Moc11g13600 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g13600
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr11: 10058697 .. 10062236 (-)
RNA-Seq Expression	Moc11g13600
Synteny	Moc11g13600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATGGTGGTAGGGTGTCGGAGATCTCTCCATTGGATGCAAATAGTGTTGTTGCGGCTGACAATCAAAGTCAACATTGTTATGTATGGTTCATGGCTTCGTCATCAAGACGTTTTGAATGGTTACCATGCACAAAATTGGAGAGGGCTACCGTCTGTTATCTTTTAGGATGACTCTTTATCTTCATTGCATTCTAGTTTAGAGAACTTACATGGTTCCGGGGCAAGGATGACGAAGCAAAAGGTGGGCGACGATGGAGGTGCGGCAGCAATTTGTTCAAATATCGTTTTGGGATCTATGGAGGTCATCAGACTTAATTGTCTTGAGATCGGTTATCAACGTTATTTTAGGAATTTGCTTGATCCTTCCTTACCTATCATAGTGGAGGATAAGGCAACTTTGGATGCAATTATTTTCCTCCAAATTCTAAATAGGGGTGTCATAATTGTCAATATCCTTCAATTAATTGAAAAATCTCCCCCAAAATCATTAAATGAGACCGTGGATGTTGTGACTTTGGAGAAAAGTTTTGGTGGGCTAGAATTTGTTCATATTCCTTGTTCTTTGAATAGGCAATTTGTTTTATTGGCAAAGTGCAATGATCGTTTCTATGTCCTTTGGGATAATTGTTTCTTTTATGGCTTCTATTTGTGGTGCGTTGTCACCCCTCTTCTGTTTCCTAGCTCTGATATCACCAACGTCCCTACTACAATCCACATTCCTCTACAGTCAATTTCTTCCCCTATCATTCCCTCGTTGAACCTTTCCTCCATCATTTTAACTGACACGACATCCCTTCTAGTTCCTATCTCTTCCTTGCCGACTAATTTGCACCATCCACCACCTGTTCCTTCCATGTTGCCAACAGTCTCTAATACTCATTCGATGCAGACACGTTCCAAGTCTGGTATCTCTAAATGTAAGATGTGCTATTTATCTACTACTTCCAACCCGGATAGTGAACCCAGTTTGTTTACTGCAGTAGCCAAATTTGTTGAATGGCAAGAGGCCATGACTGATGAATTTTCTACCCTACAAAAACAAAGTACTTGGTCTCTAGTTTCTTTACCTCCTGAGAAGAATATCGTTGGTTGCAAATGTGTTTATCGCATCAAACGTCACCCTGATGGATCTGTTGCGCGCTATAAAGCACACTTAGTGGCCAAAGGCTTTCATCAGGAACATGGCATTGACTATGGCGAAATATTTAGCCCAGTTGTCAAGAAACCGACTGTCCGTCTTATTTTGACTCTTTCCAGTACCTTTAGCTGGCCTCTACGACAACTCGATGTAAAAAATACCTTCCTCCATGGCAATCTCACTGAAGAGGTCTATATGACTCAACCACAGAGCTTCATCGATCCAGCATTTCCTCATTATGTGTGCAAACTTCATAAGTCACTTTATGGCCTAAAACAGGCCCCTCGTGTCTGGTTTGAGTGCTTTACAGGGCACATTACTACTACATTTGATTTTACATCATCTTATGCTGATTCATCTTTGTTTGTTCGTTGTGTTGGTAGCTCTATCACCTATCTGCTGCTTTACGTGGATGACATCATTCTCACCGGTAATGATGCTGCTTTTGTCACCCACTTCATCTCCAAACTTCAAACCAGGTTTGACATGACTGACCTTGGTAGGCTCAAATACTTCCTTGGTCTCGAGATTGACTGCCCAGGCAATGACATTCTGGTTACACAGTCTAAGTATGCTCGTGACCTCCTAGTTCGTTTTACTTGGCTGATGCCAAACCATGTTTCACTCATGGTGCTCTCAATATTTCTTTTTCCGCTACACCTGTGTGCTCTATTATTGATGCCCAGTTGTATCGTGAGATGGCCGGTGCGCTTCAATACCCTACATTCTCTCGTCCAAACATTTGTTTTTGCGGTGAATAAAGTTTGCTAGCAGATGCACCATCCAACTAGCAGTGATCTTACTGCAGCCAAACACATTCTCCGATATGTCAAAGGTACCATTAATCAAGGCATTCGCTTCTCGCCAGCTCTCTTTCATTTCAGGCCTTCTCTGACTCAGTTTGGGCTGGTGATGTTTCTGACATCGCTCCACCACTGGATATGTCATATTTTTGGGGTCTAATCCTATCTCCTGGTCGGCTAAGAAACAATCTACTATTACTCGCTCTTCTACTAAAGCTGAATATCGTGCATTGGCTGCCACCGCTGCTGAGTTGTCATTGCTTCGCCAACTACGTAAGGATCTTCACATCTTTCTCTCTATCGTCCCAACACTTTAGTGTGACAACCAGTCCTCCATCTGCCTGGCATCAAATCCAGTCTTTCACGCCCGTACCAAACATGTTGAAATTGACTTTCACTTTGTTCATGAACGAGTGGCTCATAAGGATCTCAACCTTCAATACATTCCTACCGAACAACAACTTGCGGACTTATTCACAAAGGCTCACACCATAGATCGATTTCGGTATTTATCCTCCAAACTTTTGTCTCCTTCAAAGGTGTCATAAGTTTGCGAGGCATGTTAAGTGTATCTCAACAACTTCTTAACAACAACTTATCCCTCGTAACCTTTACCTGTATACCTAAGATCATGTAAAACAGTTGTATTTCGTGTACTCTTAAACCTTCTCAAATGGTACAATTTATTTTTAATGCAATGTTTCTTTGATATAAAAAAAAATGTTTTGGTTCAAGATATAACCTTAATCAGTTAACCATGCCCAGTTGACAGATGGTTGGACATTCAAACCTTGTTTACTTAGCTGAAATTGGAATGCGAATGAATTGAAATATTATTAAATTTTATTATTCTAATATTTAATAATAATGAAGTCTATTTTTAAAAATTTGTTGATATTAATTAATAATAACAAACTAAAATTTAAAATTTAAATATAAATTTATAATATTTTATAATAAAATCTCATCCACTCATAGAAATTGTAGAATTTTTTTTTGAAGAAAAATTACTAGTAGTATGAATGAAAAAAAATAATAAAAATATAAAACAAGTAAATAAAAAAAGTTACGAGACTTATTAATAGGTGAGAGAAAGGATAAAAGTTATAAAGTAAATATAATAAAATGTGAGAACTATGGAATAACATGTTGGTAAATATATGTTGTATATATAAACTGTGTAATATTGGCAAACAGATACAATGTAACTAGTTACAAACAATACATATACTAACAACTTGATGAACATCAAAACTTGATAAATATTGTTGGAGGCGAATCCTGGCCTGCCACGTGTCATGATAAAAAAGGTGAGTTGGTTAAACGCGCGGACGAAATGGAGAAAGCGGCTCCAAAATACTCAGGTCGGCAGTCAGGGTAGGACCTATAGTGCCGAGCTGAGCTGATACAGAGTCCGTAACAGTGTCCCTTCAGTACCCGACAACACGCCGCGAGAAAGGTGCAGGGAAGGTGTGGGGATCGTTGGCCATAGTTCGTCCAGAACGTTCCGATCTAAATCGTATCCAAGCTCAATCGATTTCAGGCTCAAACATCTGGCGTCGTCTGTGGGGATACGACACATCTAGAAGTTAG

mRNA sequence

ATGGCGGATGGTGGTAGGGTGTCGGAGATCTCTCCATTGGATGCAAATAGTGTTGTTGCGGCTGACAATCAAAGTCAACATTGTTATGTATGGTTCATGGCTTCGTCATCAAGACGTTTTGAATGTTTAGAGAACTTACATGGTTCCGGGGCAAGGATGACGAAGCAAAAGGTGGGCGACGATGGAGGTGCGGCAGCAATTTGTTCAAATATCGTTTTGGGATCTATGGAGGTCATCAGACTTAATTGTCTTGAGATCGGTTATCAACGTTATTTTAGGAATTTGCTTGATCCTTCCTTACCTATCATAGTGGAGGATAAGGCAACTTTGGATGCAATTATTTTCCTCCAAATTCTAAATAGGGGTGTCATAATTGTCAATATCCTTCAATTAATTGAAAAATCTCCCCCAAAATCATTAAATGAGACCGTGGATGTTGTGACTTTGGAGAAAAGTTTTGGTGGGCTAGAATTTGTTCATATTCCTTGTTCTTTGAATAGGCAATTTGTTTTATTGGCAAAGTGCAATGATCGTTTCTATGTCCTTTGGGATAATTGTTTCTTTTATGGCTTCTATTTGTGGTGCGTTGTCACCCCTCTTCTGTTTCCTAGCTCTGATATCACCAACGTCCCTACTACAATCCACATTCCTCTACAGTCAATTTCTTCCCCTATCATTCCCTCGTTGAACCTTTCCTCCATCATTTTAACTGACACGACATCCCTTCTAGTTCCTATCTCTTCCTTGCCGACTAATTTGCACCATCCACCACCTGTTCCTTCCATGTTGCCAACAGTCTCTAATACTCATTCGATGCAGACACGTTCCAAGTCTGGTATCTCTAAATTGTCCCTTCAGTACCCGACAACACGCCGCGAGAAAGGTGCAGGGAAGGTGTGGGGATCGTTGGCCATAGTTCGTCCAGAACGTTCCGATCTAAATCGTATCCAAGCTCAATCGATTTCAGGCTCAAACATCTGGCGTCGTCTGTGGGGATACGACACATCTAGAAGTTAG

Coding sequence (CDS)

ATGGCGGATGGTGGTAGGGTGTCGGAGATCTCTCCATTGGATGCAAATAGTGTTGTTGCGGCTGACAATCAAAGTCAACATTGTTATGTATGGTTCATGGCTTCGTCATCAAGACGTTTTGAATGTTTAGAGAACTTACATGGTTCCGGGGCAAGGATGACGAAGCAAAAGGTGGGCGACGATGGAGGTGCGGCAGCAATTTGTTCAAATATCGTTTTGGGATCTATGGAGGTCATCAGACTTAATTGTCTTGAGATCGGTTATCAACGTTATTTTAGGAATTTGCTTGATCCTTCCTTACCTATCATAGTGGAGGATAAGGCAACTTTGGATGCAATTATTTTCCTCCAAATTCTAAATAGGGGTGTCATAATTGTCAATATCCTTCAATTAATTGAAAAATCTCCCCCAAAATCATTAAATGAGACCGTGGATGTTGTGACTTTGGAGAAAAGTTTTGGTGGGCTAGAATTTGTTCATATTCCTTGTTCTTTGAATAGGCAATTTGTTTTATTGGCAAAGTGCAATGATCGTTTCTATGTCCTTTGGGATAATTGTTTCTTTTATGGCTTCTATTTGTGGTGCGTTGTCACCCCTCTTCTGTTTCCTAGCTCTGATATCACCAACGTCCCTACTACAATCCACATTCCTCTACAGTCAATTTCTTCCCCTATCATTCCCTCGTTGAACCTTTCCTCCATCATTTTAACTGACACGACATCCCTTCTAGTTCCTATCTCTTCCTTGCCGACTAATTTGCACCATCCACCACCTGTTCCTTCCATGTTGCCAACAGTCTCTAATACTCATTCGATGCAGACACGTTCCAAGTCTGGTATCTCTAAATTGTCCCTTCAGTACCCGACAACACGCCGCGAGAAAGGTGCAGGGAAGGTGTGGGGATCGTTGGCCATAGTTCGTCCAGAACGTTCCGATCTAAATCGTATCCAAGCTCAATCGATTTCAGGCTCAAACATCTGGCGTCGTCTGTGGGGATACGACACATCTAGAAGTTAG

Protein sequence

MADGGRVSEISPLDANSVVAADNQSQHCYVWFMASSSRRFECLENLHGSGARMTKQKVGDDGGAAAICSNIVLGSMEVIRLNCLEIGYQRYFRNLLDPSLPIIVEDKATLDAIIFLQILNRGVIIVNILQLIEKSPPKSLNETVDVVTLEKSFGGLEFVHIPCSLNRQFVLLAKCNDRFYVLWDNCFFYGFYLWCVVTPLLFPSSDITNVPTTIHIPLQSISSPIIPSLNLSSIILTDTTSLLVPISSLPTNLHHPPPVPSMLPTVSNTHSMQTRSKSGISKLSLQYPTTRREKGAGKVWGSLAIVRPERSDLNRIQAQSISGSNIWRRLWGYDTSRS

Homology

[Close]

BLAST of Moc11g13600 vs. NCBI nr
Match: XP_022159860.1 (uncharacterized protein LOC111026150 [Momordica charantia])

HSP 1 Score: 107.1 bits (266), Expect = 3.1e-19
Identity = 62/115 (53.91%), Postives = 73/115 (63.48%), Query Frame = 0


Query: 1   MADGGRVSEISPLDANSVVAADNQSQHCYVWFMASSSRRFECLENLHGSG-ARMTKQKVG 60
           MAD   +SEISPLDANS V  D    +  ++      R  + L++ H     RM +QKVG
Sbjct: 1   MADSDWMSEISPLDANSAVVVDKIKANIVMY--GPWHRHHDVLKSYHAQNWTRMMEQKVG 60

Query: 61  DDGGAAAICSNIVLGSMEVIRLNCLEIGYQRYFRNLLDPSLPIIVEDKATLDAII 115
           DDGGAA I SN VLGS+EVI LNCLEI  Q  F NL +PSLP+ VEDK T D II
Sbjct: 61  DDGGAATIKSNTVLGSVEVINLNCLEIPCQHDFGNLSNPSLPVTVEDKTTFDTII 113

[Close]

BLAST of Moc11g13600 vs. ExPASy TrEMBL
Match: A0A6J1DZZ2 (uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026150 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.5e-19
Identity = 62/115 (53.91%), Postives = 73/115 (63.48%), Query Frame = 0


Query: 1   MADGGRVSEISPLDANSVVAADNQSQHCYVWFMASSSRRFECLENLHGSG-ARMTKQKVG 60
           MAD   +SEISPLDANS V  D    +  ++      R  + L++ H     RM +QKVG
Sbjct: 1   MADSDWMSEISPLDANSAVVVDKIKANIVMY--GPWHRHHDVLKSYHAQNWTRMMEQKVG 60

Query: 61  DDGGAAAICSNIVLGSMEVIRLNCLEIGYQRYFRNLLDPSLPIIVEDKATLDAII 115
           DDGGAA I SN VLGS+EVI LNCLEI  Q  F NL +PSLP+ VEDK T D II
Sbjct: 61  DDGGAATIKSNTVLGSVEVINLNCLEIPCQHDFGNLSNPSLPVTVEDKTTFDTII 113

The following BLAST results are available for this feature:

BLAST of Moc11g13600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159860.1	3.1e-19	53.91	uncharacterized protein LOC111026150 [Momordica charantia]	[more]

BLAST of Moc11g13600 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g13600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZZ2	1.5e-19	53.91	uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026...	[more]

BLAST of Moc11g13600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g13600.1	Moc11g13600.1	mRNA