Moc11g14850 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g14850
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr11: 11094681 .. 11098747 (+)
RNA-Seq Expression	Moc11g14850
Synteny	Moc11g14850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTTGATGAAGGCTTTGACTGACAGGTATGAAAAACCTTTTGCCAATAGTAAGGTATATCTCATTACGAGGTACTTCAATATCCATATGGAGGAGGATACCTTAGTGAACTCCTACATAAATGAGATCAATGATTTGATGAACAAGTTGAAGTCTATAGAGCTAACTTTTTCAGAGGAGGTGAAGGCTGTAAAACTGCTGTCCTCTTTGCCTGACAATTGGAAGACGATGAAGACAACAGTGTCAAATTTGTTGGGGGATAAGAGTCTGAAATTTCAGATATCTATGACGCTGACAATTGCTGAATAATTTCGTAGAAAAGGGAGTGAGAAGAATTATGCATCCACATTCGGAGGGGAGAACAGTTTTGAATCAGCATTAGTAGCTCAGAGTAAGGGGCAAAGGGAAGATGAACTACAAGGGAAAACAACAGTATAGTAGCCAAAGGAGTGGGAGCAGCAGTGGAGATGTGAAGTGTTTTTACTACCACAAGAAGAGACACATTAAGAGGTTTTGCAAGAAGCTTAAGGAGGATCAACAGTAGGGGATTCCACTAATGTTGTAGAAGAAAGAATAGAAGAGTTTCTAGCTTGTGATGATAGCAACTTAGTAGATCGACCATCAGAGTGGGTTGTGGACACAGCAGCATCAACACATGTATCTTTAGACAGAAATTGGTTCACATCTTTTACTAGTCGGCATGGCGAGGTAAGAATGGACAATAAGAGAGTTTTCAAGGTCAGAGGAATTGGGATGTCTATTTGAAGACCGATGGGGAAAAAAGTTGGTTTTGTGAGTTGTCAAGTATGTTCTAGGTTTTAGAAAGAATTTGTTATCTGCTGGAAAACTGGATGACGATGGTTTCAAGAGTGAGTTCGCAGAGGGTAGCTGGAAACTTCTGAGGGGATTTGAGGTAGTGACAGTGGGCCACAAGGAAGCTTCAGTTTATGTGTCTAGATTTGAGGTTGCAAGGGGATCTGAGAGACAAAGGATGTATAGAGCTACAGATGGTTCATGGTGAGACTTGAAAGAATCAGCAGCAATAACAACTAGGATAGAAGAAAAAAATATGTCATCAGTTCAAGTACAACAGGGACCACTTAGATCGAGTGGAAGCACGTGACTGTGTCTCTAACGTCTGGGAGAAAAAAACATGTAAAATTACTAAGTCTTGGAGAAATCACAAATAGAGTCTTGGTTGGTGCCAAGAATATGTTAGAAGTTATCGATGTAGTGGGAGTAAAGCCTTTTGATCGGTGCCAAAAAGATGTTGATCAGTTAGAAACTATTGGTGCAGTCAGAACTAAAACACGAGGGACATTGTCGTACATCAGTCGTGAGAGGGATTGTACAGCAGCTGTTTTGGGAGGTTTTGGCAGCAATTTTGTAGTAATGGCTCGGGTTTTGGCAGTGCAGAAAGGTCAGAGTATTTTGGGATAATTTAGATCTTGATTATTCTGTGAGTTTTTCATTCCTATAGCTAAGTATATTGTATTAAATACTTAGAAGCTAGGGGCTTTTTATTGGGACATTTATAGGGTGAATATCTGAGGGAGATATTTGACTGCTTTGCATCCAATCTCATATTATAGTGGAACCCGCATCTAAGCAGAATACTGACTGTACATAGCCCATAAACTGTTGGGATGAACCAGTATAAATTTTTTTGTCGTTTATTGCTTTCCCTATAATCTCTTATTTGTGTTGTGTGATTGTGAGTTACTAGATATAATAATAGTGGAAAGGGAAATTGATTTGGAGCGCGTTAATTTCCCAACAATAAATGTATTGAGGATCATTTAAAAGGCTTCATGTCGTTCTTATTTATTAGTAATAAAAGTTATTTCTATTACTGAAAAAAATGTTTTTAAAACATTTTTTCTATAAGTAGTTTTGGAAAGTAATTTAAAGTGTGTTTAGTATAGTTTTCTAAGTAATTTTAGAGGATTAGAAGTACTTTTCTAAAAATCTATTGTATTGGTAAAAATGTGAGATTGCTTTAAAAACCTTTTTGAGAAATATTTGAAAGAGGATCATCCAAAAAGTGACTTGAAAGTGATTGACACTTGTTTAATCAAAAAATTGATCAAGTCAGTAGCGAAGCTCAAACTAGCTTACCTATGAGCGGAAGGACCTACAAAGGAGAATAACAGCTTCGACACTCAAGTCATAACTTATATGATCTATTACTCCAGAAGTAATAGTTTCGCGTACTGTCAAATGAGGTGAGAATCTTTATTTATAGAGGTGAGCTTCCAACAGGTACTCCTCCAACAATGCTTCAACGACTCATCAACAGCCTTGAGAATTGTGACGTGTTGTATGAGAGTATGTTACTGGCACCCGTCCATAGATCAGCTTCAGCCAACCCCTATAGTCAAACCCTATAATAAGGATTATCCCAATAGGTTTTACTTGTCAGCTTGTATGAAATGTAGCAAACTAGTCCTAAACCCTTCATCGAACAAAAATTGGAAGGAGCATTGATTCTTCTACAAGAAATTTGAGTTTTACGGACACACAAAATCGTCGCCATAACTCAATATTTCGTTGAAAAAACTCTCTCTTGATGGTTTTGTTTCGTCGCAAAGTTCCCCGAAAGATCCCTGTCGCGATAGAAATTTGGCGACAAATTTCAGATTTTGTTTCCAAGGTCTTTCGCTTTGCCGCCAAATATACCTATCGCGATGAAATATGAATGTTGTCACCAGTGGTCTTTGGTGACGAAATCTAAAATTCGTTGCCAAAGGTTTAATTTTATAAAATATACATTTAAAAATTGTTTGCACACCTATTCTATTTTATCTTGGTACAATCTTGTTACCTAAATATTTCTTCAAATTTAAATCAGACTCCATAAACACGGCTTAAAAATTATCATATAAACTTATATTTATATTAAACAGAAAGTGATTTTACAATCGATCGAGTACAGAAAGTCAAATACAACATAAGCTAAATTTCGACTACAACGTAATCTAAAAGGCCTATCTGCTTTTGGCTTCATGAACCTCGCTAATTTCCAAAGCTTCCTAGAGAAAAATCAAAATAACCTGAAAAGGCAAATGACAAATAAACCGATGTGAACAAAGAGTTGTGTACCTAACTTATTCCACTACATTTTAGCTGAAAAATGTTAATTACGTAAGAAAAGTTAACTTTAGACAAGCAAAGTAGCAGTAAAGTAAACAAAAAAATTAACTTCAAGTATAACCTAAGTGGTGCCAAAGAATTCAAAATGATCTTAAACACACATAACTTACCCTAATTGAACTTAAATAAGCTAAATTGATATTTAAGTGGCAACAATATAATCCAATGTCACAAACTCACCCCCTTGCCATAAACTCACCAAGATAAACATTCAAGGACAAAACAAACATTTCTAACCAAAATTCGCTTCACACCGAACCACTTCAAGTTCAACAAACTCATCGAAGCACACTTCAAATATAAAAACTTATCCAAACTACTTAATAATCTTAAAAACATTCTCAGTTCACTCCACATACCATAAATTTACCAAACTAATAAACTCTTAAAGTCAAAACAAACAAGTCTATAACTCATCCAAACTCACTCCACATCCCACAAGCTAACTCAAAAACATTTCACATCCGAGAAACTCACTCAAATTAACCATTAAAAGACGTGACCAACTCACCCATCCCATCACTCCACATCCCACTAACTCATCCAAATTAACCAATAAAAAGAAACTCGTTTGACTCACATACGGGATCATCTCCAATCTGTGCCTCGTGATCCAGACACTCCAGGAACTCGGTTCTTGGCTTTGATCCAATTCCGAAGCTCGTTTGCTCACTAGCCACGAAAATCAAAACCCATTGTCATGTTATGCGAAGGACGTTTTCTTCTCTACCTTCTCCTCTCAAAAGACCAAGGGAGAGACTACATCCCTTTCCTTCGGTAGCTCTTTTGGTTCTATGCCCCTGCCCTCCAAACAGTATGGGAGCCTTTCAGCTCGTACTGCTCACACTCCTAGAACATGCCGGGACGACGAGAATGAGAAGAAGGAGGGACTTGAGGCCTCAACCAGATAG

mRNA sequence

ATGAGGTTGATGAAGGCTTTGACTGACAGGTATGAAAAACCTTTTGCCAATAGTAAGGTATATCTCATTACGAGGTACTTCAATATCCATATGGAGGAGGATACCTTAGTGAACTCCTACATAAATGAGATCAATGATTTGATGAACAAGTTGAAGTCTATAGAGCTAACTTTTTCAGAGGAGGTGAAGGCTGTAAAACTGCTGTCCTCTTTGCCTGACAATTGGAAGACGATGAAGACAACAGTGTCAAATTTAAAAGGGAGTGAGAAGAATTATGCATCCACATTCGGAGGGGAGAACAGTTTTGAATCAGCATTAGTAGCTCAGAGTTTTAGAAAGAATTTGTTATCTGCTGGAAAACTGGATGACGATGGTTTCAAGAGTGAGTTCGCAGAGGGTAGCTGGAAACTTCTGAGGGGATTTGAGGTAGTGACAGTGGGCCACAAGGAAGCTTCAGTTTATGTGTCTAGATTTGAGGTTGCAAGGGGATCTGAGAGACAAAGGATGTATAGAGCTACAGATGGTTCATGTCTTGGAGAAATCACAAATAGAGTCTTGGTTGGTGCCAAGAATATGTTAGAAGTTATCGATGTAGTGGGAGTAAAGCCTTTTGATCGGTGCCAAAAAGATGTTGATCAGTTAGAAACTATTGGTGCAGTCAGAACTAAAACACGAGGGACATTGTCGTACATCAGTCGTGAGAGGGATTGTACAGCAGCTGTTTTGGGAGGTTTTGGCAGCAATTTTGTAGTAATGGCTCGGGTTTTGGCAGTGCAGAAAGGTACTCCTCCAACAATGCTTCAACGACTCATCAACAGCCTTGAGAATTGTGACGTGTTCCACGAAAATCAAAACCCATTGTCATGTTATGCGAAGGACGTTTTCTTCTCTACCTTCTCCTCTCAAAAGACCAAGGGAGAGACTACATCCCTTTCCTTCGGTAGCTCTTTTGGTTCTATGCCCCTGCCCTCCAAACAGTATGGGAGCCTTTCAGCTCGTACTGCTCACACTCCTAGAACATGCCGGGACGACGAGAATGAGAAGAAGGAGGGACTTGAGGCCTCAACCAGATAG

Coding sequence (CDS)

ATGAGGTTGATGAAGGCTTTGACTGACAGGTATGAAAAACCTTTTGCCAATAGTAAGGTATATCTCATTACGAGGTACTTCAATATCCATATGGAGGAGGATACCTTAGTGAACTCCTACATAAATGAGATCAATGATTTGATGAACAAGTTGAAGTCTATAGAGCTAACTTTTTCAGAGGAGGTGAAGGCTGTAAAACTGCTGTCCTCTTTGCCTGACAATTGGAAGACGATGAAGACAACAGTGTCAAATTTAAAAGGGAGTGAGAAGAATTATGCATCCACATTCGGAGGGGAGAACAGTTTTGAATCAGCATTAGTAGCTCAGAGTTTTAGAAAGAATTTGTTATCTGCTGGAAAACTGGATGACGATGGTTTCAAGAGTGAGTTCGCAGAGGGTAGCTGGAAACTTCTGAGGGGATTTGAGGTAGTGACAGTGGGCCACAAGGAAGCTTCAGTTTATGTGTCTAGATTTGAGGTTGCAAGGGGATCTGAGAGACAAAGGATGTATAGAGCTACAGATGGTTCATGTCTTGGAGAAATCACAAATAGAGTCTTGGTTGGTGCCAAGAATATGTTAGAAGTTATCGATGTAGTGGGAGTAAAGCCTTTTGATCGGTGCCAAAAAGATGTTGATCAGTTAGAAACTATTGGTGCAGTCAGAACTAAAACACGAGGGACATTGTCGTACATCAGTCGTGAGAGGGATTGTACAGCAGCTGTTTTGGGAGGTTTTGGCAGCAATTTTGTAGTAATGGCTCGGGTTTTGGCAGTGCAGAAAGGTACTCCTCCAACAATGCTTCAACGACTCATCAACAGCCTTGAGAATTGTGACGTGTTCCACGAAAATCAAAACCCATTGTCATGTTATGCGAAGGACGTTTTCTTCTCTACCTTCTCCTCTCAAAAGACCAAGGGAGAGACTACATCCCTTTCCTTCGGTAGCTCTTTTGGTTCTATGCCCCTGCCCTCCAAACAGTATGGGAGCCTTTCAGCTCGTACTGCTCACACTCCTAGAACATGCCGGGACGACGAGAATGAGAAGAAGGAGGGACTTGAGGCCTCAACCAGATAG

Protein sequence

MRLMKALTDRYEKPFANSKVYLITRYFNIHMEEDTLVNSYINEINDLMNKLKSIELTFSEEVKAVKLLSSLPDNWKTMKTTVSNLKGSEKNYASTFGGENSFESALVAQSFRKNLLSAGKLDDDGFKSEFAEGSWKLLRGFEVVTVGHKEASVYVSRFEVARGSERQRMYRATDGSCLGEITNRVLVGAKNMLEVIDVVGVKPFDRCQKDVDQLETIGAVRTKTRGTLSYISRERDCTAAVLGGFGSNFVVMARVLAVQKGTPPTMLQRLINSLENCDVFHENQNPLSCYAKDVFFSTFSSQKTKGETTSLSFGSSFGSMPLPSKQYGSLSARTAHTPRTCRDDENEKKEGLEASTR

Homology

[Close]

BLAST of Moc11g14850 vs. NCBI nr
Match: RVW32946.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 104.0 bits (258), Expect = 2.8e-18
Identity = 61/178 (34.27%), Postives = 103/178 (57.87%), Query Frame = 0


Query: 3   LMKALTDRYEKPFANSKVYLITRYFNIHMEEDTLVNSYINEINDLMNKLKSIELTFSEEV 62
           LMKAL+  YEKPFAN+KV+L+ + FN++M E+  V  ++NE N ++N+L S+E+ F +E+
Sbjct: 84  LMKALSGMYEKPFANNKVHLMKKLFNLNMVENASVAQHLNEFNTIINQLSSVEIDFDDEI 143

Query: 63  KAVKLLSSLPDNWKTMKTTV-------SNLKGSEKNYAS------TFGGE-------NSF 122
           + + +L+SLP++W+ M+  +       ++  GS  N  +        G E       N F
Sbjct: 144 RVLIVLASLPNSWEAMRMIIRRRDADKTSGSGSALNLETRGRALDVMGLEDVRISLPNGF 203

Query: 123 ----ESALVAQSFRKNLLSAGKLDDDGFKSEFAEGSWKLLRGFEVVTVGHKEASVYVS 157
               E        R+NL+S G+LDD+G    F  G+WK+ +G  V+  G+K  ++Y++
Sbjct: 204 VWLLEKVRHIPDLRRNLISIGQLDDEGHAILFVGGTWKVTKGARVLARGNKTGTLYMT 261

[Close]

BLAST of Moc11g14850 vs. NCBI nr
Match: VFQ62995.1 (unnamed protein product [Cuscuta campestris])

HSP 1 Score: 100.1 bits (248), Expect = 4.0e-17
Identity = 56/153 (36.60%), Postives = 92/153 (60.13%), Query Frame = 0


Query: 3   LMKALTDRYEKPFANSKVYLITRYFNIHMEEDTLVNSYINEINDLMNKLKSIELTFSEEV 62
           +M AL++ YEKP A +KV+LI    N  M+E T V  +IN++N ++ +L S+ + F +EV
Sbjct: 60  IMDALSNMYEKPSAANKVFLIRELVNTKMKEGTSVTEHINKLNSILARLLSVGIKFDDEV 119

Query: 63  KAVKLLSSLPDNWKTMKTTVSNLKGSEKNYASTFGGENSFESALVAQSFRKNLLSAGKLD 122
           +A+ LLSSLPD+W    T V+   G +     TF      +   V  + +K+L+S  +LD
Sbjct: 120 QALLLLSSLPDSWSGTVTAVTGSVGPD---GFTFDQIRDLD-VKVVPALKKSLISVRQLD 179

Query: 123 DDGFKSEFAEGSWKLLRGFEVVTVGHKEASVYV 156
           + G + +F +G WK+++G  V+  G K  S+Y+
Sbjct: 180 EQGHEVKFRDGQWKVVKGNLVMARGRKRGSLYM 208

[Close]

BLAST of Moc11g14850 vs. NCBI nr
Match: CAN81058.1 (hypothetical protein VITISV_033322 [Vitis vinifera])

HSP 1 Score: 97.4 bits (241), Expect = 2.6e-16
Identity = 64/213 (30.05%), Postives = 103/213 (48.36%), Query Frame = 0


Query: 3   LMKALTDRYEKPFANSKVYLITRYFNIHMEEDTLVNSYINEINDLMNKLKSIELTFSEEV 62
           LMKAL+  YEKP AN+KV+L+ + FN+ M E+  V  ++NE N + N+L SI++ F +E+
Sbjct: 72  LMKALSGMYEKPSANNKVHLMKKLFNLKMVENASVAQHLNEFNIITNQLSSIKIDFDDEI 131

Query: 63  KAVKLLSSLPDNWKTMKTTVSNLKGSEK--------------------NYASTFGGENSF 122
           +A+ +L+SLP++W+ M+  +SN  G EK                       S FG   + 
Sbjct: 132 RALIVLASLPNSWEAMRMAISNSTGKEKLKYNDIRDLILVEEIHRRDAGETSGFGAALNL 191

Query: 123 ES--------------------------ALVAQSF-------------RKNLLSAGKLDD 157
           E+                           L+   F             R+NL+S G+LDD
Sbjct: 192 ETRRRGDFSKVYLADGSTLDVVGLGDVWILLPNGFVWLLEKVRHIPDLRRNLISVGQLDD 251

[Close]

BLAST of Moc11g14850 vs. NCBI nr
Match: RVW41523.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 97.1 bits (240), Expect = 3.4e-16
Identity = 64/219 (29.22%), Postives = 102/219 (46.58%), Query Frame = 0


Query: 3   LMKALTDRYEKPFANSKVYLITRYFNIHMEEDTLVNSYINEINDLMNKLKSIELTFSEEV 62
           LMKAL+  YEKP AN+KV+L+ + FN+ M E+  V  ++NE N + N+L S+E+ F +E+
Sbjct: 84  LMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTITNQLSSVEIDFDDEI 143

Query: 63  KAVKLLSSLPDNWKTMKTTVSNLKGSEK------------------NYASTFG------- 122
           +A+ +L+SLP++W+ M+  VSN  G EK                  +   T G       
Sbjct: 144 RALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRRDAGETSGSGSALNL 203

Query: 123 ---GENSFESALV-------------------------------------AQSFRKNLLS 157
              G    + AL+                                         R+NL+S
Sbjct: 204 ETRGREEVQDALLLAVDSPLDDWPLDVVGLGDVRISLPNGSVWLLEKVRHIPDLRRNLIS 263

[Close]

BLAST of Moc11g14850 vs. NCBI nr
Match: CAN80715.1 (hypothetical protein VITISV_042933 [Vitis vinifera])

HSP 1 Score: 97.1 bits (240), Expect = 3.4e-16
Identity = 61/201 (30.35%), Postives = 96/201 (47.76%), Query Frame = 0


Query: 3   LMKALTDRYEKPFANSKVYLITRYFNIHMEEDTLVNSYINEINDLMNKLKSIELTFSEEV 62
           LMKAL+  YEK   N+KV+L+ + FN+ M E+ LV  ++NE N + N+L S+E+ F +E+
Sbjct: 46  LMKALSGXYEKXSXNNKVHLMKKLFNLKMTENALVAQHLNEFNAITNQLSSVEIDFDDEI 105

Query: 63  KAVKLLSSLPDNWKTMKTTVSNLKGSEK--------------------------NYASTF 122
           +A+ +L+SLP++W+ M+  VSN  G EK                           YA   
Sbjct: 106 RALIVLASLPNSWEAMRMAVSNSMGKEKLKYNDIRDLILAEEIPRRDVGETSGSGYALNL 165

Query: 123 ---------------------GGENSFESALVAQSFRKNLLSAGKLDDDGFKSEFAEGSW 157
                                G     E        R+NL+S G+LDD+G    F   +W
Sbjct: 166 ETRGRALDVVGLGDVRISLPNGSVWLLEKVRHIPDLRRNLISVGQLDDEGHAILFVSSTW 225

[Close]

BLAST of Moc11g14850 vs. ExPASy TrEMBL
Match: A0A438DBW3 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_3146 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.3e-18
Identity = 61/178 (34.27%), Postives = 103/178 (57.87%), Query Frame = 0


Query: 3   LMKALTDRYEKPFANSKVYLITRYFNIHMEEDTLVNSYINEINDLMNKLKSIELTFSEEV 62
           LMKAL+  YEKPFAN+KV+L+ + FN++M E+  V  ++NE N ++N+L S+E+ F +E+
Sbjct: 84  LMKALSGMYEKPFANNKVHLMKKLFNLNMVENASVAQHLNEFNTIINQLSSVEIDFDDEI 143

Query: 63  KAVKLLSSLPDNWKTMKTTV-------SNLKGSEKNYAS------TFGGE-------NSF 122
           + + +L+SLP++W+ M+  +       ++  GS  N  +        G E       N F
Sbjct: 144 RVLIVLASLPNSWEAMRMIIRRRDADKTSGSGSALNLETRGRALDVMGLEDVRISLPNGF 203

Query: 123 ----ESALVAQSFRKNLLSAGKLDDDGFKSEFAEGSWKLLRGFEVVTVGHKEASVYVS 157
               E        R+NL+S G+LDD+G    F  G+WK+ +G  V+  G+K  ++Y++
Sbjct: 204 VWLLEKVRHIPDLRRNLISIGQLDDEGHAILFVGGTWKVTKGARVLARGNKTGTLYMT 261

[Close]

BLAST of Moc11g14850 vs. ExPASy TrEMBL
Match: A0A484KEW5 (CCHC-type domain-containing protein OS=Cuscuta campestris OX=132261 GN=CCAM_LOCUS4771 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.9e-17
Identity = 56/153 (36.60%), Postives = 92/153 (60.13%), Query Frame = 0


Query: 3   LMKALTDRYEKPFANSKVYLITRYFNIHMEEDTLVNSYINEINDLMNKLKSIELTFSEEV 62
           +M AL++ YEKP A +KV+LI    N  M+E T V  +IN++N ++ +L S+ + F +EV
Sbjct: 60  IMDALSNMYEKPSAANKVFLIRELVNTKMKEGTSVTEHINKLNSILARLLSVGIKFDDEV 119

Query: 63  KAVKLLSSLPDNWKTMKTTVSNLKGSEKNYASTFGGENSFESALVAQSFRKNLLSAGKLD 122
           +A+ LLSSLPD+W    T V+   G +     TF      +   V  + +K+L+S  +LD
Sbjct: 120 QALLLLSSLPDSWSGTVTAVTGSVGPD---GFTFDQIRDLD-VKVVPALKKSLISVRQLD 179

Query: 123 DDGFKSEFAEGSWKLLRGFEVVTVGHKEASVYV 156
           + G + +F +G WK+++G  V+  G K  S+Y+
Sbjct: 180 EQGHEVKFRDGQWKVVKGNLVMARGRKRGSLYM 208

[Close]

BLAST of Moc11g14850 vs. ExPASy TrEMBL
Match: A5BE96 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_033322 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.2e-16
Identity = 64/213 (30.05%), Postives = 103/213 (48.36%), Query Frame = 0


Query: 3   LMKALTDRYEKPFANSKVYLITRYFNIHMEEDTLVNSYINEINDLMNKLKSIELTFSEEV 62
           LMKAL+  YEKP AN+KV+L+ + FN+ M E+  V  ++NE N + N+L SI++ F +E+
Sbjct: 72  LMKALSGMYEKPSANNKVHLMKKLFNLKMVENASVAQHLNEFNIITNQLSSIKIDFDDEI 131

Query: 63  KAVKLLSSLPDNWKTMKTTVSNLKGSEK--------------------NYASTFGGENSF 122
           +A+ +L+SLP++W+ M+  +SN  G EK                       S FG   + 
Sbjct: 132 RALIVLASLPNSWEAMRMAISNSTGKEKLKYNDIRDLILVEEIHRRDAGETSGFGAALNL 191

Query: 123 ES--------------------------ALVAQSF-------------RKNLLSAGKLDD 157
           E+                           L+   F             R+NL+S G+LDD
Sbjct: 192 ETRRRGDFSKVYLADGSTLDVVGLGDVWILLPNGFVWLLEKVRHIPDLRRNLISVGQLDD 251

[Close]

BLAST of Moc11g14850 vs. ExPASy TrEMBL
Match: A0A438E1E8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2374 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.6e-16
Identity = 64/219 (29.22%), Postives = 102/219 (46.58%), Query Frame = 0


Query: 3   LMKALTDRYEKPFANSKVYLITRYFNIHMEEDTLVNSYINEINDLMNKLKSIELTFSEEV 62
           LMKAL+  YEKP AN+KV+L+ + FN+ M E+  V  ++NE N + N+L S+E+ F +E+
Sbjct: 84  LMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTITNQLSSVEIDFDDEI 143

Query: 63  KAVKLLSSLPDNWKTMKTTVSNLKGSEK------------------NYASTFG------- 122
           +A+ +L+SLP++W+ M+  VSN  G EK                  +   T G       
Sbjct: 144 RALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRRDAGETSGSGSALNL 203

Query: 123 ---GENSFESALV-------------------------------------AQSFRKNLLS 157
              G    + AL+                                         R+NL+S
Sbjct: 204 ETRGREEVQDALLLAVDSPLDDWPLDVVGLGDVRISLPNGSVWLLEKVRHIPDLRRNLIS 263

[Close]

BLAST of Moc11g14850 vs. ExPASy TrEMBL
Match: A5B2M3 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_042933 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.6e-16
Identity = 61/201 (30.35%), Postives = 96/201 (47.76%), Query Frame = 0


Query: 3   LMKALTDRYEKPFANSKVYLITRYFNIHMEEDTLVNSYINEINDLMNKLKSIELTFSEEV 62
           LMKAL+  YEK   N+KV+L+ + FN+ M E+ LV  ++NE N + N+L S+E+ F +E+
Sbjct: 46  LMKALSGXYEKXSXNNKVHLMKKLFNLKMTENALVAQHLNEFNAITNQLSSVEIDFDDEI 105

Query: 63  KAVKLLSSLPDNWKTMKTTVSNLKGSEK--------------------------NYASTF 122
           +A+ +L+SLP++W+ M+  VSN  G EK                           YA   
Sbjct: 106 RALIVLASLPNSWEAMRMAVSNSMGKEKLKYNDIRDLILAEEIPRRDVGETSGSGYALNL 165

Query: 123 ---------------------GGENSFESALVAQSFRKNLLSAGKLDDDGFKSEFAEGSW 157
                                G     E        R+NL+S G+LDD+G    F   +W
Sbjct: 166 ETRGRALDVVGLGDVRISLPNGSVWLLEKVRHIPDLRRNLISVGQLDDEGHAILFVSSTW 225

The following BLAST results are available for this feature:

BLAST of Moc11g14850 vs. NCBI nr


Match Name	E-value	Identity	Description
RVW32946.1	2.8e-18	34.27	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
VFQ62995.1	4.0e-17	36.60	unnamed protein product [Cuscuta campestris]	[more]
CAN81058.1	2.6e-16	30.05	hypothetical protein VITISV_033322 [Vitis vinifera]	[more]
RVW41523.1	3.4e-16	29.22	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
CAN80715.1	3.4e-16	30.35	hypothetical protein VITISV_042933 [Vitis vinifera]	[more]

BLAST of Moc11g14850 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g14850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438DBW3	1.3e-18	34.27	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A0A484KEW5	1.9e-17	36.60	CCHC-type domain-containing protein OS=Cuscuta campestris OX=132261 GN=CCAM_LOCU...	[more]
A5BE96	1.2e-16	30.05	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_033322 PE=4 SV=1	[more]
A0A438E1E8	1.6e-16	29.22	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A5B2M3	1.6e-16	30.35	Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITI...	[more]

BLAST of Moc11g14850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 37..57
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 5..90 e-value: 2.4E-16 score: 59.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 337..357
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 305..357
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 305..336
None	No IPR available	PANTHER	PTHR34676	FAMILY NOT NAMED	coord: 3..91
None	No IPR available	PANTHER	PTHR34676:SF1	ZINC FINGER, CCHC-TYPE, TUBBY C-TERMINAL-LIKE DOMAIN PROTEIN-RELATED	coord: 3..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g14850.1	Moc11g14850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
molecular_function	GO:0140657	ATP-dependent activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0043167	ion binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding