Moc11g13810 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g13810
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr11: 10271206 .. 10276918 (+)
RNA-Seq Expression	Moc11g13810
Synteny	Moc11g13810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGTGCAACAGTCGATTGGTAATATGGAATCAAGCCAAACGAACATATCTGCACCATCGAGTTCCTCTATAGCAACAGAAGCAGCCGTCAATCCACTATATGAGTCATGGGTAACTACCGACCAGCTACTTCTTGGTTGGTTGTACAACTCTATGACTCCAGAAGTTGCAACACAGGTGATGGGGTACGAAAATGCTTGTGATTTATGGGCTGCCATACAAGAACTCTTTGGAGTACAGTCTCAGGCGGAATAAGATTATCTCCGTCAGGTATTTCAACAAACTCGAAAAGGTTCTCTTAAAATGACTGATTTTTTGCGTGTTATGAAGTCTCATGCAGACAATTTGGGTCAAGCTGGAAGCCCCGTACCCACTCGATCTTTGATTTCTCAAGTTTTGCTGGGATTAGATGAAGAGTATAATCCTGTGGTAGCAACGATCCAAGGAAAACGAGGCATTTCGTGGCCTGAAATGCAAGCCGAATTGTTGGTATTTGAGAAGAGGTTAGAACTTCAGAATTCTCATAAAAATACAGTATCTTTTAACAACTCTGTTTCTGTGAATATGGCTAATAGTAGCAGAAGTGTAAGTGGTGGAAACCAACGTCAAAATCAAAACTCTCAGCCACCATTCAACAACAATCGGGGGGGGGGGGGTGGTCGAAATCGAGGTAGAGGACGGTGGAACAACAACAATAGTCGGCAAATTTGTCAGGTGTGTGGTAAACCTGGACATTCAGCACTAACGTGCTACCATCGATTTGATAAGGAGTACAGGAACAATACACAAAGCCAGGGTAAAAACTTCAATGGCGACTCTAACCAGGGGGTTAACAACAACTCTGGACAAGGTACATCTTATGCCTTCACAGCAACCCAAAATAACAATTCTTTTTTGGCCAATCCAGAAACAGTGATAGACCCGAATTGGTATGTGGATAGTGGTGCTTCAAATCATGTCACCGCCGACTACAATAGTATGGTTCATCCTACTGAATATGGAGGTATGGAAAGAGTTACAATAGGTAATGGCGATAAATTAAAAATATCTCATGTTGGCAAATCCTGTTTAGTTTCTGACGGTGGGTTGGTCATGCTTGAAAATGTGTTGTGCGTACCTAACATAGCTAAAAATCTAGTTAGCGTGTCTAAACTCGCTAAAGACAATAACGTATACCTTGAATTTCATGCTGATTCTTATCTTGTAAAGGATATACGTTCGGGCAAGGTGGTGCTGAAAGGGGCTCTTAAGGATGGACTTTACCGACTCAATACTGTTGGAGTAGTCATTGGGAGTACTTCGACTCCAGTTGACTGTGGCTTGGAGTTGGCTGCTAATAAAACTATTTGTTCTGTGTCTCTTCCCAAATCATTCAGTAGTATAAATGTTGTGGTATCCAAGGACGTTTGGCATCGTCGACTTGGACATCCGTCTTCTCAAGTTTTTAGAAGTTTAATTAAACGTTGTAATCTGCCCTTGAAAGTTCATGATAATGTCAACTTTTGTGAAGCATGCAAATATGGTAAATCTCATGGTCTGCCTTTCCCTCTATCTAGTTCACAAGCTACTGCTCCATTCATGTTAGTGCATACTGATCTATGGGGACCTGCACCTGTTATGTCATCTGATGGGTATAGATACTATGTTCATTTTCTTGATGACTATAGCCGATTTGTATGGTCCTTTGAAGTTAAAGAGTGACACACTTTCAGCATTTAATCATTTTACTACTATGATCAAGACTCAATTTGGCAGCCATATTAAAATGTTACAGTCTAACAATGGAGGAGAATATAAACGAGTCCATCAGTTATGCCATCATTGGGGATACAATCCAGATTTTCGTGCCCGTACACTTCTGCGCAAAATGGTCGAGCTGAGCGTAAACATCGCCATATTGTTGAGACCGGTCTCACTTTACTCGCTCAAGCTTCCATGCCTCTAAGTTTTTGGTTGGAGGCCTTCCTGACATCAACCTTATTAATCAATGGTCTTCCTTCCCCTCTGCTTAATGGTAAGTCTCCAATGGAGTTATTGATACAACGAAGTCTTAACGTCTCCGAGTTGAGAATATTTGGATGTGCATGCTATCCCTTTTTACGCCCTTACCATACTCATAAGTTTCAATTTCGAACTAACAAGTGTGTTTATCTTGGTCCAAGTCCAGCTCATAAGGGTCATAAATGTCTCAGCTTATCAGGAAGAGTCTTCATCTCACGACATGTTCAATTCAATGAAGGTGATTATCCATTTGCTTCCGGATTTGGCCTTTAACAATCCACTGTGTCTGACAATTCTTTATCTCATTCCACCGCTGCTCCAAACCTACACACGTGGTTCGGTAGCCTGCCTACTCTTGAACCTGCTACTCACCCACCATCCAACACCCCTCACCCATGCCCACCAAATTTGCCTATCACCCATAACTCTCAGCCTCCTAGATCCCAGGCCCCAACAACCTCTCCAACCTTACCTCCCCAATCACGACCTAATAATCTAGAATTCCCCATAAACAGTCCTCTAAGCCATGAACCTTTACCAATTGACACATTTCCTATTTCTAGCCCATCCCACCAGCTCCCTAGTACGATTTCAGCTTACCAACATGCGTTCTCCACCCCGTCCAATCCACCATCTTTCCCTCTATCTCCACTACCCACACCTGAAGCATCTGACCTAAATATACCAACCTCGTCCCCTTTACCTTCTCTCTATATTCCTGTACCGGAAACTACCTCAGCGGTTGAAAGCTCTATCGCACCTCAGCCTCCCCCACCATTTCAGTCTATCCACCCTATGATTACAAGAGGGAAAGCTGGAATATTCAAGCCCAAGGTGCTCCTATCCTCCACTCCCACTGATTGGTTGGTAACAGAACCCACAACTGTTAAGGTTGCTCTTGCTACTCCCAGCTGGAAATCAGCGATGGATTTGGAGTATAATGCTTTTATGCAAAATCAGACTTGGACCCTCGTCCCTCCTACTGGTTCAGTCAATGTAGTTGGGTGTAAATGGGTTTTTCACATCAAACGCAATTTTGATGGCTCGATTCAACGCCACAAGGCACAGTTGGTGGCAAAAGGCTTTCATCAAAGTCCCGGTATTGACTTTTCTGAAACCTTCAGTCCTGTGGTCAAAGCCTCCACTATCCGAGTTGTTCTGTCATTAGCTGTATCTCGAGGCTGGAAACTACGACAACTTGACTTCAACAATGCCTTTCTCAACGGCAAGTTAGATGAAGATGTCTATATGTCTCAACCTCCAGGATATGCCGATCCCAGATATCCGAATTATATCTGCAAACTACATAAAGCACTTTATGGCCTCAAACAAGCTCCTCGAGCTTGGAATGTCACTCTCAAATCTGCCTTGCTTTCTTGGGGCTTCACCAACAGTAGATCAGACACATCCTTGTTCATATATCACCGCGGTCCATCCATCATCTTTCTTCTGGTCTATGTCGATGATGTCATTGTCATTGGAAATAATGTTACTCTCATAGACAGTCTTGTTGCCACACTAGATAAAACTTTTGCGTTGAAAGATCTTGGCTTGCTCAGTTATTTTCTTGGCCTCCAGGTCACTCATTTCCCTTCCGGAGTCCTTTTAACTCAGGCAAAATACATAGATGACGTGTTGCGTCGCCTGGATATGGAGGGCTTAAAGCCAGCCCCCTCCCCCACTATCTTAGGCAAACACTTGTCAATTTCTGATGGAGAGCCCATGAGTGATCCCTTTCTATACAGAAGCACTCTTGGTGCCCTTCAATATCTTACCAACACTCGGCCAGACATCGCGTATATTGTTAATCACCTGAGTCAATTTCTCAAACAGCCCACCGACATACATTGGCAAGCTGTGAAGCGGGTGTTACGCTACTTAAGTGGTACAAAACACATGGGCCTCCACATCCAACCAAGTGACACGGTCTCTCTCACAACTTATTCTGATGCAGACTGGGCATCAAACATTGATGATCGCAAATCAATTGCTACTTATTGTGTTTTCTTTGGAAACACTCTTGTCTCGTGGTCGTCAAAGAAACAAACGGCTGTTGCTCGCTCCAGTACTGAGTCCGAATATCGTGCTCTTGCTCATGCTTCCGCTGAAATTATTTGGCTGCAACAACTCCTTGGTGAACTTGGTGTCAACGTTAGTTCTCCGCCCATTATTTGGTGTGACAATATCAGTGCTGGTGCTCTAGCAACTAATCCAGTCTTCCACGCTCGGACCAAGCACATTGAAATAGATGTCCACTTTGTTCGGGATCACATGTTACGCGGTGCTCTTGAAGTTCGTTATGTACCATATGCTGATCAACTAGCCGATTGCCTGACTAAACCACTCACTCACTCTCAGTTCCACCTACTACGATCCAAACTCGGAGTGCTTGACCTACCCGCTCGTTTGCGGGGGGATGTTAACGTAACTTCAGCAAGGAAGTTGAAGCTACACACCACGTCATAGTCAAAACAAGAATATCTATTATTGTGCATTTTTGTTACAATATTTTTGTTAAAGTTTAGATTCTTTTTCTTCTAAACTTAGGATATACTTTTGTATAAATAGAGCCTTTGAGTGCCATCATAATACAGTGAAATATAAACATCATACCTTCTGTGTGAAACTTCCTCTTGTGAAATTCTAACTCTCTTCTTCTGTGGTTTCGTTTGTTTTCTTCAAAGAATACACTCTACCCCATCGAAAATCTCCACCCATATCCCTGTGAAATTTTCCACAAAATTTTGCAGAAATAAGAGTATGAAATTGGGGTAGAGAAGGTGGCGCGAAAGTCGTCCCCACCGCGCTCCAATAACAATCCTATCCTAAACTATGTACAAAGGTACAAATTAAACTCATTATCCAACTCTCCAAACTTCAATTACCTACTAAGTTTGAAAAATATCAAAATGGAAAAGGGGAAAGCTTCAATAAGTTATAATAGTTTTGGATTCAATGACTTGACCAACCATTCAATTTGAAGAAAAGATATCCAATAAAAAAAATAAGGAGATACTTAAAATTCATCAATCCCTAACTTGAATTCACACTACTAGTCAAAAAATAAGCTCTAAACCTTTACATTTCATTTAGACACCATAGATCTTGACTAAGTGTTGAAATCCATTGTCAAATTAACCTAAACTATTTTTATTACTTGAACAACTTCAACTTTTGGATTAAATTGGACAACTTAGAAGAATAATAAACAAATAGTAAACCCACTAAAAAAGCTTTTCCAAAATACTATAGATAGGGTATGTCCCACACATACTTTAAAAATCTTATCTCATAAAACACAATGTTAAAATTTATGTTAAAAACAAACTATTTACACTAACTAAAATTTTTACAATAACCCAGAAAAGATTGCATCAGAAAGCCAAGCTATATGATATTCTATTTAGGAAAATTACCATTGTTAAGAATTACTATGGTTAAGAAAACAAAAGAAATAATAATGAGTGAGTACAGAAAGTAAATTACTATTTTAGGAAAATTACCATCCTTAAGAATTACTATGGCTGTCCTTCAGAGGTGGGGTAGTACTTAACGTATATTCTAGAAAAGAAAAATGAAAAATATTCGACGAGAACATGAGGTCTTGTGGTATCGCCTATTCCATGATGTAATGATTTGAGCCTGGTACTGATTCTAGTATTGGTCAGTCCATACAACAAATCCTGATTATAGGAATATTCCACTGTAG

mRNA sequence

ATGTTTGTGCAACAGTCGATTGGTAATATGGAATCAAGCCAAACGAACATATCTGCACCATCGAGTTCCTCTATAGCAACAGAAGCAGCCGTCAATCCACTATATGAGTCATGGGTAACTACCGACCAGCTACTTCTTGGTTGGTTGTACAACTCTATGACTCCAGAAGTTGCAACACAGGTATTTCAACAAACTCGAAAAGGTTCTCTTAAAATGACTGATTTTTTGCGTGTTATGAAGTCTCATGCAGACAATTTGGGTCAAGCTGGAAGCCCCGTACCCACTCGATCTTTGATTTCTCAAGTTTTGCTGGGATTAGATGAAGAGTATAATCCTGTGGTAGCAACGATCCAAGGAAAACGAGGCATTTCGTGGCCTGAAATGCAAGCCGAATTGTTGGTATTTGAGAAGAGGAACAATACACAAAGCCAGGGTAAAAACTTCAATGGCGACTCTAACCAGGGGGTTAACAACAACTCTGGACAAGGTACATCTTATGCCTTCACAGCAACCCAAAATAACAATTCTTTTTTGGCCAATCCAGAAACAGTGATAGACCCGAATTGGTATGTGGATAGTGGTGCTTCAAATCATGTCACCGCCGACTACAATAGTATGGTTCATCCTACTGAATATGGAGGTATGGAAAGAGTTACAATAGGTAATGGCGATAAATTAAAAATATCTCATGTTGGCAAATCCTGTTTAGTTTCTGACGGTGGGTTGGTCATGCTTGAAAATGTGTTGTGCGTACCTAACATAGCTAAAAATCTAGTTAGCGTGTCTAAACTCGCTAAAGACAATAACGTATACCTTGAATTTCATGCTGATTCTTATCTTGTAAAGGATATACGTTCGGGCAAGGTGGTGCTGAAAGGGGCTCTTAAGGATGGACTTTACCGACTCAATACTGTTGGAGTAGTCATTGGGAGTACTTCGACTCCAGTTGACTGTGGCTTGGAGTTGGCTGCTAATAAAACTATTTGTTCTGTGTCTCTTCCCAAATCATTCAGTAGTATAAATGTTGTGTATTGGTCAGTCCATACAACAAATCCTGATTATAGGAATATTCCACTGTAG

Coding sequence (CDS)

ATGTTTGTGCAACAGTCGATTGGTAATATGGAATCAAGCCAAACGAACATATCTGCACCATCGAGTTCCTCTATAGCAACAGAAGCAGCCGTCAATCCACTATATGAGTCATGGGTAACTACCGACCAGCTACTTCTTGGTTGGTTGTACAACTCTATGACTCCAGAAGTTGCAACACAGGTATTTCAACAAACTCGAAAAGGTTCTCTTAAAATGACTGATTTTTTGCGTGTTATGAAGTCTCATGCAGACAATTTGGGTCAAGCTGGAAGCCCCGTACCCACTCGATCTTTGATTTCTCAAGTTTTGCTGGGATTAGATGAAGAGTATAATCCTGTGGTAGCAACGATCCAAGGAAAACGAGGCATTTCGTGGCCTGAAATGCAAGCCGAATTGTTGGTATTTGAGAAGAGGAACAATACACAAAGCCAGGGTAAAAACTTCAATGGCGACTCTAACCAGGGGGTTAACAACAACTCTGGACAAGGTACATCTTATGCCTTCACAGCAACCCAAAATAACAATTCTTTTTTGGCCAATCCAGAAACAGTGATAGACCCGAATTGGTATGTGGATAGTGGTGCTTCAAATCATGTCACCGCCGACTACAATAGTATGGTTCATCCTACTGAATATGGAGGTATGGAAAGAGTTACAATAGGTAATGGCGATAAATTAAAAATATCTCATGTTGGCAAATCCTGTTTAGTTTCTGACGGTGGGTTGGTCATGCTTGAAAATGTGTTGTGCGTACCTAACATAGCTAAAAATCTAGTTAGCGTGTCTAAACTCGCTAAAGACAATAACGTATACCTTGAATTTCATGCTGATTCTTATCTTGTAAAGGATATACGTTCGGGCAAGGTGGTGCTGAAAGGGGCTCTTAAGGATGGACTTTACCGACTCAATACTGTTGGAGTAGTCATTGGGAGTACTTCGACTCCAGTTGACTGTGGCTTGGAGTTGGCTGCTAATAAAACTATTTGTTCTGTGTCTCTTCCCAAATCATTCAGTAGTATAAATGTTGTGTATTGGTCAGTCCATACAACAAATCCTGATTATAGGAATATTCCACTGTAG

Protein sequence

MFVQQSIGNMESSQTNISAPSSSSIATEAAVNPLYESWVTTDQLLLGWLYNSMTPEVATQVFQQTRKGSLKMTDFLRVMKSHADNLGQAGSPVPTRSLISQVLLGLDEEYNPVVATIQGKRGISWPEMQAELLVFEKRNNTQSQGKNFNGDSNQGVNNNSGQGTSYAFTATQNNNSFLANPETVIDPNWYVDSGASNHVTADYNSMVHPTEYGGMERVTIGNGDKLKISHVGKSCLVSDGGLVMLENVLCVPNIAKNLVSVSKLAKDNNVYLEFHADSYLVKDIRSGKVVLKGALKDGLYRLNTVGVVIGSTSTPVDCGLELAANKTICSVSLPKSFSSINVVYWSVHTTNPDYRNIPL

Homology

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BLAST of Moc11g13810 vs. NCBI nr
Match: XP_022148963.1 (uncharacterized protein LOC111017501 [Momordica charantia])

HSP 1 Score: 241.9 bits (616), Expect = 8.5e-60
Identity = 138/194 (71.13%), Postives = 142/194 (73.20%), Query Frame = 0


Query: 1   MFVQQSIGNMESSQTNISAPSSSSIATEAAVNPLYESWVTTDQLLLGWLYNSMTPEVAT- 60
           MFVQQSIGNME+SQTNISAPSSSSIATEAA+NPLYESWVTTDQLLLGWLYNSMTPEVAT 
Sbjct: 1   MFVQQSIGNMETSQTNISAPSSSSIATEAAINPLYESWVTTDQLLLGWLYNSMTPEVATQ 60

Query: 61  ------------------------------QVFQQTRKGSLKMTDFLRVMKSHADNLGQA 120
                                         QVFQQTRKGSLKMTDFLRVMKSHADNLGQA
Sbjct: 61  VMGYENACDLWAAIQELFGVQSQAEEDYLRQVFQQTRKGSLKMTDFLRVMKSHADNLGQA 120

Query: 121 GSPVPTRSLISQVLLGLDEEYNPVVATIQGKRGISWPEMQAELLVFEKRNNTQSQGKNFN 164
           GSPVPTRSLISQVLLGLDEEYNPVVATIQGKRGISWPEMQAE       N  Q+Q     
Sbjct: 121 GSPVPTRSLISQVLLGLDEEYNPVVATIQGKRGISWPEMQAEFRSVSGGNQRQNQ----- 180

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BLAST of Moc11g13810 vs. NCBI nr
Match: KAA0057475.1 (uncharacterized protein E6C27_scaffold280G003560 [Cucumis melo var. makuwa] >TYK30171.1 uncharacterized protein E5676_scaffold216G001590 [Cucumis melo var. makuwa])

HSP 1 Score: 225.7 bits (574), Expect = 6.3e-55
Identity = 146/329 (44.38%), Postives = 185/329 (56.23%), Query Frame = 0


Query: 21  SSSSIATEAAVNPLYESWVTTDQLLLGWLYNSMTPEVATQV------------------- 80
           SSS+      VNP YE WVT+D LLLG +YNSM P+VA Q+                   
Sbjct: 55  SSSTSMNSKIVNPKYEQWVTSDMLLLGLIYNSMVPDVALQLMGFNTAKDLWEAIQNLFGI 114

Query: 81  ------------FQQTRKGSLKMTDFLRVMKSHADNLGQAGSPVPTRSLISQVLLGLDEE 140
                       FQ TR+G+ KM D+LR+MK +ADNLGQAGSPVP R LISQVLLGLDE 
Sbjct: 115 KSRAEEYFLRHTFQTTREGNYKMEDYLRIMKINADNLGQAGSPVPHRYLISQVLLGLDEV 174

Query: 141 YNPVVATIQGKRGISWPEMQAELLVFEK---------RNNTQSQGKNFNGDSNQGV--NN 200
           YNPV A IQGK  ISW +MQ+ELL+FE           + T     +   + N+G   N 
Sbjct: 175 YNPVTAVIQGKPDISWLDMQSELLIFENLVEIVLIKMESETILMAADVVEEENRGFNPNQ 234

Query: 201 NSGQGTSYAFTATQNNNSFLANPETVIDPNWYVDSGASNHVTADYNSMVHPTEYGGMERV 260
           N  Q    AF  TQ ++S LA PETV+D N YVDSGA+NHVT+D++++ +  +Y G E V
Sbjct: 235 NGKQIPDDAFITTQKSSS-LATPETVVDTNRYVDSGATNHVTSDHSNLWNIDDYSGNENV 294

Query: 261 TIGNGDKLKISHVGKSCLVSDGGLVMLENVLCVPNIAKNLVSVSKLAKDNNVYLEFHADS 308
            +GN +KL+IS VG + L      + L+ +LCVP I KN      LAKD           
Sbjct: 295 VVGNENKLQISCVGYASLTDGKNCLRLDKILCVPEIKKN------LAKD----------- 354

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BLAST of Moc11g13810 vs. NCBI nr
Match: XP_022151683.1 (uncharacterized protein LOC111019598 [Momordica charantia])

HSP 1 Score: 222.2 bits (565), Expect = 7.0e-54
Identity = 144/373 (38.61%), Postives = 191/373 (51.21%), Query Frame = 0


Query: 15  TNISAPSSSSIATEAAVNPLYESWVTTDQLLLGWLYNSMTPEVA---------------- 74
           TNI   +SS   +   +NP YE+W+  D+LLLGWLYNSM  +VA                
Sbjct: 82  TNIEGSTSSQ--SSPTLNPTYEAWIVVDKLLLGWLYNSMAADVAMQVMGFSTSRELWTAV 141

Query: 75  ---------------TQVFQQTRKGSLKMTDFLRVMKSHADNLGQAGSPVPTRSLISQVL 134
                           QVFQQT KGSL+M ++L++MKSHADNL  AGS V  R L+SQVL
Sbjct: 142 QELFGVQSRAEVDYLKQVFQQTCKGSLQMIEYLKLMKSHADNLALAGSSVSVRDLVSQVL 201

Query: 135 LGLDEEYNPVVATIQGKRGISWPEMQAELLVFEKR-------------NNTQSQGKNF-- 194
            GLDEEYNP+V  +QGK  +SW EM AELL +EKR             N TQ+   N+  
Sbjct: 202 TGLDEEYNPIVVAVQGKVNLSWSEMHAELLTYEKRLEYQNSLKSGIPINQTQTPSVNYVD 261

Query: 195 -----------NGDSNQGVNNNSGQGTSYA------------------FT---------A 254
                      NG+++ G N + G G                      FT         A
Sbjct: 262 GRSFQTNQRTNNGNNSHGSNTHRGGGYQRGSFGQRNRGRGPQPTQHKNFTPSNSGPNVFA 321

Query: 255 TQNNNSFLANPETVIDPNWYVDSGASNHVTADYNSMVHPTEYGGMERVTIGNGDKLKISH 304
             + ++ +  PETVIDP+WY DSGA++HVTA+ N++    +Y G E V + NG+KL ISH
Sbjct: 322 AHHTSTTVTTPETVIDPSWYADSGATSHVTANPNNVEQKVDYSGTENVIVANGNKLSISH 381

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BLAST of Moc11g13810 vs. NCBI nr
Match: TYK05754.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 218.0 bits (554), Expect = 1.3e-52
Identity = 129/328 (39.33%), Postives = 174/328 (53.05%), Query Frame = 0


Query: 60  QVFQQTRKGSLKMTDFLRVMKSHADNLGQAGSPVPTRSLISQVLLGLDEEYNPVVATIQG 119
           Q+FQ TRK      D+LR+MK+++D LGQAGSPVP R+ ISQ LLGLDE YNPV+A IQG
Sbjct: 79  QMFQTTRKVRASYEDYLRIMKTNSDKLGQAGSPVPKRAFISQALLGLDEVYNPVIAVIQG 138

Query: 120 KRGISWPEMQAELLVFEKR----------------------NNTQSQGKNFNGDSNQGVN 179
           K  ISW +MQ+ELL FEKR                      N   S  + ++     G N
Sbjct: 139 KPEISWIDMQSELLTFEKRLEHQDTQKNTENIIQNVVNIAQNRNSSDFRKYSNHQFHGNN 198

Query: 180 NNSGQGTSYAFTATQN----------------------------NNSFL----------- 239
            N+ QG    F   +                             N  FL           
Sbjct: 199 RNNSQGQRGGFNIGRGRGKGRGNKPTCQVCEKYGHSALVCYNRFNKEFLSPLVQDRGAQS 258

Query: 240 ---------------------ANPETVIDPNWYVDSGASNHVTADYNSMVHPTEYGGMER 299
                                A  +TVI+ NWY+DSGA+NH+T +Y+++ +P+EY G+E+
Sbjct: 259 SNFSKHSNLTVLVTGQSVNQFATADTVINLNWYIDSGATNHLTVEYSNLSNPSEYSGIEK 318

Query: 300 VTIGNGDKLKISHVGKSCLVSDGGLVMLENVLCVPNIAKNLVSVSKLAKDNNVYLEFHAD 306
           + +GNGD L IS++G + L      + L+NVLCVP+I KNLVSVSKLA+DNNVY+EFH  
Sbjct: 319 IMVGNGDSLHISYIGNAYLTDGINGLNLKNVLCVPDITKNLVSVSKLAQDNNVYIEFHGC 378

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BLAST of Moc11g13810 vs. NCBI nr
Match: XP_016902197.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo])

HSP 1 Score: 213.4 bits (542), Expect = 3.2e-51
Identity = 137/344 (39.83%), Postives = 178/344 (51.74%), Query Frame = 0


Query: 22  SSSIATEAAVNPLYESWVTTDQLLLGWLYNSMTPEVATQVFQQTRKGSL--KMTDFLRVM 81
           +SS  T   VNPL+E WVTTD LLLGWLYNSMTP+VA Q+   T    L     DF  V 
Sbjct: 92  ASSSITPRIVNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQ 151

Query: 82  KSHADNLGQAGSPVPTRSLISQVLLGLDEEYNPVVATIQGKRGISWPEMQAELLVFEKR- 141
               ++          R ++     GLDE YN V+  IQGK  ISW +MQ++LL+FEKR 
Sbjct: 152 SRAEEDF--------LRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRL 211

Query: 142 -----------NNTQSQGKN------FNGDSNQ------GVN------------------ 201
                      N TQS   N       NG  NQ      G N                  
Sbjct: 212 KHQNTQKKNTGNITQSPALNMAQRFALNGQRNQSNKKFYGYNRQHFSGQRGNLNNGPTCQ 271

Query: 202 ---------------------------------NNSGQGTSYAFTATQNNNSFLANPETV 261
                                            N S       F +TQN   F A P+TV
Sbjct: 272 LCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSVSPNPAVFVSTQNATPF-ATPDTV 331

Query: 262 IDPNWYVDSGASNHVTADYNSMVHPTEYGGMERVTIGNGDKLKISHVGKSCLVSDGGLVM 289
           +DPNWY+DSGA+NHVT + ++M +PTEY G+E+VT+GNG++L IS+VG +CL      ++
Sbjct: 332 VDPNWYIDSGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLTDGDKSLV 391

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BLAST of Moc11g13810 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.3e-18
Identity = 47/113 (41.59%), Postives = 71/113 (62.83%), Query Frame = 0


Query: 188 NWYVDSGASNHVTADYNSMVHPTEYGGMERVTIGNGDKLKISHVGKSCLVSDGGLVMLEN 247
           NW +DSGA++H+T+D+N++     Y G + V + +G  + ISH G + L +    + L N
Sbjct: 330 NWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHN 389

Query: 248 VLCVPNIAKNLVSVSKLAKDNNVYLEFHADSYLVKDIRSGKVVLKGALKDGLY 301
           +L VPNI KNL+SV +L   N V +EF   S+ VKD+ +G  +L+G  KD LY
Sbjct: 390 ILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELY 442

[Close]

BLAST of Moc11g13810 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.9e-17
Identity = 55/142 (38.73%), Postives = 80/142 (56.34%), Query Frame = 0


Query: 159 NSGQGTSYAFTATQNNNSFLANPETVIDPNWYVDSGASNHVTADYNSMVHPTEYGGMERV 218
           N  Q TS  FT  Q   +   N     + NW +DSGA++H+T+D+N++     Y G + V
Sbjct: 282 NQQQSTS-PFTPWQPRANLAVNSPYNAN-NWLLDSGATHHITSDFNNLSFHQPYTGGDDV 341

Query: 219 TIGNGDKLKISHVGKSCLVSDGGLVMLENVLCVPNIAKNLVSVSKLAKDNNVYLEFHADS 278
            I +G  + I+H G + L +    + L  VL VPNI KNL+SV +L   N V +EF   S
Sbjct: 342 MIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPAS 401

Query: 279 YLVKDIRSGKVVLKGALKDGLY 301
           + VKD+ +G  +L+G  KD LY
Sbjct: 402 FQVKDLNTGVPLLQGKTKDELY 421

[Close]

BLAST of Moc11g13810 vs. ExPASy TrEMBL
Match: A0A6J1D5J0 (uncharacterized protein LOC111017501 OS=Momordica charantia OX=3673 GN=LOC111017501 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 4.1e-60
Identity = 138/194 (71.13%), Postives = 142/194 (73.20%), Query Frame = 0


Query: 1   MFVQQSIGNMESSQTNISAPSSSSIATEAAVNPLYESWVTTDQLLLGWLYNSMTPEVAT- 60
           MFVQQSIGNME+SQTNISAPSSSSIATEAA+NPLYESWVTTDQLLLGWLYNSMTPEVAT 
Sbjct: 1   MFVQQSIGNMETSQTNISAPSSSSIATEAAINPLYESWVTTDQLLLGWLYNSMTPEVATQ 60

Query: 61  ------------------------------QVFQQTRKGSLKMTDFLRVMKSHADNLGQA 120
                                         QVFQQTRKGSLKMTDFLRVMKSHADNLGQA
Sbjct: 61  VMGYENACDLWAAIQELFGVQSQAEEDYLRQVFQQTRKGSLKMTDFLRVMKSHADNLGQA 120

Query: 121 GSPVPTRSLISQVLLGLDEEYNPVVATIQGKRGISWPEMQAELLVFEKRNNTQSQGKNFN 164
           GSPVPTRSLISQVLLGLDEEYNPVVATIQGKRGISWPEMQAE       N  Q+Q     
Sbjct: 121 GSPVPTRSLISQVLLGLDEEYNPVVATIQGKRGISWPEMQAEFRSVSGGNQRQNQ----- 180

[Close]

BLAST of Moc11g13810 vs. ExPASy TrEMBL
Match: A0A5D3E3L7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001590 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 3.1e-55
Identity = 146/329 (44.38%), Postives = 185/329 (56.23%), Query Frame = 0


Query: 21  SSSSIATEAAVNPLYESWVTTDQLLLGWLYNSMTPEVATQV------------------- 80
           SSS+      VNP YE WVT+D LLLG +YNSM P+VA Q+                   
Sbjct: 55  SSSTSMNSKIVNPKYEQWVTSDMLLLGLIYNSMVPDVALQLMGFNTAKDLWEAIQNLFGI 114

Query: 81  ------------FQQTRKGSLKMTDFLRVMKSHADNLGQAGSPVPTRSLISQVLLGLDEE 140
                       FQ TR+G+ KM D+LR+MK +ADNLGQAGSPVP R LISQVLLGLDE 
Sbjct: 115 KSRAEEYFLRHTFQTTREGNYKMEDYLRIMKINADNLGQAGSPVPHRYLISQVLLGLDEV 174

Query: 141 YNPVVATIQGKRGISWPEMQAELLVFEK---------RNNTQSQGKNFNGDSNQGV--NN 200
           YNPV A IQGK  ISW +MQ+ELL+FE           + T     +   + N+G   N 
Sbjct: 175 YNPVTAVIQGKPDISWLDMQSELLIFENLVEIVLIKMESETILMAADVVEEENRGFNPNQ 234

Query: 201 NSGQGTSYAFTATQNNNSFLANPETVIDPNWYVDSGASNHVTADYNSMVHPTEYGGMERV 260
           N  Q    AF  TQ ++S LA PETV+D N YVDSGA+NHVT+D++++ +  +Y G E V
Sbjct: 235 NGKQIPDDAFITTQKSSS-LATPETVVDTNRYVDSGATNHVTSDHSNLWNIDDYSGNENV 294

Query: 261 TIGNGDKLKISHVGKSCLVSDGGLVMLENVLCVPNIAKNLVSVSKLAKDNNVYLEFHADS 308
            +GN +KL+IS VG + L      + L+ +LCVP I KN      LAKD           
Sbjct: 295 VVGNENKLQISCVGYASLTDGKNCLRLDKILCVPEIKKN------LAKD----------- 354

[Close]

BLAST of Moc11g13810 vs. ExPASy TrEMBL
Match: A0A6J1DCW4 (uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019598 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 3.4e-54
Identity = 144/373 (38.61%), Postives = 191/373 (51.21%), Query Frame = 0


Query: 15  TNISAPSSSSIATEAAVNPLYESWVTTDQLLLGWLYNSMTPEVA---------------- 74
           TNI   +SS   +   +NP YE+W+  D+LLLGWLYNSM  +VA                
Sbjct: 82  TNIEGSTSSQ--SSPTLNPTYEAWIVVDKLLLGWLYNSMAADVAMQVMGFSTSRELWTAV 141

Query: 75  ---------------TQVFQQTRKGSLKMTDFLRVMKSHADNLGQAGSPVPTRSLISQVL 134
                           QVFQQT KGSL+M ++L++MKSHADNL  AGS V  R L+SQVL
Sbjct: 142 QELFGVQSRAEVDYLKQVFQQTCKGSLQMIEYLKLMKSHADNLALAGSSVSVRDLVSQVL 201

Query: 135 LGLDEEYNPVVATIQGKRGISWPEMQAELLVFEKR-------------NNTQSQGKNF-- 194
            GLDEEYNP+V  +QGK  +SW EM AELL +EKR             N TQ+   N+  
Sbjct: 202 TGLDEEYNPIVVAVQGKVNLSWSEMHAELLTYEKRLEYQNSLKSGIPINQTQTPSVNYVD 261

Query: 195 -----------NGDSNQGVNNNSGQGTSYA------------------FT---------A 254
                      NG+++ G N + G G                      FT         A
Sbjct: 262 GRSFQTNQRTNNGNNSHGSNTHRGGGYQRGSFGQRNRGRGPQPTQHKNFTPSNSGPNVFA 321

Query: 255 TQNNNSFLANPETVIDPNWYVDSGASNHVTADYNSMVHPTEYGGMERVTIGNGDKLKISH 304
             + ++ +  PETVIDP+WY DSGA++HVTA+ N++    +Y G E V + NG+KL ISH
Sbjct: 322 AHHTSTTVTTPETVIDPSWYADSGATSHVTANPNNVEQKVDYSGTENVIVANGNKLSISH 381

[Close]

BLAST of Moc11g13810 vs. ExPASy TrEMBL
Match: A0A5D3C373 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002430 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 6.4e-53
Identity = 129/328 (39.33%), Postives = 174/328 (53.05%), Query Frame = 0


Query: 60  QVFQQTRKGSLKMTDFLRVMKSHADNLGQAGSPVPTRSLISQVLLGLDEEYNPVVATIQG 119
           Q+FQ TRK      D+LR+MK+++D LGQAGSPVP R+ ISQ LLGLDE YNPV+A IQG
Sbjct: 79  QMFQTTRKVRASYEDYLRIMKTNSDKLGQAGSPVPKRAFISQALLGLDEVYNPVIAVIQG 138

Query: 120 KRGISWPEMQAELLVFEKR----------------------NNTQSQGKNFNGDSNQGVN 179
           K  ISW +MQ+ELL FEKR                      N   S  + ++     G N
Sbjct: 139 KPEISWIDMQSELLTFEKRLEHQDTQKNTENIIQNVVNIAQNRNSSDFRKYSNHQFHGNN 198

Query: 180 NNSGQGTSYAFTATQN----------------------------NNSFL----------- 239
            N+ QG    F   +                             N  FL           
Sbjct: 199 RNNSQGQRGGFNIGRGRGKGRGNKPTCQVCEKYGHSALVCYNRFNKEFLSPLVQDRGAQS 258

Query: 240 ---------------------ANPETVIDPNWYVDSGASNHVTADYNSMVHPTEYGGMER 299
                                A  +TVI+ NWY+DSGA+NH+T +Y+++ +P+EY G+E+
Sbjct: 259 SNFSKHSNLTVLVTGQSVNQFATADTVINLNWYIDSGATNHLTVEYSNLSNPSEYSGIEK 318

Query: 300 VTIGNGDKLKISHVGKSCLVSDGGLVMLENVLCVPNIAKNLVSVSKLAKDNNVYLEFHAD 306
           + +GNGD L IS++G + L      + L+NVLCVP+I KNLVSVSKLA+DNNVY+EFH  
Sbjct: 319 IMVGNGDSLHISYIGNAYLTDGINGLNLKNVLCVPDITKNLVSVSKLAQDNNVYIEFHGC 378

[Close]

BLAST of Moc11g13810 vs. ExPASy TrEMBL
Match: A0A1S4E1U6 (uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.6e-51
Identity = 137/344 (39.83%), Postives = 178/344 (51.74%), Query Frame = 0


Query: 22  SSSIATEAAVNPLYESWVTTDQLLLGWLYNSMTPEVATQVFQQTRKGSL--KMTDFLRVM 81
           +SS  T   VNPL+E WVTTD LLLGWLYNSMTP+VA Q+   T    L     DF  V 
Sbjct: 92  ASSSITPRIVNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQ 151

Query: 82  KSHADNLGQAGSPVPTRSLISQVLLGLDEEYNPVVATIQGKRGISWPEMQAELLVFEKR- 141
               ++          R ++     GLDE YN V+  IQGK  ISW +MQ++LL+FEKR 
Sbjct: 152 SRAEEDF--------LRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRL 211

Query: 142 -----------NNTQSQGKN------FNGDSNQ------GVN------------------ 201
                      N TQS   N       NG  NQ      G N                  
Sbjct: 212 KHQNTQKKNTGNITQSPALNMAQRFALNGQRNQSNKKFYGYNRQHFSGQRGNLNNGPTCQ 271

Query: 202 ---------------------------------NNSGQGTSYAFTATQNNNSFLANPETV 261
                                            N S       F +TQN   F A P+TV
Sbjct: 272 LCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSVSPNPAVFVSTQNATPF-ATPDTV 331

Query: 262 IDPNWYVDSGASNHVTADYNSMVHPTEYGGMERVTIGNGDKLKISHVGKSCLVSDGGLVM 289
           +DPNWY+DSGA+NHVT + ++M +PTEY G+E+VT+GNG++L IS+VG +CL      ++
Sbjct: 332 VDPNWYIDSGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLTDGDKSLV 391

The following BLAST results are available for this feature:

BLAST of Moc11g13810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148963.1	8.5e-60	71.13	uncharacterized protein LOC111017501 [Momordica charantia]	[more]
KAA0057475.1	6.3e-55	44.38	uncharacterized protein E6C27_scaffold280G003560 [Cucumis melo var. makuwa] >TYK...	[more]
XP_022151683.1	7.0e-54	38.61	uncharacterized protein LOC111019598 [Momordica charantia]	[more]
TYK05754.1	1.3e-52	39.33	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
XP_016902197.1	3.2e-51	39.83	PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]	[more]

BLAST of Moc11g13810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	1.3e-18	41.59	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.9e-17	38.73	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]

BLAST of Moc11g13810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5J0	4.1e-60	71.13	uncharacterized protein LOC111017501 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A5D3E3L7	3.1e-55	44.38	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1DCW4	3.4e-54	38.61	uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A5D3C373	6.4e-53	39.33	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A1S4E1U6	1.6e-51	39.83	uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Moc11g13810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..165
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 27..235
None	No IPR available	PANTHER	PTHR34222:SF48	SUBFAMILY NOT NAMED	coord: 27..235

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g13810.1	Moc11g13810.1	mRNA