSSASKDRFKNKGKQIAKDRAQKNKGLQ 387
           ELIS V TEEANR+KDKLS QSL+S+K NLVE SSASKDRFK KGK IA+DRAQKNKGL+
Sbjct: 88  ELISHVLTEEANRLKDKLSSQSLNSVKVNLVESSSASKDRFKRKGKPIARDRAQKNKGLR 147

Query: 388 PKNTNGRIKKSKLVCYVCGKPGHKSYKCTQKKDRKDQRATPQPNLVKTDNIIAVMVVEAN 447
           PKN  GR++K KLVCYVC KPGHKSY+CTQKKDRKDQR  PQ N+V+T NIIA +VVEAN
Sbjct: 148 PKNIGGRMEKXKLVCYVCEKPGHKSYQCTQKKDRKDQRIAPQANIVETXNIIAXVVVEAN 207

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BLAST of Moc11g28300 vs. NCBI nr
Match: XP_022152111.1 (uncharacterized protein LOC111019900 [Momordica charantia])

HSP 1 Score: 237.3 bits (604), Expect = 3.2e-58
Identity = 148/258 (57.36%), Postives = 166/258 (64.34%), Query Frame = 0


Query: 205 QPAATATATATTTIVAATVVSITAAVTDPPTVVAATISAVAADPKTSTATTVETDKFERD 264
           QP A  TA  T    A    ++TA VT P T+VA T+S  A  P TS  T VE DKFE+D
Sbjct: 76  QPVAVTTAATTIAAAATITATVTATVTGPLTIVATTVSVAATVPGTS--TVVEADKFEKD 135

Query: 265 NK-------------------------------------------------------MDD 324
           NK                                                        DD
Sbjct: 136 NKTILGHLLNHMNNSLFYLFVVQKSAKIIWDMFESRYGGDDADRRKYVVGKWLEFQMSDD 195

Query: 325 KMMMDQVHEYENLVASVLSEGTKMCAILQANLLLEKFPSSWNDYRNHLKHKKKDLTLQEL 384
           + +M+QVHEYENLVASVLS+G KMC ILQAN+LLEKFP SW+DY NHLKHKKKDLTLQEL
Sbjct: 196 ESVMNQVHEYENLVASVLSKGMKMCEILQANVLLEKFPYSWSDYHNHLKHKKKDLTLQEL 255

Query: 385 ISLVRTEEANRVKDKLSFQSLSSIKANLVEYSSASKDRFKNKGKQIAKDRAQKNKGLQPK 408
           IS VRTEEANR+KDKL FQSL+S+KANLVE SSASKD FKNKGKQIAKD+A+KNKGL+PK
Sbjct: 256 ISHVRTEEANRLKDKLFFQSLNSVKANLVESSSASKDGFKNKGKQIAKDKAKKNKGLKPK 315

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BLAST of Moc11g28300 vs. NCBI nr
Match: TYK04394.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 219.9 bits (559), Expect = 5.4e-53
Identity = 115/180 (63.89%), Postives = 139/180 (77.22%), Query Frame = 0


Query: 268 DDKMMMDQVHEYENLVASVLSEGTKMCAILQANLLLEKFPSSWNDYRNHLKHKKKDLTLQ 327
           DDK +M+Q+HEYENLVA+VLSEG KMC ILQAN+LLEKFP SWNDYRNHLKHKKKDL LQ
Sbjct: 152 DDKPVMEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQ 211

Query: 328 ELISLVRTEEANRVKDKLSFQSLSSIKANLVEYSSASKDRFKNKGKQIAKDRAQKNKGLQ 387
           ELIS +RTEEANR+KDKL+ Q+L+S+ ANLVE S  ++DR K +     K+  ++    Q
Sbjct: 212 ELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRTKQEKGHKGKNSEKR----Q 271

Query: 388 PKNTNGRIKKSKLVCYVCGKPGHKSYKCTQKKDRKDQRATPQPNLVKTDNIIAVMVVEAN 447
            K T G+IKK KLVCYVCGK GHKSY+C Q+K R  Q+ TPQ NL + D+ I   +VEAN
Sbjct: 272 FKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEAN 327

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BLAST of Moc11g28300 vs. NCBI nr
Match: KAA0051006.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 219.9 bits (559), Expect = 5.4e-53
Identity = 115/180 (63.89%), Postives = 139/180 (77.22%), Query Frame = 0


Query: 268 DDKMMMDQVHEYENLVASVLSEGTKMCAILQANLLLEKFPSSWNDYRNHLKHKKKDLTLQ 327
           DDK +M+Q+HEYENLVA+VLSEG KMC ILQAN+LLEKFP SWNDYRNHLKHKKKDL LQ
Sbjct: 152 DDKPVMEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQ 211

Query: 328 ELISLVRTEEANRVKDKLSFQSLSSIKANLVEYSSASKDRFKNKGKQIAKDRAQKNKGLQ 387
           ELIS +RTEEANR+KDKL+ Q+L+S+ ANLVE S  ++DR K +     K+  ++    Q
Sbjct: 212 ELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRTKQEKGHKGKNSEKR----Q 271

Query: 388 PKNTNGRIKKSKLVCYVCGKPGHKSYKCTQKKDRKDQRATPQPNLVKTDNIIAVMVVEAN 447
            K T G+IKK KLVCYVCGK GHKSY+C Q+K R  Q+ TPQ NL + D+ I   +VEAN
Sbjct: 272 FKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEAN 327

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BLAST of Moc11g28300 vs. NCBI nr
Match: KAA0042223.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 219.5 bits (558), Expect = 7.0e-53
Identity = 115/180 (63.89%), Postives = 138/180 (76.67%), Query Frame = 0


Query: 268 DDKMMMDQVHEYENLVASVLSEGTKMCAILQANLLLEKFPSSWNDYRNHLKHKKKDLTLQ 327
           DDK +++Q+HEYENLVA+VLSEG KMC ILQAN+LLEKFP SWNDYRNHLKHKKKDL LQ
Sbjct: 152 DDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQ 211

Query: 328 ELISLVRTEEANRVKDKLSFQSLSSIKANLVEYSSASKDRFKNKGKQIAKDRAQKNKGLQ 387
           ELIS +RTEEANR+KDKL  Q+L+S+ ANLVE S  ++D    K KQ    + + +K  Q
Sbjct: 212 ELISHMRTEEANRLKDKLDSQNLNSVNANLVESSFVNRD----KTKQEKGHKGKNSKNRQ 271

Query: 388 PKNTNGRIKKSKLVCYVCGKPGHKSYKCTQKKDRKDQRATPQPNLVKTDNIIAVMVVEAN 447
            K T G+IKK KLVCYVCGK GHKSY+C Q+K R  Q+ TPQ NL + D+ I   +VEAN
Sbjct: 272 FKTTRGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEAN 327

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BLAST of Moc11g28300 vs. ExPASy Swiss-Prot
Match: F4HY61 (NAC domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=NAC010 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.1e-15
Identity = 44/66 (66.67%), Postives = 50/66 (75.76%), Query Frame = 0


Query: 3   KNGQIRHFIHRPSKAYTAGTGKRRKVQSEEEGIDTRGQKTGKTRAVTDSGGGAVMGFKKI 62
           K+GQ+RHF HRPSKAYT GT KRRKV ++EEG +TR  KTGKTR V    G    GFKKI
Sbjct: 135 KDGQVRHFFHRPSKAYTTGTRKRRKVSTDEEGHETRWHKTGKTRPVLSQSGET--GFKKI 194

Query: 63  LVLYSN 69
           LVLY+N
Sbjct: 195 LVLYTN 198

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BLAST of Moc11g28300 vs. ExPASy Swiss-Prot
Match: O49459 (NAC domain-containing protein 73 OS=Arabidopsis thaliana OX=3702 GN=NAC073 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.3e-13
Identity = 42/69 (60.87%), Postives = 51/69 (73.91%), Query Frame = 0


Query: 1   MRKNGQIRHFIHRPSKAYTAGTGKRRKVQSEEE-GIDTRGQKTGKTRAVTDSGGGAVMGF 60
           + K+G +RHF HRPSKAYT GT KRRKV ++ + G +TR  KTGKTR V    GG V G+
Sbjct: 115 VNKDGTVRHFFHRPSKAYTTGTRKRRKVHTDSDVGGETRWHKTGKTRPVL--AGGRVRGY 174

Query: 61  KKILVLYSN 69
           KKILVLY+N
Sbjct: 175 KKILVLYTN 181

[Close]

BLAST of Moc11g28300 vs. ExPASy Swiss-Prot
Match: Q9M0F8 (NAC domain-containing protein 75 OS=Arabidopsis thaliana OX=3702 GN=NAC075 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.9e-09
Identity = 40/83 (48.19%), Postives = 49/83 (59.04%), Query Frame = 0


Query: 3   KNGQIRHFIHRPSKAYTAGTGKRRKVQSE--------EEGIDTRGQKTGKTRAVTDSGGG 62
           ++G  RHF HRPSKAYT GT KRRK+Q+E            +TR  KTGKTR V  +  G
Sbjct: 106 RDGLSRHFFHRPSKAYTTGTRKRRKIQTECDNNLQGSSSSGETRWHKTGKTRPVMVN--G 165

Query: 63  AVMGFKKILVLYSNLREGEEGPK 78
              G KKILVLY+N  +  +  K
Sbjct: 166 KQKGCKKILVLYTNFGKNRKPEK 186

[Close]

BLAST of Moc11g28300 vs. ExPASy Swiss-Prot
Match: Q6NQK2 (SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.1e-05
Identity = 29/66 (43.94%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 1   MRKNGQIRHFIHRPSKAYTAGTGKRRKVQSEEEGIDTRGQKTGKTRAVTDSGGGAVMGFK 60
           ++ +G + HF H+  KAY+ GT KRRK+  ++ G D R  KTG+T+ V     G   G K
Sbjct: 114 VKSDGTVSHFFHKAIKAYSTGTRKRRKIHDDDFG-DVRWHKTGRTKPVVLD--GVQRGCK 173

Query: 61  KILVLY 67
           KI+VLY
Sbjct: 174 KIMVLY 176

[Close]

BLAST of Moc11g28300 vs. ExPASy TrEMBL
Match: A0A6J1DPG7 (uncharacterized protein LOC111022991 OS=Momordica charantia OX=3673 GN=LOC111022991 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 2.8e-71
Identity = 144/180 (80.00%), Postives = 158/180 (87.78%), Query Frame = 0


Query: 268 DDKMMMDQVHEYENLVASVLSEGTKMCAILQANLLLEKFPSSWNDYRNHLKHKKKDLTLQ 327
           DDK +MDQVHEYENLVASVL EG KMC ILQAN+LLEKF  SWNDYRNHL+HKKKDLTLQ
Sbjct: 28  DDKPLMDQVHEYENLVASVLFEGMKMCEILQANVLLEKFXPSWNDYRNHLEHKKKDLTLQ 87

Query: 328 ELISLVRTEEANRVKDKLSFQSLSSIKANLVEYSSASKDRFKNKGKQIAKDRAQKNKGLQ 387
           ELIS V TEEANR+KDKLS QSL+S+K NLVE SSASKDRFK KGK IA+DRAQKNKGL+
Sbjct: 88  ELISHVLTEEANRLKDKLSSQSLNSVKVNLVESSSASKDRFKRKGKPIARDRAQKNKGLR 147

Query: 388 PKNTNGRIKKSKLVCYVCGKPGHKSYKCTQKKDRKDQRATPQPNLVKTDNIIAVMVVEAN 447
           PKN  GR++K KLVCYVC KPGHKSY+CTQKKDRKDQR  PQ N+V+T NIIA +VVEAN
Sbjct: 148 PKNIGGRMEKXKLVCYVCEKPGHKSYQCTQKKDRKDQRIAPQANIVETXNIIAXVVVEAN 207

[Close]

BLAST of Moc11g28300 vs. ExPASy TrEMBL
Match: A0A6J1DGM8 (uncharacterized protein LOC111019900 OS=Momordica charantia OX=3673 GN=LOC111019900 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.6e-58
Identity = 148/258 (57.36%), Postives = 166/258 (64.34%), Query Frame = 0


Query: 205 QPAATATATATTTIVAATVVSITAAVTDPPTVVAATISAVAADPKTSTATTVETDKFERD 264
           QP A  TA  T    A    ++TA VT P T+VA T+S  A  P TS  T VE DKFE+D
Sbjct: 76  QPVAVTTAATTIAAAATITATVTATVTGPLTIVATTVSVAATVPGTS--TVVEADKFEKD 135

Query: 265 NK-------------------------------------------------------MDD 324
           NK                                                        DD
Sbjct: 136 NKTILGHLLNHMNNSLFYLFVVQKSAKIIWDMFESRYGGDDADRRKYVVGKWLEFQMSDD 195

Query: 325 KMMMDQVHEYENLVASVLSEGTKMCAILQANLLLEKFPSSWNDYRNHLKHKKKDLTLQEL 384
           + +M+QVHEYENLVASVLS+G KMC ILQAN+LLEKFP SW+DY NHLKHKKKDLTLQEL
Sbjct: 196 ESVMNQVHEYENLVASVLSKGMKMCEILQANVLLEKFPYSWSDYHNHLKHKKKDLTLQEL 255

Query: 385 ISLVRTEEANRVKDKLSFQSLSSIKANLVEYSSASKDRFKNKGKQIAKDRAQKNKGLQPK 408
           IS VRTEEANR+KDKL FQSL+S+KANLVE SSASKD FKNKGKQIAKD+A+KNKGL+PK
Sbjct: 256 ISHVRTEEANRLKDKLFFQSLNSVKANLVESSSASKDGFKNKGKQIAKDKAKKNKGLKPK 315

[Close]

BLAST of Moc11g28300 vs. ExPASy TrEMBL
Match: A0A5A7U9X9 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G00270 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 2.6e-53
Identity = 115/180 (63.89%), Postives = 139/180 (77.22%), Query Frame = 0


Query: 268 DDKMMMDQVHEYENLVASVLSEGTKMCAILQANLLLEKFPSSWNDYRNHLKHKKKDLTLQ 327
           DDK +M+Q+HEYENLVA+VLSEG KMC ILQAN+LLEKFP SWNDYRNHLKHKKKDL LQ
Sbjct: 152 DDKPVMEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQ 211

Query: 328 ELISLVRTEEANRVKDKLSFQSLSSIKANLVEYSSASKDRFKNKGKQIAKDRAQKNKGLQ 387
           ELIS +RTEEANR+KDKL+ Q+L+S+ ANLVE S  ++DR K +     K+  ++    Q
Sbjct: 212 ELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRTKQEKGHKGKNSEKR----Q 271

Query: 388 PKNTNGRIKKSKLVCYVCGKPGHKSYKCTQKKDRKDQRATPQPNLVKTDNIIAVMVVEAN 447
            K T G+IKK KLVCYVCGK GHKSY+C Q+K R  Q+ TPQ NL + D+ I   +VEAN
Sbjct: 272 FKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEAN 327

[Close]

BLAST of Moc11g28300 vs. ExPASy TrEMBL
Match: A0A5D3BZI1 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00770 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 2.6e-53
Identity = 115/180 (63.89%), Postives = 139/180 (77.22%), Query Frame = 0


Query: 268 DDKMMMDQVHEYENLVASVLSEGTKMCAILQANLLLEKFPSSWNDYRNHLKHKKKDLTLQ 327
           DDK +M+Q+HEYENLVA+VLSEG KMC ILQAN+LLEKFP SWNDYRNHLKHKKKDL LQ
Sbjct: 152 DDKPVMEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQ 211

Query: 328 ELISLVRTEEANRVKDKLSFQSLSSIKANLVEYSSASKDRFKNKGKQIAKDRAQKNKGLQ 387
           ELIS +RTEEANR+KDKL+ Q+L+S+ ANLVE S  ++DR K +     K+  ++    Q
Sbjct: 212 ELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRTKQEKGHKGKNSEKR----Q 271

Query: 388 PKNTNGRIKKSKLVCYVCGKPGHKSYKCTQKKDRKDQRATPQPNLVKTDNIIAVMVVEAN 447
            K T G+IKK KLVCYVCGK GHKSY+C Q+K R  Q+ TPQ NL + D+ I   +VEAN
Sbjct: 272 FKTTGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEAN 327

[Close]

BLAST of Moc11g28300 vs. ExPASy TrEMBL
Match: A0A5A7TMS2 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G002600 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 3.4e-53
Identity = 114/180 (63.33%), Postives = 139/180 (77.22%), Query Frame = 0


Query: 268 DDKMMMDQVHEYENLVASVLSEGTKMCAILQANLLLEKFPSSWNDYRNHLKHKKKDLTLQ 327
           DDK +++Q+HEYENLVA+VLSEG KMC ILQAN+LLEKFP  WNDYRNHLKHKKKDL LQ
Sbjct: 152 DDKPVVEQIHEYENLVANVLSEGMKMCEILQANVLLEKFPPCWNDYRNHLKHKKKDLKLQ 211

Query: 328 ELISLVRTEEANRVKDKLSFQSLSSIKANLVEYSSASKDRFKNKGKQIAKDRAQKNKGLQ 387
           ELIS +RTEEANR+KDKL+FQ+L+S+ ANLVE S  ++DR K +     K+  ++    Q
Sbjct: 212 ELISHMRTEEANRLKDKLAFQNLNSVNANLVESSFVNRDRTKQEKGHKGKNSEKR----Q 271

Query: 388 PKNTNGRIKKSKLVCYVCGKPGHKSYKCTQKKDRKDQRATPQPNLVKTDNIIAVMVVEAN 447
            K T G+IKK KLVCYVCGK GHKSY+C Q+K R  Q+ TPQ NL + D+ I   +VEAN
Sbjct: 272 FKTTRGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEAN 327

[Close]

BLAST of Moc11g28300 vs. TAIR 10
Match: AT1G28470.1 (NAC domain containing protein 10 )

HSP 1 Score: 85.5 bits (210), Expect = 1.5e-16
Identity = 44/66 (66.67%), Postives = 50/66 (75.76%), Query Frame = 0


Query: 3   KNGQIRHFIHRPSKAYTAGTGKRRKVQSEEEGIDTRGQKTGKTRAVTDSGGGAVMGFKKI 62
           K+GQ+RHF HRPSKAYT GT KRRKV ++EEG +TR  KTGKTR V    G    GFKKI
Sbjct: 135 KDGQVRHFFHRPSKAYTTGTRKRRKVSTDEEGHETRWHKTGKTRPVLSQSGET--GFKKI 194

Query: 63  LVLYSN 69
           LVLY+N
Sbjct: 195 LVLYTN 198

[Close]

BLAST of Moc11g28300 vs. TAIR 10
Match: AT4G28500.1 (NAC domain containing protein 73 )

HSP 1 Score: 78.2 bits (191), Expect = 2.3e-14
Identity = 42/69 (60.87%), Postives = 51/69 (73.91%), Query Frame = 0


Query: 1   MRKNGQIRHFIHRPSKAYTAGTGKRRKVQSEEE-GIDTRGQKTGKTRAVTDSGGGAVMGF 60
           + K+G +RHF HRPSKAYT GT KRRKV ++ + G +TR  KTGKTR V    GG V G+
Sbjct: 115 VNKDGTVRHFFHRPSKAYTTGTRKRRKVHTDSDVGGETRWHKTGKTRPVL--AGGRVRGY 174

Query: 61  KKILVLYSN 69
           KKILVLY+N
Sbjct: 175 KKILVLYTN 181

[Close]

BLAST of Moc11g28300 vs. TAIR 10
Match: AT4G29230.1 (NAC domain containing protein 75 )

HSP 1 Score: 65.1 bits (157), Expect = 2.1e-10
Identity = 40/83 (48.19%), Postives = 49/83 (59.04%), Query Frame = 0


Query: 3   KNGQIRHFIHRPSKAYTAGTGKRRKVQSE--------EEGIDTRGQKTGKTRAVTDSGGG 62
           ++G  RHF HRPSKAYT GT KRRK+Q+E            +TR  KTGKTR V  +  G
Sbjct: 106 RDGLSRHFFHRPSKAYTTGTRKRRKIQTECDNNLQGSSSSGETRWHKTGKTRPVMVN--G 165

Query: 63  AVMGFKKILVLYSNLREGEEGPK 78
              G KKILVLY+N  +  +  K
Sbjct: 166 KQKGCKKILVLYTNFGKNRKPEK 186

[Close]

BLAST of Moc11g28300 vs. TAIR 10
Match: AT5G56620.1 (NAC domain containing protein 99 )

HSP 1 Score: 58.5 bits (140), Expect = 1.9e-08
Identity = 38/81 (46.91%), Postives = 48/81 (59.26%), Query Frame = 0


Query: 3   KNGQIRHFIHRPSKAYTAGTGKRRKV-----QSEEEG-IDTRGQKTGKTRAVTDSGGGAV 62
           ++G  +HF H+PS+AYT GT KRRK+      SE  G  +TR  KTGKTR V  +  G  
Sbjct: 106 RDGLSKHFFHKPSRAYTTGTRKRRKIIQTDHDSELTGSSETRWHKTGKTRPVMIN--GQQ 165

Query: 63  MGFKKILVLYSNLREGEEGPK 78
            G KKILVLY+N  +     K
Sbjct: 166 RGCKKILVLYTNFGKNRRPEK 184

[Close]

BLAST of Moc11g28300 vs. TAIR 10
Match: AT1G25580.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 8.1e-07
Identity = 29/66 (43.94%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 1   MRKNGQIRHFIHRPSKAYTAGTGKRRKVQSEEEGIDTRGQKTGKTRAVTDSGGGAVMGFK 60
           ++ +G + HF H+  KAY+ GT KRRK+  ++ G D R  KTG+T+ V     G   G K
Sbjct: 114 VKSDGTVSHFFHKAIKAYSTGTRKRRKIHDDDFG-DVRWHKTGRTKPVVLD--GVQRGCK 173

Query: 61  KILVLY 67
           KI+VLY
Sbjct: 174 KIMVLY 176

The following BLAST results are available for this feature:

BLAST of Moc11g28300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156023.1	5.7e-71	80.00	uncharacterized protein LOC111022991 [Momordica charantia]	[more]
XP_022152111.1	3.2e-58	57.36	uncharacterized protein LOC111019900 [Momordica charantia]	[more]
TYK04394.1	5.4e-53	63.89	ty1-copia retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0051006.1	5.4e-53	63.89	ty1-copia retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0042223.1	7.0e-53	63.89	ty1-copia retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Moc11g28300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HY61	2.1e-15	66.67	NAC domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=NAC010 PE=2 ...	[more]
O49459	3.3e-13	60.87	NAC domain-containing protein 73 OS=Arabidopsis thaliana OX=3702 GN=NAC073 PE=2 ...	[more]
Q9M0F8	2.9e-09	48.19	NAC domain-containing protein 75 OS=Arabidopsis thaliana OX=3702 GN=NAC075 PE=2 ...	[more]
Q6NQK2	1.1e-05	43.94	SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1	[more]

BLAST of Moc11g28300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DPG7	2.8e-71	80.00	uncharacterized protein LOC111022991 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DGM8	1.6e-58	57.36	uncharacterized protein LOC111019900 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A5A7U9X9	2.6e-53	63.89	Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3BZI1	2.6e-53	63.89	Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7TMS2	3.4e-53	63.33	Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of Moc11g28300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28470.1	1.5e-16	66.67	NAC domain containing protein 10	[more]
AT4G28500.1	2.3e-14	60.87	NAC domain containing protein 73	[more]
AT4G29230.1	2.1e-10	48.19	NAC domain containing protein 75	[more]
AT5G56620.1	1.9e-08	46.91	NAC domain containing protein 99	[more]
AT1G25580.1	8.1e-07	43.94	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 401..417 e-value: 0.003 score: 26.7
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 401..417 e-value: 3.8E-4 score: 20.4
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 402..417 score: 9.553822
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 368..384
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 368..392
None	No IPR available	PANTHER	PTHR31079:SF20	NAC DOMAIN-CONTAINING PROTEIN 10	coord: 2..69
IPR044799	NAC domain-containing protein SOG1-like	PANTHER	PTHR31079	NAC DOMAIN-CONTAINING PROTEIN 73	coord: 2..69
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 386..424

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g28300.1	Moc11g28300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding