Moc11g14460 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g14460
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ribonuclease H
Location	chr11: 10732440 .. 10740291 (-)
RNA-Seq Expression	Moc11g14460
Synteny	Moc11g14460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCCTGATGAGAGCCATCGGTGCTTCGAAAAGAAGAGCCTGAAAGAAGCGGCCGATCACTTAGATGAGGCAAGACCGAGACCTGATCGTCAAGTTAATCCGACCACCCTTGACGGAAGAGAACTAACGTCGGGCCTGAATAAAGCGACAGACCTCTCGGGAAAGGCAAGGTCGAGCCCTGGTTATCGTCTTAATCCGACCACCCTTGATAGGGGAGAACCAGCGACGGGCCTGAATAAAGCGACAGACCTCTCGGGAAAGGCAAGGCCGAGCCCTGATCATCAACTTAATTCGACCACCCTTGACAGGGGAGAACCGGCTGAGGAGGTAGAATCTGTCCCTCTGATAGCCGAAGATCGACGGGTCAACATCGGAACCAAGTTGGGGAATGAGGAAAGAGAAAGTCTTATAAACTTCCTCAGAAGCAACGCCGATGTGTTCGCATGGTCACTGGAGGACATGCCGGGAATCGATCGAGGAGTTATGGTACATCGACTCAACGTTGACGAGAGCTGTAGAGCTCAGCGAATACGACATTCACTATAAGCCAAGAGCTGCCATGAAAGGGCAGGCTGTGGCAGATTTCATAGCGGAATTAACACCAACAGAACCTCAAGTATATAGTATCGACCCACAAGTGGTTGAGGAAGAGCAACTCTGAACACTCTACGTAGATGGGTCCTCAAATTTTCAAGGATGTGGGTCAGGACTCTTACTAATCTCTCCAGATAAAGAAAGATTCAAATATGCGCTGCGATTCAACTTTCATGCATCCAACAACGAAGCCGAGTATGAAGCTCTACTAGCAGGACTAAAAGTGGTCAGGTACGTTGGGGTCAGGAACATACTGATACTCAGTGATTCACAGCTGATTGTAGGTCAGGTGAGAGAGGAGTTCCAGGCTAGAGAACCGCGAATGGCGAAATACCTTTCACAGGTAAGAAACCAGCTCAAACAGTTCCCAAAATATGAGATTCGACAAATTCCACGTGCTCAAAACGTCAACGCCGATGCGTTAGCTCGACTAGCTGCAGCTTATGAAACCGACCTAGGCAGAACTGTACCGGTCGAGATTTTACCTGGGCCAAGCATAGAAGCTCAGGAAGCCATGGATATCGACGATCAAGGGCAATCAGAAGAAAACTGGAAGATCCCTTTGATCAAATATTTGAGACACGGGATCCTGCCTACTGAAAAGATAGAGGCCCAGCAGCTACAACGACGAGCGGCCAGATATGTGCTTAAAGACGACAATCTGTACAAAAGAGGCTACTCGTTGCCGCTTTTAAAATGTCTAACGCCCGATGAAGCCGACTACGTCATGAGAGAGATACATGAGGGTGTTTGTGGGAGCCATTCTGGAGCACGATCCCTAAGTCACAAAATAGTTCGACAAGGGTACTACTGGCGGACTATGCTGAATGACACGAAGCAATTCACCAAAAAATGCGACAAATGCCAACGATTTGCAACAGTACCTAGACAACCGTCAGAGCCTCTAACAAGCATAATGAGTCCTTGGCCCTTTGCTCAGTGGGGAATAGACCTTATAGGGCTTCTCCCACTAGGAAAGGGCCAGACCAAATTTGCAGTAGTGGCAGTCGATTATTTTACTAAATAGGCCGAAGCCAAGGCCCTAGTGACAATTACTAAGAAAAAGATCACTGACTTCATCTGGAAGAACATAATTTGCCGCTTCGGAATACCCTACACCATTATCAGTGATAATGGGAAGCAGTTCGACAATGCTGCCTTTCGAGAATTTTGCAGGGAGTTGGGCATTAAGCACATCTGTTCCTCGCCAGCACATCCGCAGGCTAATGGGCAAGTTGAAGCAGTCAACAAAATCATCAAAAGAACTCCGAAGACCAGATTAGAAAAGCTCAAAGGGTTGTGGGCAGAGGAACTTCCCAACGCGTTATGGGCCTATAGAACAACACCTTGTACTTCGATAGGAGAAACGCCATTTTCATTATCATTTGGCTCTGAAGCAGTAGTGCCAGTCGAAATTGGACTCCCCTCCCCAAGGGTAGAGCAGTTCAGTCTACTTGACAACAACGAATCCGTAAAGCTCAACCTCGACCTATTAGAAGAACATCGAGAAACAGCACGGCTACGAACGGCTGAATACAAAAATCGAATAGCTCGATACTACAACTCAAAGGTTAAGAAACGTGACTTTAAAGAAGGTGATCTGGTGTTAAGAAAGGTTATGCCCAGTACTAAAGATTCAACTAGCGGTGCGTTCGGGCCGACATGGGACGACCCATACAAAGTCACTAAAGTGGTGCGAATAGGCACTTATGCTTTAGAACACTAACGGGGGAAGGCCTTACTACATCCATGGCACGCCCAACACCTCAAAAGATACTACCACTAGTTCGACATATTTCTCGACATTTCTATGTTTCTCCATTATTTGGACCAACTAAGCTTATTGTAACTAAATCTTCGACAGGACGATCTTCCTGCTAATAAAGTATTCGACATTCGACGTGATACTTGAGTTTTTATGTTCATCCTGAAATAAGTTTCTCAAGCAGGGGGCATCATATGAATATCTACATATCTACGACCTGAATATCTACATATCTACGACCAATAAAGAAACTCAAAACTGGGACGGACTTAGAAGCACGCCGATAAGCTAAAAGCCAAATCAGTGAAACCAGGGAAAATAATCCCGAGGTGCTGAAAAAGGCACGCGTACAGGCCCAGCAAGGTTAAAACAGAAAACATGCAAGCCTAACCGATCAACGAAACCCGCGGGTAGAAAATCATATGGCAAAAGTCAAAATAGATTAAAAACCCGAGGGTGTTGATTTAACTTGGGGTAAAAAACCGGCAGAAGCCAAATATGTTAGAAACCTAAGGGTACCGACTAAACTCAGGGTATAAAAGCCATTGGCAAAAGCCAAGTGGATTAGAAACCCGAGAGTAAACCCTGAGGTATAAAACATGGGCAAAAGCCAAATAGGTTAGAAACCCAAAGGTATCGACATTAGTTCTGTTAAAGTTAGATCCCAAGGCCAAAAGTAAATGGTTTAAACTCAGATGAGAATAAAACCATGCTCAGGAGACTTTATTATGATCAACGAAAATTGGAAAAAACTTCCAATTCATGAATAGTATCGACAAGTTCAACGCACAAAACAGTGGCAGGAACCAAGCACTAAAATCCAAAATGGGATCAAAAGCTTTTGGTAGAAGCCCTGTGCTTAGCAACCTTCTCATTTTTAGCCACTGATATACGATGATCTCGTGGTAACGACAAGCCACAAGTACTCTCAAAACAAAGATCTTTACACAATTATTCGTCTTCTGTTTAGAAAGTGGGGGTCATTATTATGGAGAACAAAAATGACCCGAAACGGGATAAGGAGTTGAAATCTGAGATCATTGATTGGGGGAGACTGGCCCGTGACGTAACGGGCCGGCCCAAAGAGCGACCTAACGCTGGGGCAGAGAACGAGGAAAGCGACTGGCGGAGAACTAATCGGGCCGAGAGGGCTCGGTCCCGACCCCTGCTCGGTCCCGACCCCTGCTCGGTCCCGACCCCTTCTCGGTCCCGACCACTTCTCGGCCAGTCGAGTTTGGTGTGTGCGAGAAGAAGAGCCGGAGGGTCAAAATTCACACATCAACAAATATCTAAGTCAGTTTCAAAATTTTCCAAAATAATTTCTATTGGAATATTTTCTTACAATTTCTCTACATTCCACATTTATCGAGGGTCTTCTTCCCCTTTCCACAACTTGTTTTTTCGACTTATTCATAATCTTCTATGTAGTTCGTTTTTCATGTTTCTCATTGTTTATTTTCTGGTTTTTGTTTTTTAATTTTCCAATTGTCTCAATTTAAATATTCTTGCGAGATTACTTCGACCGTCGTTAACTTTTCCTATGGAAATTAATTAATTTTTTTTGACATTTCTTTTATAGTGGCTTTACAATTTTAGGTGTCTCAAATCTCGACGGCTACAATTTTTTTTTTTTTTGAGACGAACATCTTGGGTATGATCTCATACTATTTTTGTTTTAATGCTTTCCCTCTATATAATCATCCTTTTCATTTTCAAACAACTCTGTAATTTTTAATGTTTTTGTATATCTCATTTTTCTATATACGGAACTTGTATGATATAACAATCAACATGAATAGGCAACTTATGTAAATGCATGATATTATACGTATATACCCATCATAAATGTCATAAAATACATACCTCATTTCGTCCTCATACCTATCCTAATGGTATTTTTATTATATACCACTTATTGCTATACACAAAACCATAGGGTTATGCCAATGAAAATTTAACTTAGGTAAAAAAAGTAGGGCAAATTGTATAAACCATGCCTAAAGTATCATTATTGTTACAATTGCACTCATAAACTTTCAATTATAAAAATTAAACCTTTAAATTTTTAGAAGTGAAATTCACCCCCTAAAATATGATGATTATTACAATTACACCTCCAAACATTTAATTGTAAAATTTTTTATCTTTTATTTTTTTATTTATGAAATTTTAAGAATAATTTTTTAAAATAGAAAGTTGAGGGGTGCCAGTTTTTCATTTCATGAAAGTTCTGTTGGGTGTGTTGCCCTAAACTCGTAGTTTCTATTTATGTAAAAACAAATGTATATTCAATAAAGTTTTATTCAATCAATTTGTTGTTGAATTCATAGCATTGCATTGTCCAAAATCCAATAAACTAAACATCCAAGGTTATTATCATGTAACCAGGACAGTTATCTATTGGGTATATATTTGATATACCCATGATATATTAGGTATATATTTGATATACCCCTGATATACAAGTGAACAATGTTCTGTGAATAACCTAAAGGATCTATAGTATATGGATAAGGCTGGGTACCTTATCCTGACAACACTATGGATACAACCCACTTTGTAAATGTTACAGACGATTCAATACAGGTCGTTCGTGTGGAGACATGCGAATGAGGGTATCATATACAATGAGTTTATATAAGATCGGACCGCGAAATAGTCAATCTTTAGATGTAACACCATTAACTAACAGATTGTTATTTCTTAGGATGACTTGGCAACTCATTCTCAATCCTGAGTGAGTCTGGACTCTTGCCTGTGAGGGCTCGTCCTTTGATCTGTATGGGTGAGAGTGGCCCGAAACGCCGACTTAATATTCGTACCATATTGGGGATGAGACTGAGTAGGGAGCTGGGAACATAACTTCACAAGATGGAATTCACTCATCCCCGACTTTAGGGAATAGACGAGTGTTCTCTTAAATACTAACTCCAGGACTTGAACAAGGGGCCCCACCCTCTCACTGGCCCGAGAGGGACTTCCGGTTATTGGTCAGACCATAACTGGGTTGTTCATTAGAGGAGCAGTTATATTTAAGGAGTAAGATGTAATACAGGGGTAAAACGATAATTTGACCCATCTGTGGTAACGAACACTCGTGAAGGATTAACTTGTCATTAATGGTCGTATATCCGTGGACACGAAAACATTCTGCAGTGAGAGCAGCTGCGGGTCTTTAGTGGAGTGACCCATAGTTAACAAATGTTGATTAACTCGGTCAATGAGTTTGACCGTTTAATCTTGTATCGTTGGAGCTTCTGATCTGTAGGTCGATTAGGTCCCCTTGCTAGCTCATAACGGGTAAAACGAGCATCAAGTTTTTGGAAAATTTGAAATGTTCAAATTGCTCCAGGGATTATATGTATAGTGATACATTATGATATATAGTTAATTCTAATTCAAACTATATATTATGAGAGAAATTATTTAAATGAGATTCAAATAAAATTAATATGAATATGATTCATATTAAAACTATAGGTTAAAAATAATGTGCATAAGTTGTACATTACAACTATATATGATTCTTTTTTCGTAATAAATAATTAAGTGTTAATTATTTATTTGATTTATATATATATATATTAATGGTTAATTAGATTAATAATTAATAATTATTTATTAATTAATAGGATTAATTAATTAATTAATTATATATATATATGTTAATTATTATATATATTAATTAATTACTTATTTATTTATTTATTAATAATATTAATTAATATATAACTCCCCTGCAAAAATGGGGAGTGGGGAGTTAAGCGACGTGGGGTAACTCCCCATGTCACAATTTTTGTTTTTGGTTTATTGTAGAAAAGTTCTGCAAAAACAGTACAACGAAGCCCAAAGAACTCCCGTCATCTCTCTCAAGCTCTCTCTTCTCTATTTTCCATAGATCCATATTGAACGCTCCCACAAGCGTGTTCTAGATATCCAGAGGATAGCACGGAAGGTCTATTGATGAATGAAGATCATCGCTTGCGCTGTGGGATTCACATCCCATCAAATTCGAGGGTTTAATTTTTACAATTGAATGTTGGGGAGTGTAATTGTAACCATCATCATATTTTAGGGGTGCAATTTTTTCACTTATAAAAATTTAAGGATTTAATTTTTACAATTGAAAGTTTGTGGGTAATTGTAACAAGGTTAAAATACTAGTTTGGTCCGGTACTTTTAGGTTTGGTCCATTTTGATCCCTGTACTTTAAAAATGTCCATTTTCGTCCATGTACTCTTTCCTTTTAGTCCTTGTCGTTAAACTACCGTTAATGAACTAACGAATTCATGACGTAACATTTTGAATTAGAGAAATACGTGCCTACATGTCCTCCACCTACCAAATAAACCGTGTCAGTTATGTTATATCAAATCCCCTATTTTAGGTTAAAAATTTGAGTCTGGTCGATATCAAAACTTATCCTTTCTTCCCGTGGCTAGCCTCCTTTCATTTTGTATTTCTGTTTACAATCAAGTTTTTGTTCATTTTGTATTCTATTTACAATCGATTTTTTGAGTTTGGTTTCTTCGGCTTTCATTAAGAGCGTCGTTTGCAAACCTCAATCACATTGGGGCTTTTGTTTGAAATCATTGGCTTTCGAGTCTTATGCAACTGTATCTCTAGTAGGTCATATTTGAGTGTACTAAAATTTATCTTTAATTAATAAAATTAAAGGAAAGTATTTCTCATTCCAAAACCTAGTTCTCTATTTTGAGTTTTTTAGTAGCTATTGGCCACTGGATTTTCTTAATTGCTTTACATAAATATTAAGATGAGTTCTTGGATATAAAAATAGTTTGTAAATGATTCCACTTTTTTAACAATTTTGTTTAACCTCTTTTTCCTTAATTTGTTTAACTTTTGATACTATCAATTCCTAAATTAAGAAATTCACAAGTTTTGTGTCTTTATGGAATGGTAGATTAATCTAAAAATATATGGTTATCAATGTTACTACCTGATTAAGAAAGTTCTTAAATATGAGATGCTCAAAATTACGAAATATCTTGACTAAGTACATTGGTTTTTTACCGGTGATATTAAGGATATTTCCTCAAAGTTTAAAGGAGAGTTGCAATTTAAAGAGTCCCTGGTATTTGTTTTGGAGAAGTTTAGGAAAAGATTTGAGAACAAAGCCACCACCTATTTTCTTTATCGATACTTGGCGATGTATTCATTGTTTTGTTTGTGGTTTTCAATTCATTTTGAAGTGCCCAATTCATGCTACTCAGAAATCAAAGTCATTGTAAAATCTTGTGTGTGGTGGAAGAGAAAATCTCTATTTTCTACAATTCCAATACTCGACTACCCCGATTCTGTCTTAAGCATCATAACCTGTGTGGCAAGAGTCACATCGGTCTTTAGTGCTATTCTGTTTTGCAGGTCTTGTCAATCACTTTTATTCTAGAAAATTGGTGCGAATTTGGCGGAATCCCAAGGGGCCAAATTTCTACATCAACAATTGACGCCATATGTGGGAAAGACTAA

mRNA sequence

ATGAATCCTGATGAGAGCCATCGGTGCTTCGAAAAGAAGAGCCTGAAAGAAGCGGCCGATCACTTAGATGAGGCAAGACCGAGACCTGATCGTCAAGTTAATCCGACCACCCTTGACGGAAGAGAACTAACGTCGGGCCTGAATAAAGCGACAGACCTCTCGGGAAAGGCAAGGTCGAGCCCTGGTTATCGTCTTAATCCGACCACCCTTGATAGGGGAGAACCAGCGACGGGCCTGAATAAAGCGACAGACCTCTCGGGAAAGGCAAGGCCGAGCCCTGATCATCAACTTAATTCGACCACCCTTGACAGGGGAGAACCGGCTGAGGAGGTAGAATCTGTCCCTCTGATAGCCGAAGATCGACGGGTCAACATCGGAACCAAGTTGGGGAATGAGGAAAGAGAAATGGGGGTCATTATTATGGAGAACAAAAATGACCCGAAACGGGATAAGGAGTTGAAATCTGAGATCATTGATTGGGGGAGACTGGCCCGTGACGTAACGGGCCGGCCCAAAGAGCGACCTAACGCTGGGGCAGAGAACGAGGAAAGCGACTGGCGGAGAACTAATCGGGCCGAGAGGGCTCGGTCCCGACCCCTGCTCGGTCCCGACCCCTGCTCGGTCCCGACCCCTTCTCGGTCCCGACCACTTCTCGGCCAGTCGAGTTTGGTCTTGTCAATCACTTTTATTCTAGAAAATTGGTGCGAATTTGGCGGAATCCCAAGGGGCCAAATTTCTACATCAACAATTGACGCCATATGTGGGAAAGACTAA

Coding sequence (CDS)

ATGAATCCTGATGAGAGCCATCGGTGCTTCGAAAAGAAGAGCCTGAAAGAAGCGGCCGATCACTTAGATGAGGCAAGACCGAGACCTGATCGTCAAGTTAATCCGACCACCCTTGACGGAAGAGAACTAACGTCGGGCCTGAATAAAGCGACAGACCTCTCGGGAAAGGCAAGGTCGAGCCCTGGTTATCGTCTTAATCCGACCACCCTTGATAGGGGAGAACCAGCGACGGGCCTGAATAAAGCGACAGACCTCTCGGGAAAGGCAAGGCCGAGCCCTGATCATCAACTTAATTCGACCACCCTTGACAGGGGAGAACCGGCTGAGGAGGTAGAATCTGTCCCTCTGATAGCCGAAGATCGACGGGTCAACATCGGAACCAAGTTGGGGAATGAGGAAAGAGAAATGGGGGTCATTATTATGGAGAACAAAAATGACCCGAAACGGGATAAGGAGTTGAAATCTGAGATCATTGATTGGGGGAGACTGGCCCGTGACGTAACGGGCCGGCCCAAAGAGCGACCTAACGCTGGGGCAGAGAACGAGGAAAGCGACTGGCGGAGAACTAATCGGGCCGAGAGGGCTCGGTCCCGACCCCTGCTCGGTCCCGACCCCTGCTCGGTCCCGACCCCTTCTCGGTCCCGACCACTTCTCGGCCAGTCGAGTTTGGTCTTGTCAATCACTTTTATTCTAGAAAATTGGTGCGAATTTGGCGGAATCCCAAGGGGCCAAATTTCTACATCAACAATTGACGCCATATGTGGGAAAGACTAA

Protein sequence

MNPDESHRCFEKKSLKEAADHLDEARPRPDRQVNPTTLDGRELTSGLNKATDLSGKARSSPGYRLNPTTLDRGEPATGLNKATDLSGKARPSPDHQLNSTTLDRGEPAEEVESVPLIAEDRRVNIGTKLGNEEREMGVIIMENKNDPKRDKELKSEIIDWGRLARDVTGRPKERPNAGAENEESDWRRTNRAERARSRPLLGPDPCSVPTPSRSRPLLGQSSLVLSITFILENWCEFGGIPRGQISTSTIDAICGKD

Homology

[Close]

BLAST of Moc11g14460 vs. NCBI nr
Match: XP_022156571.1 (uncharacterized protein LOC111023448 [Momordica charantia])

HSP 1 Score: 232.3 bits (591), Expect = 4.8e-57
Identity = 118/146 (80.82%), Postives = 127/146 (86.99%), Query Frame = 0


Query: 1   MNPDESHRCFEKKSLKEAADHLDEARPRPDRQVNPTTLDGRELTSGLNKATDLSGKARSS 60
           MNPDESHRCFE+KSLK+AADHLDEARP PDRQ+NPTTLDG E  SGLNKATDLSGKAR S
Sbjct: 1   MNPDESHRCFEEKSLKKAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSGKARPS 60

Query: 61  PGYRLNPTTLDRGEPATGLNKATDLSGKARPSPDHQLNSTTLDRGEPAEEVESVPLIAED 120
           PGYRLNPTTLD+G P  GL KATDLSG ARPSP H+LNSTTLDRGEPAEEVESVPL AED
Sbjct: 61  PGYRLNPTTLDKGGPVAGLIKATDLSGDARPSPGHRLNSTTLDRGEPAEEVESVPLTAED 120

Query: 121 RRVNIGTKLGNEEREMGVIIMENKND 147
           RRVNIGTKLG+EERE  +  + +  D
Sbjct: 121 RRVNIGTKLGSEERESLINFLRSNAD 146

[Close]

BLAST of Moc11g14460 vs. NCBI nr
Match: XP_022156048.1 (uncharacterized protein LOC111023016 [Momordica charantia])

HSP 1 Score: 154.1 bits (388), Expect = 1.7e-33
Identity = 116/329 (35.26%), Postives = 124/329 (37.69%), Query Frame = 0


Query: 73  GEPATGLNKATDLSGKARPSPDHQLNSTTLDRGEPAEEVESVPLIAEDRRVNIGTKLGNE 132
           GEP TGLNKATDLSG+ARPSP H+LNSTTLDRG  AEEVESVPL  E++RVNIGTKLGNE
Sbjct: 33  GEPVTGLNKATDLSGEARPSPGHRLNSTTLDRGGSAEEVESVPLTVEEQRVNIGTKLGNE 92

Query: 133 ERE--------------------------------------------------------- 192
           ERE                                                         
Sbjct: 93  ERESLINFLRSNADVFAWSPEDMPRIDRGVMVHRLNVDESCKPVKQKRRAFNQERNEIVA 152

Query: 193 ------------------------------------------------------------ 206
                                                                       
Sbjct: 153 EHVNELLKTGFIREVHYPQWISNVVLVKKPNGKWRMCIDFTDLNKVCPKDYFPLPRIDQL 212

[Close]

BLAST of Moc11g14460 vs. NCBI nr
Match: XP_022158042.1 (uncharacterized protein LOC111024621 [Momordica charantia])

HSP 1 Score: 88.2 bits (217), Expect = 1.1e-13
Identity = 56/145 (38.62%), Postives = 76/145 (52.41%), Query Frame = 0


Query: 2   NPDESHRCFEKKSLKEAADHLDEARPRPDRQVNPTTLDGRELTSGLNKATDLSGKARSSP 61
           NP E  +CFE++SL+ AA+ L E  P PD Q NPTT D  E   G+              
Sbjct: 7   NP-EGQQCFEEESLEVAANGLGEICPSPDHQPNPTTFDKGEPVGGVESI----------- 66

Query: 62  GYRLNPTTLDRGEPATGLNKATDLSGKARPSPDHQLNSTTLDRGEPAEEVESVPLIAEDR 121
                        P T  ++A D  G+   SPD   + T  DRGEP +EVES+PL ++DR
Sbjct: 67  -------------PLTPGDRAVDGLGEICSSPDQLPSPTIFDRGEPTKEVESIPLTSDDR 126

Query: 122 RVNIGTKLGNEEREMGVIIMENKND 147
           RVNIGT+LGN++R   +  + +  D
Sbjct: 127 RVNIGTRLGNKKRASLISFLRSNTD 126

[Close]

BLAST of Moc11g14460 vs. ExPASy TrEMBL
Match: A0A6J1DVC6 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111023448 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 2.3e-57
Identity = 118/146 (80.82%), Postives = 127/146 (86.99%), Query Frame = 0


Query: 1   MNPDESHRCFEKKSLKEAADHLDEARPRPDRQVNPTTLDGRELTSGLNKATDLSGKARSS 60
           MNPDESHRCFE+KSLK+AADHLDEARP PDRQ+NPTTLDG E  SGLNKATDLSGKAR S
Sbjct: 1   MNPDESHRCFEEKSLKKAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSGKARPS 60

Query: 61  PGYRLNPTTLDRGEPATGLNKATDLSGKARPSPDHQLNSTTLDRGEPAEEVESVPLIAED 120
           PGYRLNPTTLD+G P  GL KATDLSG ARPSP H+LNSTTLDRGEPAEEVESVPL AED
Sbjct: 61  PGYRLNPTTLDKGGPVAGLIKATDLSGDARPSPGHRLNSTTLDRGEPAEEVESVPLTAED 120

Query: 121 RRVNIGTKLGNEEREMGVIIMENKND 147
           RRVNIGTKLG+EERE  +  + +  D
Sbjct: 121 RRVNIGTKLGSEERESLINFLRSNAD 146

[Close]

BLAST of Moc11g14460 vs. ExPASy TrEMBL
Match: A0A6J1DPJ5 (uncharacterized protein LOC111023016 OS=Momordica charantia OX=3673 GN=LOC111023016 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 8.1e-34
Identity = 116/329 (35.26%), Postives = 124/329 (37.69%), Query Frame = 0


Query: 73  GEPATGLNKATDLSGKARPSPDHQLNSTTLDRGEPAEEVESVPLIAEDRRVNIGTKLGNE 132
           GEP TGLNKATDLSG+ARPSP H+LNSTTLDRG  AEEVESVPL  E++RVNIGTKLGNE
Sbjct: 33  GEPVTGLNKATDLSGEARPSPGHRLNSTTLDRGGSAEEVESVPLTVEEQRVNIGTKLGNE 92

Query: 133 ERE--------------------------------------------------------- 192
           ERE                                                         
Sbjct: 93  ERESLINFLRSNADVFAWSPEDMPRIDRGVMVHRLNVDESCKPVKQKRRAFNQERNEIVA 152

Query: 193 ------------------------------------------------------------ 206
                                                                       
Sbjct: 153 EHVNELLKTGFIREVHYPQWISNVVLVKKPNGKWRMCIDFTDLNKVCPKDYFPLPRIDQL 212

[Close]

BLAST of Moc11g14460 vs. ExPASy TrEMBL
Match: A0A6J1DW49 (uncharacterized protein LOC111024621 OS=Momordica charantia OX=3673 GN=LOC111024621 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 5.5e-14
Identity = 56/145 (38.62%), Postives = 76/145 (52.41%), Query Frame = 0


Query: 2   NPDESHRCFEKKSLKEAADHLDEARPRPDRQVNPTTLDGRELTSGLNKATDLSGKARSSP 61
           NP E  +CFE++SL+ AA+ L E  P PD Q NPTT D  E   G+              
Sbjct: 7   NP-EGQQCFEEESLEVAANGLGEICPSPDHQPNPTTFDKGEPVGGVESI----------- 66

Query: 62  GYRLNPTTLDRGEPATGLNKATDLSGKARPSPDHQLNSTTLDRGEPAEEVESVPLIAEDR 121
                        P T  ++A D  G+   SPD   + T  DRGEP +EVES+PL ++DR
Sbjct: 67  -------------PLTPGDRAVDGLGEICSSPDQLPSPTIFDRGEPTKEVESIPLTSDDR 126

Query: 122 RVNIGTKLGNEEREMGVIIMENKND 147
           RVNIGT+LGN++R   +  + +  D
Sbjct: 127 RVNIGTRLGNKKRASLISFLRSNTD 126

The following BLAST results are available for this feature:

BLAST of Moc11g14460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156571.1	4.8e-57	80.82	uncharacterized protein LOC111023448 [Momordica charantia]	[more]
XP_022156048.1	1.7e-33	35.26	uncharacterized protein LOC111023016 [Momordica charantia]	[more]
XP_022158042.1	1.1e-13	38.62	uncharacterized protein LOC111024621 [Momordica charantia]	[more]

BLAST of Moc11g14460 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g14460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DVC6	2.3e-57	80.82	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111023448 PE=4 SV=1	[more]
A0A6J1DPJ5	8.1e-34	35.26	uncharacterized protein LOC111023016 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DW49	5.5e-14	38.62	uncharacterized protein LOC111024621 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]

BLAST of Moc11g14460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g14460.1	Moc11g14460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity