Moc11g13150 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g13150
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	CCHC-type domain-containing protein
Location	chr11: 9738214 .. 9740105 (-)
RNA-Seq Expression	Moc11g13150
Synteny	Moc11g13150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGAGCACATCAACACGTTGAATACTCTATTTTCTCAACTCACATCATTGGCTTGTAAAATAGAGCCAAATGAACGTGCTGAACTTCTACTTCAAAGTCTTCCTGATTCGTATGATCAACTTGTCATCAACCTGACAAATAATATTCTCACCGACTATCTAAACTTTGAAGATATTGAAGTTGCTGTCCTGGAAGAGGAAAATCGACGCAAGAACAAAGTAGATAAGTTGGTGAGTTCACAACAAGCAGAGGATCTAGCGGTGACAAGAGGTAGATCAAAGGAACGTGGCTTAAGTGGGAGCAAAAATCAAGGAAGGGCAAAATCTAGAAGTAAGAAGAACATGAAGTGCTACCACTGTGGTAAGAAGGGACATCTGAAGAAGGATTATTGGAGTCTAGAGAAAGATTCCAATTCTCAAGGAAATGTAGCAAACACTTCAAATGAAGGTGATATCGTGTGTTGTGAAGCAGCGACAACTGTTAGAGGTAGAAAATAGTTTAGCTGACGTGTGGTTCATCGACTCAGGAGCCACTTATCACATAACCTCTCGACGAGAATTGTTCCATCATTATGAACCCGTCTCTTGAGGATCTGTGTTCAGCTGTGAAGATTGTCGGTATTGGAACTATCAAGTTGAAGTTCCATGACAATACAGTTCGCACAATTCAACAAGTGCAACATGTAGAAGGCCTGACAAAGAACTTGTTCTCGGTAGGTCAACTAGATGACCTTGATTGCAAGGTGATCATGGAGAAAGGTATCATGAAGGTGATTCAAGGTGCGCTTACACTTATAAAGGGAAAAAAGGTGGCTACAAACTTGTACATGTTGGAGGGAGAGACTTTGCAAGAAGGAGAAGCATCAGTTGCCTCAAAAAGTCCAAGTGAAAAGTTATCGATGATCTGGCACCAGAAACTTGGACACATGTCCGAACAAGGAATGAAGGTTCTTGCGGAGCAGAATCTACTCCCAAGGCTCACTAAGGTATCTTTACCCTTTTGTGAGCATTGTGTTACAAGTAAACAGCACAGGTTAAAGTTCAACACATCAAATTCTAGAAGTAAAGAGATTCTAGACTTGGTTCACTCTAATGTATGGCAAGCACCGGTTACATCTCTAGGAGGAGCAGGGTACTTCGTGTTCTTTATAGATGACTACTCCAGAAGATGTTGGGTGTATCCTATCAAGAGAAAGGCAGATGTGTGTTCGGTCTTCAAAGTGTTCAAAGCGCAGGTAGAACTTCAATCTGGCAAGAAGTTGAAGTATTTACGGATAGATAGTGGAGGGGAATATACGAGCAATGAGTTTGCGGATTTCTGCAATCAGGAAGGCATCAAGAGGCAGTTCACTACGGCTTACACTCCTCAGCAAAATGGAGTAGCAGAGCGGATGAACAAAACATTGTTGGAGAGGACAAAAGCAATGTTAGCAGCTGTAGGCTTAGACAAAGCTTTTTGGACAAAAGCAATTAATACCGCCTGTTATGTAGTGAATCGTGTTCCATCAACCGCAATTGACTTGAAAACACCGATGTAGATGTGGATGGGCAAGCCAGGTGATTATTCAAACCTCTATACATTCGGAAGTCTGGTGTACGTGATATACAATGCCCAAGAATCTACAAAGCTGGATCCAAAATCCAGGAAATGTTTATACTTGGGGTATGCTAATGGTGTGAAGGGATATAGCTTGTGGGATCCCACTGCCCACAAGGTTATCATCAGCAGGGATGTGATCTTTATGGAGGACAAGAAACAAGCTGTAGAAGATGATAACACTGTAAATAAAAGTTCAGAGACTACAACAGTATACGTGGAGAAAGAATCTGAAAAGGACTCTTCTAAAGCTAAATCAGCGCACGAGATCCAAGAACCAGAAGAATCATAA

mRNA sequence

ATGACAGAGCACATCAACACGTTGAATACTCTATTTTCTCAACTCACATCATTGGCTTGTAAAATAGAGCCAAATGAACGTGCTGAACTTCTACTTCAAAGTCTTCCTGATTCGTATGATCAACTTGTCATCAACCTGACAAATAATATTCTCACCGACTATCTAAACTTTGAAGATATTGAAGTTGCTGTCCTGGAAGAGGAAAATCGACGCAAGAACAAAGTAGATAAGTTGGTGAGTTCACAACAAGCAGAGGATCTAGCGGTGACAAGAGGTAGATCAAAGGAACGTGGCTTAAGTGGGAGCAAAAATCAAGGAAGGGCAAAATCTAGAAGTAAGAAGAACATGAAGTGCTACCACTGTGGTAAGAAGGGACATCTGAAGAAGGATTATTGGAGTCTAGAGAAAGATTCCAATTCTCAAGGAAATGTAGCAAACACTTCAAATGAAGGTGATATCGTGTGTTGTGAAGCAGCGACAACTGTTAGAGCTGTGAAGATTGTCGGTATTGGAACTATCAAGTTGAAGTTCCATGACAATACAGTTCGCACAATTCAACAAGTGCAACATGTAGAAGGCCTGACAAAGAACTTGTTCTCGGTAGGTCAACTAGATGACCTTGATTGCAAGGTGATCATGGAGAAAGGTATCATGAAGGTGATTCAAGAAGATGATAACACTGTAAATAAAAGTTCAGAGACTACAACAGTATACGTGGAGAAAGAATCTGAAAAGGACTCTTCTAAAGCTAAATCAGCGCACGAGATCCAAGAACCAGAAGAATCATAA

Coding sequence (CDS)

ATGACAGAGCACATCAACACGTTGAATACTCTATTTTCTCAACTCACATCATTGGCTTGTAAAATAGAGCCAAATGAACGTGCTGAACTTCTACTTCAAAGTCTTCCTGATTCGTATGATCAACTTGTCATCAACCTGACAAATAATATTCTCACCGACTATCTAAACTTTGAAGATATTGAAGTTGCTGTCCTGGAAGAGGAAAATCGACGCAAGAACAAAGTAGATAAGTTGGTGAGTTCACAACAAGCAGAGGATCTAGCGGTGACAAGAGGTAGATCAAAGGAACGTGGCTTAAGTGGGAGCAAAAATCAAGGAAGGGCAAAATCTAGAAGTAAGAAGAACATGAAGTGCTACCACTGTGGTAAGAAGGGACATCTGAAGAAGGATTATTGGAGTCTAGAGAAAGATTCCAATTCTCAAGGAAATGTAGCAAACACTTCAAATGAAGGTGATATCGTGTGTTGTGAAGCAGCGACAACTGTTAGAGCTGTGAAGATTGTCGGTATTGGAACTATCAAGTTGAAGTTCCATGACAATACAGTTCGCACAATTCAACAAGTGCAACATGTAGAAGGCCTGACAAAGAACTTGTTCTCGGTAGGTCAACTAGATGACCTTGATTGCAAGGTGATCATGGAGAAAGGTATCATGAAGGTGATTCAAGAAGATGATAACACTGTAAATAAAAGTTCAGAGACTACAACAGTATACGTGGAGAAAGAATCTGAAAAGGACTCTTCTAAAGCTAAATCAGCGCACGAGATCCAAGAACCAGAAGAATCATAA

Protein sequence

MTEHINTLNTLFSQLTSLACKIEPNERAELLLQSLPDSYDQLVINLTNNILTDYLNFEDIEVAVLEEENRRKNKVDKLVSSQQAEDLAVTRGRSKERGLSGSKNQGRAKSRSKKNMKCYHCGKKGHLKKDYWSLEKDSNSQGNVANTSNEGDIVCCEAATTVRAVKIVGIGTIKLKFHDNTVRTIQQVQHVEGLTKNLFSVGQLDDLDCKVIMEKGIMKVIQEDDNTVNKSSETTTVYVEKESEKDSSKAKSAHEIQEPEES

Homology

[Close]

BLAST of Moc11g13150 vs. NCBI nr
Match: KAE8725385.1 (Desiccation-related protein PCC13-62 [Hibiscus syriacus])

HSP 1 Score: 264.2 bits (674), Expect = 1.2e-66
Identity = 150/266 (56.39%), Postives = 180/266 (67.67%), Query Frame = 0


Query: 1   MTEHINTLNTLFSQLTSLACKIEPNERAELLLQSLPDSYDQLVINLTN-NILTDYLNFED 60
           +TEH+NTLNTLFSQLTSL+CKI   ERAELLLQSLPDSYDQL+INLTN N+++  L F+D
Sbjct: 500 VTEHLNTLNTLFSQLTSLSCKIGEQERAELLLQSLPDSYDQLIINLTNSNVIS--LVFDD 559

Query: 61  IEVAVLEEENRRKNKVDKLVSSQQAEDLAVTRGRSKERGLSGSKNQGRAKSRSKKNMKCY 120
           +  AVL+EENRRKNK DK V+ QQAE L  TRGRS ERG S S   GR+KSRSKKN+KCY
Sbjct: 560 VAAAVLQEENRRKNKEDKQVNLQQAEALTTTRGRSTERGQSSSHKHGRSKSRSKKNLKCY 619

Query: 121 HCGKKGHLKKDYWSLEKDSNSQGNVANTSNEGDIVCCEAATTV----------------- 180
           HCGKKGHLKKD WSL K+SN QGN ANTS++GD +CCEA+TTV                 
Sbjct: 620 HCGKKGHLKKDCWSLNKNSNPQGNTANTSDDGDALCCEASTTVEGRKRFADIWLIDSGAT 679

Query: 181 --------------------------RAVKIVGIGTIKLKFHDNTVRTIQQVQHVEGLTK 223
                                      A+ IVG+GTIKLK +D T++ ++ V+HV+GL K
Sbjct: 680 YHMTSRREWFHHYEPVSGGSVYSCNDHALDIVGVGTIKLKMYDGTIKVVRDVRHVKGLKK 739

[Close]

BLAST of Moc11g13150 vs. NCBI nr
Match: KAE8731597.1 (hypothetical protein F3Y22_tig00002793pilonHSYRG00074 [Hibiscus syriacus])

HSP 1 Score: 263.5 bits (672), Expect = 2.0e-66
Identity = 140/232 (60.34%), Postives = 175/232 (75.43%), Query Frame = 0


Query: 1   MTEHINTLNTLFSQLTSLACKIEPNERAELLLQSLPDSYDQLVINLTNNILTDYLNFEDI 60
           +TEH+NTLNTLFSQLTSL+CKI   ERAELLLQSLPDSYDQL+INLTN+ +T  L F+D+
Sbjct: 114 VTEHLNTLNTLFSQLTSLSCKIREQERAELLLQSLPDSYDQLIINLTNSNVTS-LVFDDV 173

Query: 61  EVAVLEEENRRKNKVDKLVSSQQAEDLAVTRGRSKERGLSGSKNQGRAKSRSKKNMKCYH 120
             ++L+EENR KNK D+ V+ QQAE L   RGRS ER  S S   GR+KSRSKKN+KCYH
Sbjct: 174 ATSILQEENRCKNKEDRQVNLQQAEALTTMRGRSTERDQSSSHKHGRSKSRSKKNLKCYH 233

Query: 121 CGKKGHLKKDYWSLEKDSNSQGNVANTSNEGDIVCCEAATTV----------RAVKIVGI 180
           CGKKGHLKKD WSL K+SN QGN  NTS++GD +CCEA+TTV           A++I+G+
Sbjct: 234 CGKKGHLKKDCWSLNKNSNPQGNTVNTSDDGDALCCEASTTVEGGSVYSCNDHALEIIGV 293

Query: 181 GTIKLKFHDNTVRTIQQVQHVEGLTKNLFSVGQLDDLDCKVIMEKGIMKVIQ 223
           GTIKLK +D T++ ++ V+HV+GL KNL S   LD+   K+   KGIMK+ +
Sbjct: 294 GTIKLKMYDGTIKVVRDVRHVKGLKKNLLSYRLLDNNASKIEARKGIMKLFR 344

[Close]

BLAST of Moc11g13150 vs. NCBI nr
Match: KAE8686521.1 (Protein STRUBBELIG-RECEPTOR FAMILY 1 [Hibiscus syriacus])

HSP 1 Score: 262.3 bits (669), Expect = 4.4e-66
Identity = 151/284 (53.17%), Postives = 186/284 (65.49%), Query Frame = 0


Query: 1   MTEHINTLNTLFSQLTSLACKIEPNERAELLLQSLPDSYDQLVINLTNNILTDYLNFEDI 60
           +TEH+NTLNTLFSQLTSL+CKI   ERAELLLQSLPDSYDQL+INLTN+ +T  L F+D+
Sbjct: 114 VTEHLNTLNTLFSQLTSLSCKIGEQERAELLLQSLPDSYDQLIINLTNSNVTS-LVFDDV 173

Query: 61  EVAVLEEENRRKNKVDKLVSSQQAEDLAVTRGRSKERGLSGSKNQGRAKSRSKKNMKCYH 120
             AVL+EENRRKNK D+ V+ QQAE L  TRGRS ERG S S   GR+KSRSKKN+KCYH
Sbjct: 174 AAAVLQEENRRKNKEDRQVNLQQAEALTTTRGRSTERGQSSSHKYGRSKSRSKKNLKCYH 233

Query: 121 CGKKGHLKKDYWSLEKDSNSQGNVANTSNEGDIVCCEAATTVR----------------- 180
           CGKKGHLKKD WSL K+SN QGN ANTS++GD +CCEA+TTV+                 
Sbjct: 234 CGKKGHLKKDCWSLNKNSNPQGNTANTSDDGDALCCEASTTVKGRKRFADIWLIDSGATY 293

Query: 181 --------------------------AVKIVGIGTIKLKFHDNTVRTIQQVQHVEGLTKN 240
                                     A++I+G+GTIKLK +D T++ ++ V+HV+GL KN
Sbjct: 294 YMTSRREWFHHYEPVSGGSVYSCNDHALEIIGVGTIKLKMYDGTIKVVRDVRHVKGLKKN 353

Query: 241 LFSVGQLDDLDCKVIMEKGIMKVIQEDDNTVNKSSETTTVYVEK 242
           L S G LD+   K+   KGIMKV       +     T  +Y+ K
Sbjct: 354 LLSYGLLDNNASKIETRKGIMKVFHGALVVLKGEKITANLYMLK 396

[Close]

BLAST of Moc11g13150 vs. NCBI nr
Match: BAD34493.1 (Gag-Pol [Ipomoea batatas])

HSP 1 Score: 260.0 bits (663), Expect = 2.2e-65
Identity = 147/265 (55.47%), Postives = 182/265 (68.68%), Query Frame = 0


Query: 1   MTEHINTLNTLFSQLTSLACKIEPNERAELLLQSLPDSYDQLVINLTNNILTDYLNFEDI 60
           +TEH+NTLNTLFSQLTSL+CKIEP ERAELLLQSLPDSYDQL+INLTNNILTDYL F+D+
Sbjct: 114 VTEHLNTLNTLFSQLTSLSCKIEPQERAELLLQSLPDSYDQLIINLTNNILTDYLVFDDV 173

Query: 61  EVAVLEEENRRKNKVDKLVSSQQAEDLAVTRGRSKERGLSGSKNQGRAKSRSKKNMKCYH 120
             AVLEEE+RRKNK D+ V+ QQAE L V RGRS ERG S  +  GR+KS SKKN+ CY+
Sbjct: 174 AAAVLEEESRRKNKEDRQVNLQQAEALTVMRGRSTERGQSSGR--GRSKS-SKKNLTCYN 233

Query: 121 CGKKGHLKKDYWSLEKDSNSQGNVANTSNEGDIVCCEAATT------------------- 180
           CGKKGHLKKD W+L ++SN QGNVA+TS++G  +CCEA+                     
Sbjct: 234 CGKKGHLKKDCWNLAQNSNPQGNVASTSDDGSALCCEASIAREGRKRFADIWLIDSGATY 293

Query: 181 ------------------------VRAVKIVGIGTIKLKFHDNTVRTIQQVQHVEGLTKN 223
                                     A++I+GIGTIKLK +D TV+T+Q V+HV+GL KN
Sbjct: 294 HMTSRKEWFHHYEPISGGSVYSCDDHALEIIGIGTIKLKMYDGTVQTVQDVRHVKGLKKN 353

[Close]

BLAST of Moc11g13150 vs. NCBI nr
Match: KAE8703505.1 (hypothetical protein F3Y22_tig00110469pilonHSYRG00245 [Hibiscus syriacus])

HSP 1 Score: 258.8 bits (660), Expect = 4.9e-65
Identity = 145/265 (54.72%), Postives = 177/265 (66.79%), Query Frame = 0


Query: 1   MTEHINTLNTLFSQLTSLACKIEPNERAELLLQSLPDSYDQLVINLTNNILTDYLNFEDI 60
           +TEH+NTLNTLFSQLTSL+CKI   ER EL+LQSLPDSYDQL+INLTNN +T  L F+D+
Sbjct: 114 VTEHLNTLNTLFSQLTSLSCKIGEQERDELILQSLPDSYDQLIINLTNNNVTS-LVFDDV 173

Query: 61  EVAVLEEENRRKNKVDKLVSSQQAEDLAVTRGRSKERGLSGSKNQGRAKSRSKKNMKCYH 120
             AVL+EENRRKNK DK ++ QQAE L  TRGRS ER  S S   GR+KS SKKN+KCY+
Sbjct: 174 AAAVLQEENRRKNKEDKQINLQQAEALTTTRGRSTERDQSSSHKHGRSKSMSKKNLKCYN 233

Query: 121 CGKKGHLKKDYWSLEKDSNSQGNVANTSNEGDIVCCEAATTV------------------ 180
           CGKKGHLKKDYWSL K+ N QGN ANTS++GD +CCEA+TTV                  
Sbjct: 234 CGKKGHLKKDYWSLNKNFNPQGNTANTSDDGDALCCEASTTVEGRKRFAYIWLIDSGATY 293

Query: 181 -------------------------RAVKIVGIGTIKLKFHDNTVRTIQQVQHVEGLTKN 223
                                     A++IVG+GTIKLK +D T++ ++ V+HV+GL KN
Sbjct: 294 YMTSRREWFHHYEPVSEGSVYSCNDHALEIVGVGTIKLKMYDGTIKVVRDVRHVKGLKKN 353

[Close]

BLAST of Moc11g13150 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.1e-10
Identity = 76/259 (29.34%), Postives = 108/259 (41.70%), Query Frame = 0


Query: 4   HINTLNTLFSQLTSLACKIEPNERAELLLQSLPDSYDQLVINLTNNILTDYLNFEDIEVA 63
           H+N  N L +QL +L  KIE  ++A LLL SLP SYD L   + +   T  +  +D+  A
Sbjct: 121 HLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTT--IELKDVTSA 180

Query: 64  VLEEENRRKNKVDKLVSSQQAEDLAVTRGRSKER-----GLSGSKNQGRAKSRSKKNMK- 123
           +L  E  RK        +Q    +   RGRS +R     G SG++  G++K+RSK  ++ 
Sbjct: 181 LLLNEKMRKKP-----ENQGQALITEGRGRSYQRSSNNYGRSGAR--GKSKNRSKSRVRN 240

Query: 124 CYHCGKKGHLKKDYWSLEK----------DSNSQGNVANTSN------------------ 183
           CY+C + GH K+D  +  K          D N+   V N  N                  
Sbjct: 241 CYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPE 300

Query: 184 ---EGDIVCCEAATTVRAV--------------------KIVGIGTIKLKFHDNTVRTIQ 206
                D      AT VR +                    KI GIG I +K +      ++
Sbjct: 301 SEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLK 360

[Close]

BLAST of Moc11g13150 vs. ExPASy TrEMBL
Match: A0A6A3C800 (Desiccation-related protein PCC13-62 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00008864pilonHSYRG00005 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 5.7e-67
Identity = 150/266 (56.39%), Postives = 180/266 (67.67%), Query Frame = 0


Query: 1   MTEHINTLNTLFSQLTSLACKIEPNERAELLLQSLPDSYDQLVINLTN-NILTDYLNFED 60
           +TEH+NTLNTLFSQLTSL+CKI   ERAELLLQSLPDSYDQL+INLTN N+++  L F+D
Sbjct: 500 VTEHLNTLNTLFSQLTSLSCKIGEQERAELLLQSLPDSYDQLIINLTNSNVIS--LVFDD 559

Query: 61  IEVAVLEEENRRKNKVDKLVSSQQAEDLAVTRGRSKERGLSGSKNQGRAKSRSKKNMKCY 120
           +  AVL+EENRRKNK DK V+ QQAE L  TRGRS ERG S S   GR+KSRSKKN+KCY
Sbjct: 560 VAAAVLQEENRRKNKEDKQVNLQQAEALTTTRGRSTERGQSSSHKHGRSKSRSKKNLKCY 619

Query: 121 HCGKKGHLKKDYWSLEKDSNSQGNVANTSNEGDIVCCEAATTV----------------- 180
           HCGKKGHLKKD WSL K+SN QGN ANTS++GD +CCEA+TTV                 
Sbjct: 620 HCGKKGHLKKDCWSLNKNSNPQGNTANTSDDGDALCCEASTTVEGRKRFADIWLIDSGAT 679

Query: 181 --------------------------RAVKIVGIGTIKLKFHDNTVRTIQQVQHVEGLTK 223
                                      A+ IVG+GTIKLK +D T++ ++ V+HV+GL K
Sbjct: 680 YHMTSRREWFHHYEPVSGGSVYSCNDHALDIVGVGTIKLKMYDGTIKVVRDVRHVKGLKK 739

[Close]

BLAST of Moc11g13150 vs. ExPASy TrEMBL
Match: A0A6A3CSP3 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00002793pilonHSYRG00074 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 9.7e-67
Identity = 140/232 (60.34%), Postives = 175/232 (75.43%), Query Frame = 0


Query: 1   MTEHINTLNTLFSQLTSLACKIEPNERAELLLQSLPDSYDQLVINLTNNILTDYLNFEDI 60
           +TEH+NTLNTLFSQLTSL+CKI   ERAELLLQSLPDSYDQL+INLTN+ +T  L F+D+
Sbjct: 114 VTEHLNTLNTLFSQLTSLSCKIREQERAELLLQSLPDSYDQLIINLTNSNVTS-LVFDDV 173

Query: 61  EVAVLEEENRRKNKVDKLVSSQQAEDLAVTRGRSKERGLSGSKNQGRAKSRSKKNMKCYH 120
             ++L+EENR KNK D+ V+ QQAE L   RGRS ER  S S   GR+KSRSKKN+KCYH
Sbjct: 174 ATSILQEENRCKNKEDRQVNLQQAEALTTMRGRSTERDQSSSHKHGRSKSRSKKNLKCYH 233

Query: 121 CGKKGHLKKDYWSLEKDSNSQGNVANTSNEGDIVCCEAATTV----------RAVKIVGI 180
           CGKKGHLKKD WSL K+SN QGN  NTS++GD +CCEA+TTV           A++I+G+
Sbjct: 234 CGKKGHLKKDCWSLNKNSNPQGNTVNTSDDGDALCCEASTTVEGGSVYSCNDHALEIIGV 293

Query: 181 GTIKLKFHDNTVRTIQQVQHVEGLTKNLFSVGQLDDLDCKVIMEKGIMKVIQ 223
           GTIKLK +D T++ ++ V+HV+GL KNL S   LD+   K+   KGIMK+ +
Sbjct: 294 GTIKLKMYDGTIKVVRDVRHVKGLKKNLLSYRLLDNNASKIEARKGIMKLFR 344

[Close]

BLAST of Moc11g13150 vs. ExPASy TrEMBL
Match: A0A6A2Z3I3 (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111059pilonHSYRG00161 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 2.2e-66
Identity = 151/284 (53.17%), Postives = 186/284 (65.49%), Query Frame = 0


Query: 1   MTEHINTLNTLFSQLTSLACKIEPNERAELLLQSLPDSYDQLVINLTNNILTDYLNFEDI 60
           +TEH+NTLNTLFSQLTSL+CKI   ERAELLLQSLPDSYDQL+INLTN+ +T  L F+D+
Sbjct: 114 VTEHLNTLNTLFSQLTSLSCKIGEQERAELLLQSLPDSYDQLIINLTNSNVTS-LVFDDV 173

Query: 61  EVAVLEEENRRKNKVDKLVSSQQAEDLAVTRGRSKERGLSGSKNQGRAKSRSKKNMKCYH 120
             AVL+EENRRKNK D+ V+ QQAE L  TRGRS ERG S S   GR+KSRSKKN+KCYH
Sbjct: 174 AAAVLQEENRRKNKEDRQVNLQQAEALTTTRGRSTERGQSSSHKYGRSKSRSKKNLKCYH 233

Query: 121 CGKKGHLKKDYWSLEKDSNSQGNVANTSNEGDIVCCEAATTVR----------------- 180
           CGKKGHLKKD WSL K+SN QGN ANTS++GD +CCEA+TTV+                 
Sbjct: 234 CGKKGHLKKDCWSLNKNSNPQGNTANTSDDGDALCCEASTTVKGRKRFADIWLIDSGATY 293

Query: 181 --------------------------AVKIVGIGTIKLKFHDNTVRTIQQVQHVEGLTKN 240
                                     A++I+G+GTIKLK +D T++ ++ V+HV+GL KN
Sbjct: 294 YMTSRREWFHHYEPVSGGSVYSCNDHALEIIGVGTIKLKMYDGTIKVVRDVRHVKGLKKN 353

Query: 241 LFSVGQLDDLDCKVIMEKGIMKVIQEDDNTVNKSSETTTVYVEK 242
           L S G LD+   K+   KGIMKV       +     T  +Y+ K
Sbjct: 354 LLSYGLLDNNASKIETRKGIMKVFHGALVVLKGEKITANLYMLK 396

[Close]

BLAST of Moc11g13150 vs. ExPASy TrEMBL
Match: Q6BCY1 (Gag-Pol OS=Ipomoea batatas OX=4120 GN=Rtsp-1AA PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 1.1e-65
Identity = 147/265 (55.47%), Postives = 182/265 (68.68%), Query Frame = 0


Query: 1   MTEHINTLNTLFSQLTSLACKIEPNERAELLLQSLPDSYDQLVINLTNNILTDYLNFEDI 60
           +TEH+NTLNTLFSQLTSL+CKIEP ERAELLLQSLPDSYDQL+INLTNNILTDYL F+D+
Sbjct: 114 VTEHLNTLNTLFSQLTSLSCKIEPQERAELLLQSLPDSYDQLIINLTNNILTDYLVFDDV 173

Query: 61  EVAVLEEENRRKNKVDKLVSSQQAEDLAVTRGRSKERGLSGSKNQGRAKSRSKKNMKCYH 120
             AVLEEE+RRKNK D+ V+ QQAE L V RGRS ERG S  +  GR+KS SKKN+ CY+
Sbjct: 174 AAAVLEEESRRKNKEDRQVNLQQAEALTVMRGRSTERGQSSGR--GRSKS-SKKNLTCYN 233

Query: 121 CGKKGHLKKDYWSLEKDSNSQGNVANTSNEGDIVCCEAATT------------------- 180
           CGKKGHLKKD W+L ++SN QGNVA+TS++G  +CCEA+                     
Sbjct: 234 CGKKGHLKKDCWNLAQNSNPQGNVASTSDDGSALCCEASIAREGRKRFADIWLIDSGATY 293

Query: 181 ------------------------VRAVKIVGIGTIKLKFHDNTVRTIQQVQHVEGLTKN 223
                                     A++I+GIGTIKLK +D TV+T+Q V+HV+GL KN
Sbjct: 294 HMTSRKEWFHHYEPISGGSVYSCDDHALEIIGIGTIKLKMYDGTVQTVQDVRHVKGLKKN 353

[Close]

BLAST of Moc11g13150 vs. ExPASy TrEMBL
Match: A0A6A3AJS1 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110469pilonHSYRG00245 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 2.4e-65
Identity = 145/265 (54.72%), Postives = 177/265 (66.79%), Query Frame = 0


Query: 1   MTEHINTLNTLFSQLTSLACKIEPNERAELLLQSLPDSYDQLVINLTNNILTDYLNFEDI 60
           +TEH+NTLNTLFSQLTSL+CKI   ER EL+LQSLPDSYDQL+INLTNN +T  L F+D+
Sbjct: 114 VTEHLNTLNTLFSQLTSLSCKIGEQERDELILQSLPDSYDQLIINLTNNNVTS-LVFDDV 173

Query: 61  EVAVLEEENRRKNKVDKLVSSQQAEDLAVTRGRSKERGLSGSKNQGRAKSRSKKNMKCYH 120
             AVL+EENRRKNK DK ++ QQAE L  TRGRS ER  S S   GR+KS SKKN+KCY+
Sbjct: 174 AAAVLQEENRRKNKEDKQINLQQAEALTTTRGRSTERDQSSSHKHGRSKSMSKKNLKCYN 233

Query: 121 CGKKGHLKKDYWSLEKDSNSQGNVANTSNEGDIVCCEAATTV------------------ 180
           CGKKGHLKKDYWSL K+ N QGN ANTS++GD +CCEA+TTV                  
Sbjct: 234 CGKKGHLKKDYWSLNKNFNPQGNTANTSDDGDALCCEASTTVEGRKRFAYIWLIDSGATY 293

Query: 181 -------------------------RAVKIVGIGTIKLKFHDNTVRTIQQVQHVEGLTKN 223
                                     A++IVG+GTIKLK +D T++ ++ V+HV+GL KN
Sbjct: 294 YMTSRREWFHHYEPVSEGSVYSCNDHALEIVGVGTIKLKMYDGTIKVVRDVRHVKGLKKN 353

The following BLAST results are available for this feature:

BLAST of Moc11g13150 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8725385.1	1.2e-66	56.39	Desiccation-related protein PCC13-62 [Hibiscus syriacus]	[more]
KAE8731597.1	2.0e-66	60.34	hypothetical protein F3Y22_tig00002793pilonHSYRG00074 [Hibiscus syriacus]	[more]
KAE8686521.1	4.4e-66	53.17	Protein STRUBBELIG-RECEPTOR FAMILY 1 [Hibiscus syriacus]	[more]
BAD34493.1	2.2e-65	55.47	Gag-Pol [Ipomoea batatas]	[more]
KAE8703505.1	4.9e-65	54.72	hypothetical protein F3Y22_tig00110469pilonHSYRG00245 [Hibiscus syriacus]	[more]

BLAST of Moc11g13150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	2.1e-10	29.34	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of Moc11g13150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A3C800	5.7e-67	56.39	Desiccation-related protein PCC13-62 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig...	[more]
A0A6A3CSP3	9.7e-67	60.34	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00002793pilon...	[more]
A0A6A2Z3I3	2.2e-66	53.17	Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig...	[more]
Q6BCY1	1.1e-65	55.47	Gag-Pol OS=Ipomoea batatas OX=4120 GN=Rtsp-1AA PE=4 SV=1	[more]
A0A6A3AJS1	2.4e-65	54.72	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110469pilon...	[more]

BLAST of Moc11g13150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 65..85
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 1..74 e-value: 2.3E-12 score: 46.8
None	No IPR available	GENE3D	4.10.60.10		coord: 88..146 e-value: 3.9E-7 score: 31.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..262
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..262
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..113
None	No IPR available	PANTHER	PTHR34676	FAMILY NOT NAMED	coord: 1..124
None	No IPR available	PANTHER	PTHR34676:SF6	SUBFAMILY NOT NAMED	coord: 1..124
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 117..130 score: 8.713199
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 102..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g13150.1	Moc11g13150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0050896	response to stimulus
cellular_component	GO:0016020	membrane
molecular_function	GO:0140096	catalytic activity, acting on a protein
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding