Moc11g12560 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g12560
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Vesicle transport protein
Location	chr11: 9285827 .. 9287930 (+)
RNA-Seq Expression	Moc11g12560
Synteny	Moc11g12560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAAAATGGCGCAGGGATGGTTCACACAGGGCGGAGGTAGTGGGAGTGATAATCAGCTCAAAACTTCCTCTTCGCTGCTGGCCGATTGGAACTCCTACGCCGCGGAATCACAAGCTGCTGAGGATAGCACCTCCAGTTTGGGAATTGGATTCGATCTCGAAAGTGCTGTTAGGTCCGCTAATGATACCGTTTCAGGAACTTTCAGCGTGTAAGTCTCTGATCCCGAATCCATCTTATCAGAGAATGTCGAATTTCATTTGTGTGTATGTTTTCTGGGTTGTTGGGGTTTGTGATTCTGGATCCTTGGGTACTCGAGTTTATGAGTAATATTCTGTTGAGTGCATTCGTCCATGGCGCTTGGGGTTTATTTCTTTAGTTTTTGGTAATTTTACTGTAGTCTTGCTATTTGCCTGTTTGAGGTTATGAAATGACATGATTTGATTTGCTGGCTACGAGGAAGTGTGGGAAATGTTATACCATAGACCCTTCTTCCAAAACCTTCGTTTTTGTAATTTTGATTTGTTTTGTATTGTGGTTTCAATGATTGAGGATTTCATTTAAGAATGATTGAGGATTTCGTTTGAGAATTATAAGTTAACAAGGGATCTGAAGAAACAAAGAATACCATTGTCATTAGAGGTTGCCAAACAGCATGAAAAGAAATTCTCCATGGTCCAGGGAGAATGTGGTTTGCCCAAGTTTGAAGATCTTAATTTCGATGTCATTGGACTGCCGTTCTTTCTCATCCCTGTTATTTGAGTTTTGAGATGAAAGTGGGGTTCAATCTTTTTGAAGGTTTCCATATGGGAAAGAAGGAAGTACAGCCAACTGGCTAATAAGTAATACATCTACAGTTTACAGATGGTGCCACCTTCAAAATCCTTGGATTAAATCAACCTTGAGAATGAAAATGAATTTGTCTTAGAGCGTCATAGTAAGTATTAACTTCTTAAGGGGCTGAAAGCGAGCACTGCACGTGTTAGGGCTGTGCAGTTTCTCAAGCTTCTTGGAGATTTCACCATTCTTCAGGCACATCTTGAGAGTTTGGTGTTTCCTCCAAAATGACTACTTTCGAGTTTAAGGATATTACTCTTCGTGATGCCTCTTCTTTTTCCTGGTATTCCTACTAAAAATTTTCATAAAACCATTTGAGGGAAATTTGTCAAGCCATTTCTCTCACAAGGCCTAGGGAGGATATCTAGCAGGACCAGGTCCATTTTAAAAATTTTACAACTATTCATGTCATTCACTTTGTTTAAGATGCCTCATTTCTGATTATTTTGTGATTTGATCTTTGTACAGGGTTTCTAAAGGAGTGAGAGAACTTCCCGGAAACTTCCAGTCTGCCACTAGTAATGTTCCATCAGGAAAAGCCCTGATGTATTTTGGTTTGTTTCTAGCAACTGGGGTTTTCTTTATCTTCATCGCATTTACCATGTTCCTCCCTGTCATGGTTCTGATGCCTCAAAAGTTTGCCATCTGCTTCACCCTTGGATGCAGCTTCATCATTGTCTCCTTCTTTGCCCTCAAGGGTCCAAAGAATCAGCTGGCCCATATGTTCTCAAAAGAGGTCCCCTTGCTAAATGTTTCTTCTATTACATTTCTGATTTCTGCCAACTACCCTCTTGATATTTTATCTCATTCTACTCCGCTATTTGTTCCTTCGTTTCACAATGCAGAGACTTCCTTTTACGGCGATCTTTATCGGTAGCATGTTGGGCACCTTATACGTCTCCATGGGGCTCCACAGCTATGTTCTCTCAGTTATCTTCTCCGTAATACAGGTACCCAAACACAAGACATCATCTTTCTTCATTATTGTACAAAATTTTATTCCCATATTGCAAATCTTTCTACTTCATACTAGTGTGTTTATGATTGCTCTCTTTACCCGTTTCCTAACGTGTCACATACCCGTCTCTTATTTCTTGGTTTCTCTATCATATGCAACACCGATCAGTCCAAATTGAAACGTTGTCATTTCTCTAGGTTCTTGCACTTTCATACTATGCTGTTTCATATTTCCCTGGTGGGTCTACTGGGATGAAGTTTCTGTCATCCGCTCTAACGTCTTCAGTAATGAAGTGTTTCGGTAGGTGA

mRNA sequence

ATGCAGAAAATGGCGCAGGGATGGTTCACACAGGGCGGAGGTAGTGGGAGTGATAATCAGCTCAAAACTTCCTCTTCGCTGCTGGCCGATTGGAACTCCTACGCCGCGGAATCACAAGCTGCTGAGGATAGCACCTCCAGTTTGGGAATTGGATTCGATCTCGAAAGTGCTGTTAGGTCCGCTAATGATACCGTTTCAGGAACTTTCAGCGTGGTTTCTAAAGGAGTGAGAGAACTTCCCGGAAACTTCCAGTCTGCCACTAGTAATGTTCCATCAGGAAAAGCCCTGATGTATTTTGGTTTGTTTCTAGCAACTGGGGTTTTCTTTATCTTCATCGCATTTACCATGTTCCTCCCTGTCATGGTTCTGATGCCTCAAAAGTTTGCCATCTGCTTCACCCTTGGATGCAGCTTCATCATTGTCTCCTTCTTTGCCCTCAAGGGTCCAAAGAATCAGCTGGCCCATATGTTCTCAAAAGAGAGACTTCCTTTTACGGCGATCTTTATCGGTAGCATGTTGGGCACCTTATACGTCTCCATGGGGCTCCACAGCTATGTTCTCTCAGTTATCTTCTCCGTAATACAGGTTCTTGCACTTTCATACTATGCTGTTTCATATTTCCCTGGTGGGTCTACTGGGATGAAGTTTCTGTCATCCGCTCTAACGTCTTCAGTAATGAAGTGTTTCGGTAGGTGA

Coding sequence (CDS)

ATGCAGAAAATGGCGCAGGGATGGTTCACACAGGGCGGAGGTAGTGGGAGTGATAATCAGCTCAAAACTTCCTCTTCGCTGCTGGCCGATTGGAACTCCTACGCCGCGGAATCACAAGCTGCTGAGGATAGCACCTCCAGTTTGGGAATTGGATTCGATCTCGAAAGTGCTGTTAGGTCCGCTAATGATACCGTTTCAGGAACTTTCAGCGTGGTTTCTAAAGGAGTGAGAGAACTTCCCGGAAACTTCCAGTCTGCCACTAGTAATGTTCCATCAGGAAAAGCCCTGATGTATTTTGGTTTGTTTCTAGCAACTGGGGTTTTCTTTATCTTCATCGCATTTACCATGTTCCTCCCTGTCATGGTTCTGATGCCTCAAAAGTTTGCCATCTGCTTCACCCTTGGATGCAGCTTCATCATTGTCTCCTTCTTTGCCCTCAAGGGTCCAAAGAATCAGCTGGCCCATATGTTCTCAAAAGAGAGACTTCCTTTTACGGCGATCTTTATCGGTAGCATGTTGGGCACCTTATACGTCTCCATGGGGCTCCACAGCTATGTTCTCTCAGTTATCTTCTCCGTAATACAGGTTCTTGCACTTTCATACTATGCTGTTTCATATTTCCCTGGTGGGTCTACTGGGATGAAGTTTCTGTCATCCGCTCTAACGTCTTCAGTAATGAAGTGTTTCGGTAGGTGA

Protein sequence

MQKMAQGWFTQGGGSGSDNQLKTSSSLLADWNSYAAESQAAEDSTSSLGIGFDLESAVRSANDTVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAICFTLGCSFIIVSFFALKGPKNQLAHMFSKERLPFTAIFIGSMLGTLYVSMGLHSYVLSVIFSVIQVLALSYYAVSYFPGGSTGMKFLSSALTSSVMKCFGR

Homology

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BLAST of Moc11g12560 vs. NCBI nr
Match: XP_022139356.1 (protein transport protein SFT2 [Momordica charantia])

HSP 1 Score: 434.5 bits (1116), Expect = 5.8e-118
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MQKMAQGWFTQGGGSGSDNQLKTSSSLLADWNSYAAESQAAEDSTSSLGIGFDLESAVRS 60
           MQKMAQGWFTQGGGSGSDNQLKTSSSLLADWNSYAAESQAAEDSTSSLGIGFDLESAVRS
Sbjct: 1   MQKMAQGWFTQGGGSGSDNQLKTSSSLLADWNSYAAESQAAEDSTSSLGIGFDLESAVRS 60

Query: 61  ANDTVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV 120
           ANDTVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV
Sbjct: 61  ANDTVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV 120

Query: 121 MVLMPQKFAICFTLGCSFIIVSFFALKGPKNQLAHMFSKERLPFTAIFIGSMLGTLYVSM 180
           MVLMPQKFAICFTLGCSFIIVSFFALKGPKNQLAHMFSKERLPFTAIFIGSMLGTLYVSM
Sbjct: 121 MVLMPQKFAICFTLGCSFIIVSFFALKGPKNQLAHMFSKERLPFTAIFIGSMLGTLYVSM 180

Query: 181 GLHSYVLSVIFSVIQVLALSYYAVSYFPGGSTGMKFLSSALTSSVMKCFGR 232
           GLHSYVLSVIFSVIQVLALSYYAVSYFPGGSTGMKFLSSALTSSVMKCFGR
Sbjct: 181 GLHSYVLSVIFSVIQVLALSYYAVSYFPGGSTGMKFLSSALTSSVMKCFGR 231

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BLAST of Moc11g12560 vs. NCBI nr
Match: XP_038896417.1 (protein transport protein SFT2 [Benincasa hispida])

HSP 1 Score: 413.7 bits (1062), Expect = 1.1e-111
Identity = 220/231 (95.24%), Postives = 225/231 (97.40%), Query Frame = 0


Query: 1   MQKMAQGWFTQGGGSGSDNQLKTSSSLLADWNSYAAESQAAEDSTSSLGIGFDLESAVRS 60
           MQKMAQGWFTQGG SGSDNQLKTSSSLLADWNSY AESQAA+DSTSSLGIGFDLESAVRS
Sbjct: 1   MQKMAQGWFTQGGSSGSDNQLKTSSSLLADWNSY-AESQAADDSTSSLGIGFDLESAVRS 60

Query: 61  ANDTVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV 120
           AN+TVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV
Sbjct: 61  ANETVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV 120

Query: 121 MVLMPQKFAICFTLGCSFIIVSFFALKGPKNQLAHMFSKERLPFTAIFIGSMLGTLYVSM 180
           MVLMPQKFAICFTLGC FII SFF LKGPKNQLAHMFSKERLPFT IFIGSMLGTLYVSM
Sbjct: 121 MVLMPQKFAICFTLGCCFIIGSFFVLKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSM 180

Query: 181 GLHSYVLSVIFSVIQVLALSYYAVSYFPGGSTGMKFLSSALTSSVMKCFGR 232
           GLHSY+LSVIFSV+QVLAL+YYAVSYFPGGSTGMKFLSSALTSSVMKCFGR
Sbjct: 181 GLHSYILSVIFSVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVMKCFGR 230

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BLAST of Moc11g12560 vs. NCBI nr
Match: XP_022981600.1 (protein transport protein SFT2 [Cucurbita maxima])

HSP 1 Score: 406.4 bits (1043), Expect = 1.7e-109
Identity = 216/231 (93.51%), Postives = 225/231 (97.40%), Query Frame = 0


Query: 1   MQKMAQGWFTQGGGSGSDNQLKTSSSLLADWNSYAAESQAAEDSTSSLGIGFDLESAVRS 60
           MQK AQGWFTQGG SGSDNQLK+SSSLLADWNSY AESQA+EDS+S+LGIGFDLESAVRS
Sbjct: 1   MQKAAQGWFTQGGNSGSDNQLKSSSSLLADWNSY-AESQASEDSSSNLGIGFDLESAVRS 60

Query: 61  ANDTVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV 120
           AN+TVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV
Sbjct: 61  ANETVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV 120

Query: 121 MVLMPQKFAICFTLGCSFIIVSFFALKGPKNQLAHMFSKERLPFTAIFIGSMLGTLYVSM 180
           MVLMPQKFAICFTLGC FII SFFALKGP+NQLAHMFSKERLPFTAIFIGSMLGTLYVSM
Sbjct: 121 MVLMPQKFAICFTLGCCFIIGSFFALKGPQNQLAHMFSKERLPFTAIFIGSMLGTLYVSM 180

Query: 181 GLHSYVLSVIFSVIQVLALSYYAVSYFPGGSTGMKFLSSALTSSVMKCFGR 232
           GLHSYVLSV FSV+QVLAL+YYAVSYFPGGSTGMKFLSSALTSSVM+CFGR
Sbjct: 181 GLHSYVLSVFFSVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVMRCFGR 230

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BLAST of Moc11g12560 vs. NCBI nr
Match: XP_004139775.1 (protein transport protein SFT2 [Cucumis sativus])

HSP 1 Score: 405.6 bits (1041), Expect = 2.9e-109
Identity = 216/231 (93.51%), Postives = 222/231 (96.10%), Query Frame = 0


Query: 1   MQKMAQGWFTQGGGSGSDNQLKTSSSLLADWNSYAAESQAAEDSTSSLGIGFDLESAVRS 60
           MQKMAQGWFTQGG SGSDNQLKTSSSLLADWNSY AESQAA+DST +LGIG DLESAVRS
Sbjct: 1   MQKMAQGWFTQGGSSGSDNQLKTSSSLLADWNSY-AESQAADDSTFNLGIGLDLESAVRS 60

Query: 61  ANDTVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV 120
           AN+TVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV
Sbjct: 61  ANETVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV 120

Query: 121 MVLMPQKFAICFTLGCSFIIVSFFALKGPKNQLAHMFSKERLPFTAIFIGSMLGTLYVSM 180
           MVLMPQKFAICFTLGC FII SFFALKGPKNQLAHMFSKERLPFT IFIGSMLGTLYVSM
Sbjct: 121 MVLMPQKFAICFTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSM 180

Query: 181 GLHSYVLSVIFSVIQVLALSYYAVSYFPGGSTGMKFLSSALTSSVMKCFGR 232
           GLHSY+LSV FSV+QVLAL+YYAVSYFPGGSTGMKFLSSALTSSV KCFGR
Sbjct: 181 GLHSYILSVFFSVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 230

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BLAST of Moc11g12560 vs. NCBI nr
Match: XP_023525596.1 (protein transport protein SFT2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 404.8 bits (1039), Expect = 4.9e-109
Identity = 215/231 (93.07%), Postives = 224/231 (96.97%), Query Frame = 0


Query: 1   MQKMAQGWFTQGGGSGSDNQLKTSSSLLADWNSYAAESQAAEDSTSSLGIGFDLESAVRS 60
           MQK AQGWFTQGG SGSDNQLK+SSSLLADWNSY AESQA+ED +S+LGIGFDLESAVRS
Sbjct: 1   MQKAAQGWFTQGGNSGSDNQLKSSSSLLADWNSY-AESQASEDGSSNLGIGFDLESAVRS 60

Query: 61  ANDTVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV 120
           AN+TVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV
Sbjct: 61  ANETVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV 120

Query: 121 MVLMPQKFAICFTLGCSFIIVSFFALKGPKNQLAHMFSKERLPFTAIFIGSMLGTLYVSM 180
           MVLMPQKFAICFTLGC FII SFFALKGP+NQLAHMFSKERLPFTAIFIGSMLGTLYVSM
Sbjct: 121 MVLMPQKFAICFTLGCCFIIGSFFALKGPQNQLAHMFSKERLPFTAIFIGSMLGTLYVSM 180

Query: 181 GLHSYVLSVIFSVIQVLALSYYAVSYFPGGSTGMKFLSSALTSSVMKCFGR 232
           GLHSYVLSV FSV+QVLAL+YYAVSYFPGGSTGMKFLSSALTSSVM+CFGR
Sbjct: 181 GLHSYVLSVFFSVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVMRCFGR 230

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BLAST of Moc11g12560 vs. ExPASy Swiss-Prot
Match: P38166 (Protein transport protein SFT2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SFT2 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.5e-12
Identity = 57/207 (27.54%), Postives = 104/207 (50.24%), Query Frame = 0


Query: 19  NQLKTSSSLLADWNSYAAE-SQAAEDSTSSLGIGFDLESAVRSANDTVSGTFSVVSKGVR 78
           +Q+ +    L  WN    + SQ   +S  +L       S   S N      +  +    +
Sbjct: 8   DQVNSLRDSLNRWNQTRQQNSQGFNESAKTL-----FSSWADSLNTRAQDIYQTLPVSRQ 67

Query: 79  ELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAICFTLGCS 138
           +L  + + +   +   + ++ F  FL  G    F   T   PV+   P+KF + +T+G  
Sbjct: 68  DLVQDQEPSWFQLSRTERMVLFVCFL-LGATACFTLCTFLFPVLAAKPRKFGLLWTMGSL 127

Query: 139 FIIVSFFALKGPKNQLAHMFSKERLPFTAIFIGSMLGTLYVSMGLHSYVLSVIFSVIQVL 198
             +++F  L GP   L H+ ++ERLPF+  F  +   T+Y +    + VL++  ++++++
Sbjct: 128 LFVLAFGVLMGPLAYLKHLTARERLPFSMFFFATCFMTIYFAAFSKNTVLTITCALLELV 187

Query: 199 ALSYYAVSYFPGGSTGMKFLSSALTSS 225
           A+ YYA+SYFP G+TG++ LSSA  +S
Sbjct: 188 AVIYYAISYFPFGATGLRMLSSAGVNS 208

[Close]

BLAST of Moc11g12560 vs. ExPASy Swiss-Prot
Match: Q9P6K1 (Protein transport protein sft2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sft2 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.7e-09
Identity = 47/162 (29.01%), Postives = 85/162 (52.47%), Query Frame = 0


Query: 73  SKGVRELPGN-------FQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMP 132
           S    E+P N       FQS+  ++   +  M FG+ L   +    IA  MF PV+VL P
Sbjct: 38  SNDYTEIPTNASGGNSYFQSSEFSLSRWERYMLFGICLLGSLACYAIACFMF-PVLVLKP 97

Query: 133 QKFAICFTLGCSFIIVSFFALKGPKNQLAHMFSKERLPFTAIFIGSMLGTLYVSMGLHSY 192
           +KF + +T+G    ++ F  ++G       + + ERLP T  +  ++L T+  ++ + S 
Sbjct: 98  RKFVLLWTMGSLLAVLGFAIVQGFVAHFRQLTTMERLPITLSYFVTLLATIIATIKIKST 157

Query: 193 VLSVIFSVIQVLALSYYAVSYFPGG----STGMKFLSSALTS 224
           +LS++F V+ +L+   Y +++FP G    S G +  S +L++
Sbjct: 158 ILSIVFGVLHILSFVAYLIAFFPFGTRTVSLGTRMASRSLSN 198

[Close]

BLAST of Moc11g12560 vs. ExPASy Swiss-Prot
Match: Q8WV19 (Vesicle transport protein SFT2A OS=Homo sapiens OX=9606 GN=SFT2D1 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.4e-04
Identity = 37/122 (30.33%), Postives = 64/122 (52.46%), Query Frame = 0


Query: 88  SNVPSGKALMYFGLFLATGVFFIFIAF-TMFLPVMVLMPQKFAICFTLGCSFIIVSFFAL 147
           S++     L +F +    GVFF  +    ++LP  + +   FA+ +TLG    + S   L
Sbjct: 26  SSLSFNTRLKWFAICFVCGVFFSILGTGLLWLPGGIKL---FAVFYTLGNLAALASTCFL 85

Query: 148 KGPKNQLAHMFSKERLPFTAIFIGSMLGTLYVSMGLHSYVLSVIFSVIQVLALSYYAVSY 207
            GP  QL  MF   RL  T + +   + TL  ++  H   L+V+F ++Q L++++Y++SY
Sbjct: 86  MGPVKQLKKMFEATRLLATIVMLLCFIFTLCAALWWHKKGLAVLFCILQFLSMTWYSLSY 144

Query: 208 FP 209
            P
Sbjct: 146 IP 144

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BLAST of Moc11g12560 vs. ExPASy TrEMBL
Match: A0A6J1CCE7 (Vesicle transport protein OS=Momordica charantia OX=3673 GN=LOC111010307 PE=3 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 2.8e-118
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MQKMAQGWFTQGGGSGSDNQLKTSSSLLADWNSYAAESQAAEDSTSSLGIGFDLESAVRS 60
           MQKMAQGWFTQGGGSGSDNQLKTSSSLLADWNSYAAESQAAEDSTSSLGIGFDLESAVRS
Sbjct: 1   MQKMAQGWFTQGGGSGSDNQLKTSSSLLADWNSYAAESQAAEDSTSSLGIGFDLESAVRS 60

Query: 61  ANDTVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV 120
           ANDTVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV
Sbjct: 61  ANDTVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV 120

Query: 121 MVLMPQKFAICFTLGCSFIIVSFFALKGPKNQLAHMFSKERLPFTAIFIGSMLGTLYVSM 180
           MVLMPQKFAICFTLGCSFIIVSFFALKGPKNQLAHMFSKERLPFTAIFIGSMLGTLYVSM
Sbjct: 121 MVLMPQKFAICFTLGCSFIIVSFFALKGPKNQLAHMFSKERLPFTAIFIGSMLGTLYVSM 180

Query: 181 GLHSYVLSVIFSVIQVLALSYYAVSYFPGGSTGMKFLSSALTSSVMKCFGR 232
           GLHSYVLSVIFSVIQVLALSYYAVSYFPGGSTGMKFLSSALTSSVMKCFGR
Sbjct: 181 GLHSYVLSVIFSVIQVLALSYYAVSYFPGGSTGMKFLSSALTSSVMKCFGR 231

[Close]

BLAST of Moc11g12560 vs. ExPASy TrEMBL
Match: A0A6J1IZY9 (Vesicle transport protein OS=Cucurbita maxima OX=3661 GN=LOC111480670 PE=3 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 8.1e-110
Identity = 216/231 (93.51%), Postives = 225/231 (97.40%), Query Frame = 0


Query: 1   MQKMAQGWFTQGGGSGSDNQLKTSSSLLADWNSYAAESQAAEDSTSSLGIGFDLESAVRS 60
           MQK AQGWFTQGG SGSDNQLK+SSSLLADWNSY AESQA+EDS+S+LGIGFDLESAVRS
Sbjct: 1   MQKAAQGWFTQGGNSGSDNQLKSSSSLLADWNSY-AESQASEDSSSNLGIGFDLESAVRS 60

Query: 61  ANDTVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV 120
           AN+TVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV
Sbjct: 61  ANETVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV 120

Query: 121 MVLMPQKFAICFTLGCSFIIVSFFALKGPKNQLAHMFSKERLPFTAIFIGSMLGTLYVSM 180
           MVLMPQKFAICFTLGC FII SFFALKGP+NQLAHMFSKERLPFTAIFIGSMLGTLYVSM
Sbjct: 121 MVLMPQKFAICFTLGCCFIIGSFFALKGPQNQLAHMFSKERLPFTAIFIGSMLGTLYVSM 180

Query: 181 GLHSYVLSVIFSVIQVLALSYYAVSYFPGGSTGMKFLSSALTSSVMKCFGR 232
           GLHSYVLSV FSV+QVLAL+YYAVSYFPGGSTGMKFLSSALTSSVM+CFGR
Sbjct: 181 GLHSYVLSVFFSVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVMRCFGR 230

[Close]

BLAST of Moc11g12560 vs. ExPASy TrEMBL
Match: A0A6J1FPP1 (Vesicle transport protein OS=Cucurbita moschata OX=3662 GN=LOC111446136 PE=3 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.1e-109
Identity = 214/231 (92.64%), Postives = 225/231 (97.40%), Query Frame = 0


Query: 1   MQKMAQGWFTQGGGSGSDNQLKTSSSLLADWNSYAAESQAAEDSTSSLGIGFDLESAVRS 60
           MQK AQGWFTQGG SGSDNQLK+SSSLLADWNSY AESQA+EDS+S+LGIGFDLESAVRS
Sbjct: 1   MQKAAQGWFTQGGNSGSDNQLKSSSSLLADWNSY-AESQASEDSSSNLGIGFDLESAVRS 60

Query: 61  ANDTVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV 120
           AN+TVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV
Sbjct: 61  ANETVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV 120

Query: 121 MVLMPQKFAICFTLGCSFIIVSFFALKGPKNQLAHMFSKERLPFTAIFIGSMLGTLYVSM 180
           MV+MPQKFAICFTLGC FII SFFALKGP+NQLAHMFSKERLPFTAIFIGSMLGTLYVSM
Sbjct: 121 MVIMPQKFAICFTLGCCFIIGSFFALKGPQNQLAHMFSKERLPFTAIFIGSMLGTLYVSM 180

Query: 181 GLHSYVLSVIFSVIQVLALSYYAVSYFPGGSTGMKFLSSALTSSVMKCFGR 232
           GLHSYVLSV FSV+QVLAL+YYAVSYFPGGSTGMKFL+SALTSSVM+CFGR
Sbjct: 181 GLHSYVLSVFFSVLQVLALAYYAVSYFPGGSTGMKFLTSALTSSVMRCFGR 230

[Close]

BLAST of Moc11g12560 vs. ExPASy TrEMBL
Match: A0A6J1IM95 (Vesicle transport protein OS=Cucurbita maxima OX=3661 GN=LOC111476540 PE=3 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 2.0e-100
Identity = 200/230 (86.96%), Postives = 212/230 (92.17%), Query Frame = 0


Query: 1   MQKMAQGWFTQGGGSGSDNQLKTSSSLLADWNSYAAESQAAEDSTSSLGIGFDLESAVRS 60
           M K AQGWFTQG  SGSDNQ+K SSSLLA WNSY AESQAA+DS+S+  IGFDLESAVRS
Sbjct: 1   MLKTAQGWFTQGDSSGSDNQVKPSSSLLASWNSY-AESQAADDSSSNSRIGFDLESAVRS 60

Query: 61  ANDTVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV 120
           AN+TVSGTFSVVSKGVRELPGN QSATSNVPSGKALMYFGLFLATGVFFIFIAF +FLP+
Sbjct: 61  ANETVSGTFSVVSKGVRELPGNLQSATSNVPSGKALMYFGLFLATGVFFIFIAFALFLPI 120

Query: 121 MVLMPQKFAICFTLGCSFIIVSFFALKGPKNQLAHMFSKERLPFTAIFIGSMLGTLYVSM 180
           MVL+P KFAICFTLGC FII SFFALKGPKNQLAHMFSKERLPFT IFIG M GTLYVSM
Sbjct: 121 MVLVPHKFAICFTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGCMFGTLYVSM 180

Query: 181 GLHSYVLSVIFSVIQVLALSYYAVSYFPGGSTGMKFLSSALTSSVMKCFG 231
           GLH+Y+LSVIFSV+QVLAL+YYAVSYFPGGSTGMKFLSSAL SSVMKCFG
Sbjct: 181 GLHNYILSVIFSVLQVLALAYYAVSYFPGGSTGMKFLSSALMSSVMKCFG 229

[Close]

BLAST of Moc11g12560 vs. ExPASy TrEMBL
Match: A0A6J1FAT4 (Vesicle transport protein OS=Cucurbita moschata OX=3662 GN=LOC111443623 PE=3 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.4e-100
Identity = 199/230 (86.52%), Postives = 213/230 (92.61%), Query Frame = 0


Query: 1   MQKMAQGWFTQGGGSGSDNQLKTSSSLLADWNSYAAESQAAEDSTSSLGIGFDLESAVRS 60
           M K AQGWFTQG  SGSDNQ+K +SSLLA+WNSY AESQAA+DS+S+  IGFDLE+AVRS
Sbjct: 1   MLKTAQGWFTQGDSSGSDNQVKPTSSLLANWNSY-AESQAADDSSSNSRIGFDLENAVRS 60

Query: 61  ANDTVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV 120
           AN+TVSGTFSVVSKGVRELPGN QSATSNVPSGKALMYFGLFLATGVFFIFIAF +FLP+
Sbjct: 61  ANETVSGTFSVVSKGVRELPGNLQSATSNVPSGKALMYFGLFLATGVFFIFIAFALFLPI 120

Query: 121 MVLMPQKFAICFTLGCSFIIVSFFALKGPKNQLAHMFSKERLPFTAIFIGSMLGTLYVSM 180
           MVL+P KFAICFTLGC FII SFFALKGPKNQLAHMFSKERLPFT IFIG M GTLYVSM
Sbjct: 121 MVLVPHKFAICFTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGCMFGTLYVSM 180

Query: 181 GLHSYVLSVIFSVIQVLALSYYAVSYFPGGSTGMKFLSSALTSSVMKCFG 231
           GLHSY+LSVIFSV+QVLAL+YYAVSYFPGGSTGMKFLSSAL SSVMKCFG
Sbjct: 181 GLHSYILSVIFSVLQVLALAYYAVSYFPGGSTGMKFLSSALMSSVMKCFG 229

[Close]

BLAST of Moc11g12560 vs. TAIR 10
Match: AT4G26550.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 320.5 bits (820), Expect = 1.1e-87
Identity = 173/228 (75.88%), Postives = 198/228 (86.84%), Query Frame = 0


Query: 4   MAQGWFTQGGGSGSDNQLKTSSSLLADWNSYAAESQAAEDSTSSLGIGFDLESAVRSAND 63
           M+QGWF+ GG S  D Q ++ SSLLADWNSYAA S+  E+S  S   GFD+ESAVRSAND
Sbjct: 1   MSQGWFSMGGSSTVDQQQQSGSSLLADWNSYAA-SRDFEESGGS--FGFDIESAVRSAND 60

Query: 64  TVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVL 123
           TVSGTFSVVSKGVR++PG+ QSATS++PSGKALMYFGL LA+GVFFIFIAFTMFLPVMVL
Sbjct: 61  TVSGTFSVVSKGVRDIPGSLQSATSSMPSGKALMYFGLLLASGVFFIFIAFTMFLPVMVL 120

Query: 124 MPQKFAICFTLGCSFIIVSFFALKGPKNQLAHMFSKERLPFTAIFIGSMLGTLYVSMGLH 183
           MPQKFAICFTLGC FII SFFAL+GPKNQLAHM S ERLP T  FI +M+GT+YVSM LH
Sbjct: 121 MPQKFAICFTLGCGFIIGSFFALRGPKNQLAHMSSMERLPSTLGFIATMVGTIYVSMVLH 180

Query: 184 SYVLSVIFSVIQVLALSYYAVSYFPGGSTGMKFLSSALTSSVMKCFGR 232
           SY+LSV+FSV+QVLAL YY +SYFPGGS+GM+FLSSALTSS ++ FGR
Sbjct: 181 SYILSVLFSVLQVLALVYYCISYFPGGSSGMRFLSSALTSSALRVFGR 225

[Close]

BLAST of Moc11g12560 vs. TAIR 10
Match: AT5G56020.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 305.1 bits (780), Expect = 4.9e-83
Identity = 170/236 (72.03%), Postives = 196/236 (83.05%), Query Frame = 0


Query: 1   MQKMAQGWFTQGGGSGSDNQ----LKT-SSSLLADWNSYAAESQAAEDSTSSLGIGFDLE 60
           M+KMA+GWF   G S S +Q    L+T  +SLLADWNSYAA     ED+ +   +GFD+E
Sbjct: 1   MEKMAKGWFPMSGTSSSGDQQQQPLQTGGTSLLADWNSYAASRDFEEDTGT---LGFDIE 60

Query: 61  SAVRSANDTVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFT 120
           SAVRSANDTVSGTF+VVSKGVR+   N QSATS++PSGKALMYFGL LA+GVFFIFIAFT
Sbjct: 61  SAVRSANDTVSGTFNVVSKGVRD---NLQSATSSMPSGKALMYFGLLLASGVFFIFIAFT 120

Query: 121 MFLPVMVLMPQKFAICFTLGCSFIIVSFFALKGPKNQLAHMFSKERLPFTAIFIGSMLGT 180
           MFLPVMVLMPQKFAICFTLGC FII SFFAL+GP+NQLAHM S ERLP T  FI +M+GT
Sbjct: 121 MFLPVMVLMPQKFAICFTLGCGFIIGSFFALRGPQNQLAHMSSAERLPLTLGFIATMVGT 180

Query: 181 LYVSMGLHSYVLSVIFSVIQVLALSYYAVSYFPGGSTGMKFLSSALTSSVMKCFGR 232
           +YVSM LHSY+LSVIFS +QV+AL+YY +SYFPGGS+GMKFLSS LTSSV + FGR
Sbjct: 181 IYVSMVLHSYILSVIFSALQVIALAYYCISYFPGGSSGMKFLSSTLTSSVFRMFGR 230

[Close]

BLAST of Moc11g12560 vs. TAIR 10
Match: AT5G24170.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 57.0 bits (136), Expect = 2.3e-08
Identity = 38/110 (34.55%), Postives = 64/110 (58.18%), Query Frame = 0


Query: 99  FGLFLATGVFFIFIAFTMFLPVMVLMPQKFAICFTLGCSFIIVSFFALKGPKNQLAHMFS 158
           F   LATG+  +F++  +F      +P KFA+ FT G    I S   L GP+ Q++ MF 
Sbjct: 41  FAASLATGLLLMFLSMIVF-----GIPIKFALLFTFGNVLAIGSTAFLMGPEQQMSMMFD 100

Query: 159 KERLPFTAIFIGSMLGTLYVSMGLHSYVLSVIFSVIQVLALSYYAVSYFP 209
             R   T+I+IG ++  L  ++ +HS +L+V+  + ++ AL +Y++SY P
Sbjct: 101 PVRFLATSIYIGCVVVALICALLIHSKILTVLAILCEICALIWYSLSYIP 145

The following BLAST results are available for this feature:

BLAST of Moc11g12560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139356.1	5.8e-118	100.00	protein transport protein SFT2 [Momordica charantia]	[more]
XP_038896417.1	1.1e-111	95.24	protein transport protein SFT2 [Benincasa hispida]	[more]
XP_022981600.1	1.7e-109	93.51	protein transport protein SFT2 [Cucurbita maxima]	[more]
XP_004139775.1	2.9e-109	93.51	protein transport protein SFT2 [Cucumis sativus]	[more]
XP_023525596.1	4.9e-109	93.07	protein transport protein SFT2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Moc11g12560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P38166	1.5e-12	27.54	Protein transport protein SFT2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /...	[more]
Q9P6K1	2.7e-09	29.01	Protein transport protein sft2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2...	[more]
Q8WV19	3.4e-04	30.33	Vesicle transport protein SFT2A OS=Homo sapiens OX=9606 GN=SFT2D1 PE=1 SV=1	[more]

BLAST of Moc11g12560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CCE7	2.8e-118	100.00	Vesicle transport protein OS=Momordica charantia OX=3673 GN=LOC111010307 PE=3 SV...	[more]
A0A6J1IZY9	8.1e-110	93.51	Vesicle transport protein OS=Cucurbita maxima OX=3661 GN=LOC111480670 PE=3 SV=1	[more]
A0A6J1FPP1	3.1e-109	92.64	Vesicle transport protein OS=Cucurbita moschata OX=3662 GN=LOC111446136 PE=3 SV=...	[more]
A0A6J1IM95	2.0e-100	86.96	Vesicle transport protein OS=Cucurbita maxima OX=3661 GN=LOC111476540 PE=3 SV=1	[more]
A0A6J1FAT4	3.4e-100	86.52	Vesicle transport protein OS=Cucurbita moschata OX=3662 GN=LOC111443623 PE=3 SV=...	[more]

BLAST of Moc11g12560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26550.1	1.1e-87	75.88	Got1/Sft2-like vescicle transport protein family	[more]
AT5G56020.1	4.9e-83	72.03	Got1/Sft2-like vescicle transport protein family	[more]
AT5G24170.1	2.3e-08	34.55	Got1/Sft2-like vescicle transport protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007305	Vesicle transport protein, Got1/SFT2-like	PFAM	PF04178	Got1	coord: 106..218 e-value: 3.1E-31 score: 108.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR23137:SF35	VESICLE TRANSPORT PROTEIN	coord: 6..231
IPR011691	Vesicle transport protein SFT2	PANTHER	PTHR23137	UNCHARACTERIZED	coord: 6..231

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g12560.1	Moc11g12560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0016021	integral component of membrane