Moc11g13660 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g13660
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Zinc finger, CCHC-type
Location	chr11: 10124637 .. 10129997 (+)
RNA-Seq Expression	Moc11g13660
Synteny	Moc11g13660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGTCAAAGGCCTTCGCGGTGGTCGTCGGTGTGGTTGTCAATCTCTAGTCGCAGTGATCTGCAGAACTTTGCGTGTGGTGGTCAGCGGCGGCCGTGACCCTCACCGACTGAAGCGGCAGCCTTGATCCTCACCGACTGAAGCGGCGGCTTCGACCCTCAGATTCAATCGGCGGCGTTCAATTCCACCAGCGGAGGCCTTTGATTCGGCAGCAGTGCTAGATTCCACCCGGAGGTGTTTAGTCTGACGGCGTGGAGGTCAAAATCATGTAAATGGTGAAGGGAGATTTAGGGATTAGGGTAAAGGAGAATTTTTTACAAAGGGGTAAAGGATATTTTTAGAGAATGCAAAATAATTTTTAATGTTGCACAATTTACTTAGCTTAAATTCCAACAAATTAGTTTAAAAGATTTTTTAGTTAGTTTTAATTTTTTTTCTCTATTTTTTCTCTATGTTTTGTAATTTACATACTCCAAAAAAAAAATTCAAAATTTGCAATATGTAAGCATTCATTAAATCTTTTTGAATGGAAGGAAAAAATCTACGAAAATTTTGGGTATTAAAATATATAGGTAAAATTAAAAAGAAAAAAGAAAAATTGCAATTATTTGGCCCTCAATATTTAAATAATATTCTGAGTCCAAAAATTCGAATAAATTTTAGGCTTTTAGGCTTTTATGTTTTCTTAACTTAAATTCCAAAAAATTAGCTTAAAATGTCTTTAAGTTAATTTCTTTCTTTTTTTCTCTATTTTTTTCCATTTTTATTTTATTTTTCTTAAGATTTTCAATATCAAATTGCAATCCTTAGTATTGAAAATACAAATATTAATTAAATCTTTTTGGATTGATGAAAAAAAAATCTATGAAAAACTGACTTCATCCACAAAAAATGCAAAACAGATTTGTGAAACCTTTGTGATGTTTTAAATTTCATGAAATCTCGAAATTTTATGACATTTCGTGACGTTTAAAAATCGTTATAAAGTACCAAAAATCATGCATCTAGAAATATGTGTTGTTTCACTCTAGTTCAATATTTTACAACATTTTTTAAAATATAATAAAAATTTTAAATTACATATTCACTTTAATTCAATATAAATATTTGTTGTTTCATAAATTCATCAAAAAAATTTGTGACCACAAATAGAGATATATTTTGTTGCTAAAAAAAACGGCTCGCCATTTAATGAAGTTTAAAAAATGTAACAAATGACGGCAAGTTCGTTAGTCGTCATGTTTTCCCACAGAAAATATCGCTCCACCATTTCATGACGTTTTTTAGACATCACGAAAAGCAACTTTTCGTGACGTTTTATAAGATGTCACTAAAATATAGTTTTCCAATTTATTGTGACGTATAAACAACATCACGAAAAGCCTTACCTTTTCACGAATAAGCCAAAAATCTTGTTACCATATCGTGATGATTCTAAAACGTCACGAAAAATACTATTCCGTGACGTTTTTTACGCGTTATGAAAAAGCTGGCAATCCGAATAACTCCGTCTTTTCCCGCCAAAAACGCACCTCAAGTTTTTCGTAACGTTTTTTAAACATCACGAAAAACTAACTATTTGCAAACCTTTTCGTGACGCATTTTATCCGTCATGAAAGGCCAAAAATCCAGAATTCTCCATTTTTTCCGTTCAAAAATGCGTTTTTTACCTTTCGTGACGTATTTAAACAATGTTGAACATTATTTTACTGTTCATTAGCGTCACAAAATCCCCAAATTCTAGTAGTGTGTGTTGCTTGCCTTCCGACAATCCTTGCACAACTTTGATGGAGACATTAGTTGTGGCAAACCATTCACCATTTCCTTTCTTTGAAGAGTCTTTGAGCCTTTAAAATTCAAATGACCATATCTGCAATGTTAAAGATGCACCAAATCTTCAGTAATTGCACCAAAACAAGTATATCCTCAAGGCTAACACATAGCGTTGAACATGAACATTCTATTCGCAAACTTTTTAATTTCCATAATCAGGCTTCTTTCTGGACTATACACTTTACACGTGTTGAAACAAGAATGAAAGCACTTTCTCTTGCAATTTCCCTACACTTAGCAAGTTATTCCTTAATTGTGACATATGAGAAACTCCAGATTGATCTCTGTTAGGATTATGGAGCCAAACCAAAGAGAAAATCTTTTTCCTATAAGGAAAATATCAATTTAAATTTTTCCTTGACCTATTTAGTTTGGGTTTTTTTATTTTCCCATTCACTTTTAGTTTTTGTCATACCATCTATTATTAATAGAGATAGATGGACCATTTGATTGGTGTGCACAAATAGAGAGTCGTGAGAAATTCTCCAAGAAGAGAGAATTAAATACTTGTGTATCCGTTCGAGAGTTTGAAATGCTTGTAGAGTGATTCGTGAGCGTTTTCTGTGTGAGGGAAATCTGAGAGAAATCATTGTAAGGGGCTTGTAAACTCTTGGGAGATTCTTCCTGACATTTTAGTAGAACCTGCAACGGTAGCAGAGAACTGGACGTAGCCTACATTGAGTGAACCAGTATAAATCTGGCGTTTAATTTTCTTCTCTCTAATCTATTTATCGTTCTTGTTACTTAGAAGTTTTAGATTATTTTATCTAATCATTTTAAGTGTAGGCTGCATTTTTTTTTCACAACAATTGGTATCAGAGGCATGGTCTAAACCTAGCTGTGTCGGTGAATCCTCGAGTGCCGAACAAAGAAGTGGTGAGTCTCGAAAGGTGTAGTCGTGGTGTAATCCGTGAGTGTGCTCTATCAGGTTGTGCCTAGAAGCCTTGGATGGGAGCAAGCTCTCGTTCGGGTCCGAGAGTAGATGGATGAGTGACTACTTAAGGGGAGGCTCGGTGGCACTTTGTTCGAGGGGAGGATTGTTGGGTTTTTAAGGTGATTGCAAATAAAGTCTCACATTGGCTAGGGAAGGGAATGATCATGGGTATATAAAAGAGGACAATTATATCCATTGGTATGAGGCTTTTTGGGTGGAACCAAAAGCAAAACCGTAAGGGCTATGCACAAAGCGGACAATATCATCCCATTGTGGAGATACATGGGGTACGAGGGGTACCGTTGTCCTTAACAATTTTTATCAGAGCCCAAGGTTGAAGAACGATGATTGGAGAAGATAAATTAGTTATTTTTTATGGAACTGATTTTTCTTACTGAAATGATCAGATATTAGATCATCTACATTCCAAGGAATTGGAATTGCCATTAGACAAGAAGCCGAATGACATGGAAGAAGCCAAATGGAAAAAGTTGGACAGGAAGGTGTTGGGTACAATTCGCCTAACATTAACAAAAAATGTGCAGAGCAGCGTAGCTAAGGAGACTACCACAATGGGGCTAATGAGTGCATTGTCCAACATATATGAGAAGCCCTCGTTAAATAATAAGGTGTATCTCGCAACTAAATTTTTTAATTTGAAGATGGATGAAGGTACATCTGTGGCTGCCCATATAAATGAATTTGATACGTTGATTAACAAACTGGTTGCTGTAGATTTAACATTTACGGATGAATTAAATGCTATCTTGTTGTTGAGATCCTTACCTGACAATTGGGAGCTTATGAAAGCAGCTATTTCAAATTCTTGTGGAAAAGAGAAATTGAAATTCGCAGATGTCAGAGATGCTGCTCTTGGAGAGGAGATTCGCAGAAAAGATTCTGGTATTGCGTCTACTTCTGGTACAACATTGAATGTGGACAGAGGAAGAAATAATAACAAAGACCACAGAAAAGGTGAAAAGTCAAGAAACAACAGACTAGAATGTTGGAATTGTGGTAAGACAAGACATCTGAGGAAGAACTGCAAAGCTCCAAAGAAAGCTGAGGGGAAAGAAGCTGGTGCAAATGTTGTTACTGAAGAAATACATGATGCTCTAGTTCTTGTAGTTGAGGGCGCTCATAACACATGGGTGGTGGATTCAGGTGCGTCTTTTCATACAACAGGACAACGTGACATTCTTGAGGATTATGTTGCAGGAAATCATGGAGAGATGTATCTTGCTGATGGAGAGCCTTTGGACATCATTAGGATTGGTGACGTTCATTTAAAAATGGCGAACGGTTCAGTCTAGAATATTCGCAAGGTACGTCATGTTCAGAATATGATGAAGAACCTGATTTCCGTGGGGCAGCTGGATAATAAAGGATGTGAAATATCCTTCGGTCAAGGAAACTGGAAAGTTACAAAGGGTTCGATGGTGATCACTCGAGAAAAAAAGTTAAGAACTTTGTATGTCAACGACAACGACAAAGATATGATAGTTGTTGTAGAACATTCGAGTCATACCCAATTATGACACAGTAGGCTAGGACATATGAGTGAAAAAGGTAGAAAATTCTTCACTTTATAGGGAAGCTAGAAGGACTTAAGGCAATGGAACACAAGTTATCCGAAGGATGCATATTTGGGAAACAGAGTCGTGTCAATTTCTCAAAGACAGGTTCAACGCTAAAGTCTACAAAATTGGAGTTGGTTCACACTGATGTGTGGGGGCCTTTTGAAGTTTCTTCCATTGGAGGTTTCAGATACTATGCAGCATTCATAAACGACTCAAGCAGGAATGTATGGACTTATTTTATTAAACATAAGTCTGATGTGTTTTCTGTTTTCAAAACATGGAAGGCTATGGTAGAGAATGAGACAGGTCTGAAAATCAAAAGCTTGAGGTCAGATAATGGTGGTGAGTGTGTTAGTAGGGAATTCAAGAAATATTGTGAAGACAATGGAATTGTGATGGTAAAGACTCTTCCAGGGACACCACAGCAAAATGATGTGGCAGAGAGAATGAATAGGATGTTGAATGAGTATGCTGAGAGCATGAGAATACATGTAAAATTGTCTAAAATGTTTTGGGCAGAGGCAATCAATTGTGTGACCTATCTGATCAATAGGAGCCCGACCACATTACTAGACTTCAAATTGCCTGAAGAAGTTTGGACTGGTAAACAAGTAAACATTTCCCATCTAAAGGTTTTTGGCTGTGTATTTACCTTCACATTGATGCTGCAGACAGGAGTAAATTGGATGCCAAATCCAAGAAATGCTTCTTTATTGGGTATGGTGGAGCTGAGATAGGTTACAGATTTTGGGATGACCAAAACAAGAAGATTATCAGAAGCAAGAACGTGATCTTCAATGAGAAAGTCTTATACAATGACAGAAATAAAGTTGATTCAGGAAAGACAGAGTTAGATGGAAGCATAGAGAATACTCAGTATATAAGTCCTCCTGAGGTCGAGACTAAAACAACAGAGATTGAAGATCAGAATACAATTACTCCTGAAGAAACAGCTGTGAGATCTGATGAACAAATTGAGGAATCCGATGAACCAGTTGTGGAAACTGATTAG

mRNA sequence

ATGGTGGTCAAAGGCCTTCGCGGTGGTCGTCGGTGTGGTTGTCAATCTCTAGTCGCAGTGATCTGCAGAACTTTGCGTGTGGTGGTTGTGCCTAGAAGCCTTGGATGGGAGCAAGCTCTCGTTCGGATATTAGATCATCTACATTCCAAGGAATTGGAATTGCCATTAGACAAGAAGCCGAATGACATGGAAGAAGCCAAATGGAAAAAGTTGGACAGGAAGGTGTTGGGTACAATTCGCCTAACATTAACAAAAAATGTGCAGAGCAGCGTAGCTAAGGAGACTACCACAATGGGGCTAATGAGTGCATTGTCCAACATATATGAGAAGCCCTCGTTAAATAATAAGGTGTATCTCGCAACTAAATTTTTTAATTTGAAGATGGATGAAGGTACATCTGTGGCTGCCCATATAAATGAATTTGATACGTTGATTAACAAACTGGTTGCTGTAGATTTAACATTTACGGATGAATTAAATGCTATCTTGTTGTTGAGATCCTTACCTGACAATTGGGAGCTTATGAAAGCAGCTATTTCAAATTCTTGTGGAAAAGAGAAATTGAAATTCGCAGATGTCAGAGATGCTGCTCTTGGAGAGGAGATTCGCAGAAAAGATTCTGGTATTGCGTCTACTTCTGGTACAACATTGAATGTGGACAGAGGAAGAAATAATAACAAAGACCACAGAAAAGGTGAAAAGTCAAGAAACAACAGACTAGAATGTTGGAATTGTGGTAAGACAAGACATCTGAGGAAGAACTGCAAAGCTCCAAAGAAAGCTGAGGGGAAAGAAGCTGGTGCAAATGTTGTTACTGAAGAAATACATGATGCTCTAGTTCTTGTAGTTGAGGGCGCTCATAACACATGGGTGGTGGATTCAGGTGCGTCTTTTCATACAACAGGACAACGTGACATTCTTGAGGATTATGTTGCAGGAAATCATGGAGAGATGTATCTTGCTGATGGAGAGCCTTTGGACATCATTAGGATTGGAAAGACAGAGTTAGATGGAAGCATAGAGAATACTCAGTATATAAGTCCTCCTGAGGTCGAGACTAAAACAACAGAGATTGAAGATCAGAATACAATTACTCCTGAAGAAACAGCTGTGAGATCTGATGAACAAATTGAGGAATCCGATGAACCAGTTGTGGAAACTGATTAG

Coding sequence (CDS)

ATGGTGGTCAAAGGCCTTCGCGGTGGTCGTCGGTGTGGTTGTCAATCTCTAGTCGCAGTGATCTGCAGAACTTTGCGTGTGGTGGTTGTGCCTAGAAGCCTTGGATGGGAGCAAGCTCTCGTTCGGATATTAGATCATCTACATTCCAAGGAATTGGAATTGCCATTAGACAAGAAGCCGAATGACATGGAAGAAGCCAAATGGAAAAAGTTGGACAGGAAGGTGTTGGGTACAATTCGCCTAACATTAACAAAAAATGTGCAGAGCAGCGTAGCTAAGGAGACTACCACAATGGGGCTAATGAGTGCATTGTCCAACATATATGAGAAGCCCTCGTTAAATAATAAGGTGTATCTCGCAACTAAATTTTTTAATTTGAAGATGGATGAAGGTACATCTGTGGCTGCCCATATAAATGAATTTGATACGTTGATTAACAAACTGGTTGCTGTAGATTTAACATTTACGGATGAATTAAATGCTATCTTGTTGTTGAGATCCTTACCTGACAATTGGGAGCTTATGAAAGCAGCTATTTCAAATTCTTGTGGAAAAGAGAAATTGAAATTCGCAGATGTCAGAGATGCTGCTCTTGGAGAGGAGATTCGCAGAAAAGATTCTGGTATTGCGTCTACTTCTGGTACAACATTGAATGTGGACAGAGGAAGAAATAATAACAAAGACCACAGAAAAGGTGAAAAGTCAAGAAACAACAGACTAGAATGTTGGAATTGTGGTAAGACAAGACATCTGAGGAAGAACTGCAAAGCTCCAAAGAAAGCTGAGGGGAAAGAAGCTGGTGCAAATGTTGTTACTGAAGAAATACATGATGCTCTAGTTCTTGTAGTTGAGGGCGCTCATAACACATGGGTGGTGGATTCAGGTGCGTCTTTTCATACAACAGGACAACGTGACATTCTTGAGGATTATGTTGCAGGAAATCATGGAGAGATGTATCTTGCTGATGGAGAGCCTTTGGACATCATTAGGATTGGAAAGACAGAGTTAGATGGAAGCATAGAGAATACTCAGTATATAAGTCCTCCTGAGGTCGAGACTAAAACAACAGAGATTGAAGATCAGAATACAATTACTCCTGAAGAAACAGCTGTGAGATCTGATGAACAAATTGAGGAATCCGATGAACCAGTTGTGGAAACTGATTAG

Protein sequence

MVVKGLRGGRRCGCQSLVAVICRTLRVVVVPRSLGWEQALVRILDHLHSKELELPLDKKPNDMEEAKWKKLDRKVLGTIRLTLTKNVQSSVAKETTTMGLMSALSNIYEKPSLNNKVYLATKFFNLKMDEGTSVAAHINEFDTLINKLVAVDLTFTDELNAILLLRSLPDNWELMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGIASTSGTTLNVDRGRNNNKDHRKGEKSRNNRLECWNCGKTRHLRKNCKAPKKAEGKEAGANVVTEEIHDALVLVVEGAHNTWVVDSGASFHTTGQRDILEDYVAGNHGEMYLADGEPLDIIRIGKTELDGSIENTQYISPPEVETKTTEIEDQNTITPEETAVRSDEQIEESDEPVVETD

Homology

[Close]

BLAST of Moc11g13660 vs. NCBI nr
Match: XP_022152845.1 (uncharacterized protein LOC111020469 [Momordica charantia])

HSP 1 Score: 386.7 bits (992), Expect = 2.3e-103
Identity = 210/301 (69.77%), Postives = 236/301 (78.41%), Query Frame = 0


Query: 43  ILDHLHSKELELPLDKKPNDMEEAKWKKLDRKVLGTIRLTLTKNVQSSVAKETTTMGLMS 102
           +LD+LHSKELE PL+ KP+DM E +WKKLDRKVLGTIRLTLTKNVQSSVAK TTTMGLM+
Sbjct: 577 VLDYLHSKELEFPLEGKPDDMGEKEWKKLDRKVLGTIRLTLTKNVQSSVAK-TTTMGLMN 636

Query: 103 ALSNIYEKPSLNNKVYLATKFFNLKMDEGTSVAAHINEFDTLINKLVAVDLTFTDELNAI 162
           AL+N+YEK S+NNKVYLATKFFNLKM E T + AH+NEFD LINKLVAVDL F+ E+ AI
Sbjct: 637 ALANMYEKASVNNKVYLATKFFNLKMAESTPITAHLNEFDVLINKLVAVDLEFSHEVYAI 696

Query: 163 LLLRSLPDNWELMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGIASTSGTTLNVDRG 222
           LLLRSLPD+WE M+AAISNSC KEKLKF DVRDAAL EEIRRKDSGIA TSG+ LNVDRG
Sbjct: 697 LLLRSLPDSWEPMRAAISNSCEKEKLKFEDVRDAALAEEIRRKDSGIAPTSGSVLNVDRG 756

Query: 223 RNNN-------KDHRKGEKSRNNRLECWNCGKTRHLRKNCKAPKKAEGKEAGANVVTEEI 282
           RNNN       K      +SRN+R ECWNCGK  HL+ NCKAPKK EG EA AN V E+I
Sbjct: 757 RNNNRGYGNRGKSKNNRSRSRNSRFECWNCGKIGHLKSNCKAPKKNEGNEADAN-VAEQI 816

Query: 283 HDALVLVVEGAHNTWVVDSGASFHTTGQRDILEDYVAGNHGEMYLADGEPLDIIRIGKTE 337
           HDALV+ VE AH+TWV+DS                  GNHG++YLADGEPLDII IG+  
Sbjct: 817 HDALVIAVESAHDTWVMDS------------------GNHGKVYLADGEPLDIIGIGEVN 857

[Close]

BLAST of Moc11g13660 vs. NCBI nr
Match: PON60333.1 (Zinc finger, CCHC-type [Parasponia andersonii])

HSP 1 Score: 319.3 bits (817), Expect = 4.5e-83
Identity = 169/322 (52.48%), Postives = 234/322 (72.67%), Query Frame = 0


Query: 41  VRILDHLHSKELELPLD-KKPNDMEEAKWKKLDRKVLGTIRLTLTKNVQSSVAKETTTMG 100
           ++I D+LH+K+L  PL  KKP  ME+  W+ LDR+VLG IRLTLTKNV  +VA+  TT  
Sbjct: 24  LQINDYLHNKKLHQPLSRKKPEKMEDDDWQLLDRQVLGIIRLTLTKNVAHNVAEAKTTAE 83

Query: 101 LMSALSNIYEKPSLNNKVYLATKFFNLKMDEGTSVAAHINEFDTLINKLVAVDLTFTDEL 160
           +MS LS++YEKPS NNKV+L  K F LKM EG SVA HINEF+T++++L +V++ F +E+
Sbjct: 84  MMSILSDMYEKPSANNKVHLMKKLFYLKMGEGASVATHINEFNTIVSQLTSVEINFDNEV 143

Query: 161 NAILLLRSLPDNWELMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGIASTSGTTLNV 220
            A++LL SLP +WE M+AA+SNS GKEKL+F DVRD  L EE+RR DSG  ++S + LN+
Sbjct: 144 RALILLASLPTSWEPMRAAVSNSVGKEKLQFNDVRDRILAEEVRRIDSGEGASSSSALNL 203

Query: 221 -----------DRGRNNNKDHRKGEKSRN-NRLECWNCGKTRHLRKNCKAPKKAEGKEAG 280
                      +RGR+ +K      KSR+  R+ECWNCGKT H++KNC+AP+K + +   
Sbjct: 204 KNRDRSSEKNSNRGRDKSKSRNGRNKSRSKRRMECWNCGKTGHIKKNCRAPRKDDSRN-D 263

Query: 281 ANVVTEEIHDALVLVVEGAHNTWVVDSGASFHTTGQRDILEDYVAGNHGEMYLADGEPLD 340
           AN +T+E+ DAL+L V+   ++WV+DSGASFHTT  RD+LE+Y+AGN+G++YLADGEPLD
Sbjct: 264 ANAITDEVQDALLLSVDNPIDSWVLDSGASFHTTAHRDVLENYIAGNYGKVYLADGEPLD 323

Query: 341 IIRIGKTEL---DGSIENTQYI 347
           I+ +G   L   +GS+   Q +
Sbjct: 324 IVGMGDIRLKMSNGSVWKIQKV 344

[Close]

BLAST of Moc11g13660 vs. NCBI nr
Match: PON63051.1 (Zinc finger, CCHC-type [Trema orientale])

HSP 1 Score: 314.3 bits (804), Expect = 1.5e-81
Identity = 170/322 (52.80%), Postives = 229/322 (71.12%), Query Frame = 0


Query: 41  VRILDHLHSKELELPLD-KKPNDMEEAKWKKLDRKVLGTIRLTLTKNVQSSVAKETTTMG 100
           ++I D+LHSK+L  PL  KKP  ME+  W+  DR+VLG IRLTLTKNV  +VA+  TT  
Sbjct: 24  LQINDYLHSKKLHQPLSGKKPEKMEDDDWQLFDRQVLGVIRLTLTKNVAHNVAEAKTTAE 83

Query: 101 LMSALSNIYEKPSLNNKVYLATKFFNLKMDEGTSVAAHINEFDTLINKLVAVDLTFTDEL 160
           +MS LS+IYEK S NNKVYL  K F LKM EG SVA HINEF+T++++L +V++ F DE+
Sbjct: 84  MMSILSDIYEKLSANNKVYLMKKLFYLKMGEGASVATHINEFNTIVSQLTSVEINFDDEV 143

Query: 161 NAILLLRSLPDNWELMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGIASTSGTTLNV 220
            A++LL SLP +WE M+AA+SNS GK KL+F DVRD  L EE+RR DSG  ++S + LN+
Sbjct: 144 RALILLASLPTSWESMRAAVSNSVGKGKLQFNDVRDRILAEEVRRIDSGEGASSSSALNL 203

Query: 221 DR-----------GRNNNKDHRKGEKSRNNRL-ECWNCGKTRHLRKNCKAPKKAEGKEAG 280
           +            GR  +K     +KSR+ R  ECWNCGKT H++KNC+AP+K + +   
Sbjct: 204 ENRDRSSEKNSNWGRGRSKSRNGRDKSRSERRPECWNCGKTGHIKKNCRAPRKDDSRN-D 263

Query: 281 ANVVTEEIHDALVLVVEGAHNTWVVDSGASFHTTGQRDILEDYVAGNHGEMYLADGEPLD 340
           AN VT+E+ DAL+L V+   ++WV+DSGASFHTT  R++LE+YVAGN+G++YLADGEPLD
Sbjct: 264 ANAVTDEVQDALLLSVDNPIDSWVLDSGASFHTTAHRNVLENYVAGNYGKVYLADGEPLD 323

Query: 341 IIRIGKTEL---DGSIENTQYI 347
           I+ +G   L   +GS+   Q +
Sbjct: 324 IVGMGDIRLKMSNGSVWKIQKV 344

[Close]

BLAST of Moc11g13660 vs. NCBI nr
Match: CAN81130.1 (hypothetical protein VITISV_003944 [Vitis vinifera])

HSP 1 Score: 303.9 bits (777), Expect = 2.0e-78
Identity = 156/310 (50.32%), Postives = 222/310 (71.61%), Query Frame = 0


Query: 41  VRILDHLHSKELELP-LDKKPNDMEEAKWKKLDRKVLGTIRLTLTKNVQSSVAKETTTMG 100
           ++I D+L+ ++L LP L  KP  M+  +W  LDR+VLG IRLTL+++V  +V KE TT  
Sbjct: 24  MQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSRSVAHNVVKEKTTXD 83

Query: 101 LMSALSNIYEKPSLNNKVYLATKFFNLKMDEGTSVAAHINEFDTLINKLVAVDLTFTDEL 160
           LM ALS +YEKPS NNKV+L TK FNLKM E  SVA H+NEF+T+ N+L +V++ F DE+
Sbjct: 84  LMKALSGMYEKPSANNKVHLMTKLFNLKMAENASVAQHLNEFNTITNQLSSVEIDFDDEI 143

Query: 161 NAILLLRSLPDNWELMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGIASTSGTTLNV 220
            A+++L SLP++WE M+ A+SNS GKEKLK+ D+RD  L EEIRR+D+G  S SG+ LN+
Sbjct: 144 RALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRRDAGETSGSGSALNL 203

Query: 221 D-RGRNNNKDHRKGEKSRNN------------RLECWNCGKTRHLRKNCKAPKKAEGKEA 280
           + RGR NN++  +G  +  N            +++CWNCGKT H ++ CK+PKK + ++ 
Sbjct: 204 ETRGRGNNRNSNQGRSNSRNSNRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKK-KNEDD 263

Query: 281 GANVVTEEIHDALVLVVEGAHNTWVVDSGASFHTTGQRDILEDYVAGNHGEMYLADGEPL 337
            AN VTEE+ DAL+L V+   + WV+DSGASFHTT  R+I+++YVAG+ G++YLADG  L
Sbjct: 264 SANAVTEEVQDALLLAVDSPLDDWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSAL 323

[Close]

BLAST of Moc11g13660 vs. NCBI nr
Match: CAN60106.1 (hypothetical protein VITISV_028182 [Vitis vinifera])

HSP 1 Score: 303.1 bits (775), Expect = 3.4e-78
Identity = 156/310 (50.32%), Postives = 222/310 (71.61%), Query Frame = 0


Query: 41  VRILDHLHSKELELP-LDKKPNDMEEAKWKKLDRKVLGTIRLTLTKNVQSSVAKETTTMG 100
           ++I D+L+ ++L LP L  KP  M+  +W  LDR+VLG IRLTL+++V  +V KE TT  
Sbjct: 24  MQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSRSVAHNVVKEKTTTD 83

Query: 101 LMSALSNIYEKPSLNNKVYLATKFFNLKMDEGTSVAAHINEFDTLINKLVAVDLTFTDEL 160
           LM ALS +YEKPS NNKV+L  K FNLKM E  SVA H+NEF+T+ N+L +V++ F DE+
Sbjct: 84  LMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTITNQLSSVEIDFDDEI 143

Query: 161 NAILLLRSLPDNWELMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGIASTSGTTLNV 220
            A+++L SLP++WE M+ A+SNS GKEKLK+ D+RD  L EEIRR+D+G  S SG+ LN+
Sbjct: 144 RALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRRDAGETSGSGSALNL 203

Query: 221 D-RGRNNNKDHRKGEKSRNN------------RLECWNCGKTRHLRKNCKAPKKAEGKEA 280
           + RGR NN++  +G  +  N            +++CWNCGKT H ++ CK+PKK + ++ 
Sbjct: 204 ETRGRGNNRNSNQGRSNSRNSNRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKK-KNEDD 263

Query: 281 GANVVTEEIHDALVLVVEGAHNTWVVDSGASFHTTGQRDILEDYVAGNHGEMYLADGEPL 337
            ANVVTEE+ DAL+L V+   + WV+DSGASFHTT  R+I+++YVAG+ G++YLADG  L
Sbjct: 264 SANVVTEEVQDALLLAVDSPLDDWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSAL 323

[Close]

BLAST of Moc11g13660 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.5e-28
Identity = 96/316 (30.38%), Postives = 158/316 (50.00%), Query Frame = 0


Query: 42  RILDHLHSKELELPLD---KKPNDMEEAKWKKLDRKVLGTIRLTLTKNVQSSVAKETTTM 101
           R+ D L  + L   LD   KKP+ M+   W  LD +    IRL L+ +V +++  E T  
Sbjct: 23  RMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTAR 82

Query: 102 GLMSALSNIYEKPSLNNKVYLATKFFNLKMDEGTSVAAHINEFDTLINKLVAVDLTFTDE 161
           G+ + L ++Y   +L NK+YL  + + L M EGT+  +H+N F+ LI +L  + +   +E
Sbjct: 83  GIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEE 142

Query: 162 LNAILLLRSLPDNWELMKAAISNSCGKEKLKFADVRDA-ALGEEIRRKDSGIAS---TSG 221
             AILLL SLP +++ +   I +  GK  ++  DV  A  L E++R+K         T G
Sbjct: 143 DKAILLLNSLPSSYDNLATTILH--GKTTIELKDVTSALLLNEKMRKKPENQGQALITEG 202

Query: 222 TTLNVDRGRNN-NKDHRKGE---KSRNNRLECWNCGKTRHLRKNCKAPKKAEGKEAGA-- 281
              +  R  NN  +   +G+   +S++    C+NC +  H +++C  P+K +G+ +G   
Sbjct: 203 RGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKN 262

Query: 282 ------------NVVTEEIHDALVLVVEGAHNTWVVDSGASFHTTGQRDILEDYVAGNHG 333
                       NVV     +   + + G  + WVVD+ AS H T  RD+   YVAG+ G
Sbjct: 263 DDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFG 322

[Close]

BLAST of Moc11g13660 vs. ExPASy TrEMBL
Match: A0A6J1DF43 (uncharacterized protein LOC111020469 OS=Momordica charantia OX=3673 GN=LOC111020469 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 1.1e-103
Identity = 210/301 (69.77%), Postives = 236/301 (78.41%), Query Frame = 0


Query: 43  ILDHLHSKELELPLDKKPNDMEEAKWKKLDRKVLGTIRLTLTKNVQSSVAKETTTMGLMS 102
           +LD+LHSKELE PL+ KP+DM E +WKKLDRKVLGTIRLTLTKNVQSSVAK TTTMGLM+
Sbjct: 577 VLDYLHSKELEFPLEGKPDDMGEKEWKKLDRKVLGTIRLTLTKNVQSSVAK-TTTMGLMN 636

Query: 103 ALSNIYEKPSLNNKVYLATKFFNLKMDEGTSVAAHINEFDTLINKLVAVDLTFTDELNAI 162
           AL+N+YEK S+NNKVYLATKFFNLKM E T + AH+NEFD LINKLVAVDL F+ E+ AI
Sbjct: 637 ALANMYEKASVNNKVYLATKFFNLKMAESTPITAHLNEFDVLINKLVAVDLEFSHEVYAI 696

Query: 163 LLLRSLPDNWELMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGIASTSGTTLNVDRG 222
           LLLRSLPD+WE M+AAISNSC KEKLKF DVRDAAL EEIRRKDSGIA TSG+ LNVDRG
Sbjct: 697 LLLRSLPDSWEPMRAAISNSCEKEKLKFEDVRDAALAEEIRRKDSGIAPTSGSVLNVDRG 756

Query: 223 RNNN-------KDHRKGEKSRNNRLECWNCGKTRHLRKNCKAPKKAEGKEAGANVVTEEI 282
           RNNN       K      +SRN+R ECWNCGK  HL+ NCKAPKK EG EA AN V E+I
Sbjct: 757 RNNNRGYGNRGKSKNNRSRSRNSRFECWNCGKIGHLKSNCKAPKKNEGNEADAN-VAEQI 816

Query: 283 HDALVLVVEGAHNTWVVDSGASFHTTGQRDILEDYVAGNHGEMYLADGEPLDIIRIGKTE 337
           HDALV+ VE AH+TWV+DS                  GNHG++YLADGEPLDII IG+  
Sbjct: 817 HDALVIAVESAHDTWVMDS------------------GNHGKVYLADGEPLDIIGIGEVN 857

[Close]

BLAST of Moc11g13660 vs. ExPASy TrEMBL
Match: A0A2P5CH01 (Zinc finger, CCHC-type OS=Parasponia andersonii OX=3476 GN=PanWU01x14_153190 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 2.2e-83
Identity = 169/322 (52.48%), Postives = 234/322 (72.67%), Query Frame = 0


Query: 41  VRILDHLHSKELELPLD-KKPNDMEEAKWKKLDRKVLGTIRLTLTKNVQSSVAKETTTMG 100
           ++I D+LH+K+L  PL  KKP  ME+  W+ LDR+VLG IRLTLTKNV  +VA+  TT  
Sbjct: 24  LQINDYLHNKKLHQPLSRKKPEKMEDDDWQLLDRQVLGIIRLTLTKNVAHNVAEAKTTAE 83

Query: 101 LMSALSNIYEKPSLNNKVYLATKFFNLKMDEGTSVAAHINEFDTLINKLVAVDLTFTDEL 160
           +MS LS++YEKPS NNKV+L  K F LKM EG SVA HINEF+T++++L +V++ F +E+
Sbjct: 84  MMSILSDMYEKPSANNKVHLMKKLFYLKMGEGASVATHINEFNTIVSQLTSVEINFDNEV 143

Query: 161 NAILLLRSLPDNWELMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGIASTSGTTLNV 220
            A++LL SLP +WE M+AA+SNS GKEKL+F DVRD  L EE+RR DSG  ++S + LN+
Sbjct: 144 RALILLASLPTSWEPMRAAVSNSVGKEKLQFNDVRDRILAEEVRRIDSGEGASSSSALNL 203

Query: 221 -----------DRGRNNNKDHRKGEKSRN-NRLECWNCGKTRHLRKNCKAPKKAEGKEAG 280
                      +RGR+ +K      KSR+  R+ECWNCGKT H++KNC+AP+K + +   
Sbjct: 204 KNRDRSSEKNSNRGRDKSKSRNGRNKSRSKRRMECWNCGKTGHIKKNCRAPRKDDSRN-D 263

Query: 281 ANVVTEEIHDALVLVVEGAHNTWVVDSGASFHTTGQRDILEDYVAGNHGEMYLADGEPLD 340
           AN +T+E+ DAL+L V+   ++WV+DSGASFHTT  RD+LE+Y+AGN+G++YLADGEPLD
Sbjct: 264 ANAITDEVQDALLLSVDNPIDSWVLDSGASFHTTAHRDVLENYIAGNYGKVYLADGEPLD 323

Query: 341 IIRIGKTEL---DGSIENTQYI 347
           I+ +G   L   +GS+   Q +
Sbjct: 324 IVGMGDIRLKMSNGSVWKIQKV 344

[Close]

BLAST of Moc11g13660 vs. ExPASy TrEMBL
Match: A0A2P5CPV0 (Zinc finger, CCHC-type OS=Trema orientale OX=63057 GN=TorRG33x02_277340 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 7.1e-82
Identity = 170/322 (52.80%), Postives = 229/322 (71.12%), Query Frame = 0


Query: 41  VRILDHLHSKELELPLD-KKPNDMEEAKWKKLDRKVLGTIRLTLTKNVQSSVAKETTTMG 100
           ++I D+LHSK+L  PL  KKP  ME+  W+  DR+VLG IRLTLTKNV  +VA+  TT  
Sbjct: 24  LQINDYLHSKKLHQPLSGKKPEKMEDDDWQLFDRQVLGVIRLTLTKNVAHNVAEAKTTAE 83

Query: 101 LMSALSNIYEKPSLNNKVYLATKFFNLKMDEGTSVAAHINEFDTLINKLVAVDLTFTDEL 160
           +MS LS+IYEK S NNKVYL  K F LKM EG SVA HINEF+T++++L +V++ F DE+
Sbjct: 84  MMSILSDIYEKLSANNKVYLMKKLFYLKMGEGASVATHINEFNTIVSQLTSVEINFDDEV 143

Query: 161 NAILLLRSLPDNWELMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGIASTSGTTLNV 220
            A++LL SLP +WE M+AA+SNS GK KL+F DVRD  L EE+RR DSG  ++S + LN+
Sbjct: 144 RALILLASLPTSWESMRAAVSNSVGKGKLQFNDVRDRILAEEVRRIDSGEGASSSSALNL 203

Query: 221 DR-----------GRNNNKDHRKGEKSRNNRL-ECWNCGKTRHLRKNCKAPKKAEGKEAG 280
           +            GR  +K     +KSR+ R  ECWNCGKT H++KNC+AP+K + +   
Sbjct: 204 ENRDRSSEKNSNWGRGRSKSRNGRDKSRSERRPECWNCGKTGHIKKNCRAPRKDDSRN-D 263

Query: 281 ANVVTEEIHDALVLVVEGAHNTWVVDSGASFHTTGQRDILEDYVAGNHGEMYLADGEPLD 340
           AN VT+E+ DAL+L V+   ++WV+DSGASFHTT  R++LE+YVAGN+G++YLADGEPLD
Sbjct: 264 ANAVTDEVQDALLLSVDNPIDSWVLDSGASFHTTAHRNVLENYVAGNYGKVYLADGEPLD 323

Query: 341 IIRIGKTEL---DGSIENTQYI 347
           I+ +G   L   +GS+   Q +
Sbjct: 324 IVGMGDIRLKMSNGSVWKIQKV 344

[Close]

BLAST of Moc11g13660 vs. ExPASy TrEMBL
Match: A0A2N9IKI1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31378 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 9.2e-82
Identity = 164/307 (53.42%), Postives = 228/307 (74.27%), Query Frame = 0


Query: 41  VRILDHLHSKELELP-LDKKPNDMEEAKWKKLDRKVLGTIRLTLTKNVQSSVAKETTTMG 100
           ++I D+L+ K+L LP L +KP DME+A+W  LDR+VLG IRLTL++ V  +V KE TT  
Sbjct: 24  MQIEDYLYGKKLHLPLLGEKPEDMEDAEWTLLDRQVLGVIRLTLSRTVAHNVVKEKTTAE 83

Query: 101 LMSALSNIYEKPSLNNKVYLATKFFNLKMDEGTSVAAHINEFDTLINKLVAVDLTFTDEL 160
           LM+AL  +YEKPS NNKV+L  K FNLKM EGT+VA H+NEF+T+ N+L +V++ F DE+
Sbjct: 84  LMTALCGMYEKPSANNKVHLMKKLFNLKMAEGTAVAQHLNEFNTITNQLSSVEIEFDDEI 143

Query: 161 NAILLLRSLPDNWELMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGIASTSGTTLNV 220
            A+++L SLP++WE M+ A+SNS GK KLK+ D+RD  LGEE+RR+D+G  S+SG+ LN+
Sbjct: 144 RALIVLASLPNSWEAMRMAVSNSAGKGKLKYNDIRDLILGEEVRRRDAGETSSSGSALNL 203

Query: 221 D-RGRNNNKDHRKG-EKSRNNR--------LECWNCGKTRHLRKNCKAPKKAEGKEAGAN 280
           + RGR  ++++ +G  KSR  R        LECWNCGKT H+RKNC   KK + +   AN
Sbjct: 204 EARGRGKDRNYNRGRSKSRKGRSKSKPGRQLECWNCGKTGHIRKNCWELKK-KNENDSAN 263

Query: 281 VVTEEIHDALVLVVEGAHNTWVVDSGASFHTTGQRDILEDYVAGNHGEMYLADGEPLDII 337
           VVTEE+HDAL+L V+    +WV+DSGASFHTT  R+I+++YVAG+ G++YLAD E LD++
Sbjct: 264 VVTEEVHDALLLSVDSPIESWVLDSGASFHTTAHREIIQNYVAGDFGKVYLADDEALDVV 323

[Close]

BLAST of Moc11g13660 vs. ExPASy TrEMBL
Match: A0A2N9GHK9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26945 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 9.2e-82
Identity = 164/307 (53.42%), Postives = 228/307 (74.27%), Query Frame = 0


Query: 41  VRILDHLHSKELELP-LDKKPNDMEEAKWKKLDRKVLGTIRLTLTKNVQSSVAKETTTMG 100
           ++I D+L+ K+L LP L +KP DME+A+W  LDR+VLG IRLTL++ V  +V KE TT  
Sbjct: 24  MQIEDYLYGKKLHLPLLGEKPEDMEDAEWTLLDRQVLGVIRLTLSRTVAHNVVKEKTTAE 83

Query: 101 LMSALSNIYEKPSLNNKVYLATKFFNLKMDEGTSVAAHINEFDTLINKLVAVDLTFTDEL 160
           LM+AL  +YEKPS NNKV+L  K FNLKM EGT+VA H+NEF+T+ N+L +V++ F DE+
Sbjct: 84  LMTALCGMYEKPSANNKVHLMKKLFNLKMAEGTAVAQHLNEFNTITNQLSSVEIEFDDEI 143

Query: 161 NAILLLRSLPDNWELMKAAISNSCGKEKLKFADVRDAALGEEIRRKDSGIASTSGTTLNV 220
            A+++L SLP++WE M+ A+SNS GK KLK+ D+RD  LGEE+RR+D+G  S+SG+ LN+
Sbjct: 144 RALIVLASLPNSWEAMRMAVSNSAGKGKLKYNDIRDLILGEEVRRRDAGETSSSGSALNL 203

Query: 221 D-RGRNNNKDHRKG-EKSRNNR--------LECWNCGKTRHLRKNCKAPKKAEGKEAGAN 280
           + RGR  ++++ +G  KSR  R        LECWNCGKT H+RKNC   KK + +   AN
Sbjct: 204 EARGRGKDRNYNRGRSKSRKGRSKSKPGRQLECWNCGKTGHIRKNCWELKK-KNENDSAN 263

Query: 281 VVTEEIHDALVLVVEGAHNTWVVDSGASFHTTGQRDILEDYVAGNHGEMYLADGEPLDII 337
           VVTEE+HDAL+L V+    +WV+DSGASFHTT  R+I+++YVAG+ G++YLAD E LD++
Sbjct: 264 VVTEEVHDALLLSVDSPIESWVLDSGASFHTTAHREIIQNYVAGDFGKVYLADDEALDVV 323

[Close]

BLAST of Moc11g13660 vs. TAIR 10
Match: AT3G29785.1 (unknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 70.9 bits (172), Expect = 2.6e-12
Identity = 38/77 (49.35%), Postives = 52/77 (67.53%), Query Frame = 0


Query: 41  VRILDHLHSKELELPLDKKPNDMEEAKWKKLDRKVLGTIRLTLTKNVQSSVAKETTTMGL 100
           ++I D+L+ K+L  PL KK   M +  W  L R+VL  IRLT++KN+  +VAKE +  GL
Sbjct: 19  MKIEDYLYGKKLHQPLGKKVETMSQDDWNILYRQVLDVIRLTISKNIAHNVAKEKSPDGL 78

Query: 101 MSALSNIYEKPSLNNKV 118
           M  LS+IY+KPS NN V
Sbjct: 79  MKVLSDIYKKPSTNNTV 95

The following BLAST results are available for this feature:

BLAST of Moc11g13660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152845.1	2.3e-103	69.77	uncharacterized protein LOC111020469 [Momordica charantia]	[more]
PON60333.1	4.5e-83	52.48	Zinc finger, CCHC-type [Parasponia andersonii]	[more]
PON63051.1	1.5e-81	52.80	Zinc finger, CCHC-type [Trema orientale]	[more]
CAN81130.1	2.0e-78	50.32	hypothetical protein VITISV_003944 [Vitis vinifera]	[more]
CAN60106.1	3.4e-78	50.32	hypothetical protein VITISV_028182 [Vitis vinifera]	[more]

BLAST of Moc11g13660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	2.5e-28	30.38	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of Moc11g13660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DF43	1.1e-103	69.77	uncharacterized protein LOC111020469 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A2P5CH01	2.2e-83	52.48	Zinc finger, CCHC-type OS=Parasponia andersonii OX=3476 GN=PanWU01x14_153190 PE=...	[more]
A0A2P5CPV0	7.1e-82	52.80	Zinc finger, CCHC-type OS=Trema orientale OX=63057 GN=TorRG33x02_277340 PE=4 SV=...	[more]
A0A2N9IKI1	9.2e-82	53.42	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31378 PE=4 SV=1	[more]
A0A2N9GHK9	9.2e-82	53.42	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26945 PE=4 SV=1	[more]

BLAST of Moc11g13660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G29785.1	2.6e-12	49.35	unknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 241..257 e-value: 0.0053 score: 25.3
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 242..256 score: 9.158235
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 68..206 e-value: 4.1E-29 score: 101.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 347..388
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..237
None	No IPR available	PANTHER	PTHR34676	FAMILY NOT NAMED	coord: 43..325
None	No IPR available	PANTHER	PTHR34676:SF1	ZINC FINGER, CCHC-TYPE, TUBBY C-TERMINAL-LIKE DOMAIN PROTEIN-RELATED	coord: 43..325
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 237..260

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g13660.1	Moc11g13660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding