Moc11g17000 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc11g17000
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Locationchr11: 13036535 .. 13042344 (+)
RNA-Seq ExpressionMoc11g17000
SyntenyMoc11g17000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCAGCTCCATGGCGTTGTAGGGACAACACACAGCGCCACGACGCTGTGCAGCGCCATGGCACCATGCTTAGTGTCCCGGCGCTGCTACTGCGGCTTTCTGCTACAGCAACGCCATGGCGCTGCCCTTAGGCGCAGAGGCGCTGTCCCAGGTGTTTTTCGACATGTTTTCGTGGCTCCGGTTCGTGGTTTGAGGGCGGTTGCGGTCGTTTTCTTATTTTTTGTATTATTTTGCTTTCTTATGGTGCCAATGTAACAACCGAAATATATATATATATATAAATATATATATTTAAATTATTATTTTTATTTAGTTGTTTTCTTTATTTTCTAAAAAAAAATAAATTTTTGATTTAAAAATTATTTTTAAAAGATAATTTGTTCTTAGAATTTGAAAAAAAAAGAGTTTTATTAAATCTTTATCTTTTTATTATCCTTTTTAAATAAGGATTCATTAGGGTTTGTTATTAAAGCCCTTAAAAAGTTTTATTTTCTTAAACTGTTAGACCTAGTTTTCTCTCAAAGAGAAAAAGAAAACAAAAGAAGAAGAGTTTTGGTATTTTCTCTCAAAGATCGGTAAGATTTTCTTCCACATTGTTTTAGTTTTATTTTTCTTTGATTTGTAGTTCTTTAATTCAGTTTATTGGGAAAAGTTTTGAGGTCTTTGTTTTTTAGAATAAAAGATTTTAACGACTTTTGCCCTAAAAATTTTCCAGAATTTTTGGTTTGAATCTTTTTGTTTATGAGATTGTTTTTGAGCTATTTTGAGACTCTTTTTGCATAAAAAGTTTACCTATTTGTATCCTATAAATTATAGTTTGTTGTTATGATTTTTACATGAAAAATTATATGTTTTTACCGAGTTTTAAAGGTTTTTTTTTTGTGTCAAAGTAGGACTTGTCCTTATCTTTTGTCATAGTATCGTATTAAATAAAGAAGTCTTTCCGTTAATTTAGTGTTTAGTTGTTTACGCTTCCGCATTTTGTCAGAATGACCGTATTGGAAAATACGGGTTGTTACAGCCAAAAACCAGTTCAACTTTGCTATTTAATTATTTTATGCATTATCGTGGCTCCGGTTCGCAGTTCGAGGGCGGTTGCGGTTGTTTTCTTTTTTTTTTTTGTAGTATTTTGCTTTCTTAATTAGTGTGCCAAAAACCAGTCCAACTTTGCCATTTAATTATTTTATGCATTATGAATGTGTATTTTAATTAAAAGCATATTGCATATTGTATGTCATATAGTTTTAAAATCCCACCATAGGCTACATGCATAATATGTATGTTTGATATGTAGTATGTATGTATGATCATGCATCATATAGTTATAAATGTTATAATGTATGAATGCATGTTTTATTTTCATGATTAATATAAGTTTTGTATTAATTAGATGAAAATAAAGATGCATTGAGCATGACATTACTTTAATTAATATAATTGTTATATTAATGTATGCTTGCAATGCATGATTATAGTTTCAATTTCTTAAATTTTTTAAGAGTTATAAAATTTGGTAGATAGAAATTAAAATCTATAATAAAAAATTGCATGCAAACATAGGATCTAAGTTAATTAATTTTAAAGGGGTTTAAAATTAATCAGACCTTAGGTTATATCTTCTAATATGATTAGGGGTAGTCTTTTATTTTGTTTTAACTAGGTTTAAAATGAGATGATAAAAGACTAAATATAAAATATTGCTTATAAGGGAACCTTGTCTAAGGAAGGTTCTGTCTAGGTTAAGGTATTTAAGCTGACCGTAAGGGAACACCTCTACCTGGGAACCGACTTGGGGGTTGAATTAGTCAATATTTTATATGTGTAAAGACCCAAATTTCTGACACGTTTAACAAAGTAAATACCCTATAATGCTTACTGAACCTTCCCATTTAAGGTAACAAAAATGTATTGTTCTCCTAATGCAACATGCAGAATAGTGGTACACAAAATGGAATATCCAGGAGATAATACCCGCCTCAGTGGTCAGGAATCCAATCAAGAAAAATAATCGTTTTGTCTTGAAATCCCAAATACATCAGTAATTCAAATAGTAAAAGAAAATATCCATAAAGCAATAAGAGAAAGTGTCCTTTGAGTTAACCCAATGTCTAATTCCCCTTTTTATTTCATAGCAGTAAGATTTAAGCGATGTCTACATTGCCCGACATTATTCCCTAGCCTAACCGACGCAACTAGTGATCCCGCCTCAGTCAGACCTCCTGTACGTCATCACCACGGTCGGCCCGGTTCGCACCTGAAACAAATAAGGTAGAGGGGTGGGGGGGTGAGTACATAAATACTCCGTAAGTAGCCCACCCTAACTAAACACCACAACACGCTCGTAATCACAACCACATCAAAAGAAACAATCGCAGAACAAACAGATAGGCAGCATTGGATAATAATAATAGATTAACAATTCCATACAAGCAACCCAACGCCTAGACTTCCGGGACTCCAACCACACGACCCACTAGCCTTTCTCCATACTTGAACTAACACTCACTCCCACCCTATGTTAGTACTCCAAGTCTAACTTTTCGAGGCGTAACGGCTCTTGACATTTATTCCCAAGATACCGACCTCCCTCTACGACGTTTGGTGTTCGACCTTGCCATTTATCCCCAAGGTCTAGAACTGTTACTCTTAAGCACCCCTTCACGTTAGTCCTCCGAGTCTAACTCCTTGAGTCATTTTGTCCCTTGACATTTATTCCCAAGGCCCCAATACTTCTCTACAGAAACTTGAAGTTCGACCTTGCCATTTATTCCCAAGGTCTAAAAACTGTGCACCAGTCCTTGACATTTATTCCCAAGGTACCGATGACTACCCGGCGTATTGGTTCTTGACATTTATTCCCAAGACCCCAATACTTCTCCATAGAAACCTGATGTTCGGCCTTGCCATTTATTCCCAAGGCACCCACTCAAAGCTTTGAATAACCATGTGACTAGTATGCATTTTCAATCCAGACACCCCACAGGTTAACGAACCACTAACCCGACCCATCGCTCGTGACCATTCCCACTAATCTTCCAAAGACAACCTATAAGTAAGTCTTCCACATTTCAATTCACAGCTCAATTTTACCAGCATGCTTTTCTTCGTACCAAACAATACACTAACTCAGTAGCTTCCAACAAAATAATATAAAACTATATAACAGGCTATCAACACATGCATTTCGTCTCCGACATGTTTACAAACGTCATGGGTTAGCTACTTCCAACTACAATAATCAGAACTGACCAACCACAACCAACAACAAGAATTCATGCATGCTCATAATGTCTAGCAATGAAACAACAACACGTAACGCAACGATAACCACTAAGAGTTCACAAACCACGGCTAACAATTTTCTAATGCACAAAATAAATTATTCTAATTAAAAATCAGCACCAAAACCATTCAACTAATTAAAAATCAGCACCAAAAATCATTCCGTTAACACTAAATAACACACGCACTCGCCCCCTGGTGCTACTTACTCACTGCTATGCTCCTATATCTCGCGTCAACTCACCACCTAAACAACAATAGACAACGAAATAATTAATACAAAATTTCCAGCCGTCTAAATTCATTCTAAAAGATCTTGCAATGTCCATTACCGCAAAAATCGACTTCGTCTAGGTGCGGGTAACTCAGGCCTAACTCGAATAATGGTGGGTTGCGTAAATCGAGCCTCTAATGGTTGTGGGTAGGTGCCGGGATCGGAAACTGCTGCTGTCTGGACTATTTTAACAGTAAAAATTCACCAAAACGATGCCCACAACGCTGTGTACAGCAAGGACCCGCGCCACGACCCGCTGCTACAGGAATCCACGCACCACCGCTGCTGTCCGACGTCGCGCACCACCGCCGCCGCCCGACACCCGCGCACCGCTGCCGCCGACGCCCGCGCACCGCTGCTGCCCAACGTCCGAGAACTGCTGCTGCCCGACGCCCGACGTTCGCGAACTGCTGCTGCCCGACACCGCACGCCGCCGCTGCCGAAGTCGCCGCCGCCGTTGCCCGCCACGCCGCCTGCTGCCGCTGTTGTCAAACCGCCGGTGGTCGGCGTGTATCGGGAAGGGTTGAGGCGCCTGTAGAAGGAGGGAAACGAAAACTAAAACGGTGGAAAATGAGGGGTTCACGAATGAGAGGGGTCTTTTTGGGGGCTAGGGTTTTCTCCTTTTGTTTTTACAAGAAGGGACCCACTTGGGCTAGGTTCTTTTCTTTCTCCCTCTTGTTTTAAAATAAGGGAGGTCCACTTACTTAGATACTTAATTTGGGCCCAACAGACCAGAACAATTATAGAGAAAAACCATCCCCTCGTTACCCAATAATTAGATACGTAAGTACATCTCAACACTCATAGCAATTACCACAGCAGCTCAAAATAAAATGAAATGAACAATGAAATTAACTAAAAAGAAATTTCTAAGAAAAGAGGCCCGGAGACTCGAGGGTAACTAACCTGAGTAACGCGGGGCGTTACAATATGCATGCAATAATGTCTTTAGTTTATTAAATCGTTTAATAAACTAAAACATTAATGTACAACTACCAATATAATAGTTATATTGGGCCGACTAAAAATTCACTTAGTTAATTTCACTTAGCCGGAATTTATCTAAGTAATATACCCTAGTCTTAGAATACTAAGTGGGAGCAAAAGATAATATGTAATATACTGTGTATATATTTGATATACAAAGTATATATAACATACTTTTTTCTCTCTCTCACGTTCTCCTTTATATTCACACTGTGAGTTCCATGCTCGGCCTCCCTACGGAAGGTGTTTGCATGGTTCAATATCAAGGTACTGAATGGAGATAGTATTCATCGTAAGCGGGAGAAGGACGTGTGACAACACATCCAGCGGTCTCCGCCATTGGTTTGCACCGTGAGGTTTCATACATGACCCGTGTGTCGTCCTGAAGCGACCATCCCTACGAAGAGTTCATTGTATGGAATCAAAACCAAGGCAAACTTTAGAAATGGATAAGGGTCTCTTAGGTTTCGTTCCAATATTTTCCTTCCCTACAGCGGGATTATTGGGAAGGACCTCTAAGGTCTGAAAATGGTGGGTCACACTTACGAGGAGTTGTTAAGTTAGTTAACAATTTCCTGACCAAATAAATGATGACTAAAGTTTATAGGAATCAGAGTTATTCTGGTATAAAATTTAGTTGAGAACATCTAAAAGGAGTACCTGTCTGTCGTACGGTGGCTGTTGCTCTAAATCACTGAAGCGTCGTTGCAAAACAATTTTGTTAGGGTGCTTAATTACTTTTGCTAAAATTTGATTGGGTTTAAAGGCTAATGCATGAAACTAATATATATTTGTTTTTAATTTCAGCATGTCCACTTCTATTATTGCACTCCTAGCCGTGCAAAAACTTAACGGCGAGGATTACAAAGAATGGAAATCGAATCTAAACACTATTCTTGTGATAGATGATTTTAGGTTCGTCTTGCGAGAGGATTGTCCTCAAGCTCCTGCGCCTAACGCCACTATGGCGGTGCGCAACGTCTATGATAGATGGATCAAGGCCAATGACAAGGTTAAGGTCTACATCTTGGCGAGCATATCTAATGTGCTTGCTAAGAAGCACGAGGACACGGTCACCGCTAAGGAAATCATGGACTTGTTGCAAAGCATGTTTGGACAACCGTCCTCACAGGCTCGACACGAAGCCCTTAAGTTCATTTATAAATCCCGCATGAAGGAAGTCTCCTCAGTGATAGAACACGTTCTCAACCTGATGGTCCACTTCAACGTGGCAGAGTCGAACGGGGCTATCATAGATGAGTAG

mRNA sequence

ATGCAGCAGCTCCATGGCGTTGTAGGGACAACACACAGCGCCACGACGCTGTGCAGCGCCATGGCACCATGCTTAGTGTCCCGGCGCTGCTACTGCGGCTTTCTGCTACAGCAACGCCATGGCGCTGCCCTTAGGCGCAGAGGCGCTGTCCCAGGTGTTTTTCGACATGTTTTCGTGGCTCCGGTTCGTGTAAGATTTAAGCGATGTCTACATTGCCCGACATTATTCCCTAGCCTAACCGACGCAACTAGTGATCCCGCCTCAGTCAGACCTCCTGTACGTCATCACCACGGTCGGCCCGGTTCGCACCTGAAACAAATAAGCATGTCCACTTCTATTATTGCACTCCTAGCCGTGCAAAAACTTAACGGCGAGGATTACAAAGAATGGAAATCGAATCTAAACACTATTCTTGTGATAGATGATTTTAGGTTCGTCTTGCGAGAGGATTGTCCTCAAGCTCCTGCGCCTAACGCCACTATGGCGGTGCGCAACGTCTATGATAGATGGATCAAGGCCAATGACAAGGTTAAGGTCTACATCTTGGCGAGCATATCTAATGTGCTTGCTAAGAAGCACGAGGACACGGTCACCGCTAAGGAAATCATGGACTTGTTGCAAAGCATGTTTGGACAACCGTCCTCACAGGCTCGACACGAAGCCCTTAAGTTCATTTATAAATCCCGCATGAAGGAAGTCTCCTCAGTGATAGAACACGTTCTCAACCTGATGGTCCACTTCAACGTGGCAGAGTCGAACGGGGCTATCATAGATGAGTAG

Coding sequence (CDS)

ATGCAGCAGCTCCATGGCGTTGTAGGGACAACACACAGCGCCACGACGCTGTGCAGCGCCATGGCACCATGCTTAGTGTCCCGGCGCTGCTACTGCGGCTTTCTGCTACAGCAACGCCATGGCGCTGCCCTTAGGCGCAGAGGCGCTGTCCCAGGTGTTTTTCGACATGTTTTCGTGGCTCCGGTTCGTGTAAGATTTAAGCGATGTCTACATTGCCCGACATTATTCCCTAGCCTAACCGACGCAACTAGTGATCCCGCCTCAGTCAGACCTCCTGTACGTCATCACCACGGTCGGCCCGGTTCGCACCTGAAACAAATAAGCATGTCCACTTCTATTATTGCACTCCTAGCCGTGCAAAAACTTAACGGCGAGGATTACAAAGAATGGAAATCGAATCTAAACACTATTCTTGTGATAGATGATTTTAGGTTCGTCTTGCGAGAGGATTGTCCTCAAGCTCCTGCGCCTAACGCCACTATGGCGGTGCGCAACGTCTATGATAGATGGATCAAGGCCAATGACAAGGTTAAGGTCTACATCTTGGCGAGCATATCTAATGTGCTTGCTAAGAAGCACGAGGACACGGTCACCGCTAAGGAAATCATGGACTTGTTGCAAAGCATGTTTGGACAACCGTCCTCACAGGCTCGACACGAAGCCCTTAAGTTCATTTATAAATCCCGCATGAAGGAAGTCTCCTCAGTGATAGAACACGTTCTCAACCTGATGGTCCACTTCAACGTGGCAGAGTCGAACGGGGCTATCATAGATGAGTAG

Protein sequence

MQQLHGVVGTTHSATTLCSAMAPCLVSRRCYCGFLLQQRHGAALRRRGAVPGVFRHVFVAPVRVRFKRCLHCPTLFPSLTDATSDPASVRPPVRHHHGRPGSHLKQISMSTSIIALLAVQKLNGEDYKEWKSNLNTILVIDDFRFVLREDCPQAPAPNATMAVRNVYDRWIKANDKVKVYILASISNVLAKKHEDTVTAKEIMDLLQSMFGQPSSQARHEALKFIYKSRMKEVSSVIEHVLNLMVHFNVAESNGAIIDE
Homology
[Close]
BLAST of Moc11g17000 vs. NCBI nr
Match: XP_022152352.1 (uncharacterized protein LOC111020095 [Momordica charantia])

HSP 1 Score: 263.8 bits (673), Expect = 1.5e-66
Identity = 132/151 (87.42%), Postives = 141/151 (93.38%), Query Frame = 0 

Query: 109 MSTSIIALLAVQKLNGEDYKEWKSNLNTILVIDDFRFVLREDCPQAPAPNATMAVRNVYD 168
           MSTSIIALLA Q+LNGE+YK+WKSNLNTILVIDD +FVL+EDCPQA APNAT+AVR  YD
Sbjct: 1   MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLKFVLQEDCPQASAPNATVAVRIAYD 60

Query: 169 RWIKANDKVKVYILASISNVLAKKHEDTVTAKEIMDLLQSMFGQPSSQARHEALKFIYKS 228
           RWIKANDK KVYILASIS+VLAKKHEDT+TAKEIMD LQSMFGQPSSQARHEALKFIY S
Sbjct: 61  RWIKANDKAKVYILASISDVLAKKHEDTITAKEIMDSLQSMFGQPSSQARHEALKFIYNS 120

Query: 229 RMKEVSSVIEHVLNLMVHFNVAESNGAIIDE 260
           RMKE SSV EHVLNLMVHFNVAESNGA+IDE
Sbjct: 121 RMKEGSSVREHVLNLMVHFNVAESNGAVIDE 151

[Close]
BLAST of Moc11g17000 vs. NCBI nr
Match: XP_022158197.1 (uncharacterized protein LOC111024734 [Momordica charantia])

HSP 1 Score: 258.1 bits (658), Expect = 8.3e-65
Identity = 128/151 (84.77%), Postives = 137/151 (90.73%), Query Frame = 0 

Query: 109 MSTSIIALLAVQKLNGEDYKEWKSNLNTILVIDDFRFVLREDCPQAPAPNATMAVRNVYD 168
           MS SIIALLA QKLNGE+Y++WKSNLNTILVIDD RFVL+EDCPQAP  NAT+AVRN YD
Sbjct: 1   MSASIIALLAAQKLNGENYRQWKSNLNTILVIDDLRFVLQEDCPQAPVSNATVAVRNAYD 60

Query: 169 RWIKANDKVKVYILASISNVLAKKHEDTVTAKEIMDLLQSMFGQPSSQARHEALKFIYKS 228
           RWIK+NDK KVYILASIS+VLAKKHEDTVT KEIMD LQSMFGQPS QARHEALKF+Y S
Sbjct: 61  RWIKSNDKAKVYILASISDVLAKKHEDTVTTKEIMDSLQSMFGQPSLQARHEALKFVYNS 120

Query: 229 RMKEVSSVIEHVLNLMVHFNVAESNGAIIDE 260
           RMKE SSV EHVLNLMVHFNVAESNG +IDE
Sbjct: 121 RMKEGSSVREHVLNLMVHFNVAESNGIVIDE 151

[Close]
BLAST of Moc11g17000 vs. NCBI nr
Match: XP_022158062.1 (uncharacterized protein LOC111024637 [Momordica charantia])

HSP 1 Score: 243.8 bits (621), Expect = 1.6e-60
Identity = 122/151 (80.79%), Postives = 134/151 (88.74%), Query Frame = 0 

Query: 109 MSTSIIALLAVQKLNGEDYKEWKSNLNTILVIDDFRFVLREDCPQAPAPNATMAVRNVYD 168
           MSTSII LL  QKLN E+YK+WKSN+NTIL+IDD RFVL+EDCPQAPAPNAT+AVRN+YD
Sbjct: 1   MSTSIITLLVAQKLNDENYKQWKSNINTILMIDDLRFVLQEDCPQAPAPNATVAVRNIYD 60

Query: 169 RWIKANDKVKVYILASISNVLAKKHEDTVTAKEIMDLLQSMFGQPSSQARHEALKFIYKS 228
           RWIKANDK KV ILASIS+VLAKKHE++V  KEIMD LQSMFGQPSSQARHEAL  IY S
Sbjct: 61  RWIKANDKAKVDILASISDVLAKKHENSVITKEIMDSLQSMFGQPSSQARHEALNSIYNS 120

Query: 229 RMKEVSSVIEHVLNLMVHFNVAESNGAIIDE 260
           RMK+ SSV EHVLNLMVHFNVAESN  +IDE
Sbjct: 121 RMKKDSSVREHVLNLMVHFNVAESNMTVIDE 151

[Close]
BLAST of Moc11g17000 vs. NCBI nr
Match: XP_022151295.1 (uncharacterized protein LOC111019259 [Momordica charantia])

HSP 1 Score: 216.5 bits (550), Expect = 2.8e-52
Identity = 112/151 (74.17%), Postives = 127/151 (84.11%), Query Frame = 0 

Query: 109 MSTSIIALLAVQKLNGEDYKEWKSNLNTILVIDDFRFVLREDCPQAPAPNATMAVRNVYD 168
           MS SIIALLA +KLN E+YK+ KSNLN ILVI+D RFVL+E+ P APA +AT+AV   YD
Sbjct: 1   MSASIIALLATEKLNSENYKQLKSNLNIILVINDLRFVLQEERPLAPALDATVAVHKFYD 60

Query: 169 RWIKANDKVKVYILASISNVLAKKHEDTVTAKEIMDLLQSMFGQPSSQARHEALKFIYKS 228
           RWIKANDK +VYIL SISNVLAKKHE+ VTAKEIMD LQSMFGQ SSQA+HE LKF+Y S
Sbjct: 61  RWIKANDKAEVYILTSISNVLAKKHENMVTAKEIMDSLQSMFGQSSSQAQHEVLKFVYNS 120

Query: 229 RMKEVSSVIEHVLNLMVHFNVAESNGAIIDE 260
            MKE  SV EHVLNLM+HFN+AE+N AIIDE
Sbjct: 121 CMKEGLSVREHVLNLMIHFNMAETNEAIIDE 151

[Close]
BLAST of Moc11g17000 vs. NCBI nr
Match: XP_022157844.1 (uncharacterized protein LOC111024457 [Momordica charantia])

HSP 1 Score: 210.7 bits (535), Expect = 1.5e-50
Identity = 100/151 (66.23%), Postives = 123/151 (81.46%), Query Frame = 0 

Query: 109 MSTSIIALLAVQKLNGEDYKEWKSNLNTILVIDDFRFVLREDCPQAPAPNATMAVRNVYD 168
           M++SI+ LLA +KLNG +Y  WK+NLNTILV+DD RFVL E+CPQ PA NA   VR  +D
Sbjct: 1   MNSSIVQLLASEKLNGVNYSTWKNNLNTILVVDDLRFVLTEECPQTPATNANRNVREAFD 60

Query: 169 RWIKANDKVKVYILASISNVLAKKHEDTVTAKEIMDLLQSMFGQPSSQARHEALKFIYKS 228
           RW+KANDK +VYILAS+++VLAKKHE  +TAKEIMD L++MFG+PSS  RHEALK++Y  
Sbjct: 61  RWVKANDKARVYILASMTDVLAKKHEPLMTAKEIMDSLKAMFGEPSSTLRHEALKYVYNE 120

Query: 229 RMKEVSSVIEHVLNLMVHFNVAESNGAIIDE 260
            MKE +SV EHVL++MVHFN AE NGA IDE
Sbjct: 121 HMKEGTSVREHVLDMMVHFNTAEVNGATIDE 151

[Close]
BLAST of Moc11g17000 vs. ExPASy TrEMBL
Match: A0A6J1DFZ2 (uncharacterized protein LOC111020095 OS=Momordica charantia OX=3673 GN=LOC111020095 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 7.3e-67
Identity = 132/151 (87.42%), Postives = 141/151 (93.38%), Query Frame = 0 

Query: 109 MSTSIIALLAVQKLNGEDYKEWKSNLNTILVIDDFRFVLREDCPQAPAPNATMAVRNVYD 168
           MSTSIIALLA Q+LNGE+YK+WKSNLNTILVIDD +FVL+EDCPQA APNAT+AVR  YD
Sbjct: 1   MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLKFVLQEDCPQASAPNATVAVRIAYD 60

Query: 169 RWIKANDKVKVYILASISNVLAKKHEDTVTAKEIMDLLQSMFGQPSSQARHEALKFIYKS 228
           RWIKANDK KVYILASIS+VLAKKHEDT+TAKEIMD LQSMFGQPSSQARHEALKFIY S
Sbjct: 61  RWIKANDKAKVYILASISDVLAKKHEDTITAKEIMDSLQSMFGQPSSQARHEALKFIYNS 120

Query: 229 RMKEVSSVIEHVLNLMVHFNVAESNGAIIDE 260
           RMKE SSV EHVLNLMVHFNVAESNGA+IDE
Sbjct: 121 RMKEGSSVREHVLNLMVHFNVAESNGAVIDE 151

[Close]
BLAST of Moc11g17000 vs. ExPASy TrEMBL
Match: A0A6J1DWL0 (uncharacterized protein LOC111024734 OS=Momordica charantia OX=3673 GN=LOC111024734 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 4.0e-65
Identity = 128/151 (84.77%), Postives = 137/151 (90.73%), Query Frame = 0 

Query: 109 MSTSIIALLAVQKLNGEDYKEWKSNLNTILVIDDFRFVLREDCPQAPAPNATMAVRNVYD 168
           MS SIIALLA QKLNGE+Y++WKSNLNTILVIDD RFVL+EDCPQAP  NAT+AVRN YD
Sbjct: 1   MSASIIALLAAQKLNGENYRQWKSNLNTILVIDDLRFVLQEDCPQAPVSNATVAVRNAYD 60

Query: 169 RWIKANDKVKVYILASISNVLAKKHEDTVTAKEIMDLLQSMFGQPSSQARHEALKFIYKS 228
           RWIK+NDK KVYILASIS+VLAKKHEDTVT KEIMD LQSMFGQPS QARHEALKF+Y S
Sbjct: 61  RWIKSNDKAKVYILASISDVLAKKHEDTVTTKEIMDSLQSMFGQPSLQARHEALKFVYNS 120

Query: 229 RMKEVSSVIEHVLNLMVHFNVAESNGAIIDE 260
           RMKE SSV EHVLNLMVHFNVAESNG +IDE
Sbjct: 121 RMKEGSSVREHVLNLMVHFNVAESNGIVIDE 151

[Close]
BLAST of Moc11g17000 vs. ExPASy TrEMBL
Match: A0A6J1DW68 (uncharacterized protein LOC111024637 OS=Momordica charantia OX=3673 GN=LOC111024637 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 7.8e-61
Identity = 122/151 (80.79%), Postives = 134/151 (88.74%), Query Frame = 0 

Query: 109 MSTSIIALLAVQKLNGEDYKEWKSNLNTILVIDDFRFVLREDCPQAPAPNATMAVRNVYD 168
           MSTSII LL  QKLN E+YK+WKSN+NTIL+IDD RFVL+EDCPQAPAPNAT+AVRN+YD
Sbjct: 1   MSTSIITLLVAQKLNDENYKQWKSNINTILMIDDLRFVLQEDCPQAPAPNATVAVRNIYD 60

Query: 169 RWIKANDKVKVYILASISNVLAKKHEDTVTAKEIMDLLQSMFGQPSSQARHEALKFIYKS 228
           RWIKANDK KV ILASIS+VLAKKHE++V  KEIMD LQSMFGQPSSQARHEAL  IY S
Sbjct: 61  RWIKANDKAKVDILASISDVLAKKHENSVITKEIMDSLQSMFGQPSSQARHEALNSIYNS 120

Query: 229 RMKEVSSVIEHVLNLMVHFNVAESNGAIIDE 260
           RMK+ SSV EHVLNLMVHFNVAESN  +IDE
Sbjct: 121 RMKKDSSVREHVLNLMVHFNVAESNMTVIDE 151

[Close]
BLAST of Moc11g17000 vs. ExPASy TrEMBL
Match: A0A6J1DAT1 (uncharacterized protein LOC111019259 OS=Momordica charantia OX=3673 GN=LOC111019259 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 1.3e-52
Identity = 112/151 (74.17%), Postives = 127/151 (84.11%), Query Frame = 0 

Query: 109 MSTSIIALLAVQKLNGEDYKEWKSNLNTILVIDDFRFVLREDCPQAPAPNATMAVRNVYD 168
           MS SIIALLA +KLN E+YK+ KSNLN ILVI+D RFVL+E+ P APA +AT+AV   YD
Sbjct: 1   MSASIIALLATEKLNSENYKQLKSNLNIILVINDLRFVLQEERPLAPALDATVAVHKFYD 60

Query: 169 RWIKANDKVKVYILASISNVLAKKHEDTVTAKEIMDLLQSMFGQPSSQARHEALKFIYKS 228
           RWIKANDK +VYIL SISNVLAKKHE+ VTAKEIMD LQSMFGQ SSQA+HE LKF+Y S
Sbjct: 61  RWIKANDKAEVYILTSISNVLAKKHENMVTAKEIMDSLQSMFGQSSSQAQHEVLKFVYNS 120

Query: 229 RMKEVSSVIEHVLNLMVHFNVAESNGAIIDE 260
            MKE  SV EHVLNLM+HFN+AE+N AIIDE
Sbjct: 121 CMKEGLSVREHVLNLMIHFNMAETNEAIIDE 151

[Close]
BLAST of Moc11g17000 vs. ExPASy TrEMBL
Match: A0A6J1DXQ5 (uncharacterized protein LOC111024457 OS=Momordica charantia OX=3673 GN=LOC111024457 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 7.3e-51
Identity = 100/151 (66.23%), Postives = 123/151 (81.46%), Query Frame = 0 

Query: 109 MSTSIIALLAVQKLNGEDYKEWKSNLNTILVIDDFRFVLREDCPQAPAPNATMAVRNVYD 168
           M++SI+ LLA +KLNG +Y  WK+NLNTILV+DD RFVL E+CPQ PA NA   VR  +D
Sbjct: 1   MNSSIVQLLASEKLNGVNYSTWKNNLNTILVVDDLRFVLTEECPQTPATNANRNVREAFD 60

Query: 169 RWIKANDKVKVYILASISNVLAKKHEDTVTAKEIMDLLQSMFGQPSSQARHEALKFIYKS 228
           RW+KANDK +VYILAS+++VLAKKHE  +TAKEIMD L++MFG+PSS  RHEALK++Y  
Sbjct: 61  RWVKANDKARVYILASMTDVLAKKHEPLMTAKEIMDSLKAMFGEPSSTLRHEALKYVYNE 120

Query: 229 RMKEVSSVIEHVLNLMVHFNVAESNGAIIDE 260
            MKE +SV EHVL++MVHFN AE NGA IDE
Sbjct: 121 HMKEGTSVREHVLDMMVHFNTAEVNGATIDE 151

The following BLAST results are available for this feature:
BLAST of Moc11g17000 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022152352.11.5e-6687.42uncharacterized protein LOC111020095 [Momordica charantia][more]
XP_022158197.18.3e-6584.77uncharacterized protein LOC111024734 [Momordica charantia][more]
XP_022158062.11.6e-6080.79uncharacterized protein LOC111024637 [Momordica charantia][more]
XP_022151295.12.8e-5274.17uncharacterized protein LOC111019259 [Momordica charantia][more]
XP_022157844.11.5e-5066.23uncharacterized protein LOC111024457 [Momordica charantia][more]
BLAST of Moc11g17000 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc11g17000 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DFZ27.3e-6787.42uncharacterized protein LOC111020095 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A6J1DWL04.0e-6584.77uncharacterized protein LOC111024734 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1DW687.8e-6180.79uncharacterized protein LOC111024637 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1DAT11.3e-5274.17uncharacterized protein LOC111019259 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A6J1DXQ57.3e-5166.23uncharacterized protein LOC111024457 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
BLAST of Moc11g17000 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 170..257
e-value: 1.4E-6
score: 28.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..103
NoneNo IPR availablePANTHERPTHR35317:SF8POLYPROTEIN-LIKE PROTEINcoord: 126..258
NoneNo IPR availablePANTHERPTHR35317OS04G0629600 PROTEINcoord: 126..258

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc11g17000.1Moc11g17000.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding