Moc11g14210 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g14210
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	CCHC-type domain-containing protein
Location	chr11: 10556095 .. 10556754 (-)
RNA-Seq Expression	Moc11g14210
Synteny	Moc11g14210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATGAAGGCTATCTTGAGAAAAGATAATTGCCTTGCAGCCATCAGTGCGAGGCCCGCGAATGTCACAGATGATAAGTGGAACGAGATGGATGGGAATGCTGTTGCAAATCTTCATCTGGCTCTAGCAGATAAAGTGTTGTCAAGCATAGAGGAGAAGAAAACTGCTAAGGAGATTTGGGATCATTTCGAAATGTTGTACGTGGCCAGGTCACTTCACAACAATATTTTCCTTAAGAGGAGATTGTATACTCTTCGAATGTCAGAATCTACTCCAATGACAGAGCACATCAACACGTTGAATACTCTATTTTCTCAACTAACATCATTGGGTTGTAAAATAGAGCCAAATGAACGTGCTGAACTTCTACTTCAAAGTCTTCCTGATTCGTATGATCAACTTGTCATCAACCTGACAAATAATGTTCTCACCGACTATCTAAACTTTGAAGATATTGGAGCTGTTATCCTGGAAGAGGAAAATCGACGCAAGAACAAAGTAGATAAGTTGGTGAGTTCACAACAAACAGAGGCTCTAGCGGTGACAAGAGGTAGATCAATGGAACGTGGCTCAAGTGGGAGCCAAAATCAAGGAAGGGCAAAATCTAGAAGTAAGAAGAACATGAATGCTACCACTGTGGCAAGAAGGGACATTTGA

mRNA sequence

ATGAAGATGAAGGCTATCTTGAGAAAAGATAATTGCCTTGCAGCCATCAGTGCGAGGCCCGCGAATGTCACAGATGATAAGTGGAACGAGATGGATGGGAATGCTGTTGCAAATCTTCATCTGGCTCTAGCAGATAAAGTGTTGTCAAGCATAGAGGAGAAGAAAACTGCTAAGGAGATTTGGGATCATTTCGAAATGTTGTACGTGGCCAGGTCACTTCACAACAATATTTTCCTTAAGAGGAGATTGTATACTCTTCGAATGTCAGAATCTACTCCAATGACAGAGCACATCAACACGTTGAATACTCTATTTTCTCAACTAACATCATTGGGTTGTAAAATAGAGCCAAATGAACGTGCTGAACTTCTACTTCAAAGTCTTCCTGATTCGTATGATCAACTTGTCATCAACCTGACAAATAATGTTCTCACCGACTATCTAAACTTTGAAGATATTGGAGCTGTTATCCTGGAAGAGGAAAATCGACGCAAGAACAAAGTAGATAAGTTGGTGAGTTCACAACAAACAGAGGCTCTAGCGGTGACAAGAGGTAGATCAATGGAACGTGGCTCAAGTGGGAGCCAAAATCAAGGAAGGGCAAAATCTAGAAGTAAGAAGAACATGAATGCTACCACTGTGGCAAGAAGGGACATTTGA

Coding sequence (CDS)

ATGAAGATGAAGGCTATCTTGAGAAAAGATAATTGCCTTGCAGCCATCAGTGCGAGGCCCGCGAATGTCACAGATGATAAGTGGAACGAGATGGATGGGAATGCTGTTGCAAATCTTCATCTGGCTCTAGCAGATAAAGTGTTGTCAAGCATAGAGGAGAAGAAAACTGCTAAGGAGATTTGGGATCATTTCGAAATGTTGTACGTGGCCAGGTCACTTCACAACAATATTTTCCTTAAGAGGAGATTGTATACTCTTCGAATGTCAGAATCTACTCCAATGACAGAGCACATCAACACGTTGAATACTCTATTTTCTCAACTAACATCATTGGGTTGTAAAATAGAGCCAAATGAACGTGCTGAACTTCTACTTCAAAGTCTTCCTGATTCGTATGATCAACTTGTCATCAACCTGACAAATAATGTTCTCACCGACTATCTAAACTTTGAAGATATTGGAGCTGTTATCCTGGAAGAGGAAAATCGACGCAAGAACAAAGTAGATAAGTTGGTGAGTTCACAACAAACAGAGGCTCTAGCGGTGACAAGAGGTAGATCAATGGAACGTGGCTCAAGTGGGAGCCAAAATCAAGGAAGGGCAAAATCTAGAAGTAAGAAGAACATGAATGCTACCACTGTGGCAAGAAGGGACATTTGA

Protein sequence

MKMKAILRKDNCLAAISARPANVTDDKWNEMDGNAVANLHLALADKVLSSIEEKKTAKEIWDHFEMLYVARSLHNNIFLKRRLYTLRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNERAELLLQSLPDSYDQLVINLTNNVLTDYLNFEDIGAVILEEENRRKNKVDKLVSSQQTEALAVTRGRSMERGSSGSQNQGRAKSRSKKNMNATTVARRDI

Homology

[Close]

BLAST of Moc11g14210 vs. NCBI nr
Match: KAA0061179.1 (Gag-Pol [Cucumis melo var. makuwa] >TYK06231.1 Gag-Pol [Cucumis melo var. makuwa])

HSP 1 Score: 310.8 bits (795), Expect = 9.1e-81
Identity = 161/205 (78.54%), Postives = 177/205 (86.34%), Query Frame = 0


Query: 1   MKMKAILRKDNCLAAISARPANVTDD-KWNEMDGNAVANLHLALADKVLSSIEEKKTAKE 60
           +KMK +LRKDNCL  +  RPA + DD KWNEMDGNA AN+HLALAD VLSSIEEKKTAKE
Sbjct: 20  LKMKVVLRKDNCLEVVDKRPAEIIDDSKWNEMDGNATANIHLALADNVLSSIEEKKTAKE 79

Query: 61  IWDHFEMLYVARSLHNNIFLKRRLYTLRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNE 120
           IWDH   LY A+SLHN IFLKR+LYTLRMSEST MTEH+N LNTLFSQLT L  KIEPNE
Sbjct: 80  IWDHLTKLYKAKSLHNKIFLKRKLYTLRMSESTSMTEHMNILNTLFSQLTLLAYKIEPNE 139

Query: 121 RAELLLQSLPDSYDQLVINLTNNVLTDYLNFEDIGAVILEEENRRKNKVDKLVSSQQTEA 180
           RAELLLQSLPDSYDQLVINLTNN+LTDYL+F+D+ + +LEEENRRKNK DKLVSSQQ EA
Sbjct: 140 RAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVTSAVLEEENRRKNKEDKLVSSQQAEA 199

Query: 181 LAVTRGRSMERGSSGSQNQGRAKSR 205
           L VTRGRS E  SSGS+NQGR+KSR
Sbjct: 200 LVVTRGRSSECNSSGSKNQGRSKSR 224

[Close]

BLAST of Moc11g14210 vs. NCBI nr
Match: TYK16527.1 (hypothetical protein E5676_scaffold21G003420 [Cucumis melo var. makuwa])

HSP 1 Score: 306.6 bits (784), Expect = 1.7e-79
Identity = 164/218 (75.23%), Postives = 183/218 (83.94%), Query Frame = 0


Query: 1   MKMKAILRKDNCLAAISARPANVTDD-KWNEMDGNAVANLHLALADKVLSSIEEKKTAKE 60
           +KMKAI RKDNCL AI  RPA +TDD KWNEMDGNA+AN+HLALAD VLSSIEEKK AKE
Sbjct: 20  LKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALADNVLSSIEEKKIAKE 79

Query: 61  IWDHFEMLYVARSLHNNIFLKRRLYTLRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNE 120
           IWDH   LY A+SLHN IFLKR+LYTLRMS ST MTEH+NTLNTLFSQLT LG KIEPN+
Sbjct: 80  IWDHLIKLYEAKSLHNKIFLKRKLYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNK 139

Query: 121 RAELLLQSLPDSYDQLVINLTNNVLTDYLNFEDIGAVILEEENRRKNKVDKLVSSQQTEA 180
            AELLLQSLPDSYDQLVINLTNN+LTDYL+F+D+ A +LEEENR KNK DKLVSSQQ E 
Sbjct: 140 CAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVVATVLEEENRCKNKEDKLVSSQQAEV 199

Query: 181 LAVTRGRSMERGSSGSQNQGRAKSRSKKNMNATTVARR 218
           L VTR R +E  SSGS+NQGR+KS+SKKNM      ++
Sbjct: 200 LTVTRVRPLECNSSGSKNQGRSKSQSKKNMKCYNCGKK 237

[Close]

BLAST of Moc11g14210 vs. NCBI nr
Match: KAA0044949.1 (hypothetical protein E6C27_scaffold74G002510 [Cucumis melo var. makuwa])

HSP 1 Score: 306.6 bits (784), Expect = 1.7e-79
Identity = 163/218 (74.77%), Postives = 182/218 (83.49%), Query Frame = 0


Query: 1   MKMKAILRKDNCLAAISARPANVTDD-KWNEMDGNAVANLHLALADKVLSSIEEKKTAKE 60
           +KMKAI RKDNCL AI  RPA +TDD KWNEMDGNA+AN+HLAL D VLSSIEEKK AKE
Sbjct: 20  LKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKE 79

Query: 61  IWDHFEMLYVARSLHNNIFLKRRLYTLRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNE 120
           IWDH   LY A+SLHN IFLKR+LYTLRMS ST MTEH+NTLNTLFSQLT LG KIEPN+
Sbjct: 80  IWDHLIKLYEAKSLHNKIFLKRKLYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNK 139

Query: 121 RAELLLQSLPDSYDQLVINLTNNVLTDYLNFEDIGAVILEEENRRKNKVDKLVSSQQTEA 180
            AELLLQSLPDSYDQLVINLTNN+LTDYL+F+D+ A +LEEENR KNK DKLVSSQQ EA
Sbjct: 140 HAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEA 199

Query: 181 LAVTRGRSMERGSSGSQNQGRAKSRSKKNMNATTVARR 218
           L VTR R +E  SSGS+NQGR+KS+SKK M      ++
Sbjct: 200 LTVTRVRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKK 237

[Close]

BLAST of Moc11g14210 vs. NCBI nr
Match: KAF2314531.1 (hypothetical protein GH714_027382 [Hevea brasiliensis])

HSP 1 Score: 300.4 bits (768), Expect = 1.2e-77
Identity = 157/217 (72.35%), Postives = 178/217 (82.03%), Query Frame = 0


Query: 1   MKMKAILRKDNCLAAISARPANVTDDKWNEMDGNAVANLHLALADKVLSSIEEKKTAKEI 60
           +K++AILRKDNCLAAI  RP  +TDD+W EMD NA+ANLHLA+AD VLSS+ EKKTAKEI
Sbjct: 79  LKIRAILRKDNCLAAIEDRPTGITDDRWKEMDDNAIANLHLAMADTVLSSVAEKKTAKEI 138

Query: 61  WDHFEMLYVARSLHNNIFLKRRLYTLRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNER 120
           WD    LY A+SLHN IFLKRRLYTLRMSEST +T+HIN LNTLFSQLT+L   I  NER
Sbjct: 139 WDTLTGLYEAKSLHNKIFLKRRLYTLRMSESTSVTDHINNLNTLFSQLTALEYHIAENER 198

Query: 121 AELLLQSLPDSYDQLVINLTNNVLTDYLNFEDIGAVILEEENRRKNKVDKLVSSQQTEAL 180
           AELLLQSLPDSYDQL+INLTNN+LTDYL F D+ A +LEEE+RRKNK DKL +SQQTEAL
Sbjct: 199 AELLLQSLPDSYDQLIINLTNNILTDYLVFNDVAAAVLEEESRRKNKEDKLFTSQQTEAL 258

Query: 181 AVTRGRSMERGSSGSQNQGRAKSRSKKNMNATTVARR 218
            + RGRSME GSSGSQN  R+KSRSKKN       +R
Sbjct: 259 LMMRGRSMEHGSSGSQNHSRSKSRSKKNFKCYHCGKR 295

[Close]

BLAST of Moc11g14210 vs. NCBI nr
Match: KAF2291279.1 (hypothetical protein GH714_022155 [Hevea brasiliensis] >KAF2291288.1 hypothetical protein GH714_022225 [Hevea brasiliensis])

HSP 1 Score: 296.2 bits (757), Expect = 2.3e-76
Identity = 155/217 (71.43%), Postives = 176/217 (81.11%), Query Frame = 0


Query: 1   MKMKAILRKDNCLAAISARPANVTDDKWNEMDGNAVANLHLALADKVLSSIEEKKTAKEI 60
           +KM+AILRKDNCLAAI  RP  +TDD+W EMD NA+A+LHLA+AD VLSS+ EKKTAKEI
Sbjct: 57  LKMRAILRKDNCLAAIEDRPIGITDDRWKEMDDNAIAHLHLAMADTVLSSVAEKKTAKEI 116

Query: 61  WDHFEMLYVARSLHNNIFLKRRLYTLRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNER 120
           WD    LY A+SLHN IFLKRRLYT RMSEST +T+HIN LNTLFSQLT+L   I  NER
Sbjct: 117 WDTLTGLYEAKSLHNKIFLKRRLYTFRMSESTSVTDHINNLNTLFSQLTALEYHIAENER 176

Query: 121 AELLLQSLPDSYDQLVINLTNNVLTDYLNFEDIGAVILEEENRRKNKVDKLVSSQQTEAL 180
            ELLLQSLPDSYDQL+INLTNN+LTDYL F D+ A +LEEE+RRKNK DKL +SQQTEAL
Sbjct: 177 TELLLQSLPDSYDQLIINLTNNILTDYLVFNDVAAAVLEEESRRKNKEDKLFTSQQTEAL 236

Query: 181 AVTRGRSMERGSSGSQNQGRAKSRSKKNMNATTVARR 218
            + RGRSM RGSSGSQN  R+KSRSKKN       +R
Sbjct: 237 LMMRGRSMARGSSGSQNHSRSKSRSKKNFKCYHCGKR 273

[Close]

BLAST of Moc11g14210 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.8e-24
Identity = 69/196 (35.20%), Postives = 112/196 (57.14%), Query Frame = 0


Query: 17  SARPANVTDDKWNEMDGNAVANLHLALADKVLSSIEEKKTAKEIWDHFEMLYVARSLHNN 76
           S +P  +  + W ++D  A + + L L+D V+++I ++ TA+ IW   E LY++++L N 
Sbjct: 41  SKKPDTMKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNK 100

Query: 77  IFLKRRLYTLRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNERAELLLQSLPDSYDQLV 136
           ++LK++LY L MSE T    H+N  N L +QL +LG KIE  ++A LLL SLP SYD L 
Sbjct: 101 LYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLA 160

Query: 137 INLTNNVLTDYLNFEDIGAVILEEENRRKNKVDKLVSSQQTEALAVTRGRSMERGSSG-- 196
             + +   T  +  +D+ + +L  E  RK        +Q    +   RGRS +R S+   
Sbjct: 161 TTILHGKTT--IELKDVTSALLLNEKMRKKP-----ENQGQALITEGRGRSYQRSSNNYG 220

Query: 197 -SQNQGRAKSRSKKNM 210
            S  +G++K+RSK  +
Sbjct: 221 RSGARGKSKNRSKSRV 229

[Close]

BLAST of Moc11g14210 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 70.1 bits (170), Expect = 3.5e-11
Identity = 42/165 (25.45%), Postives = 85/165 (51.52%), Query Frame = 0


Query: 2   KMKAILRKDNCLAAISARPANVTDDKWNEMDGNAVANLHLALADKVLSSIEEKKTAKEIW 61
           +++A+L + + L  +     N  DD W + +  A + +   L+D  L+      TA++I 
Sbjct: 22  RIRALLAEQDVLKVVDGLMPNEVDDSWKKAERCAKSTIIEYLSDSFLNFATSDITARQIL 81

Query: 62  DHFEMLYVARSLHNNIFLKRRLYTLRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNERA 121
           ++ + +Y  +SL + + L++RL +L++S    +  H +  + L S+L + G KIE  ++ 
Sbjct: 82  ENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSHFHIFDELISELLAAGAKIEEMDKI 141

Query: 122 ELLLQSLPDSYDQLVINLTNNVLTDYLNFEDIGAVILEEENRRKN 167
             LL +LP  YD  +I     +  + L    +   +L++E + KN
Sbjct: 142 SHLLITLPSCYDG-IITAIETLSEENLTLAFVKNRLLDQEIKIKN 185

[Close]

BLAST of Moc11g14210 vs. ExPASy TrEMBL
Match: A0A5A7V644 (Gag-Pol OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00020 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 4.4e-81
Identity = 161/205 (78.54%), Postives = 177/205 (86.34%), Query Frame = 0


Query: 1   MKMKAILRKDNCLAAISARPANVTDD-KWNEMDGNAVANLHLALADKVLSSIEEKKTAKE 60
           +KMK +LRKDNCL  +  RPA + DD KWNEMDGNA AN+HLALAD VLSSIEEKKTAKE
Sbjct: 20  LKMKVVLRKDNCLEVVDKRPAEIIDDSKWNEMDGNATANIHLALADNVLSSIEEKKTAKE 79

Query: 61  IWDHFEMLYVARSLHNNIFLKRRLYTLRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNE 120
           IWDH   LY A+SLHN IFLKR+LYTLRMSEST MTEH+N LNTLFSQLT L  KIEPNE
Sbjct: 80  IWDHLTKLYKAKSLHNKIFLKRKLYTLRMSESTSMTEHMNILNTLFSQLTLLAYKIEPNE 139

Query: 121 RAELLLQSLPDSYDQLVINLTNNVLTDYLNFEDIGAVILEEENRRKNKVDKLVSSQQTEA 180
           RAELLLQSLPDSYDQLVINLTNN+LTDYL+F+D+ + +LEEENRRKNK DKLVSSQQ EA
Sbjct: 140 RAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVTSAVLEEENRRKNKEDKLVSSQQAEA 199

Query: 181 LAVTRGRSMERGSSGSQNQGRAKSR 205
           L VTRGRS E  SSGS+NQGR+KSR
Sbjct: 200 LVVTRGRSSECNSSGSKNQGRSKSR 224

[Close]

BLAST of Moc11g14210 vs. ExPASy TrEMBL
Match: A0A5D3CXA6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003420 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 8.3e-80
Identity = 164/218 (75.23%), Postives = 183/218 (83.94%), Query Frame = 0


Query: 1   MKMKAILRKDNCLAAISARPANVTDD-KWNEMDGNAVANLHLALADKVLSSIEEKKTAKE 60
           +KMKAI RKDNCL AI  RPA +TDD KWNEMDGNA+AN+HLALAD VLSSIEEKK AKE
Sbjct: 20  LKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALADNVLSSIEEKKIAKE 79

Query: 61  IWDHFEMLYVARSLHNNIFLKRRLYTLRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNE 120
           IWDH   LY A+SLHN IFLKR+LYTLRMS ST MTEH+NTLNTLFSQLT LG KIEPN+
Sbjct: 80  IWDHLIKLYEAKSLHNKIFLKRKLYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNK 139

Query: 121 RAELLLQSLPDSYDQLVINLTNNVLTDYLNFEDIGAVILEEENRRKNKVDKLVSSQQTEA 180
            AELLLQSLPDSYDQLVINLTNN+LTDYL+F+D+ A +LEEENR KNK DKLVSSQQ E 
Sbjct: 140 CAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVVATVLEEENRCKNKEDKLVSSQQAEV 199

Query: 181 LAVTRGRSMERGSSGSQNQGRAKSRSKKNMNATTVARR 218
           L VTR R +E  SSGS+NQGR+KS+SKKNM      ++
Sbjct: 200 LTVTRVRPLECNSSGSKNQGRSKSQSKKNMKCYNCGKK 237

[Close]

BLAST of Moc11g14210 vs. ExPASy TrEMBL
Match: A0A5A7TUN0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002510 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 8.3e-80
Identity = 163/218 (74.77%), Postives = 182/218 (83.49%), Query Frame = 0


Query: 1   MKMKAILRKDNCLAAISARPANVTDD-KWNEMDGNAVANLHLALADKVLSSIEEKKTAKE 60
           +KMKAI RKDNCL AI  RPA +TDD KWNEMDGNA+AN+HLAL D VLSSIEEKK AKE
Sbjct: 20  LKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKE 79

Query: 61  IWDHFEMLYVARSLHNNIFLKRRLYTLRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNE 120
           IWDH   LY A+SLHN IFLKR+LYTLRMS ST MTEH+NTLNTLFSQLT LG KIEPN+
Sbjct: 80  IWDHLIKLYEAKSLHNKIFLKRKLYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNK 139

Query: 121 RAELLLQSLPDSYDQLVINLTNNVLTDYLNFEDIGAVILEEENRRKNKVDKLVSSQQTEA 180
            AELLLQSLPDSYDQLVINLTNN+LTDYL+F+D+ A +LEEENR KNK DKLVSSQQ EA
Sbjct: 140 HAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEA 199

Query: 181 LAVTRGRSMERGSSGSQNQGRAKSRSKKNMNATTVARR 218
           L VTR R +E  SSGS+NQGR+KS+SKK M      ++
Sbjct: 200 LTVTRVRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKK 237

[Close]

BLAST of Moc11g14210 vs. ExPASy TrEMBL
Match: A0A6A6MLA0 (CCHC-type domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_027382 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 6.0e-78
Identity = 157/217 (72.35%), Postives = 178/217 (82.03%), Query Frame = 0


Query: 1   MKMKAILRKDNCLAAISARPANVTDDKWNEMDGNAVANLHLALADKVLSSIEEKKTAKEI 60
           +K++AILRKDNCLAAI  RP  +TDD+W EMD NA+ANLHLA+AD VLSS+ EKKTAKEI
Sbjct: 79  LKIRAILRKDNCLAAIEDRPTGITDDRWKEMDDNAIANLHLAMADTVLSSVAEKKTAKEI 138

Query: 61  WDHFEMLYVARSLHNNIFLKRRLYTLRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNER 120
           WD    LY A+SLHN IFLKRRLYTLRMSEST +T+HIN LNTLFSQLT+L   I  NER
Sbjct: 139 WDTLTGLYEAKSLHNKIFLKRRLYTLRMSESTSVTDHINNLNTLFSQLTALEYHIAENER 198

Query: 121 AELLLQSLPDSYDQLVINLTNNVLTDYLNFEDIGAVILEEENRRKNKVDKLVSSQQTEAL 180
           AELLLQSLPDSYDQL+INLTNN+LTDYL F D+ A +LEEE+RRKNK DKL +SQQTEAL
Sbjct: 199 AELLLQSLPDSYDQLIINLTNNILTDYLVFNDVAAAVLEEESRRKNKEDKLFTSQQTEAL 258

Query: 181 AVTRGRSMERGSSGSQNQGRAKSRSKKNMNATTVARR 218
            + RGRSME GSSGSQN  R+KSRSKKN       +R
Sbjct: 259 LMMRGRSMEHGSSGSQNHSRSKSRSKKNFKCYHCGKR 295

[Close]

BLAST of Moc11g14210 vs. ExPASy TrEMBL
Match: A0A6A6KV10 (CCHC-type domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_022155 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 1.1e-76
Identity = 155/217 (71.43%), Postives = 176/217 (81.11%), Query Frame = 0


Query: 1   MKMKAILRKDNCLAAISARPANVTDDKWNEMDGNAVANLHLALADKVLSSIEEKKTAKEI 60
           +KM+AILRKDNCLAAI  RP  +TDD+W EMD NA+A+LHLA+AD VLSS+ EKKTAKEI
Sbjct: 57  LKMRAILRKDNCLAAIEDRPIGITDDRWKEMDDNAIAHLHLAMADTVLSSVAEKKTAKEI 116

Query: 61  WDHFEMLYVARSLHNNIFLKRRLYTLRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNER 120
           WD    LY A+SLHN IFLKRRLYT RMSEST +T+HIN LNTLFSQLT+L   I  NER
Sbjct: 117 WDTLTGLYEAKSLHNKIFLKRRLYTFRMSESTSVTDHINNLNTLFSQLTALEYHIAENER 176

Query: 121 AELLLQSLPDSYDQLVINLTNNVLTDYLNFEDIGAVILEEENRRKNKVDKLVSSQQTEAL 180
            ELLLQSLPDSYDQL+INLTNN+LTDYL F D+ A +LEEE+RRKNK DKL +SQQTEAL
Sbjct: 177 TELLLQSLPDSYDQLIINLTNNILTDYLVFNDVAAAVLEEESRRKNKEDKLFTSQQTEAL 236

Query: 181 AVTRGRSMERGSSGSQNQGRAKSRSKKNMNATTVARR 218
            + RGRSM RGSSGSQN  R+KSRSKKN       +R
Sbjct: 237 LMMRGRSMARGSSGSQNHSRSKSRSKKNFKCYHCGKR 273

The following BLAST results are available for this feature:

BLAST of Moc11g14210 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061179.1	9.1e-81	78.54	Gag-Pol [Cucumis melo var. makuwa] >TYK06231.1 Gag-Pol [Cucumis melo var. makuwa...	[more]
TYK16527.1	1.7e-79	75.23	hypothetical protein E5676_scaffold21G003420 [Cucumis melo var. makuwa]	[more]
KAA0044949.1	1.7e-79	74.77	hypothetical protein E6C27_scaffold74G002510 [Cucumis melo var. makuwa]	[more]
KAF2314531.1	1.2e-77	72.35	hypothetical protein GH714_027382 [Hevea brasiliensis]	[more]
KAF2291279.1	2.3e-76	71.43	hypothetical protein GH714_022155 [Hevea brasiliensis] >KAF2291288.1 hypothetica...	[more]

BLAST of Moc11g14210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	2.8e-24	35.20	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	3.5e-11	25.45	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Moc11g14210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V644	4.4e-81	78.54	Gag-Pol OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00020 PE=4 S...	[more]
A0A5D3CXA6	8.3e-80	75.23	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TUN0	8.3e-80	74.77	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6A6MLA0	6.0e-78	72.35	CCHC-type domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_02738...	[more]
A0A6A6KV10	1.1e-76	71.43	CCHC-type domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_02215...	[more]

BLAST of Moc11g14210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 28..167 e-value: 1.2E-33 score: 115.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..219
None	No IPR available	PANTHER	PTHR34676	FAMILY NOT NAMED	coord: 1..209
None	No IPR available	PANTHER	PTHR34676:SF6	SUBFAMILY NOT NAMED	coord: 1..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g14210.1	Moc11g14210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding