Moc11g16590 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g16590
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ribonuclease H
Location	chr11: 12669738 .. 12673357 (+)
RNA-Seq Expression	Moc11g16590
Synteny	Moc11g16590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGGGTGGGGCCCCTTGTTCAAGTCCTGGAATCAGCATTTAAGGGAACACTCATCTACTCCCCTAAAGTCGGAGAGGAGTGAATTTCATCATGTGAAGTTATGTTTCCAGCTCCCCACTCGATCTCGTCCCCAAAATGATAGGAATATTGAGTCGGCAACTCGGGCTACTCTCACCCATACAGATCAAAGGACAAGCCATTGCGAGCAGGAGTCCATAACTCACCCAGGATTGAGAATGAGTTGCCTGGTCATCCTAAGAAACAACAATCTATTAGTTAACGGTGTTACATCTAAGGATTGGCTATTTTGTGGTCCGGTCTTATACAAACTCATTGTATAGGATACCCCCACTCGCATGTCTCCACACGAACGACCTGGATCAAGTCGTCTGTAACCTTTACAGAGTGGACCGTATCCATAGTGTTGTTAGGATAAGGTACCCAGTCTTATCCATATACTATAGACCCTTTAGGTTATTCACGGGACATTATCCACTTGTATATCAGGGTATATCAAATATATACCTCGTATATCAGGGGTATATCAAATATATACCCAGTACATATATTGTCCCGGTTACACTAAAATAACCTCGGATGTTTAGTTTATTGGATTTTGGACAATGCAATGCTATGAATTCAACAACAAATTTATTGAATAAAACTTTATTGAATATACATTTGTTTTTACACAAAATACAAACTACGAGTTTAGGGCAACACACCAACATTGTCTACCCGTGCCAAGACGGTTTCGAGCTGAGCAATTGAAGCATGTTATAGCTACCGTCTTTTGTAAATAATAAATCAAAGTAATTGTCCATTTTTTTTTCTTCCCCTCATTTTCTTAATTAATTAAATTAATTTTCTATTTCTTGTACATTCCATCCAGACATATTATTTGTTTATAATTCTTCCATATCAATAAAAGTTTGAGTTCATTCATTTTGTTTTTTTGCTCTACTATTCTCTGGGCCAGTTTATTCATTTGTTTTCTTTTCTTTTCTTTTCTCCTTTATTATGTCTTAAGCAGTAATACTGAGATTGAATGCGATAATGATTAGAAATACGAGCTTGATACACCTATATACAATATCGAGTCTGATGAGGAAATAGATGAGGAACCCTCTGCTGAGTTATTGAGAATGCTAGAAGAAGAAGAAAAGATGTTGGGACCCCATAAAGAATTAACTGAGACAATTAACTTGGGATCACAAGCCGAAGCCAAAGTGATTAAAATAGGCATTAATATGTCTTCAGAGAATCGCAAAAAGTTGATAGAGTTTTTTCATGAGTATGCTGATGTTTTTACTTGGTCCTATCAAGATATGCCTGGTTTAGATACAGACATCGTAGTGCACAAATTGCTGATCAACCCAGAGTTCAAGCTGGTGAGACAGAAGTTACGGAAGATGAAGCCGGATATGTTGATCAAGATAAAAGATGAAGTAAGGAAGCAAATTGATGCAGGATTCCTTACAGTATCTAATTACCCTGAGTGGGTGGCAAGCATTGTCCCTGTACCAAAGAAAAATGGACAAGTAAGAATGTGTGTGGATTATAGAGACTTGAATCGTGCAAGTCCAAAAGATAACTTCCCGCTTCCTCATACGATGTGTTGGTTGATAATACTGCTGGGTTCTCAACCTTCTCCTTTATGGATGGGTTCTCAGGCTACAATCAGATCAAGATGGCACCTGAAGATCGTGAAAAAATCATATTCATTACGCTATGGGGAACTTTCTGCTACAAAGTTATGCCATTTGGACTAAAAAACGCTGGGGCAACCTACCAACGTATAATGGTTACTCTCTTTCATGACTTGATGCACAAAGAAATTGAAGTTTACGTGGATGATATGATTGCCAAGTCAAAAGAGGGCGAGGAGCACACAACTATTTTAAGGAAGCTGTTTGATCGATTGAGGAAGTTCAAATTGAAACTCAATCCCAACAAACGCATATTTGGGGCAACCACTGGAAAACTCCTGGGTTTTGTAGTAAGCCAAGAAGATATTAAAGTTGACCCGGATAAAGTCAAAGCAATCTTAGAGATACCACCTCCACGGACGCAGAAAGAAGTCAGAGGATTTCTAGGACGACTCAACTACATCGCAAGGTTCATATCTCACTTAACAACAACTTGCATACCCATCTTTAAATTGCTCCGCAAGAACAACGATGGGGTATGGAGTGAAGATTGTCAAACAACATTTGATAAGATTAAGCAGTATTTGCAAGACCCTCTAGTTTTTGTGCCACTAACTCCAGGACGACCCTTTATTTTATATCTCACAGTGACTGAAGACTCAATGGGATGTGTATCGAGGCAGCATGATGATTCAGGCAGGAAAGAACGTGCTATATATTATTTAAGTAAGAAGTTCACCAATTGCGAAACTAGATACTCTCAAGTAGAAAAAACTTGTTGTGCTCTAGCTTGGGCTGCTCGACGTCTAAGACAATACATGTTGTATTATACCACATGGCTCATTTCAAAGATGGACCCCATAAAGTAAATTTTTGAAAAGCCGTCTCTCTCGGTCAAATTGCAAGGTGGCAGGTTCTCTTGTCCGAATATGATATTGTCTATGTGACTCAAAAGGCCATTAAGGGGAGTGTTATGGCCGACCACCTAGCTCAACAACCTATAAATGACTACGTACCGGTGAAGTTCGATTTTCCAGATGAGTATATCTCCACCATAACCGCAAGTGAGGAAAGTTTAGACCCACAAACTTGGACCATGATGTTTGATGGTGCCTCTAACGAGTTAGGTCATGGGATAGGGGCTATTTTGATATCCCAAAGGGGAACTATACCCTCTTACTGCTAGATTATATTTTGACTGCACACATAATATGGCCGAGTATGAAGCATGCTCGATGGGCGTCCAAGCTACTATTGATATGAAGGTTAAGAAACTTAAAGTTTTTGGGGATTCTATGCTAGTAATTCATCAACCAAGAGGAGAATGGGAAACAAGAGACGTTAAGTTGTTGCCTTACAAACAACTCATAACACAATTGTCACAAGAATTTGATGAAATCTCATTTGATTTTTTGCCAAGAGAAAATAATCAAGTAGCAGATGCATTGGCCACATTAGCGGTGATGTTCAATTTAGAACTCAATGAGGATGCCCGTCCGATTAAAGTTGGGAGGAGAGATGTCCCAGCTTCTTGTATGAGTATTGAGAAAGAACCCGACGGTAACCCCTGGTTTCATGACATCAAGCAATATATAAAGAGTAAAGAATATCCACCAAATGCTTCAGAAAATGATAAGTGCACCCTCCGCAAGTTGGCAATGAAGTTTTTCTTAAATGGAGAGATACTGTACAAGAGGAACCATGACATGGTTCTCCTAAGGTGCGTCGAAGGAAGAGAGGCCAATTGGATTATGAAGGAAATTCATGAAAGAGTTTGTGGCAATCATGCAAATGGGCACATGATGGCTAGACAAATTTTAAGAGCTAGCTATTATTGGCTGACTATAGAGACAGATTGTATTAAATATGCAAGAAAATGTCACAAATGTCAAATTTACTCGGACAAGACTTATGCTCCTGCTTCTCATTTGCAGACTTTGACAGCTTCTTGGCCTTTCTCTATGTAG

mRNA sequence

ATGAGAGGGTGGGGCCCCTTGTTCAAGTCCTGGAATCAGCATTTAAGGGAACACTCATCTACTCCCCTAAAGTCGGAGAGGAGTGAATTTCATCATGTGAAGTTATGTTTCCAGCTCCCCACTCGATCTCGTCCCCAAAATGATAGGAATATTGAGTCGGCAACTCGGGCTACTCTCACCCATACAGATCAAAGGACAAGCCATTGCGAGCAGGAGTCCATAACTCACCCAGGATTGAGAATGAGTTGCCTGGTCATCCTAAGAAACAACAATCTATTAGTTAACGGTGTTACATCTAAGGATTGGCTATTTTGTGGTCCGAAATACGAGCTTGATACACCTATATACAATATCGAGTCTGATGAGGAAATAGATGAGGAACCCTCTGCTGAGTTATTGAGAATGCTAGAAGAAGAAGAAAAGATGTTGGGACCCCATAAAGAATTAACTGAGACAATTAACTTGGGATCACAAGCCGAAGCCAAAGTGATTAAAATAGGCATTAATATGTCTTCAGAGAATCGCAAAAAGTTGATAGAGTTTTTTCATGAGTGGCAGGTTCTCTTGTCCGAATATGATATTGTCTATGTGACTCAAAAGGCCATTAAGGGGAGTGTTATGGCCGACCACCTAGCTCAACAACCTATAAATGACTACGTACCGGTGAAGTTCGATTTTCCAGATGAGTATATCTCCACCATAACCGCAAGGGAACTATACCCTCTTACTGCTAGATTATATTTTGACTGCACACATAATATGGCCGAGTATGAAGCATGCTCGATGGGCGTCCAAGCTACTATTGATATGAAGGTTAAGAAACTTAAAGTTTTTGGGGATTCTATGCTAGTAATTCATCAACCAAGAGGAGAATGGGAAACAAGAGACGTTAAGTTGTTGCCTTACAAACAACTCATAACACAATTGTCACAAGAATTTGATGAAATCTCATTTGATTTTTTGCCAAGAGAAAATAATCAAGTAGCAGATGCATTGGCCACATTAGCGGTGATGTTCAATTTAGAACTCAATGAGGATGCCCGTCCGATTAAAGTTGGGAGGAGAGATGTCCCAGCTTCTTGTATGAGTATTGAGAAAGAACCCGACGGTAACCCCTGGTTTCATGACATCAAGCAATATATAAAGAGTAAAGAATATCCACCAAATGCTTCAGAAAATGATAAGTGCACCCTCCGCAAGTTGGCAATGAAGTTTTTCTTAAATGGAGAGATACTGTACAAGAGGAACCATGACATGGTTCTCCTAAGGTGCGTCGAAGGAAGAGAGGCCAATTGGATTATGAAGGAAATTCATGAAAGAGTTTGTGGCAATCATGCAAATGGGCACATGATGGCTAGACAAATTTTAAGAGCTAGCTATTATTGGCTGACTATAGAGACAGATTGTATTAAATATGCAAGAAAATGTCACAAATGTCAAATTTACTCGGACAAGACTTATGCTCCTGCTTCTCATTTGCAGACTTTGACAGCTTCTTGGCCTTTCTCTATGTAG

Coding sequence (CDS)

ATGAGAGGGTGGGGCCCCTTGTTCAAGTCCTGGAATCAGCATTTAAGGGAACACTCATCTACTCCCCTAAAGTCGGAGAGGAGTGAATTTCATCATGTGAAGTTATGTTTCCAGCTCCCCACTCGATCTCGTCCCCAAAATGATAGGAATATTGAGTCGGCAACTCGGGCTACTCTCACCCATACAGATCAAAGGACAAGCCATTGCGAGCAGGAGTCCATAACTCACCCAGGATTGAGAATGAGTTGCCTGGTCATCCTAAGAAACAACAATCTATTAGTTAACGGTGTTACATCTAAGGATTGGCTATTTTGTGGTCCGAAATACGAGCTTGATACACCTATATACAATATCGAGTCTGATGAGGAAATAGATGAGGAACCCTCTGCTGAGTTATTGAGAATGCTAGAAGAAGAAGAAAAGATGTTGGGACCCCATAAAGAATTAACTGAGACAATTAACTTGGGATCACAAGCCGAAGCCAAAGTGATTAAAATAGGCATTAATATGTCTTCAGAGAATCGCAAAAAGTTGATAGAGTTTTTTCATGAGTGGCAGGTTCTCTTGTCCGAATATGATATTGTCTATGTGACTCAAAAGGCCATTAAGGGGAGTGTTATGGCCGACCACCTAGCTCAACAACCTATAAATGACTACGTACCGGTGAAGTTCGATTTTCCAGATGAGTATATCTCCACCATAACCGCAAGGGAACTATACCCTCTTACTGCTAGATTATATTTTGACTGCACACATAATATGGCCGAGTATGAAGCATGCTCGATGGGCGTCCAAGCTACTATTGATATGAAGGTTAAGAAACTTAAAGTTTTTGGGGATTCTATGCTAGTAATTCATCAACCAAGAGGAGAATGGGAAACAAGAGACGTTAAGTTGTTGCCTTACAAACAACTCATAACACAATTGTCACAAGAATTTGATGAAATCTCATTTGATTTTTTGCCAAGAGAAAATAATCAAGTAGCAGATGCATTGGCCACATTAGCGGTGATGTTCAATTTAGAACTCAATGAGGATGCCCGTCCGATTAAAGTTGGGAGGAGAGATGTCCCAGCTTCTTGTATGAGTATTGAGAAAGAACCCGACGGTAACCCCTGGTTTCATGACATCAAGCAATATATAAAGAGTAAAGAATATCCACCAAATGCTTCAGAAAATGATAAGTGCACCCTCCGCAAGTTGGCAATGAAGTTTTTCTTAAATGGAGAGATACTGTACAAGAGGAACCATGACATGGTTCTCCTAAGGTGCGTCGAAGGAAGAGAGGCCAATTGGATTATGAAGGAAATTCATGAAAGAGTTTGTGGCAATCATGCAAATGGGCACATGATGGCTAGACAAATTTTAAGAGCTAGCTATTATTGGCTGACTATAGAGACAGATTGTATTAAATATGCAAGAAAATGTCACAAATGTCAAATTTACTCGGACAAGACTTATGCTCCTGCTTCTCATTTGCAGACTTTGACAGCTTCTTGGCCTTTCTCTATGTAG

Protein sequence

MRGWGPLFKSWNQHLREHSSTPLKSERSEFHHVKLCFQLPTRSRPQNDRNIESATRATLTHTDQRTSHCEQESITHPGLRMSCLVILRNNNLLVNGVTSKDWLFCGPKYELDTPIYNIESDEEIDEEPSAELLRMLEEEEKMLGPHKELTETINLGSQAEAKVIKIGINMSSENRKKLIEFFHEWQVLLSEYDIVYVTQKAIKGSVMADHLAQQPINDYVPVKFDFPDEYISTITARELYPLTARLYFDCTHNMAEYEACSMGVQATIDMKVKKLKVFGDSMLVIHQPRGEWETRDVKLLPYKQLITQLSQEFDEISFDFLPRENNQVADALATLAVMFNLELNEDARPIKVGRRDVPASCMSIEKEPDGNPWFHDIKQYIKSKEYPPNASENDKCTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGREANWIMKEIHERVCGNHANGHMMARQILRASYYWLTIETDCIKYARKCHKCQIYSDKTYAPASHLQTLTASWPFSM

Homology

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BLAST of Moc11g16590 vs. NCBI nr
Match: XP_022158986.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia])

HSP 1 Score: 593.6 bits (1529), Expect = 1.6e-165
Identity = 291/353 (82.44%), Postives = 304/353 (86.12%), Query Frame = 0


Query: 185  WQVLLSEYDIVYVTQKAIKGSVMADHLAQQPINDYVPVKFDFPDEYISTITAR------- 244
            WQVLLSEYDIVYVT+KAIKGS +AD+LAQQPINDY+PVKFDFPDEYISTITA        
Sbjct: 1238 WQVLLSEYDIVYVTRKAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQ 1297

Query: 245  --------------------------ELYPLTARLYFDCTHNMAEYEACSMGVQATIDMK 304
                                      ELYPLTARL FDCTHNMAEYEACSMGVQA +DMK
Sbjct: 1298 TWTMMFDGASNELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMK 1357

Query: 305  VKKLKVFGDSMLVIHQPRGEWETRDVKLLPYKQLITQLSQEFDEISFDFLPRENNQVADA 364
            VKKLKVFGDSMLVIHQ RGEWETRDVKLLPYKQLIT+LSQEFDEISFD+LPRENNQVADA
Sbjct: 1358 VKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADA 1417

Query: 365  LATLAVMFNLELNEDARPIKVGRRDVPASCMSIEKEPDGNPWFHDIKQYIKSKEYPPNAS 424
            LATLAVMFNLELNED  PIKVGRRDVPASCMSIE+EPDGNPWFH+IK YIKSKEYPPNAS
Sbjct: 1418 LATLAVMFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIKXYIKSKEYPPNAS 1477

Query: 425  ENDKCTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGREANWIMKEIHERVCGNHANGHMM 484
            ENDK TLRKLAMKFFLNGEILYKRNHDMVLLRCVEGR+AN IM+E+HE VCG HANGHMM
Sbjct: 1478 ENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGRDANRIMEEVHEGVCGTHANGHMM 1537

Query: 485  ARQILRASYYWLTIETDCIKYARKCHKCQIYSDKTYAPASHLQTLTASWPFSM 505
            ARQILRA YYWLTI TDCIKYARKCHKCQIYSDKT+APASHL TLTA WPFSM
Sbjct: 1538 ARQILRAGYYWLTIXTDCIKYARKCHKCQIYSDKTHAPASHLHTLTAPWPFSM 1590

[Close]

BLAST of Moc11g16590 vs. NCBI nr
Match: XP_022157796.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia])

HSP 1 Score: 593.2 bits (1528), Expect = 2.1e-165
Identity = 291/353 (82.44%), Postives = 302/353 (85.55%), Query Frame = 0


Query: 185  WQVLLSEYDIVYVTQKAIKGSVMADHLAQQPINDYVPVKFDFPDEYISTITAR------- 244
            WQVLLSEYDIVYVTQKAIKGS +AD+LAQQPINDY+PVKFDFPDEYISTITA        
Sbjct: 1067 WQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQ 1126

Query: 245  --------------------------ELYPLTARLYFDCTHNMAEYEACSMGVQATIDMK 304
                                      ELYPLT +L FDCTHNMAEYEACSMGVQA IDMK
Sbjct: 1127 TWTMMFDGASNELGHEIGAILISPKGELYPLTTKLCFDCTHNMAEYEACSMGVQAAIDMK 1186

Query: 305  VKKLKVFGDSMLVIHQPRGEWETRDVKLLPYKQLITQLSQEFDEISFDFLPRENNQVADA 364
            VKK KVFGDS LVIHQ RGEWETRDVKLLPYKQLIT+LSQEFDEISFD+LPRENNQVADA
Sbjct: 1187 VKKFKVFGDSTLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADA 1246

Query: 365  LATLAVMFNLELNEDARPIKVGRRDVPASCMSIEKEPDGNPWFHDIKQYIKSKEYPPNAS 424
            LATLAVMFNLELNED RPIKVGRRDVPASCMSIE+EPDGNPWFHDIKQYIKSKEY PNAS
Sbjct: 1247 LATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYIKSKEYQPNAS 1306

Query: 425  ENDKCTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGREANWIMKEIHERVCGNHANGHMM 484
            ENDK TLRKLAMKFFLNGEILYKRNHDMVLLRCVEGR+AN IM+E+HE VCG HANGHMM
Sbjct: 1307 ENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGRDANRIMEEVHEGVCGTHANGHMM 1366

Query: 485  ARQILRASYYWLTIETDCIKYARKCHKCQIYSDKTYAPASHLQTLTASWPFSM 505
            ARQILRA YYWLTIETDCIKYARKCHKCQIYSDKT+AP SHL TLTA WPFSM
Sbjct: 1367 ARQILRAGYYWLTIETDCIKYARKCHKCQIYSDKTHAPTSHLHTLTAPWPFSM 1419

[Close]

BLAST of Moc11g16590 vs. NCBI nr
Match: XP_022157796.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia])

HSP 1 Score: 53.1 bits (126), Expect = 7.9e-03
Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 145 PHKELTETINLGSQAEAKVIKIGINMSSENRKKLIEFFHEW 186
           P   +TE  +LGSQAEAK IKIG +MSSE+RKKLIE  HE+
Sbjct: 606 PVDNITEVGDLGSQAEAKEIKIGTHMSSESRKKLIELLHEY 646

HSP 2 Score: 592.8 bits (1527), Expect = 2.8e-165
Identity = 292/353 (82.72%), Postives = 302/353 (85.55%), Query Frame = 0


Query: 185  WQVLLSEYDIVYVTQKAIKGSVMADHLAQQPINDYVPVKFDFPDEYISTITAR------- 244
            WQVLLSEYDIVYVTQKAIKGS +AD+LAQQPINDY+PVKFDFPDEYISTITA        
Sbjct: 1629 WQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQ 1688

Query: 245  --------------------------ELYPLTARLYFDCTHNMAEYEACSMGVQATIDMK 304
                                      ELYPL ARL FDC HNMAEYEACSMGVQA IDMK
Sbjct: 1689 TWTMMFDGASNELGHGIGAILISPKGELYPLIARLCFDCKHNMAEYEACSMGVQAAIDMK 1748

Query: 305  VKKLKVFGDSMLVIHQPRGEWETRDVKLLPYKQLITQLSQEFDEISFDFLPRENNQVADA 364
            VKKLKVFGDSMLVIHQ RGEWETRDVKLLPYKQ IT+LSQEFDEISFD+LPRENNQVADA
Sbjct: 1749 VKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQFITELSQEFDEISFDYLPRENNQVADA 1808

Query: 365  LATLAVMFNLELNEDARPIKVGRRDVPASCMSIEKEPDGNPWFHDIKQYIKSKEYPPNAS 424
            LATLAVMFNLELNED RPIKVGRRDVPASCMSIE+EPDG PWFHDIKQYIKSKEYPPNAS
Sbjct: 1809 LATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPDGKPWFHDIKQYIKSKEYPPNAS 1868

Query: 425  ENDKCTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGREANWIMKEIHERVCGNHANGHMM 484
            ENDK TLRKLA+KFFLNGEILYKRNHDMVLLRCVEGR+AN IM+EIHE VCG HANGHMM
Sbjct: 1869 ENDKRTLRKLAIKFFLNGEILYKRNHDMVLLRCVEGRDANRIMEEIHEGVCGTHANGHMM 1928

Query: 485  ARQILRASYYWLTIETDCIKYARKCHKCQIYSDKTYAPASHLQTLTASWPFSM 505
            ARQILRA YYWLTIETDCIKYARKCHKCQIYSDKT+APASHL  LTA WPFSM
Sbjct: 1929 ARQILRAGYYWLTIETDCIKYARKCHKCQIYSDKTHAPASHLHALTAPWPFSM 1981

[Close]

BLAST of Moc11g16590 vs. NCBI nr
Match: XP_022147189.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia])

HSP 1 Score: 131.3 bits (329), Expect = 2.3e-26
Identity = 67/78 (85.90%), Postives = 73/78 (93.59%), Query Frame = 0


Query: 108  KYELDTPIYNIESDEEIDEEPSAELLRMLEEEEKMLGPHKELTETINLGSQAEAKVIKIG 167
            KYELDTPIY IESDEEID+EPSAELLRMLEEEEKMLGPH+ELTET+NLGSQAEAK IKIG
Sbjct: 1131 KYELDTPIYIIESDEEIDDEPSAELLRMLEEEEKMLGPHEELTETLNLGSQAEAKEIKIG 1190

Query: 168  INMSSENRKKLIEFFHEW 186
             +MSSE+RKKLIE  HE+
Sbjct: 1191 THMSSESRKKLIELLHEY 1208

HSP 2 Score: 583.6 bits (1503), Expect = 1.7e-162
Identity = 289/353 (81.87%), Postives = 301/353 (85.27%), Query Frame = 0


Query: 185  WQVLLSEYDIVYVTQKAIKGSVMADHLAQQPINDYVPVKFDFPDEYISTITAR------- 244
            WQVLLSEYDIVYVTQKAIKGS +AD+LAQQPINDY+PVKFDFPDEYISTITA        
Sbjct: 1034 WQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQ 1093

Query: 245  --------------------------ELYPLTARLYFDCTHNMAEYEACSMGVQATIDMK 304
                                      ELYPLTARL FDCTHNMAEYEACSMGVQA +DMK
Sbjct: 1094 TWTMMFDGASNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMK 1153

Query: 305  VKKLKVFGDSMLVIHQPRGEWETRDVKLLPYKQLITQLSQEFDEISFDFLPRENNQVADA 364
            V K KVFGDSMLVIHQ RGEWE RDVKLLPYKQLIT+LSQEFDEISFD+LPRENNQVADA
Sbjct: 1154 V-KXKVFGDSMLVIHQLRGEWEIRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADA 1213

Query: 365  LATLAVMFNLELNEDARPIKVGRRDVPASCMSIEKEPDGNPWFHDIKQYIKSKEYPPNAS 424
            LATLAVMFNLELNED RPIKVGRRDV ASCMSIE+EPDGNPWFHDIKQYIKSKEYPPNAS
Sbjct: 1214 LATLAVMFNLELNEDVRPIKVGRRDVSASCMSIEEEPDGNPWFHDIKQYIKSKEYPPNAS 1273

Query: 425  ENDKCTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGREANWIMKEIHERVCGNHANGHMM 484
            ENDK TLRKLAMKFFLN EILYKRNHDMVLLRCVE R+AN IM+E+HE VCG HANGHM+
Sbjct: 1274 ENDKRTLRKLAMKFFLNREILYKRNHDMVLLRCVEXRDANRIMEEVHEEVCGTHANGHMI 1333

Query: 485  ARQILRASYYWLTIETDCIKYARKCHKCQIYSDKTYAPASHLQTLTASWPFSM 505
            ARQILRA YYWLTIETDCIKYARKCHKCQIYSDKT+APASHL TLTA WPFSM
Sbjct: 1334 ARQILRAGYYWLTIETDCIKYARKCHKCQIYSDKTHAPASHLHTLTAPWPFSM 1385

[Close]

BLAST of Moc11g16590 vs. NCBI nr
Match: XP_022150030.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111018303 [Momordica charantia])

HSP 1 Score: 134.8 bits (338), Expect = 2.1e-27
Identity = 68/78 (87.18%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 108 KYELDTPIYNIESDEEIDEEPSAELLRMLEEEEKMLGPHKELTETINLGSQAEAKVIKIG 167
           KYELDTPIYNIESDEEID+EPSAELLRMLEEEEKMLGPH+ELTET+NLGSQAEAK IKIG
Sbjct: 551 KYELDTPIYNIESDEEIDDEPSAELLRMLEEEEKMLGPHEELTETLNLGSQAEAKEIKIG 610

Query: 168 INMSSENRKKLIEFFHEW 186
            +MSSE+RKKLIE  HE+
Sbjct: 611 THMSSESRKKLIELLHEY 628

HSP 2 Score: 582.4 bits (1500), Expect = 3.7e-162
Identity = 286/352 (81.25%), Postives = 300/352 (85.23%), Query Frame = 0


Query: 186  QVLLSEYDIVYVTQKAIKGSVMADHLAQQPINDYVPVKFDFPDEYISTITAR-------- 245
            QVLLSEYDIVYVTQKAIKGS +AD+LAQQPINDY+PVKFDFPDEYISTITA         
Sbjct: 1520 QVLLSEYDIVYVTQKAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQT 1579

Query: 246  -------------------------ELYPLTARLYFDCTHNMAEYEACSMGVQATIDMKV 305
                                     ELYPLTARL FDCTHNMAEYEACSMGVQA +DMKV
Sbjct: 1580 WTMMFDGASNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKV 1639

Query: 306  KKLKVFGDSMLVIHQPRGEWETRDVKLLPYKQLITQLSQEFDEISFDFLPRENNQVADAL 365
            KKLKVFGDSMLVIHQ RGEWETRDVKLLPYKQLIT+LSQEFDE+SFD+LPRENNQV DAL
Sbjct: 1640 KKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEMSFDYLPRENNQVXDAL 1699

Query: 366  ATLAVMFNLELNEDARPIKVGRRDVPASCMSIEKEPDGNPWFHDIKQYIKSKEYPPNASE 425
            ATLAVMFNLELNED  PIKVGRRDVPASCMSIE+EPDGNPWFHDIKQYI SKEYPPNASE
Sbjct: 1700 ATLAVMFNLELNEDVCPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYINSKEYPPNASE 1759

Query: 426  NDKCTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGREANWIMKEIHERVCGNHANGHMMA 485
            NDK T RKLAMKFFLNGEILYKRNHDMVLLRCVEGR+AN IM+E+HE VC  HANGHM+A
Sbjct: 1760 NDKRTFRKLAMKFFLNGEILYKRNHDMVLLRCVEGRDANRIMEEVHEGVCDTHANGHMIA 1819

Query: 486  RQILRASYYWLTIETDCIKYARKCHKCQIYSDKTYAPASHLQTLTASWPFSM 505
            RQILRA YYWLTI TDCIKYARKCHKCQIY+DKT+APASHL TLTA WPFSM
Sbjct: 1820 RQILRAGYYWLTIXTDCIKYARKCHKCQIYADKTHAPASHLHTLTAPWPFSM 1871

[Close]

BLAST of Moc11g16590 vs. ExPASy Swiss-Prot
Match: Q9HSF6 (Ribonuclease HI OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) OX=64091 GN=rnhA PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 4.2e-07
Identity = 32/87 (36.78%), Postives = 46/87 (52.87%), Query Frame = 0


Query: 251 THNMAEYEACSMGVQATIDMKVKKLKVFGDSMLVIHQPRGEWETRDVKLLPYKQLITQLS 310
           T+N AEY+A    ++A  D     +++ GDS LV  Q  G W+T D  L   +    +L 
Sbjct: 110 TNNQAEYDALIAALEAAADFGFDDIELRGDSQLVEKQLTGAWDTNDPDLRRKRVRARELL 169

Query: 311 QEFDEISFDFLPRENNQVADALATLAV 338
             FD+ S   +PR  N+ ADALA  A+
Sbjct: 170 TGFDDWSITHVPRATNERADALANEAL 196

[Close]

BLAST of Moc11g16590 vs. ExPASy Swiss-Prot
Match: P9WLH5 (Bifunctional protein Rv2228c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2228c PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.2e-06
Identity = 33/111 (29.73%), Postives = 53/111 (47.75%), Query Frame = 0


Query: 251 THNMAEYEACSMGVQATIDMKVKKLKVFGDSMLVIHQPRGEWETRDVKLLPYKQLITQLS 310
           T+N+AEY     G+   + +   +  V  DS LV+ Q  G W+ +   LL        L+
Sbjct: 44  TNNVAEYRGLIAGLDDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALA 103

Query: 311 QEFDEISFDFLPRENNQVADALATLAVMFNLE-LNEDARPIKVGRRDVPAS 361
            +F  I+++++PR  N  AD LA  A+    +    DA P K+   + P S
Sbjct: 104 SQFRRINYEWVPRARNTYADRLANDAMDAAAQSAAADADPAKIVATESPTS 154

[Close]

BLAST of Moc11g16590 vs. ExPASy Swiss-Prot
Match: P9WLH4 (Uncharacterized protein MT2287 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT2287 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.2e-06
Identity = 33/111 (29.73%), Postives = 53/111 (47.75%), Query Frame = 0


Query: 251 THNMAEYEACSMGVQATIDMKVKKLKVFGDSMLVIHQPRGEWETRDVKLLPYKQLITQLS 310
           T+N+AEY     G+   + +   +  V  DS LV+ Q  G W+ +   LL        L+
Sbjct: 44  TNNVAEYRGLIAGLDDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALA 103

Query: 311 QEFDEISFDFLPRENNQVADALATLAVMFNLE-LNEDARPIKVGRRDVPAS 361
            +F  I+++++PR  N  AD LA  A+    +    DA P K+   + P S
Sbjct: 104 SQFRRINYEWVPRARNTYADRLANDAMDAAAQSAAADADPAKIVATESPTS 154

[Close]

BLAST of Moc11g16590 vs. ExPASy Swiss-Prot
Match: P64956 (Uncharacterized protein Mb2253c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=BQ2027_MB2253C PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.2e-06
Identity = 33/111 (29.73%), Postives = 53/111 (47.75%), Query Frame = 0


Query: 251 THNMAEYEACSMGVQATIDMKVKKLKVFGDSMLVIHQPRGEWETRDVKLLPYKQLITQLS 310
           T+N+AEY     G+   + +   +  V  DS LV+ Q  G W+ +   LL        L+
Sbjct: 44  TNNVAEYRGLIAGLDDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALA 103

Query: 311 QEFDEISFDFLPRENNQVADALATLAVMFNLE-LNEDARPIKVGRRDVPAS 361
            +F  I+++++PR  N  AD LA  A+    +    DA P K+   + P S
Sbjct: 104 SQFRRINYEWVPRARNTYADRLANDAMDAAAQSAAADADPAKIVATESPTS 154

[Close]

BLAST of Moc11g16590 vs. ExPASy Swiss-Prot
Match: F9VN79 (Ribonuclease HI OS=Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) OX=273063 GN=rnhA PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 7.4e-04
Identity = 24/86 (27.91%), Postives = 49/86 (56.98%), Query Frame = 0


Query: 251 THNMAEYEACSMGVQATIDMKVKKLKVFGDSMLVIHQPRGEWETRDVKLLPYKQLITQLS 310
           T+N+AEY      ++  + + +    + GDS LVI Q  GE++ +  +++P  +   +L 
Sbjct: 47  TNNVAEYSGLICLMETMLRLGISSPIIKGDSQLVIKQMNGEYKVKAKRIIPLYEKAIELK 106

Query: 311 QEFDEISFDFLPRENNQVADALATLA 337
           ++ +  +  ++PRE N+ AD L+ +A
Sbjct: 107 KKLN-ATLIWVPREENKEADRLSRVA 131

[Close]

BLAST of Moc11g16590 vs. ExPASy TrEMBL
Match: A0A6J1E2J7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025431 PE=4 SV=1)

HSP 1 Score: 593.6 bits (1529), Expect = 7.8e-166
Identity = 291/353 (82.44%), Postives = 304/353 (86.12%), Query Frame = 0


Query: 185  WQVLLSEYDIVYVTQKAIKGSVMADHLAQQPINDYVPVKFDFPDEYISTITAR------- 244
            WQVLLSEYDIVYVT+KAIKGS +AD+LAQQPINDY+PVKFDFPDEYISTITA        
Sbjct: 1238 WQVLLSEYDIVYVTRKAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQ 1297

Query: 245  --------------------------ELYPLTARLYFDCTHNMAEYEACSMGVQATIDMK 304
                                      ELYPLTARL FDCTHNMAEYEACSMGVQA +DMK
Sbjct: 1298 TWTMMFDGASNELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMK 1357

Query: 305  VKKLKVFGDSMLVIHQPRGEWETRDVKLLPYKQLITQLSQEFDEISFDFLPRENNQVADA 364
            VKKLKVFGDSMLVIHQ RGEWETRDVKLLPYKQLIT+LSQEFDEISFD+LPRENNQVADA
Sbjct: 1358 VKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADA 1417

Query: 365  LATLAVMFNLELNEDARPIKVGRRDVPASCMSIEKEPDGNPWFHDIKQYIKSKEYPPNAS 424
            LATLAVMFNLELNED  PIKVGRRDVPASCMSIE+EPDGNPWFH+IK YIKSKEYPPNAS
Sbjct: 1418 LATLAVMFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIKXYIKSKEYPPNAS 1477

Query: 425  ENDKCTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGREANWIMKEIHERVCGNHANGHMM 484
            ENDK TLRKLAMKFFLNGEILYKRNHDMVLLRCVEGR+AN IM+E+HE VCG HANGHMM
Sbjct: 1478 ENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGRDANRIMEEVHEGVCGTHANGHMM 1537

Query: 485  ARQILRASYYWLTIETDCIKYARKCHKCQIYSDKTYAPASHLQTLTASWPFSM 505
            ARQILRA YYWLTI TDCIKYARKCHKCQIYSDKT+APASHL TLTA WPFSM
Sbjct: 1538 ARQILRAGYYWLTIXTDCIKYARKCHKCQIYSDKTHAPASHLHTLTAPWPFSM 1590

[Close]

BLAST of Moc11g16590 vs. ExPASy TrEMBL
Match: A0A6J1DZ90 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1)

HSP 1 Score: 593.2 bits (1528), Expect = 1.0e-165
Identity = 291/353 (82.44%), Postives = 302/353 (85.55%), Query Frame = 0


Query: 185  WQVLLSEYDIVYVTQKAIKGSVMADHLAQQPINDYVPVKFDFPDEYISTITAR------- 244
            WQVLLSEYDIVYVTQKAIKGS +AD+LAQQPINDY+PVKFDFPDEYISTITA        
Sbjct: 1067 WQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQ 1126

Query: 245  --------------------------ELYPLTARLYFDCTHNMAEYEACSMGVQATIDMK 304
                                      ELYPLT +L FDCTHNMAEYEACSMGVQA IDMK
Sbjct: 1127 TWTMMFDGASNELGHEIGAILISPKGELYPLTTKLCFDCTHNMAEYEACSMGVQAAIDMK 1186

Query: 305  VKKLKVFGDSMLVIHQPRGEWETRDVKLLPYKQLITQLSQEFDEISFDFLPRENNQVADA 364
            VKK KVFGDS LVIHQ RGEWETRDVKLLPYKQLIT+LSQEFDEISFD+LPRENNQVADA
Sbjct: 1187 VKKFKVFGDSTLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADA 1246

Query: 365  LATLAVMFNLELNEDARPIKVGRRDVPASCMSIEKEPDGNPWFHDIKQYIKSKEYPPNAS 424
            LATLAVMFNLELNED RPIKVGRRDVPASCMSIE+EPDGNPWFHDIKQYIKSKEY PNAS
Sbjct: 1247 LATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYIKSKEYQPNAS 1306

Query: 425  ENDKCTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGREANWIMKEIHERVCGNHANGHMM 484
            ENDK TLRKLAMKFFLNGEILYKRNHDMVLLRCVEGR+AN IM+E+HE VCG HANGHMM
Sbjct: 1307 ENDKRTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGRDANRIMEEVHEGVCGTHANGHMM 1366

Query: 485  ARQILRASYYWLTIETDCIKYARKCHKCQIYSDKTYAPASHLQTLTASWPFSM 505
            ARQILRA YYWLTIETDCIKYARKCHKCQIYSDKT+AP SHL TLTA WPFSM
Sbjct: 1367 ARQILRAGYYWLTIETDCIKYARKCHKCQIYSDKTHAPTSHLHTLTAPWPFSM 1419

[Close]

BLAST of Moc11g16590 vs. ExPASy TrEMBL
Match: A0A6J1DZ90 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.8e-03
Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 145 PHKELTETINLGSQAEAKVIKIGINMSSENRKKLIEFFHEW 186
           P   +TE  +LGSQAEAK IKIG +MSSE+RKKLIE  HE+
Sbjct: 606 PVDNITEVGDLGSQAEAKEIKIGTHMSSESRKKLIELLHEY 646

HSP 2 Score: 592.8 bits (1527), Expect = 1.3e-165
Identity = 292/353 (82.72%), Postives = 302/353 (85.55%), Query Frame = 0


Query: 185  WQVLLSEYDIVYVTQKAIKGSVMADHLAQQPINDYVPVKFDFPDEYISTITAR------- 244
            WQVLLSEYDIVYVTQKAIKGS +AD+LAQQPINDY+PVKFDFPDEYISTITA        
Sbjct: 1629 WQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQ 1688

Query: 245  --------------------------ELYPLTARLYFDCTHNMAEYEACSMGVQATIDMK 304
                                      ELYPL ARL FDC HNMAEYEACSMGVQA IDMK
Sbjct: 1689 TWTMMFDGASNELGHGIGAILISPKGELYPLIARLCFDCKHNMAEYEACSMGVQAAIDMK 1748

Query: 305  VKKLKVFGDSMLVIHQPRGEWETRDVKLLPYKQLITQLSQEFDEISFDFLPRENNQVADA 364
            VKKLKVFGDSMLVIHQ RGEWETRDVKLLPYKQ IT+LSQEFDEISFD+LPRENNQVADA
Sbjct: 1749 VKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQFITELSQEFDEISFDYLPRENNQVADA 1808

Query: 365  LATLAVMFNLELNEDARPIKVGRRDVPASCMSIEKEPDGNPWFHDIKQYIKSKEYPPNAS 424
            LATLAVMFNLELNED RPIKVGRRDVPASCMSIE+EPDG PWFHDIKQYIKSKEYPPNAS
Sbjct: 1809 LATLAVMFNLELNEDVRPIKVGRRDVPASCMSIEEEPDGKPWFHDIKQYIKSKEYPPNAS 1868

Query: 425  ENDKCTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGREANWIMKEIHERVCGNHANGHMM 484
            ENDK TLRKLA+KFFLNGEILYKRNHDMVLLRCVEGR+AN IM+EIHE VCG HANGHMM
Sbjct: 1869 ENDKRTLRKLAIKFFLNGEILYKRNHDMVLLRCVEGRDANRIMEEIHEGVCGTHANGHMM 1928

Query: 485  ARQILRASYYWLTIETDCIKYARKCHKCQIYSDKTYAPASHLQTLTASWPFSM 505
            ARQILRA YYWLTIETDCIKYARKCHKCQIYSDKT+APASHL  LTA WPFSM
Sbjct: 1929 ARQILRAGYYWLTIETDCIKYARKCHKCQIYSDKTHAPASHLHALTAPWPFSM 1981

[Close]

BLAST of Moc11g16590 vs. ExPASy TrEMBL
Match: A0A6J1D099 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-26
Identity = 67/78 (85.90%), Postives = 73/78 (93.59%), Query Frame = 0


Query: 108  KYELDTPIYNIESDEEIDEEPSAELLRMLEEEEKMLGPHKELTETINLGSQAEAKVIKIG 167
            KYELDTPIY IESDEEID+EPSAELLRMLEEEEKMLGPH+ELTET+NLGSQAEAK IKIG
Sbjct: 1131 KYELDTPIYIIESDEEIDDEPSAELLRMLEEEEKMLGPHEELTETLNLGSQAEAKEIKIG 1190

Query: 168  INMSSENRKKLIEFFHEW 186
             +MSSE+RKKLIE  HE+
Sbjct: 1191 THMSSESRKKLIELLHEY 1208

HSP 2 Score: 583.6 bits (1503), Expect = 8.1e-163
Identity = 289/353 (81.87%), Postives = 301/353 (85.27%), Query Frame = 0


Query: 185  WQVLLSEYDIVYVTQKAIKGSVMADHLAQQPINDYVPVKFDFPDEYISTITAR------- 244
            WQVLLSEYDIVYVTQKAIKGS +AD+LAQQPINDY+PVKFDFPDEYISTITA        
Sbjct: 1034 WQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQ 1093

Query: 245  --------------------------ELYPLTARLYFDCTHNMAEYEACSMGVQATIDMK 304
                                      ELYPLTARL FDCTHNMAEYEACSMGVQA +DMK
Sbjct: 1094 TWTMMFDGASNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMK 1153

Query: 305  VKKLKVFGDSMLVIHQPRGEWETRDVKLLPYKQLITQLSQEFDEISFDFLPRENNQVADA 364
            V K KVFGDSMLVIHQ RGEWE RDVKLLPYKQLIT+LSQEFDEISFD+LPRENNQVADA
Sbjct: 1154 V-KXKVFGDSMLVIHQLRGEWEIRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADA 1213

Query: 365  LATLAVMFNLELNEDARPIKVGRRDVPASCMSIEKEPDGNPWFHDIKQYIKSKEYPPNAS 424
            LATLAVMFNLELNED RPIKVGRRDV ASCMSIE+EPDGNPWFHDIKQYIKSKEYPPNAS
Sbjct: 1214 LATLAVMFNLELNEDVRPIKVGRRDVSASCMSIEEEPDGNPWFHDIKQYIKSKEYPPNAS 1273

Query: 425  ENDKCTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGREANWIMKEIHERVCGNHANGHMM 484
            ENDK TLRKLAMKFFLN EILYKRNHDMVLLRCVE R+AN IM+E+HE VCG HANGHM+
Sbjct: 1274 ENDKRTLRKLAMKFFLNREILYKRNHDMVLLRCVEXRDANRIMEEVHEEVCGTHANGHMI 1333

Query: 485  ARQILRASYYWLTIETDCIKYARKCHKCQIYSDKTYAPASHLQTLTASWPFSM 505
            ARQILRA YYWLTIETDCIKYARKCHKCQIYSDKT+APASHL TLTA WPFSM
Sbjct: 1334 ARQILRAGYYWLTIETDCIKYARKCHKCQIYSDKTHAPASHLHTLTAPWPFSM 1385

[Close]

BLAST of Moc11g16590 vs. ExPASy TrEMBL
Match: A0A6J1D7C7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111018303 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.0e-27
Identity = 68/78 (87.18%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 108 KYELDTPIYNIESDEEIDEEPSAELLRMLEEEEKMLGPHKELTETINLGSQAEAKVIKIG 167
           KYELDTPIYNIESDEEID+EPSAELLRMLEEEEKMLGPH+ELTET+NLGSQAEAK IKIG
Sbjct: 551 KYELDTPIYNIESDEEIDDEPSAELLRMLEEEEKMLGPHEELTETLNLGSQAEAKEIKIG 610

Query: 168 INMSSENRKKLIEFFHEW 186
            +MSSE+RKKLIE  HE+
Sbjct: 611 THMSSESRKKLIELLHEY 628

HSP 2 Score: 582.4 bits (1500), Expect = 1.8e-162
Identity = 286/352 (81.25%), Postives = 300/352 (85.23%), Query Frame = 0


Query: 186  QVLLSEYDIVYVTQKAIKGSVMADHLAQQPINDYVPVKFDFPDEYISTITAR-------- 245
            QVLLSEYDIVYVTQKAIKGS +AD+LAQQPINDY+PVKFDFPDEYISTITA         
Sbjct: 1520 QVLLSEYDIVYVTQKAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQT 1579

Query: 246  -------------------------ELYPLTARLYFDCTHNMAEYEACSMGVQATIDMKV 305
                                     ELYPLTARL FDCTHNMAEYEACSMGVQA +DMKV
Sbjct: 1580 WTMMFDGASNELGHGIGAILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKV 1639

Query: 306  KKLKVFGDSMLVIHQPRGEWETRDVKLLPYKQLITQLSQEFDEISFDFLPRENNQVADAL 365
            KKLKVFGDSMLVIHQ RGEWETRDVKLLPYKQLIT+LSQEFDE+SFD+LPRENNQV DAL
Sbjct: 1640 KKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEMSFDYLPRENNQVXDAL 1699

Query: 366  ATLAVMFNLELNEDARPIKVGRRDVPASCMSIEKEPDGNPWFHDIKQYIKSKEYPPNASE 425
            ATLAVMFNLELNED  PIKVGRRDVPASCMSIE+EPDGNPWFHDIKQYI SKEYPPNASE
Sbjct: 1700 ATLAVMFNLELNEDVCPIKVGRRDVPASCMSIEEEPDGNPWFHDIKQYINSKEYPPNASE 1759

Query: 426  NDKCTLRKLAMKFFLNGEILYKRNHDMVLLRCVEGREANWIMKEIHERVCGNHANGHMMA 485
            NDK T RKLAMKFFLNGEILYKRNHDMVLLRCVEGR+AN IM+E+HE VC  HANGHM+A
Sbjct: 1760 NDKRTFRKLAMKFFLNGEILYKRNHDMVLLRCVEGRDANRIMEEVHEGVCDTHANGHMIA 1819

Query: 486  RQILRASYYWLTIETDCIKYARKCHKCQIYSDKTYAPASHLQTLTASWPFSM 505
            RQILRA YYWLTI TDCIKYARKCHKCQIY+DKT+APASHL TLTA WPFSM
Sbjct: 1820 RQILRAGYYWLTIXTDCIKYARKCHKCQIYADKTHAPASHLHTLTAPWPFSM 1871

[Close]

BLAST of Moc11g16590 vs. TAIR 10
Match: AT1G24090.1 (RNase H family protein )

HSP 1 Score: 47.4 bits (111), Expect = 4.0e-05
Identity = 29/87 (33.33%), Postives = 41/87 (47.13%), Query Frame = 0


Query: 251 THNMAEYEACSMGVQATIDMKVKKLKVFGDSMLVIHQPRGEWETRDVKLLPYKQLITQLS 310
           T+N AEY A  +G++  I+   K +KV GDS LV  Q +G+W+     L    +    L 
Sbjct: 257 TNNAAEYHALILGLKYAIEKGYKNIKVKGDSKLVCMQIKGQWKVNHEVLAKLHKEAKLLC 316

Query: 311 QEFDEISFDFLPRENNQVADALATLAV 338
            +        + R  N  AD  A LAV
Sbjct: 317 NKCVSFEISHVLRNLNADADEQANLAV 343

The following BLAST results are available for this feature:

BLAST of Moc11g16590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158986.1	1.6e-165	82.44	LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]	[more]
XP_022157796.1	2.1e-165	82.44	LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]	[more]
XP_022157796.1	7.9e-03	65.85	LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]	[more]
XP_022147189.1	2.3e-26	85.90	LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]	[more]
XP_022150030.1	2.1e-27	87.18	LOW QUALITY PROTEIN: uncharacterized protein LOC111018303 [Momordica charantia]	[more]

Pages

BLAST of Moc11g16590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9HSF6	4.2e-07	36.78	Ribonuclease HI OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC...	[more]
P9WLH5	1.2e-06	29.73	Bifunctional protein Rv2228c OS=Mycobacterium tuberculosis (strain ATCC 25618 / ...	[more]
P9WLH4	1.2e-06	29.73	Uncharacterized protein MT2287 OS=Mycobacterium tuberculosis (strain CDC 1551 / ...	[more]
P64956	1.2e-06	29.73	Uncharacterized protein Mb2253c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF...	[more]
F9VN79	7.4e-04	27.91	Ribonuclease HI OS=Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC ...	[more]

BLAST of Moc11g16590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E2J7	7.8e-166	82.44	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025431 PE=4 SV=1	[more]
A0A6J1DZ90	1.0e-165	82.44	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1	[more]
A0A6J1DZ90	3.8e-03	65.85	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1	[more]
A0A6J1D099	1.1e-26	85.90	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1	[more]
A0A6J1D7C7	1.0e-27	87.18	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111018303 PE=4 SV=1	[more]

Pages

BLAST of Moc11g16590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24090.1	4.0e-05	33.33	RNase H family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.70		coord: 390..482 e-value: 2.1E-12 score: 49.1
None	No IPR available	PANTHER	PTHR24559:SF322	RNA-DIRECTED DNA POLYMERASE (REVERSE TRANSCRIPTASE), RIBONUCLEASE H-LIKE PROTEIN	coord: 240..487
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 240..487
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 185..231 coord: 109..184
None	No IPR available	PANTHER	PTHR24559:SF322	RNA-DIRECTED DNA POLYMERASE (REVERSE TRANSCRIPTASE), RIBONUCLEASE H-LIKE PROTEIN	coord: 185..231 coord: 109..184
None	No IPR available	CDD	cd09279	RNase_HI_like	coord: 237..336 e-value: 1.68405E-30 score: 113.336
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 230..345 e-value: 2.9E-22 score: 81.0
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 431..482 e-value: 1.6E-6 score: 28.1
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 251..336 e-value: 1.1E-16 score: 60.8
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 242..333

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g16590.1	Moc11g16590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0015074	DNA integration
biological_process	GO:0006310	DNA recombination
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0030430	host cell cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0003676	nucleic acid binding