Moc11g12590 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g12590
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	RNase H domain-containing protein
Location	chr11: 9306351 .. 9307049 (-)
RNA-Seq Expression	Moc11g12590
Synteny	Moc11g12590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCAATATCTTAAGGGACTGGCGAGACATGTTAAATTGGAAAGATTTTGAGGAATTGGTTGTGTTTTTGTGGAGTTTATGGAATCGTAGAAATGCATTTGTGTTTAATAAGAGAAGAGTTGAGGATGATGATTTGGCGGGATGGGTCAGTACTTACATTGCTACATTCAAGGCTACTAATACCAATCATGCAACAGCCAACCAAGATGTTAGTCAAAGTTTTCAACAATCTTCACAAATACATCAAGCTCAGAATCACACTATTTGGTGCCCAGCAGAAGAGGGGGTCTTTAAATTAAAGACAGATGCTTCTTTTTCCTCTATCGATTTTAATGCAGGTCTGGGAGTCATCATCATCAGAGACCATAGAGGGCAAGTTCTAGCTTCGGCTACGAAATACTTGGAGCATGTGGCGTCCGTGGATGATGCTGAAGCGCTTGCTGCAGTGGAAGGCCTTCGTGTGGCAATGGAGACTGGAATTTCTCCGATCCTTTTGGAAACTGACTCTTTGCGTATCTACAATCTTTTTGCTCGAGATAAAGAAGGCCTATCAAAGACGGGATCAATTATTGAATATGTGAAAACTCATCTTGCTACCAGATTGCAGGTATCCTATAGCTTCACAAAAAGAACTGGAAATACGATCGCTCACCTTTTGGCGAGAAGAGCCCTCCAGTCTCAGGAAAATTTCGTCTAG

mRNA sequence

ATGATCAATATCTTAAGGGACTGGCGAGACATGTTAAATTGGAAAGATTTTGAGGAATTGGTTGTGTTTTTGTGGAGTTTATGGAATCGTAGAAATGCATTTGTGTTTAATAAGAGAAGAGTTGAGGATGATGATTTGGCGGGATGGGTCAGTACTTACATTGCTACATTCAAGGCTACTAATACCAATCATGCAACAGCCAACCAAGATGTTAGTCAAAGTTTTCAACAATCTTCACAAATACATCAAGCTCAGAATCACACTATTTGGTGCCCAGCAGAAGAGGGGGTCTTTAAATTAAAGACAGATGCTTCTTTTTCCTCTATCGATTTTAATGCAGGTCTGGGAGTCATCATCATCAGAGACCATAGAGGGCAAGTTCTAGCTTCGGCTACGAAATACTTGGAGCATGTGGCGTCCGTGGATGATGCTGAAGCGCTTGCTGCAGTGGAAGGCCTTCGTGTGGCAATGGAGACTGGAATTTCTCCGATCCTTTTGGAAACTGACTCTTTGCGTATCTACAATCTTTTTGCTCGAGATAAAGAAGGCCTATCAAAGACGGGATCAATTATTGAATATGTGAAAACTCATCTTGCTACCAGATTGCAGGTATCCTATAGCTTCACAAAAAGAACTGGAAATACGATCGCTCACCTTTTGGCGAGAAGAGCCCTCCAGTCTCAGGAAAATTTCGTCTAG

Coding sequence (CDS)

ATGATCAATATCTTAAGGGACTGGCGAGACATGTTAAATTGGAAAGATTTTGAGGAATTGGTTGTGTTTTTGTGGAGTTTATGGAATCGTAGAAATGCATTTGTGTTTAATAAGAGAAGAGTTGAGGATGATGATTTGGCGGGATGGGTCAGTACTTACATTGCTACATTCAAGGCTACTAATACCAATCATGCAACAGCCAACCAAGATGTTAGTCAAAGTTTTCAACAATCTTCACAAATACATCAAGCTCAGAATCACACTATTTGGTGCCCAGCAGAAGAGGGGGTCTTTAAATTAAAGACAGATGCTTCTTTTTCCTCTATCGATTTTAATGCAGGTCTGGGAGTCATCATCATCAGAGACCATAGAGGGCAAGTTCTAGCTTCGGCTACGAAATACTTGGAGCATGTGGCGTCCGTGGATGATGCTGAAGCGCTTGCTGCAGTGGAAGGCCTTCGTGTGGCAATGGAGACTGGAATTTCTCCGATCCTTTTGGAAACTGACTCTTTGCGTATCTACAATCTTTTTGCTCGAGATAAAGAAGGCCTATCAAAGACGGGATCAATTATTGAATATGTGAAAACTCATCTTGCTACCAGATTGCAGGTATCCTATAGCTTCACAAAAAGAACTGGAAATACGATCGCTCACCTTTTGGCGAGAAGAGCCCTCCAGTCTCAGGAAAATTTCGTCTAG

Protein sequence

MINILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVEDDDLAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKLKTDASFSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLATRLQVSYSFTKRTGNTIAHLLARRALQSQENFV

Homology

[Close]

BLAST of Moc11g12590 vs. NCBI nr
Match: XP_022139684.1 (uncharacterized protein LOC111010533 [Momordica charantia])

HSP 1 Score: 460.7 bits (1184), Expect = 7.5e-126
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 1   MINILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVEDDDLAGWVSTYIATFKAT 60
           MINILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVEDDDLAGWVSTYIATFKAT
Sbjct: 1   MINILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVEDDDLAGWVSTYIATFKAT 60

Query: 61  NTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKLKTDASFSSIDFNAGLGVIII 120
           NTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKLKTDASFSSIDFNAGLGVIII
Sbjct: 61  NTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKLKTDASFSSIDFNAGLGVIII 120

Query: 121 RDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARD 180
           RDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARD
Sbjct: 121 RDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARD 180

Query: 181 KEGLSKTGSIIEYVKTHLATRLQVSYSFTKRTGNTIAHLLARRALQSQENFV 233
           KEGLSKTGSIIEYVKTHLATRLQVSYSFTKRTGNTIAHLLARRALQSQENFV
Sbjct: 181 KEGLSKTGSIIEYVKTHLATRLQVSYSFTKRTGNTIAHLLARRALQSQENFV 232

[Close]

BLAST of Moc11g12590 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 152.1 bits (383), Expect = 5.7e-33
Identity = 95/230 (41.30%), Postives = 128/230 (55.65%), Query Frame = 0


Query: 4    ILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVE----DDDLAGWVSTYIATFKA 63
            ILR+  + L+  DFEEL V +W LWN+RNA  FN           +L  W + Y   F+ 
Sbjct: 914  ILRESHESLSKADFEELCVVIWGLWNQRNARAFNDSTKTVFKIGMELVEWANKYAMEFRE 973

Query: 64   TNTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKLKTDASFSSIDFNAGLGVII 123
              +N  T           +++I       +W P +EG++K+ TDASF + D +AGLG+II
Sbjct: 974  AKSNPITGR------VTNTAEI-------LWQPPDEGIYKINTDASFLASDQHAGLGIII 1033

Query: 124  IRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFAR 183
              D RGQV+A+ATKYLE++ SVD AEA+AAVEGL++A E G+ P L              
Sbjct: 1034 HND-RGQVMAAATKYLENIQSVDMAEAIAAVEGLQLASEIGMHPAL-------------- 1093

Query: 184  DKEGLSKTGSIIEYVKTHLATRLQVSYSFTKRTGNTIAHLLARRALQSQE 230
              E LS+TG I+   K      L  S++F KR GN  AH+LARRAL   E
Sbjct: 1094 --EDLSETGEIVLKAKNFWTQSLHASFNFVKREGNKAAHMLARRALLLHE 1113

[Close]

BLAST of Moc11g12590 vs. NCBI nr
Match: XP_022140628.1 (uncharacterized protein LOC111011237 [Momordica charantia])

HSP 1 Score: 151.4 bits (381), Expect = 9.8e-33
Identity = 83/184 (45.11%), Postives = 119/184 (64.67%), Query Frame = 0


Query: 46  LAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKLKTDAS 105
           L  W + Y+  F+  N+N       V+ + +            +W P ++ ++K+ TDAS
Sbjct: 3   LVEWANKYVMEFREANSNPFPGR--VTNTAE-----------VLWLPPDKRIYKINTDAS 62

Query: 106 FSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPIL 165
           F + D +AGLG IIIR+ RGQV+ASATKYLE++ SVD AEA+ AVEGL++A + G++P++
Sbjct: 63  FLASDQHAGLG-IIIRNDRGQVMASATKYLENIQSVDMAEAIVAVEGLQLASKIGVNPVI 122

Query: 166 LETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLATRLQVSYSFTKRTGNTIAHLLARRAL 225
           LETDS RI+NLF++  E LS+TG I+   K      L  S++F KR GN  AH+LARRAL
Sbjct: 123 LETDSSRIFNLFSQPSEDLSETGEIVLKAKNFWTQSLHASFNFVKREGNKAAHMLARRAL 172

Query: 226 QSQE 230
             +E
Sbjct: 183 LLRE 172

[Close]

BLAST of Moc11g12590 vs. NCBI nr
Match: XP_022135942.1 (uncharacterized protein LOC111007775 [Momordica charantia])

HSP 1 Score: 121.7 bits (304), Expect = 8.3e-24
Identity = 79/227 (34.80%), Postives = 118/227 (51.98%), Query Frame = 0


Query: 10  DMLNWKDFEELVVFLWSLWNRRNAFVF-NKRRVEDDDLAGWVSTYIATFKATNTNHATAN 69
           D + W   EEL VFLW++WN RN  +F N       ++  WV+ Y+              
Sbjct: 2   DRIKWTGLEELSVFLWAIWNARNQSMFTNGHGFLLVNMVDWVADYL-------------- 61

Query: 70  QDVSQSFQQSSQI-----HQAQNHTIWCPAEEGVFKLKTDASFSSIDFNAGLGVIIIRDH 129
             V QS Q+   +      +    + WCP     FK+  DA+F   +F+AGL  I+IRD 
Sbjct: 62  -QVYQSAQEGPSLPLLLDGRGGRVSAWCPPLAPFFKVNVDAAFKKGNFSAGLD-ILIRDS 121

Query: 130 RGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEG 189
              VL SA  ++ HV+ V  AE LAA EG+ +A+E G+ P  +ETDS +++NL   D E 
Sbjct: 122 TVNVLLSAMCFITHVSDVTLAECLAAQEGVCLAIEAGLIPFQIETDSSQVFNLLRTDCED 181

Query: 190 LSKTGSIIEYVKTHLATRLQV--SYSFTKRTGNTIAHLLARRALQSQ 229
            S+ G +   ++ H+ + L +   +SF  R GN+ AH LAR  + S+
Sbjct: 182 ESEIGVLASSIR-HIVSSLHIGGGFSFVNREGNSGAHTLARMGMVSE 211

[Close]

BLAST of Moc11g12590 vs. NCBI nr
Match: XP_022150944.1 (uncharacterized protein LOC111018973 [Momordica charantia])

HSP 1 Score: 120.9 bits (302), Expect = 1.4e-23
Identity = 78/228 (34.21%), Postives = 118/228 (51.75%), Query Frame = 0


Query: 1   MINILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVEDDDLAGWVSTYIATFKAT 60
           M + +R W D+++W+    +VV LW++WN RN      +  +   L G +S  +    + 
Sbjct: 25  MGHFMRVWTDLVSWQHIGAIVVLLWAIWNARN------QTPQHFSLGGSLSDLV----SW 84

Query: 61  NTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKLKTDASFSSIDFNAGLGVIII 120
           + N+    Q   +S   +  + +     IW P    + K+  DA+F    F AG+GV II
Sbjct: 85  SENYLQVYQAAQRSSXSALVVCRPPRVAIWRPPAAPLLKVNVDAAFRKESFVAGVGV-II 144

Query: 121 RDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARD 180
           RD  G V  +A + L   + VD  E  A  EG+ +A+E G     +ETDSLRI+NL   D
Sbjct: 145 RDSTGLVYLTAIRLLARASDVDWVEGFAVYEGILLAVEAGFIRFQIETDSLRIFNLLTTD 204

Query: 181 KEGLSKTGSIIEYVKTHLATRLQ-VSYSFTKRTGNTIAHLLARRALQS 228
               S+ G +   +K  L++  + VS+SFT R GN  AHLLA+ AL S
Sbjct: 205 CVDDSEVGVLCSVIKLFLSSHAERVSFSFTHRNGNAXAHLLAQLALTS 241

[Close]

BLAST of Moc11g12590 vs. ExPASy TrEMBL
Match: A0A6J1CDQ4 (uncharacterized protein LOC111010533 OS=Momordica charantia OX=3673 GN=LOC111010533 PE=4 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 3.6e-126
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 1   MINILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVEDDDLAGWVSTYIATFKAT 60
           MINILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVEDDDLAGWVSTYIATFKAT
Sbjct: 1   MINILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVEDDDLAGWVSTYIATFKAT 60

Query: 61  NTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKLKTDASFSSIDFNAGLGVIII 120
           NTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKLKTDASFSSIDFNAGLGVIII
Sbjct: 61  NTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKLKTDASFSSIDFNAGLGVIII 120

Query: 121 RDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARD 180
           RDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARD
Sbjct: 121 RDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARD 180

Query: 181 KEGLSKTGSIIEYVKTHLATRLQVSYSFTKRTGNTIAHLLARRALQSQENFV 233
           KEGLSKTGSIIEYVKTHLATRLQVSYSFTKRTGNTIAHLLARRALQSQENFV
Sbjct: 181 KEGLSKTGSIIEYVKTHLATRLQVSYSFTKRTGNTIAHLLARRALQSQENFV 232

[Close]

BLAST of Moc11g12590 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.8e-33
Identity = 95/230 (41.30%), Postives = 128/230 (55.65%), Query Frame = 0


Query: 4    ILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVE----DDDLAGWVSTYIATFKA 63
            ILR+  + L+  DFEEL V +W LWN+RNA  FN           +L  W + Y   F+ 
Sbjct: 914  ILRESHESLSKADFEELCVVIWGLWNQRNARAFNDSTKTVFKIGMELVEWANKYAMEFRE 973

Query: 64   TNTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKLKTDASFSSIDFNAGLGVII 123
              +N  T           +++I       +W P +EG++K+ TDASF + D +AGLG+II
Sbjct: 974  AKSNPITGR------VTNTAEI-------LWQPPDEGIYKINTDASFLASDQHAGLGIII 1033

Query: 124  IRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFAR 183
              D RGQV+A+ATKYLE++ SVD AEA+AAVEGL++A E G+ P L              
Sbjct: 1034 HND-RGQVMAAATKYLENIQSVDMAEAIAAVEGLQLASEIGMHPAL-------------- 1093

Query: 184  DKEGLSKTGSIIEYVKTHLATRLQVSYSFTKRTGNTIAHLLARRALQSQE 230
              E LS+TG I+   K      L  S++F KR GN  AH+LARRAL   E
Sbjct: 1094 --EDLSETGEIVLKAKNFWTQSLHASFNFVKREGNKAAHMLARRALLLHE 1113

[Close]

BLAST of Moc11g12590 vs. ExPASy TrEMBL
Match: A0A6J1CIF1 (uncharacterized protein LOC111011237 OS=Momordica charantia OX=3673 GN=LOC111011237 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 4.7e-33
Identity = 83/184 (45.11%), Postives = 119/184 (64.67%), Query Frame = 0


Query: 46  LAGWVSTYIATFKATNTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKLKTDAS 105
           L  W + Y+  F+  N+N       V+ + +            +W P ++ ++K+ TDAS
Sbjct: 3   LVEWANKYVMEFREANSNPFPGR--VTNTAE-----------VLWLPPDKRIYKINTDAS 62

Query: 106 FSSIDFNAGLGVIIIRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPIL 165
           F + D +AGLG IIIR+ RGQV+ASATKYLE++ SVD AEA+ AVEGL++A + G++P++
Sbjct: 63  FLASDQHAGLG-IIIRNDRGQVMASATKYLENIQSVDMAEAIVAVEGLQLASKIGVNPVI 122

Query: 166 LETDSLRIYNLFARDKEGLSKTGSIIEYVKTHLATRLQVSYSFTKRTGNTIAHLLARRAL 225
           LETDS RI+NLF++  E LS+TG I+   K      L  S++F KR GN  AH+LARRAL
Sbjct: 123 LETDSSRIFNLFSQPSEDLSETGEIVLKAKNFWTQSLHASFNFVKREGNKAAHMLARRAL 172

Query: 226 QSQE 230
             +E
Sbjct: 183 LLRE 172

[Close]

BLAST of Moc11g12590 vs. ExPASy TrEMBL
Match: A0A6J1C467 (uncharacterized protein LOC111007775 OS=Momordica charantia OX=3673 GN=LOC111007775 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 4.0e-24
Identity = 79/227 (34.80%), Postives = 118/227 (51.98%), Query Frame = 0


Query: 10  DMLNWKDFEELVVFLWSLWNRRNAFVF-NKRRVEDDDLAGWVSTYIATFKATNTNHATAN 69
           D + W   EEL VFLW++WN RN  +F N       ++  WV+ Y+              
Sbjct: 2   DRIKWTGLEELSVFLWAIWNARNQSMFTNGHGFLLVNMVDWVADYL-------------- 61

Query: 70  QDVSQSFQQSSQI-----HQAQNHTIWCPAEEGVFKLKTDASFSSIDFNAGLGVIIIRDH 129
             V QS Q+   +      +    + WCP     FK+  DA+F   +F+AGL  I+IRD 
Sbjct: 62  -QVYQSAQEGPSLPLLLDGRGGRVSAWCPPLAPFFKVNVDAAFKKGNFSAGLD-ILIRDS 121

Query: 130 RGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEG 189
              VL SA  ++ HV+ V  AE LAA EG+ +A+E G+ P  +ETDS +++NL   D E 
Sbjct: 122 TVNVLLSAMCFITHVSDVTLAECLAAQEGVCLAIEAGLIPFQIETDSSQVFNLLRTDCED 181

Query: 190 LSKTGSIIEYVKTHLATRLQV--SYSFTKRTGNTIAHLLARRALQSQ 229
            S+ G +   ++ H+ + L +   +SF  R GN+ AH LAR  + S+
Sbjct: 182 ESEIGVLASSIR-HIVSSLHIGGGFSFVNREGNSGAHTLARMGMVSE 211

[Close]

BLAST of Moc11g12590 vs. ExPASy TrEMBL
Match: A0A6J1DBJ7 (uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018973 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 6.9e-24
Identity = 78/228 (34.21%), Postives = 118/228 (51.75%), Query Frame = 0


Query: 1   MINILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVEDDDLAGWVSTYIATFKAT 60
           M + +R W D+++W+    +VV LW++WN RN      +  +   L G +S  +    + 
Sbjct: 25  MGHFMRVWTDLVSWQHIGAIVVLLWAIWNARN------QTPQHFSLGGSLSDLV----SW 84

Query: 61  NTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKLKTDASFSSIDFNAGLGVIII 120
           + N+    Q   +S   +  + +     IW P    + K+  DA+F    F AG+GV II
Sbjct: 85  SENYLQVYQAAQRSSXSALVVCRPPRVAIWRPPAAPLLKVNVDAAFRKESFVAGVGV-II 144

Query: 121 RDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARD 180
           RD  G V  +A + L   + VD  E  A  EG+ +A+E G     +ETDSLRI+NL   D
Sbjct: 145 RDSTGLVYLTAIRLLARASDVDWVEGFAVYEGILLAVEAGFIRFQIETDSLRIFNLLTTD 204

Query: 181 KEGLSKTGSIIEYVKTHLATRLQ-VSYSFTKRTGNTIAHLLARRALQS 228
               S+ G +   +K  L++  + VS+SFT R GN  AHLLA+ AL S
Sbjct: 205 CVDDSEVGVLCSVIKLFLSSHAERVSFSFTHRNGNAXAHLLAQLALTS 241

The following BLAST results are available for this feature:

BLAST of Moc11g12590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139684.1	7.5e-126	100.00	uncharacterized protein LOC111010533 [Momordica charantia]	[more]
XP_022150918.1	5.7e-33	41.30	uncharacterized protein LOC111018954 [Momordica charantia]	[more]
XP_022140628.1	9.8e-33	45.11	uncharacterized protein LOC111011237 [Momordica charantia]	[more]
XP_022135942.1	8.3e-24	34.80	uncharacterized protein LOC111007775 [Momordica charantia]	[more]
XP_022150944.1	1.4e-23	34.21	uncharacterized protein LOC111018973 [Momordica charantia]	[more]

BLAST of Moc11g12590 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g12590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CDQ4	3.6e-126	100.00	uncharacterized protein LOC111010533 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6J1DAR4	2.8e-33	41.30	uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1CIF1	4.7e-33	45.11	uncharacterized protein LOC111011237 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A6J1C467	4.0e-24	34.80	uncharacterized protein LOC111007775 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1DBJ7	6.9e-24	34.21	uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of Moc11g12590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 98..231 e-value: 1.9E-14 score: 55.7
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 102..224 e-value: 1.2E-19 score: 70.4
IPR002156	Ribonuclease H domain	PROSITE	PS50879	RNASE_H	coord: 127..226 score: 8.635674
None	No IPR available	PANTHER	PTHR47074:SF25	SUBFAMILY NOT NAMED	coord: 71..226
None	No IPR available	PANTHER	PTHR47074	BNAC02G40300D PROTEIN	coord: 71..226
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 100..222 e-value: 1.43737E-17 score: 73.8876
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 98..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g12590.1	Moc11g12590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity