Moc11g10830 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g10830
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Dynein light chain
Location	chr11: 7848609 .. 7849655 (-)
RNA-Seq Expression	Moc11g10830
Synteny	Moc11g10830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGAAGGTAAAGCAATAATCGGAGAGACGGATATGTTGCAGGGGATGCAGCAGGACGCGCTGGACCTTGCGGCTAAGGCCCTCGACAGCTTCGATGTCACTGAAGCCACAGATATTGCTCGTTTCATTAAAAAGGTAATAAATTAAAAACAAAAATCATGTGGGAAATATTATAAATTTGTTTAAATCTTTTTTTTCCATCTCAATTTCATAACACCACACGCAATAAAATATATATTTTTATAGATTTGTAGTAAAAGATTTCGAATTAATTTACTAAATACAAACTAAAATTGTCATGATTTTAAAGTATAAAGATCAAAATCAACATTTTAAAAGTGAAAGTACATGTCGAAAATAAATCAGTGCCCAAAATAAGATTTAAAAGTAGCTTGTTTGAGGAAATTTTTTGAAGATAAGCCGACCAACAAGAAAAATGTTTGGTCAAAGCCAAAAAGAGATTGATCCACTTCATAGAAAGAAAAACTGCATGAATGAAGGAATTGTTGATTAGTGGATGAGTATTTCGTGCCAGTTTATGCATCATCTTACTAGTCGCACTCCATTGTATGATCTCAAATCTAATAACATTTTTTTATTACAACATGTGTGGTGGAGATTCAAGCTCGCAGTAGGAGGTGATCAAGAAACTAAAAAGATTTTTAATATTTAATAATTGTCATGAGATTTAGTCCTCTATCCAATGCGTATTTAACTTGTTTCTCTTACATTAGCGATAGAGAGGTGAATCCATGATAGTTAACTTTCTCGAATTCGAAAATTCAAAACGAAATTGTTACCCAGCGGGGTTTCGAGGAGCTGATTTTGGGTTGAAAATTTTGGCAGGAATTTGACAGGATACATGGGCCAGGATGGCAATGCATAGTCGGCACAGATTTTGGATCATTTGTGACACATTGTTTTGGGTGCTTCATCTATTTTTGTGTTGGAAACCTTGCAGTTTTGCTCTTTAGAGGCTCTGCAGGCCCACAACAAACTGAGCCTACTGATCAGTTTGCTGCTTTGGAGGCTCTCAAAGGATGA

mRNA sequence

ATGTTGGAAGGTAAAGCAATAATCGGAGAGACGGATATGTTGCAGGGGATGCAGCAGGACGCGCTGGACCTTGCGGCTAAGGCCCTCGACAGCTTCGATGTCACTGAAGCCACAGATATTGCTCGTTTCATTAAAAAGGAATTTGACAGGATACATGGGCCAGGATGGCAATGCATAGTCGGCACAGATTTTGGATCATTTGTGACACATTGTTTTGGGTGCTTCATCTATTTTTGTGTTGGAAACCTTGCAGTTTTGCTCTTTAGAGGCTCTGCAGGCCCACAACAAACTGAGCCTACTGATCAGTTTGCTGCTTTGGAGGCTCTCAAAGGATGA

Coding sequence (CDS)

ATGTTGGAAGGTAAAGCAATAATCGGAGAGACGGATATGTTGCAGGGGATGCAGCAGGACGCGCTGGACCTTGCGGCTAAGGCCCTCGACAGCTTCGATGTCACTGAAGCCACAGATATTGCTCGTTTCATTAAAAAGGAATTTGACAGGATACATGGGCCAGGATGGCAATGCATAGTCGGCACAGATTTTGGATCATTTGTGACACATTGTTTTGGGTGCTTCATCTATTTTTGTGTTGGAAACCTTGCAGTTTTGCTCTTTAGAGGCTCTGCAGGCCCACAACAAACTGAGCCTACTGATCAGTTTGCTGCTTTGGAGGCTCTCAAAGGATGA

Protein sequence

MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPTDQFAALEALKG

Homology

[Close]

BLAST of Moc11g10830 vs. NCBI nr
Match: XP_022139644.1 (dynein light chain LC6, flagellar outer arm [Momordica charantia])

HSP 1 Score: 230.3 bits (586), Expect = 7.9e-57
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIV 60
           MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIV
Sbjct: 1   MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIV 60

Query: 61  GTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPTDQFAALEALKG 112
           GTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPTDQFAALEALKG
Sbjct: 61  GTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPTDQFAALEALKG 111

[Close]

BLAST of Moc11g10830 vs. NCBI nr
Match: XP_022941140.1 (dynein light chain 2, cytoplasmic-like [Cucurbita moschata])

HSP 1 Score: 194.1 bits (492), Expect = 6.3e-46
Identity = 94/111 (84.68%), Postives = 97/111 (87.39%), Query Frame = 0


Query: 1   MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIV 60
           MLEGKAI+GETDMLQ MQQDALDLAAKALD FDVTEATDIARFIKKEFDR HG GWQCIV
Sbjct: 1   MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDVTEATDIARFIKKEFDRTHGGGWQCIV 60

Query: 61  GTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPTDQFAALEALKG 112
           GTDFGSFVTHCFGCFIYFCVG+LA+LLFRGS  PQQ      FAA E LKG
Sbjct: 61  GTDFGSFVTHCFGCFIYFCVGSLAILLFRGSDAPQQHPHPTHFAASETLKG 111

[Close]

BLAST of Moc11g10830 vs. NCBI nr
Match: KAG6607846.1 (hypothetical protein SDJN03_01188, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 192.2 bits (487), Expect = 2.4e-45
Identity = 93/111 (83.78%), Postives = 96/111 (86.49%), Query Frame = 0


Query: 1   MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIV 60
           MLEGKAI+GETDMLQ MQQDALDLAAKALD FDVTEATDIARFIKKEFDR HG GWQCIV
Sbjct: 1   MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDVTEATDIARFIKKEFDRTHGGGWQCIV 60

Query: 61  GTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPTDQFAALEALKG 112
           GTDFGSFVTHCFGCFIYFCVG+LA+LLFRGS  PQQ      F A E LKG
Sbjct: 61  GTDFGSFVTHCFGCFIYFCVGSLAILLFRGSDAPQQHPHPTHFPASETLKG 111

[Close]

BLAST of Moc11g10830 vs. NCBI nr
Match: XP_022981659.1 (dynein light chain 2, cytoplasmic-like [Cucurbita maxima])

HSP 1 Score: 191.8 bits (486), Expect = 3.1e-45
Identity = 93/111 (83.78%), Postives = 96/111 (86.49%), Query Frame = 0


Query: 1   MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIV 60
           MLEGKAI+GETDMLQ MQQDALDLAAKALD FDVTEATDIARFIKKEFDR HG GWQCIV
Sbjct: 1   MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDVTEATDIARFIKKEFDRTHGGGWQCIV 60

Query: 61  GTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPTDQFAALEALKG 112
           GTDFGSFVTHCFGCFIYFCVG+LA+LLFRGS  PQQ       AA E LKG
Sbjct: 61  GTDFGSFVTHCFGCFIYFCVGSLAILLFRGSDAPQQHPHPTHLAASETLKG 111

[Close]

BLAST of Moc11g10830 vs. NCBI nr
Match: XP_023525676.1 (dynein light chain 2, cytoplasmic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189.5 bits (480), Expect = 1.6e-44
Identity = 91/111 (81.98%), Postives = 96/111 (86.49%), Query Frame = 0


Query: 1   MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIV 60
           MLEGKAI+GETDMLQ MQQDAL+LAAKALD FDVTEATDIARFIKKEFDR HG GWQCIV
Sbjct: 1   MLEGKAIVGETDMLQAMQQDALELAAKALDRFDVTEATDIARFIKKEFDRTHGGGWQCIV 60

Query: 61  GTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPTDQFAALEALKG 112
           GTDFGSFVTHCFGCFIYFCVG+LA+LLFRGS  PQQ      F A + LKG
Sbjct: 61  GTDFGSFVTHCFGCFIYFCVGSLAILLFRGSDAPQQHPHPTHFPASQTLKG 111

[Close]

BLAST of Moc11g10830 vs. ExPASy Swiss-Prot
Match: O02414 (Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=1043166 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.2e-19
Identity = 48/89 (53.93%), Postives = 64/89 (71.91%), Query Frame = 0


Query: 1  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIV 60
          M E KA+I   DM + MQQDA+D A +AL+ F++ +  DIA +IKKEFD+ + P W CIV
Sbjct: 1  MSERKAVIKNADMPEDMQQDAVDCATQALEKFNIEK--DIAAYIKKEFDKKYNPTWHCIV 60

Query: 61 GTDFGSFVTHCFGCFIYFCVGNLAVLLFR 90
          G +FGS+VTH    FIYF +G +AVLLF+
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAVLLFK 87

[Close]

BLAST of Moc11g10830 vs. ExPASy Swiss-Prot
Match: Q22799 (Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.5e-18
Identity = 45/89 (50.56%), Postives = 64/89 (71.91%), Query Frame = 0


Query: 1  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIV 60
          M++ KA+I   DM   MQQDA+D A +AL+ +++ +  DIA +IKKEFD+ + P W CIV
Sbjct: 1  MVDRKAVIKNADMSDDMQQDAIDCATQALEKYNIEK--DIAAYIKKEFDKKYNPTWHCIV 60

Query: 61 GTDFGSFVTHCFGCFIYFCVGNLAVLLFR 90
          G +FGS+VTH    FIYF +G +A+LLF+
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of Moc11g10830 vs. ExPASy Swiss-Prot
Match: O96860 (Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=Cdlc2 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.5e-18
Identity = 46/89 (51.69%), Postives = 64/89 (71.91%), Query Frame = 0


Query: 1  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIV 60
          M + KA+I   DM + MQQDA+D A +AL+ +++ +  DIA FIKKEFD+ + P W CIV
Sbjct: 1  MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEK--DIAAFIKKEFDKKYNPTWHCIV 60

Query: 61 GTDFGSFVTHCFGCFIYFCVGNLAVLLFR 90
          G +FGS+VTH    FIYF +G +A+LLF+
Sbjct: 61 GRNFGSYVTHETRHFIYFYLGQVAILLFK 87

[Close]

BLAST of Moc11g10830 vs. ExPASy Swiss-Prot
Match: Q39580 (Dynein 8 kDa light chain, flagellar outer arm OS=Chlamydomonas reinhardtii OX=3055 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.4e-18
Identity = 45/85 (52.94%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 5  KAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDF 64
          KA+I   DM + MQ DA+D A +AL+ +++ +  DIA +IKKEFDR H P W CIVG +F
Sbjct: 7  KAVIKNADMSEEMQADAVDCATQALEKYNIEK--DIAAYIKKEFDRKHNPTWHCIVGRNF 66

Query: 65 GSFVTHCFGCFIYFCVGNLAVLLFR 90
          GS+VTH    FIYF +G +A+LLF+
Sbjct: 67 GSYVTHETKHFIYFYLGQVAILLFK 89

[Close]

BLAST of Moc11g10830 vs. ExPASy Swiss-Prot
Match: Q24117 (Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=ctp PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.4e-18
Identity = 45/89 (50.56%), Postives = 64/89 (71.91%), Query Frame = 0


Query: 1  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIV 60
          M + KA+I   DM + MQQDA+D A +AL+ +++ +  DIA +IKKEFD+ + P W CIV
Sbjct: 1  MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEK--DIAAYIKKEFDKKYNPTWHCIV 60

Query: 61 GTDFGSFVTHCFGCFIYFCVGNLAVLLFR 90
          G +FGS+VTH    FIYF +G +A+LLF+
Sbjct: 61 GRNFGSYVTHETRHFIYFYLGQVAILLFK 87

[Close]

BLAST of Moc11g10830 vs. ExPASy TrEMBL
Match: A0A6J1CDL8 (Dynein light chain OS=Momordica charantia OX=3673 GN=LOC111010496 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 3.8e-57
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIV 60
           MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIV
Sbjct: 1   MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIV 60

Query: 61  GTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPTDQFAALEALKG 112
           GTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPTDQFAALEALKG
Sbjct: 61  GTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPTDQFAALEALKG 111

[Close]

BLAST of Moc11g10830 vs. ExPASy TrEMBL
Match: A0A6J1FSQ1 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111446528 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 3.0e-46
Identity = 94/111 (84.68%), Postives = 97/111 (87.39%), Query Frame = 0


Query: 1   MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIV 60
           MLEGKAI+GETDMLQ MQQDALDLAAKALD FDVTEATDIARFIKKEFDR HG GWQCIV
Sbjct: 1   MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDVTEATDIARFIKKEFDRTHGGGWQCIV 60

Query: 61  GTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPTDQFAALEALKG 112
           GTDFGSFVTHCFGCFIYFCVG+LA+LLFRGS  PQQ      FAA E LKG
Sbjct: 61  GTDFGSFVTHCFGCFIYFCVGSLAILLFRGSDAPQQHPHPTHFAASETLKG 111

[Close]

BLAST of Moc11g10830 vs. ExPASy TrEMBL
Match: A0A6J1J2G7 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111480715 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.5e-45
Identity = 93/111 (83.78%), Postives = 96/111 (86.49%), Query Frame = 0


Query: 1   MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIV 60
           MLEGKAI+GETDMLQ MQQDALDLAAKALD FDVTEATDIARFIKKEFDR HG GWQCIV
Sbjct: 1   MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDVTEATDIARFIKKEFDRTHGGGWQCIV 60

Query: 61  GTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPTDQFAALEALKG 112
           GTDFGSFVTHCFGCFIYFCVG+LA+LLFRGS  PQQ       AA E LKG
Sbjct: 61  GTDFGSFVTHCFGCFIYFCVGSLAILLFRGSDAPQQHPHPTHLAASETLKG 111

[Close]

BLAST of Moc11g10830 vs. ExPASy TrEMBL
Match: A0A072TRW8 (Dynein light chain OS=Medicago truncatula OX=3880 GN=25502567 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 9.8e-45
Identity = 89/110 (80.91%), Postives = 100/110 (90.91%), Query Frame = 0


Query: 1   MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIV 60
           MLEGKA+IGETDMLQ MQQDALDLA KALD +DVTEA DIARFIKKEFDR+HGPGWQCIV
Sbjct: 1   MLEGKAVIGETDMLQTMQQDALDLACKALDFYDVTEAIDIARFIKKEFDRVHGPGWQCIV 60

Query: 61  GTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPTDQFAALEALK 111
           GTDFGSFVTHC GCFIYFC+G++A+LLF+GSAGPQ  E  +QF+A+EA K
Sbjct: 61  GTDFGSFVTHCSGCFIYFCIGSMAILLFKGSAGPQAEE--NQFSAIEATK 108

[Close]

BLAST of Moc11g10830 vs. ExPASy TrEMBL
Match: A0A1S3TIQ6 (Dynein light chain OS=Vigna radiata var. radiata OX=3916 GN=LOC106755918 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.9e-44
Identity = 90/110 (81.82%), Postives = 100/110 (90.91%), Query Frame = 0


Query: 1   MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIV 60
           MLEGKA+IGETDMLQ MQQDA+DLA+KALD FDVTEA +IARFIKKEFDR+HGPGWQCIV
Sbjct: 1   MLEGKAVIGETDMLQTMQQDAMDLASKALDVFDVTEAIEIARFIKKEFDRMHGPGWQCIV 60

Query: 61  GTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGPQQTEPTDQFAALEALK 111
           GTDFGSFVTHC GCFIYFC+GNLA+LLFRGSA P+  E  +QF+ALEA K
Sbjct: 61  GTDFGSFVTHCCGCFIYFCLGNLAILLFRGSAAPEAHE--NQFSALEAAK 108

[Close]

BLAST of Moc11g10830 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 147.9 bits (372), Expect = 4.8e-36
Identity = 69/93 (74.19%), Postives = 80/93 (86.02%), Query Frame = 0


Query: 1  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIV 60
          MLEGKA++G+TDM Q M++DAL LA+KALD FDVTE T IARFIKKEFDR +G GWQCIV
Sbjct: 1  MLEGKAVMGDTDMKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIV 60

Query: 61 GTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAG 94
          GT FGSFVTHC GCFI+F VG+L +LLF+GS G
Sbjct: 61 GTHFGSFVTHCSGCFIHFSVGSLTILLFKGSVG 93

[Close]

BLAST of Moc11g10830 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 104.0 bits (258), Expect = 8.0e-23
Identity = 50/91 (54.95%), Postives = 65/91 (71.43%), Query Frame = 0


Query: 1  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIV 60
          MLEGKA + ETDM   MQ  A+ +A+++LD FDV ++  IA  IKKEFD  +G GWQC+V
Sbjct: 1  MLEGKAKVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVV 60

Query: 61 GTDFGSFVTHCFGCFIYFCVGNLAVLLFRGS 92
          GT+FG F TH  G FIYF +G L  L+F+G+
Sbjct: 61 GTNFGCFFTHSKGTFIYFHLGTLNFLIFKGA 91

[Close]

BLAST of Moc11g10830 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 100.1 bits (248), Expect = 1.2e-21
Identity = 48/94 (51.06%), Postives = 65/94 (69.15%), Query Frame = 0


Query: 1  MLEGKAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIV 60
          MLEGKA++ ++DM   MQ  A+  A++ALD FDV +   IA  IKKEFD  +G GWQC+V
Sbjct: 1  MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVV 60

Query: 61 GTDFGSFVTHCFGCFIYFCVGNLAVLLFRGSAGP 95
          G++FG F TH  G FIYF +  L  L+F+G++ P
Sbjct: 61 GSNFGCFFTHSKGTFIYFQLETLKFLIFKGASTP 94

[Close]

BLAST of Moc11g10830 vs. TAIR 10
Match: AT4G15930.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 80.9 bits (198), Expect = 7.2e-16
Identity = 40/85 (47.06%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 5   KAIIGETDMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDF 64
           +A+I   DM   MQ++A+++A  A + + V +  DIA  IKKEFD+ HG  W CIVG +F
Sbjct: 39  RAVIKSADMKDDMQKEAIEIAISAFEKYSVEK--DIAENIKKEFDKKHGATWHCIVGRNF 98

Query: 65  GSFVTHCFGCFIYFCVGNLAVLLFR 90
           GS+VTH    F+YF +   AVLLF+
Sbjct: 99  GSYVTHETNHFVYFYLDQKAVLLFK 121

[Close]

BLAST of Moc11g10830 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 80.5 bits (197), Expect = 9.5e-16
Identity = 41/83 (49.40%), Postives = 50/83 (60.24%), Query Frame = 0


Query: 12  DMLQGMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIHGPGWQCIVGTDFGSFVTHC 71
           DM   MQ  A   A   LDS +   +  +A  +KKEFD+ +GP W CIVG+ FGSFVTH 
Sbjct: 123 DMPGFMQAHAFRCARMTLDSLEKFSSKHMAFNLKKEFDKGYGPAWHCIVGSSFGSFVTHS 182

Query: 72  FGCFIYFCVGNLAVLLFRGSAGP 95
            GCFIYF +  L VLLF+    P
Sbjct: 183 TGCFIYFSMDKLYVLLFKTKVRP 205

The following BLAST results are available for this feature:

BLAST of Moc11g10830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139644.1	7.9e-57	100.00	dynein light chain LC6, flagellar outer arm [Momordica charantia]	[more]
XP_022941140.1	6.3e-46	84.68	dynein light chain 2, cytoplasmic-like [Cucurbita moschata]	[more]
KAG6607846.1	2.4e-45	83.78	hypothetical protein SDJN03_01188, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022981659.1	3.1e-45	83.78	dynein light chain 2, cytoplasmic-like [Cucurbita maxima]	[more]
XP_023525676.1	1.6e-44	81.98	dynein light chain 2, cytoplasmic-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Moc11g10830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O02414	5.2e-19	53.93	Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=10431...	[more]
Q22799	1.5e-18	50.56	Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=...	[more]
O96860	1.5e-18	51.69	Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=Cdlc2 PE...	[more]
Q39580	3.4e-18	52.94	Dynein 8 kDa light chain, flagellar outer arm OS=Chlamydomonas reinhardtii OX=30...	[more]
Q24117	3.4e-18	50.56	Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=ctp PE=1...	[more]

BLAST of Moc11g10830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CDL8	3.8e-57	100.00	Dynein light chain OS=Momordica charantia OX=3673 GN=LOC111010496 PE=3 SV=1	[more]
A0A6J1FSQ1	3.0e-46	84.68	Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111446528 PE=3 SV=1	[more]
A0A6J1J2G7	1.5e-45	83.78	Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111480715 PE=3 SV=1	[more]
A0A072TRW8	9.8e-45	80.91	Dynein light chain OS=Medicago truncatula OX=3880 GN=25502567 PE=3 SV=1	[more]
A0A1S3TIQ6	2.9e-44	81.82	Dynein light chain OS=Vigna radiata var. radiata OX=3916 GN=LOC106755918 PE=3 SV...	[more]

BLAST of Moc11g10830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27360.1	4.8e-36	74.19	Dynein light chain type 1 family protein	[more]
AT3G16120.1	8.0e-23	54.95	Dynein light chain type 1 family protein	[more]
AT1G52240.2	1.2e-21	51.06	RHO guanyl-nucleotide exchange factor 11	[more]
AT4G15930.1	7.2e-16	47.06	Dynein light chain type 1 family protein	[more]
AT5G20110.1	9.5e-16	49.40	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 1..90 e-value: 1.0E-44 score: 164.6
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 6..89 e-value: 6.9E-32 score: 109.7
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 1..97
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 1..90 e-value: 2.1E-30 score: 106.7
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 1..90
None	No IPR available	PANTHER	PTHR11886:SF70	DYNEIN LIGHT CHAIN	coord: 1..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g10830.1	Moc11g10830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0030286	dynein complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005874	microtubule
molecular_function	GO:0045505	dynein intermediate chain binding
molecular_function	GO:0051959	dynein light intermediate chain binding