Moc11g14820 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g14820
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Reverse transcriptase Ty1/copia-type domain-containing protein
Location	chr11: 11080042 .. 11080903 (-)
RNA-Seq Expression	Moc11g14820
Synteny	Moc11g14820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAAGAATGAAACTTCTCTTACAATTCAGTCTTTCCATCAATGCTCAAGCTTAATCTCAATAAAGTTGAGTGCAATCAACTATTTACTGTGGAAGTTTCACGTATTACCTCTTGTACGAAGCCTAGGACTTGAACACCATCTTATTAAAGATAGTCCACCAGATTCAGAAACAAAGGATGCTGGAGGAGAAACCGTTGACAATCCCCTACACCACACTTGGCTCAACAATGATGGCTCACTAACCTCGTGGCTTCTAGGAATCATTTATGAGGACGTGTTGGCAATGATAGAGGGATTAAAAACAGCACATCAAGTCTGGAAATCATTGGAAGAAACTCTCCTTGCTATCACAAAGGAAAACGAGATTCATATAAGTGAATCCTTACATTGTTTAAAGCAAGGTAATATGTCCCTTGAATAATATATTAAGAAGTTTAAATCTTTAATTGTGTGACAAATTGGCAGCTGTAAAGAAACCAATTGATGATCTAAGCAAGGTAATTACACTGGCTCGCGAATTGGGGCCAGAATACAAAGAATTCAGAACGACAATGCTATCCAAAGCCCCGTATCCAACCTTCAATCAATTCATTCTTGCACTAATCGCACATGAACAAATGAATCAGGTTGAGGTTGAAGAAGGAAAGCTCTATGTCCCTAATATTAATCAAGCTTTCTATGGTCAACGAGGGAGAAATAGAGGCAGAGGCAAGTCATTCAACTCACGAGGCAGAGGTTTTCAACCAAGCAGAACTTCACAATCTCATAACAATCGGATTGACAACTCATCGAACTCTGTCTTTTTCAACCTACAGAACCTAAAGCAAATCAATCCACAACCCAAGATAACCAAATAA

mRNA sequence

ATGGCTAAGAATGAAACTTCTCTTACAATTCAGTCTTTCCATCAATGCTCAAGCTTAATCTCAATAAAGTTGAGTGCAATCAACTATTTACTGTGGAAGTTTCACGTATTACCTCTTGTACGAAGCCTAGGACTTGAACACCATCTTATTAAAGATAGTCCACCAGATTCAGAAACAAAGGATGCTGGAGGAGAAACCGTTGACAATCCCCTACACCACACTTGGCTCAACAATGATGGCTCACTAACCTCGTGGCTTCTAGGAATCATTTATGAGGACGTGTTGGCAATGATAGAGGGATTAAAAACAGCACATCAAGTCTGGAAATCATTGGAAGAAACTCTCCTTGCTATCACAAAGGAAAACGAGATTCATATAAGTGAATCCTTACATTGTTTAAAGCAAGCTGTAAAGAAACCAATTGATGATCTAAGCAAGGTAATTACACTGGCTCGCGAATTGGGGCCAGAATACAAAGAATTCAGAACGACAATGCTATCCAAAGCCCCGTATCCAACCTTCAATCAATTCATTCTTGCACTAATCGCACATGAACAAATGAATCAGGTTGAGGTTGAAGAAGGAAAGCTCTATGTCCCTAATATTAATCAAGCTTTCTATGGTCAACGAGGGAGAAATAGAGGCAGAGGCAAGTCATTCAACTCACGAGGCAGAGGTTTTCAACCAAGCAGAACTTCACAATCTCATAACAATCGGATTGACAACTCATCGAACTCTGTCTTTTTCAACCTACAGAACCTAAAGCAAATCAATCCACAACCCAAGATAACCAAATAA

Coding sequence (CDS)

ATGGCTAAGAATGAAACTTCTCTTACAATTCAGTCTTTCCATCAATGCTCAAGCTTAATCTCAATAAAGTTGAGTGCAATCAACTATTTACTGTGGAAGTTTCACGTATTACCTCTTGTACGAAGCCTAGGACTTGAACACCATCTTATTAAAGATAGTCCACCAGATTCAGAAACAAAGGATGCTGGAGGAGAAACCGTTGACAATCCCCTACACCACACTTGGCTCAACAATGATGGCTCACTAACCTCGTGGCTTCTAGGAATCATTTATGAGGACGTGTTGGCAATGATAGAGGGATTAAAAACAGCACATCAAGTCTGGAAATCATTGGAAGAAACTCTCCTTGCTATCACAAAGGAAAACGAGATTCATATAAGTGAATCCTTACATTGTTTAAAGCAAGCTGTAAAGAAACCAATTGATGATCTAAGCAAGGTAATTACACTGGCTCGCGAATTGGGGCCAGAATACAAAGAATTCAGAACGACAATGCTATCCAAAGCCCCGTATCCAACCTTCAATCAATTCATTCTTGCACTAATCGCACATGAACAAATGAATCAGGTTGAGGTTGAAGAAGGAAAGCTCTATGTCCCTAATATTAATCAAGCTTTCTATGGTCAACGAGGGAGAAATAGAGGCAGAGGCAAGTCATTCAACTCACGAGGCAGAGGTTTTCAACCAAGCAGAACTTCACAATCTCATAACAATCGGATTGACAACTCATCGAACTCTGTCTTTTTCAACCTACAGAACCTAAAGCAAATCAATCCACAACCCAAGATAACCAAATAA

Protein sequence

MAKNETSLTIQSFHQCSSLISIKLSAINYLLWKFHVLPLVRSLGLEHHLIKDSPPDSETKDAGGETVDNPLHHTWLNNDGSLTSWLLGIIYEDVLAMIEGLKTAHQVWKSLEETLLAITKENEIHISESLHCLKQAVKKPIDDLSKVITLARELGPEYKEFRTTMLSKAPYPTFNQFILALIAHEQMNQVEVEEGKLYVPNINQAFYGQRGRNRGRGKSFNSRGRGFQPSRTSQSHNNRIDNSSNSVFFNLQNLKQINPQPKITK

Homology

[Close]

BLAST of Moc11g14820 vs. NCBI nr
Match: XP_022154021.1 (uncharacterized protein LOC111021379 [Momordica charantia] >XP_022154022.1 uncharacterized protein LOC111021379 [Momordica charantia])

HSP 1 Score: 266.2 bits (679), Expect = 3.1e-67
Identity = 151/286 (52.80%), Postives = 189/286 (66.08%), Query Frame = 0


Query: 1   MAKNETSLTIQSFHQCSSLISIKLSAINYLLWKFHVLPLVRSLGLEHHLIKDSPPDSETK 60
           MA  E  LT+QSFHQCSSLIS+KL++ NYLLWK  VLPL+R+LGLEHHL +++P   E K
Sbjct: 1   MALPENLLTVQSFHQCSSLISLKLNSSNYLLWKSQVLPLIRTLGLEHHLXEEAPVVDECK 60

Query: 61  DAGGETVDNPLHHTWLNNDGSLTSWLLGIIYEDVLAMIEGLKTAHQVWKSLEETLLAITK 120
              GE+       TW+NNDG LTSWLLGII EDVL ++EG +TA +VW SLEE LL +TK
Sbjct: 61  GKEGESAXXTQVRTWINNDGLLTSWLLGIIAEDVLTLLEGTETAKEVWHSLEELLLTMTK 120

Query: 121 ENEIHISESLHCLKQ--------------------AVKKPIDDLSKVITLARELGPEYKE 180
           ENEIH++E+L  LK+                    A+KKP+DDL+KV  LAR LG +YK+
Sbjct: 121 ENEIHLNEALLTLKKGSLSMDEYIRKFKNLCDRLXAMKKPLDDLTKVFHLARGLGIKYKD 180

Query: 181 FRTTMLSKAPYPTFNQFILALIAHEQMNQVEVEEGKLYVPNINQAFYGQRGRNRGRGKSF 240
           FRT MLSKAPYP++NQF+LAL AH+Q    E EE    V N+NQAF+  RGR+RGRG+ F
Sbjct: 181 FRTAMLSKAPYPSYNQFVLALKAHDQFLTDEEEERSSQV-NLNQAFFSNRGRSRGRGRQF 240

Query: 241 NSRGRGFQPSR------------TSQSHNNRIDNSSNSVFFNLQNL 255
           +SRGRGF  S+             SQ  NN   +S+ S  F  + L
Sbjct: 241 SSRGRGFYHSKHPKNQISYKQGIVSQKMNNAHQHSNGSADFKQEKL 285

[Close]

BLAST of Moc11g14820 vs. NCBI nr
Match: RVW43526.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 217.2 bits (552), Expect = 1.7e-52
Identity = 124/273 (45.42%), Postives = 168/273 (61.54%), Query Frame = 0


Query: 1   MAKNETSLTIQSFHQCSSLISIKLSAINYLLWKFHVLPLVRSLGLEHHLIKDSPPDSETK 60
           MA  E  L+IQ+FHQCSSL+SIKL+  N LLW+  VLPLVRSLGL HHL ++     ET 
Sbjct: 46  MANPENVLSIQAFHQCSSLVSIKLNMSNLLLWRSQVLPLVRSLGLIHHLSENRHASKETM 105

Query: 61  DAGGETVDNPLHHTWLNNDGSLTSWLLGIIYEDVLAMIEGLKTAHQVWKSLEETLLAITK 120
               +   +    TW +NDG LTSWLLG++ E+V+ +++G +TA+ VW SL E LL +TK
Sbjct: 106 GTETKETHDQSIETWSHNDGLLTSWLLGLMTEEVMLLLDGTETAYDVWNSLGEKLLPMTK 165

Query: 121 ENEIHISESLHCLKQ--------------------AVKKPIDDLSKVITLARELGPEYKE 180
           E E+ ++  L  +K+                    AV+KP+ DL KV  LA+ LG +Y +
Sbjct: 166 EKEVQLTNRLRGVKKGTRSLDEYLREFKGICDALAAVRKPVSDLDKVFQLAQGLGTKYMD 225

Query: 181 FRTTMLSKAPYPTFNQFILALIAHEQMNQVEVEEGKLYVPNINQAFYGQRGRNRGRGKSF 240
           FR  MLSK PYP++NQF+LAL  HEQM   E EE K  + N  QA++ QRGR R RG  F
Sbjct: 226 FRVAMLSKPPYPSYNQFVLALQGHEQMIMTENEENKESI-NHEQAYFTQRGRGRNRGGRF 285

Query: 241 NSRGRGFQPSRTSQSHNNRIDNSSNSVFFNLQN 254
            SRGRGF P+   + +NN   +   +V+ + +N
Sbjct: 286 LSRGRGFTPA--GRFNNNATSDQRQNVYSSTRN 315

[Close]

BLAST of Moc11g14820 vs. NCBI nr
Match: RVW77775.1 (Retrovirus-related Pol polyprotein from transposon RE2 [Vitis vinifera])

HSP 1 Score: 216.1 bits (549), Expect = 3.7e-52
Identity = 121/257 (47.08%), Postives = 164/257 (63.81%), Query Frame = 0


Query: 1   MAKNETSLTIQSFHQCSSLISIKLSAINYLLWKFHVLPLVRSLGLEHHLIKDSPPDSETK 60
           MA  E  L+IQ+FHQCSSL+SIKL+  N LLW+  VLPLVRSLGL HHL ++     ET 
Sbjct: 1   MANPENVLSIQAFHQCSSLVSIKLNMSNLLLWRSQVLPLVRSLGLIHHLSENRHASEETM 60

Query: 61  DAGGETVDNPLHHTWLNNDGSLTSWLLGIIYEDVLAMIEGLKTAHQVWKSLEETLLAITK 120
               +   +    TW +NDG LTSWLLG++ E+V+ +++G++TA+ VW SL E LL +TK
Sbjct: 61  GTETKETHDQSIETWSHNDGLLTSWLLGLMTEEVMLLLDGIETAYDVWNSLGEKLLPMTK 120

Query: 121 ENEIHISESLHCLKQAVKKPIDDLSKVITLARELGPEYKEFRTTMLSKAPYPTFNQFILA 180
           E E+ ++  L        KP+ DL KV  LA+ LG +Y +FR  MLSK PYP++NQF+LA
Sbjct: 121 EKEVQLTNRLR------GKPVSDLDKVFQLAQGLGTKYMDFRVAMLSKPPYPSYNQFVLA 180

Query: 181 LIAHEQMNQVEVEEGKLYVPNINQAFYGQRGRNRGRGKSFNSRGRGFQPSRTSQSHNNRI 240
           L  HEQM   E EE K  + N  Q+++ QRGR R RG  F SRGRGF P+   + +NN  
Sbjct: 181 LQGHEQMIMTENEENKESI-NHEQSYFTQRGRGRNRGGRFLSRGRGFTPA--GRFNNNAT 240

Query: 241 DNSSNSVFFNLQNLKQI 258
            +   +V  + +N + I
Sbjct: 241 SDQRQNVHSSTRNPRNI 248

[Close]

BLAST of Moc11g14820 vs. NCBI nr
Match: XP_012856951.1 (PREDICTED: uncharacterized protein LOC105976216 [Erythranthe guttata])

HSP 1 Score: 215.3 bits (547), Expect = 6.3e-52
Identity = 121/247 (48.99%), Postives = 153/247 (61.94%), Query Frame = 0


Query: 5   ETSLTIQSFHQCSSLISIKLSAINYLLWKFHVLPLVRSLGLEHHLIKDSPPDSETKDAGG 64
           E  LTIQSFHQ SSLISIKLS  NYL+W+  + PLVRSLG+ HHL  D  P  E KD   
Sbjct: 19  EPQLTIQSFHQYSSLISIKLSTTNYLMWRSQITPLVRSLGVFHHLESDEVPSDEIKDDAE 78

Query: 65  ETVDNPLHHTWLNNDGSLTSWLLGIIYEDVLAMIEGLKTAHQVWKSLEETLLAITKENEI 124
           +   NP++ TW+ NDG L SWL G + E++L+ I   +TA Q+WKSLEE LL IT E E 
Sbjct: 79  KKSPNPVYATWIINDGLLLSWLCGTMNEEMLSSIFDAETARQLWKSLEEQLLPITIEKER 138

Query: 125 HISESLHCLKQ--------------------AVKKPIDDLSKVITLARELGPEYKEFRTT 184
           ++      +K+                    A+KKP+ D  KV   A  LGP+Y+ FR  
Sbjct: 139 NMKNMFMTIKKGSRSLNEYLKEFKWICDNLSAIKKPVSDFDKVFRFANGLGPKYENFRLA 198

Query: 185 MLSKAPYPTFNQFILALIAHEQMNQVEVEEGKLYVPNINQAFYGQRGRNRG-RGKSFNSR 231
           ML+K PYPTF+QF+LAL  HEQ  +   +E K+++ +  QAFYGQR R RG RG  FNSR
Sbjct: 199 MLTKPPYPTFSQFVLALQGHEQSLETLRDEEKIFLEH-EQAFYGQRERGRGSRGGRFNSR 258

[Close]

BLAST of Moc11g14820 vs. NCBI nr
Match: CAN74381.1 (hypothetical protein VITISV_007944 [Vitis vinifera])

HSP 1 Score: 214.9 bits (546), Expect = 8.2e-52
Identity = 123/273 (45.05%), Postives = 167/273 (61.17%), Query Frame = 0


Query: 1   MAKNETSLTIQSFHQCSSLISIKLSAINYLLWKFHVLPLVRSLGLEHHLIKDSPPDSETK 60
           MA  E  L+IQ+FHQCSSL+SIKL+  N LLW+  VLPLVRSLGL HHL ++     ET 
Sbjct: 1   MANPENVLSIQAFHQCSSLVSIKLNMSNLLLWRSQVLPLVRSLGLIHHLSENRHASXETM 60

Query: 61  DAGGETVDNPLHHTWLNNDGSLTSWLLGIIYEDVLAMIEGLKTAHQVWKSLEETLLAITK 120
               +   +    TW +NDG LTSWLLG++ E+V+ +++G +TA+ VW SL E LL +TK
Sbjct: 61  GTETKETHDQSIETWSHNDGLLTSWLLGLMTEEVMLLLDGTETAYDVWNSLGEKLLPMTK 120

Query: 121 ENEIHISESLHCLKQ--------------------AVKKPIDDLSKVITLARELGPEYKE 180
           E E+ ++  L  +K+                    AV+KP+ DL K   LA+ LG +Y +
Sbjct: 121 EKEVQLTNRLRGVKKGTRSLDEYLREFKGICDALAAVRKPVSDLDKXFQLAQGLGTKYMD 180

Query: 181 FRTTMLSKAPYPTFNQFILALIAHEQMNQVEVEEGKLYVPNINQAFYGQRGRNRGRGKSF 240
           FR  MLSK PYP++NQF+LAL  HEQM   E EE K  + N  QA++ QRGR R RG  F
Sbjct: 181 FRVAMLSKPPYPSYNQFVLALQGHEQMIMTENEENKESI-NHEQAYFTQRGRGRNRGGRF 240

Query: 241 NSRGRGFQPSRTSQSHNNRIDNSSNSVFFNLQN 254
            SRGRGF P+   + +NN   +   +V+ + +N
Sbjct: 241 LSRGRGFTPA--GRFNNNATSDQRQNVYSSTRN 270

[Close]

BLAST of Moc11g14820 vs. ExPASy TrEMBL
Match: A0A6J1DMG5 (uncharacterized protein LOC111021379 OS=Momordica charantia OX=3673 GN=LOC111021379 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.5e-67
Identity = 151/286 (52.80%), Postives = 189/286 (66.08%), Query Frame = 0


Query: 1   MAKNETSLTIQSFHQCSSLISIKLSAINYLLWKFHVLPLVRSLGLEHHLIKDSPPDSETK 60
           MA  E  LT+QSFHQCSSLIS+KL++ NYLLWK  VLPL+R+LGLEHHL +++P   E K
Sbjct: 1   MALPENLLTVQSFHQCSSLISLKLNSSNYLLWKSQVLPLIRTLGLEHHLXEEAPVVDECK 60

Query: 61  DAGGETVDNPLHHTWLNNDGSLTSWLLGIIYEDVLAMIEGLKTAHQVWKSLEETLLAITK 120
              GE+       TW+NNDG LTSWLLGII EDVL ++EG +TA +VW SLEE LL +TK
Sbjct: 61  GKEGESAXXTQVRTWINNDGLLTSWLLGIIAEDVLTLLEGTETAKEVWHSLEELLLTMTK 120

Query: 121 ENEIHISESLHCLKQ--------------------AVKKPIDDLSKVITLARELGPEYKE 180
           ENEIH++E+L  LK+                    A+KKP+DDL+KV  LAR LG +YK+
Sbjct: 121 ENEIHLNEALLTLKKGSLSMDEYIRKFKNLCDRLXAMKKPLDDLTKVFHLARGLGIKYKD 180

Query: 181 FRTTMLSKAPYPTFNQFILALIAHEQMNQVEVEEGKLYVPNINQAFYGQRGRNRGRGKSF 240
           FRT MLSKAPYP++NQF+LAL AH+Q    E EE    V N+NQAF+  RGR+RGRG+ F
Sbjct: 181 FRTAMLSKAPYPSYNQFVLALKAHDQFLTDEEEERSSQV-NLNQAFFSNRGRSRGRGRQF 240

Query: 241 NSRGRGFQPSR------------TSQSHNNRIDNSSNSVFFNLQNL 255
           +SRGRGF  S+             SQ  NN   +S+ S  F  + L
Sbjct: 241 SSRGRGFYHSKHPKNQISYKQGIVSQKMNNAHQHSNGSADFKQEKL 285

[Close]

BLAST of Moc11g14820 vs. ExPASy TrEMBL
Match: A0A438E6Z5 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1575 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 8.0e-53
Identity = 124/273 (45.42%), Postives = 168/273 (61.54%), Query Frame = 0


Query: 1   MAKNETSLTIQSFHQCSSLISIKLSAINYLLWKFHVLPLVRSLGLEHHLIKDSPPDSETK 60
           MA  E  L+IQ+FHQCSSL+SIKL+  N LLW+  VLPLVRSLGL HHL ++     ET 
Sbjct: 46  MANPENVLSIQAFHQCSSLVSIKLNMSNLLLWRSQVLPLVRSLGLIHHLSENRHASKETM 105

Query: 61  DAGGETVDNPLHHTWLNNDGSLTSWLLGIIYEDVLAMIEGLKTAHQVWKSLEETLLAITK 120
               +   +    TW +NDG LTSWLLG++ E+V+ +++G +TA+ VW SL E LL +TK
Sbjct: 106 GTETKETHDQSIETWSHNDGLLTSWLLGLMTEEVMLLLDGTETAYDVWNSLGEKLLPMTK 165

Query: 121 ENEIHISESLHCLKQ--------------------AVKKPIDDLSKVITLARELGPEYKE 180
           E E+ ++  L  +K+                    AV+KP+ DL KV  LA+ LG +Y +
Sbjct: 166 EKEVQLTNRLRGVKKGTRSLDEYLREFKGICDALAAVRKPVSDLDKVFQLAQGLGTKYMD 225

Query: 181 FRTTMLSKAPYPTFNQFILALIAHEQMNQVEVEEGKLYVPNINQAFYGQRGRNRGRGKSF 240
           FR  MLSK PYP++NQF+LAL  HEQM   E EE K  + N  QA++ QRGR R RG  F
Sbjct: 226 FRVAMLSKPPYPSYNQFVLALQGHEQMIMTENEENKESI-NHEQAYFTQRGRGRNRGGRF 285

Query: 241 NSRGRGFQPSRTSQSHNNRIDNSSNSVFFNLQN 254
            SRGRGF P+   + +NN   +   +V+ + +N
Sbjct: 286 LSRGRGFTPA--GRFNNNATSDQRQNVYSSTRN 315

[Close]

BLAST of Moc11g14820 vs. ExPASy TrEMBL
Match: A0A438GZV0 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Vitis vinifera OX=29760 GN=RE2_55 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 1.8e-52
Identity = 121/257 (47.08%), Postives = 164/257 (63.81%), Query Frame = 0


Query: 1   MAKNETSLTIQSFHQCSSLISIKLSAINYLLWKFHVLPLVRSLGLEHHLIKDSPPDSETK 60
           MA  E  L+IQ+FHQCSSL+SIKL+  N LLW+  VLPLVRSLGL HHL ++     ET 
Sbjct: 1   MANPENVLSIQAFHQCSSLVSIKLNMSNLLLWRSQVLPLVRSLGLIHHLSENRHASEETM 60

Query: 61  DAGGETVDNPLHHTWLNNDGSLTSWLLGIIYEDVLAMIEGLKTAHQVWKSLEETLLAITK 120
               +   +    TW +NDG LTSWLLG++ E+V+ +++G++TA+ VW SL E LL +TK
Sbjct: 61  GTETKETHDQSIETWSHNDGLLTSWLLGLMTEEVMLLLDGIETAYDVWNSLGEKLLPMTK 120

Query: 121 ENEIHISESLHCLKQAVKKPIDDLSKVITLARELGPEYKEFRTTMLSKAPYPTFNQFILA 180
           E E+ ++  L        KP+ DL KV  LA+ LG +Y +FR  MLSK PYP++NQF+LA
Sbjct: 121 EKEVQLTNRLR------GKPVSDLDKVFQLAQGLGTKYMDFRVAMLSKPPYPSYNQFVLA 180

Query: 181 LIAHEQMNQVEVEEGKLYVPNINQAFYGQRGRNRGRGKSFNSRGRGFQPSRTSQSHNNRI 240
           L  HEQM   E EE K  + N  Q+++ QRGR R RG  F SRGRGF P+   + +NN  
Sbjct: 181 LQGHEQMIMTENEENKESI-NHEQSYFTQRGRGRNRGGRFLSRGRGFTPA--GRFNNNAT 240

Query: 241 DNSSNSVFFNLQNLKQI 258
            +   +V  + +N + I
Sbjct: 241 SDQRQNVHSSTRNPRNI 248

[Close]

BLAST of Moc11g14820 vs. ExPASy TrEMBL
Match: A5BC00 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_007944 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 4.0e-52
Identity = 123/273 (45.05%), Postives = 167/273 (61.17%), Query Frame = 0


Query: 1   MAKNETSLTIQSFHQCSSLISIKLSAINYLLWKFHVLPLVRSLGLEHHLIKDSPPDSETK 60
           MA  E  L+IQ+FHQCSSL+SIKL+  N LLW+  VLPLVRSLGL HHL ++     ET 
Sbjct: 1   MANPENVLSIQAFHQCSSLVSIKLNMSNLLLWRSQVLPLVRSLGLIHHLSENRHASXETM 60

Query: 61  DAGGETVDNPLHHTWLNNDGSLTSWLLGIIYEDVLAMIEGLKTAHQVWKSLEETLLAITK 120
               +   +    TW +NDG LTSWLLG++ E+V+ +++G +TA+ VW SL E LL +TK
Sbjct: 61  GTETKETHDQSIETWSHNDGLLTSWLLGLMTEEVMLLLDGTETAYDVWNSLGEKLLPMTK 120

Query: 121 ENEIHISESLHCLKQ--------------------AVKKPIDDLSKVITLARELGPEYKE 180
           E E+ ++  L  +K+                    AV+KP+ DL K   LA+ LG +Y +
Sbjct: 121 EKEVQLTNRLRGVKKGTRSLDEYLREFKGICDALAAVRKPVSDLDKXFQLAQGLGTKYMD 180

Query: 181 FRTTMLSKAPYPTFNQFILALIAHEQMNQVEVEEGKLYVPNINQAFYGQRGRNRGRGKSF 240
           FR  MLSK PYP++NQF+LAL  HEQM   E EE K  + N  QA++ QRGR R RG  F
Sbjct: 181 FRVAMLSKPPYPSYNQFVLALQGHEQMIMTENEENKESI-NHEQAYFTQRGRGRNRGGRF 240

Query: 241 NSRGRGFQPSRTSQSHNNRIDNSSNSVFFNLQN 254
            SRGRGF P+   + +NN   +   +V+ + +N
Sbjct: 241 LSRGRGFTPA--GRFNNNATSDQRQNVYSSTRN 270

[Close]

BLAST of Moc11g14820 vs. ExPASy TrEMBL
Match: A0A438IAM2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_3180 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 6.8e-52
Identity = 122/273 (44.69%), Postives = 168/273 (61.54%), Query Frame = 0


Query: 1   MAKNETSLTIQSFHQCSSLISIKLSAINYLLWKFHVLPLVRSLGLEHHLIKDSPPDSETK 60
           MA  E  L+IQ+FHQCSSL+SIKL+  N LLW+  VLPLVRSLGL HHL ++     ET 
Sbjct: 1   MANPENVLSIQAFHQCSSLVSIKLNMSNLLLWRSQVLPLVRSLGLIHHLSENRHASEETM 60

Query: 61  DAGGETVDNPLHHTWLNNDGSLTSWLLGIIYEDVLAMIEGLKTAHQVWKSLEETLLAITK 120
               +   +    TW +NDG LTSWLLG++ ++V+ +++G +TA+ VW SL E LL +TK
Sbjct: 61  GTETKETHDQSIETWSHNDGLLTSWLLGLMTKEVMLLLDGTETAYDVWNSLGEKLLPMTK 120

Query: 121 ENEIHISESLHCLKQ--------------------AVKKPIDDLSKVITLARELGPEYKE 180
           E E+ ++  L  +K+                    AV+KP+ DL KV  LA+ LG +Y +
Sbjct: 121 EKEVQLTNRLRGVKKGTRSLDEYLREFKGICDALAAVRKPVSDLDKVFQLAQGLGTKYMD 180

Query: 181 FRTTMLSKAPYPTFNQFILALIAHEQMNQVEVEEGKLYVPNINQAFYGQRGRNRGRGKSF 240
           FR  MLSK PYP++NQF+LAL  HEQM  +E EE K  + N  QA++ QRGR R RG  F
Sbjct: 181 FRVAMLSKPPYPSYNQFVLALQGHEQMIMIENEENKESI-NHEQAYFTQRGRGRNRGGRF 240

Query: 241 NSRGRGFQPSRTSQSHNNRIDNSSNSVFFNLQN 254
            S+GRGF P+   + +NN   +   +V  + +N
Sbjct: 241 LSKGRGFTPA--GRFNNNATSDQRQNVHSSTRN 270

The following BLAST results are available for this feature:

BLAST of Moc11g14820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154021.1	3.1e-67	52.80	uncharacterized protein LOC111021379 [Momordica charantia] >XP_022154022.1 uncha...	[more]
RVW43526.1	1.7e-52	45.42	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
RVW77775.1	3.7e-52	47.08	Retrovirus-related Pol polyprotein from transposon RE2 [Vitis vinifera]	[more]
XP_012856951.1	6.3e-52	48.99	PREDICTED: uncharacterized protein LOC105976216 [Erythranthe guttata]	[more]
CAN74381.1	8.2e-52	45.05	hypothetical protein VITISV_007944 [Vitis vinifera]	[more]

BLAST of Moc11g14820 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g14820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DMG5	1.5e-67	52.80	uncharacterized protein LOC111021379 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A438E6Z5	8.0e-53	45.42	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A0A438GZV0	1.8e-52	47.08	Retrovirus-related Pol polyprotein from transposon RE2 OS=Vitis vinifera OX=2976...	[more]
A5BC00	4.0e-52	45.05	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_007944 PE=4 SV=1	[more]
A0A438IAM2	6.8e-52	44.69	Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976...	[more]

BLAST of Moc11g14820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..244
None	No IPR available	PANTHER	PTHR47481	FAMILY NOT NAMED	coord: 14..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g14820.1	Moc11g14820.1	mRNA