Moc11g10790 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g10790
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	CCHC-type domain-containing protein
Location	chr11: 7820714 .. 7821427 (+)
RNA-Seq Expression	Moc11g10790
Synteny	Moc11g10790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATTCTTTATGAGTCCAGTGAAGATTGACGTGGAGAAATTTGACGGAATGATCAACTTTGGCTTGTGGCAAGTGCAAGTTAAGGATGTGCTGATACAATCTGAGTTACACAAGGCGTTGAAGGGAAGACCGAGTGAAGGTGCTTCGGAAAAGCTAAGCGATGATGGTGGTCCAATGGAGTCCAGTGGTGGTTCCAGCAGAGGTTCTAAGAAGTCTAGCATGAGTTATGAAGATTGGGAGGAAATGGATTTGAGAGCTGCAAGCGCGATACGAACAAGTTTGGCTAAGAATATTCTTGCGAATGTGCATAGAATTTCGACAGCCAAAGAACTTTGGGAGAAGCTCGAAGCGTTGTATCAGGCAAAGGGCATCTCAAATCGGCTGTACCTGAAGGAGCAGTTTCACACTCTGCGAATGGAGGAAGGTATGAAAATTTCAGATCATCTGAGTAATCTCAATAGCATCATCTTTGAGTTGGAGGCGATCAAAGTGAAGATAGATGACGAAGATAAAGCACTCAGGCTCATCTTATCACTTCCATCTTCTTATGAACACATGAAGCCCATCTTGATGTATGGGAAGGATACTTTGAATTTTGCTGAGGTTACTAGTAAACTCTTGTCACATGAAGATTTGGCACTGGTAGCTAGCAATTGGAAGAAAAAGAAAGACTCCGTACAAAAGAAAGCTTGTTGCTGGGGATGCGGATAG

mRNA sequence

ATGTCATTCTTTATGAGTCCAGTGAAGATTGACGTGGAGAAATTTGACGGAATGATCAACTTTGGCTTGTGGCAAGTGCAAGTTAAGGATGTGCTGATACAATCTGAGTTACACAAGGCGTTGAAGGGAAGACCGAGTGAAGGTGCTTCGGAAAAGCTAAGCGATGATGGTGGTCCAATGGAGTCCAGTGGTGGTTCCAGCAGAGGTTCTAAGAAGTCTAGCATGAGTTATGAAGATTGGGAGGAAATGGATTTGAGAGCTGCAAGCGCGATACGAACAAGTTTGGCTAAGAATATTCTTGCGAATGTGCATAGAATTTCGACAGCCAAAGAACTTTGGGAGAAGCTCGAAGCGTTGTATCAGGCAAAGGGCATCTCAAATCGGCTGTACCTGAAGGAGCAGTTTCACACTCTGCGAATGGAGGAAGGTATGAAAATTTCAGATCATCTGAGTAATCTCAATAGCATCATCTTTGAGTTGGAGGCGATCAAAGTGAAGATAGATGACGAAGATAAAGCACTCAGGCTCATCTTATCACTTCCATCTTCTTATGAACACATGAAGCCCATCTTGATGTATGGGAAGGATACTTTGAATTTTGCTGAGGTTACTAGTAAACTCTTGTCACATGAAGATTTGGCACTGGTAGCTAGCAATTGGAAGAAAAAGAAAGACTCCGTACAAAAGAAAGCTTGTTGCTGGGGATGCGGATAG

Coding sequence (CDS)

ATGTCATTCTTTATGAGTCCAGTGAAGATTGACGTGGAGAAATTTGACGGAATGATCAACTTTGGCTTGTGGCAAGTGCAAGTTAAGGATGTGCTGATACAATCTGAGTTACACAAGGCGTTGAAGGGAAGACCGAGTGAAGGTGCTTCGGAAAAGCTAAGCGATGATGGTGGTCCAATGGAGTCCAGTGGTGGTTCCAGCAGAGGTTCTAAGAAGTCTAGCATGAGTTATGAAGATTGGGAGGAAATGGATTTGAGAGCTGCAAGCGCGATACGAACAAGTTTGGCTAAGAATATTCTTGCGAATGTGCATAGAATTTCGACAGCCAAAGAACTTTGGGAGAAGCTCGAAGCGTTGTATCAGGCAAAGGGCATCTCAAATCGGCTGTACCTGAAGGAGCAGTTTCACACTCTGCGAATGGAGGAAGGTATGAAAATTTCAGATCATCTGAGTAATCTCAATAGCATCATCTTTGAGTTGGAGGCGATCAAAGTGAAGATAGATGACGAAGATAAAGCACTCAGGCTCATCTTATCACTTCCATCTTCTTATGAACACATGAAGCCCATCTTGATGTATGGGAAGGATACTTTGAATTTTGCTGAGGTTACTAGTAAACTCTTGTCACATGAAGATTTGGCACTGGTAGCTAGCAATTGGAAGAAAAAGAAAGACTCCGTACAAAAGAAAGCTTGTTGCTGGGGATGCGGATAG

Protein sequence

MSFFMSPVKIDVEKFDGMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEKLSDDGGPMESSGGSSRGSKKSSMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWEKLEALYQAKGISNRLYLKEQFHTLRMEEGMKISDHLSNLNSIIFELEAIKVKIDDEDKALRLILSLPSSYEHMKPILMYGKDTLNFAEVTSKLLSHEDLALVASNWKKKKDSVQKKACCWGCG

Homology

[Close]

BLAST of Moc11g10790 vs. NCBI nr
Match: XP_022139673.1 (uncharacterized protein LOC111010521 [Momordica charantia])

HSP 1 Score: 443.7 bits (1140), Expect = 9.7e-121
Identity = 232/249 (93.17%), Postives = 234/249 (93.98%), Query Frame = 0


Query: 1   MSFFMSPVKIDVEKFDGMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEKLSDDGGPM 60
           MSFFMSPVKIDVEKFDGMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEKLSDDGGPM
Sbjct: 295 MSFFMSPVKIDVEKFDGMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEKLSDDGGPM 354

Query: 61  ESSGGSSRGSKKSSMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWEKLEALY 120
           ESSGGSSRGSKKSSMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWEKLEALY
Sbjct: 355 ESSGGSSRGSKKSSMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWEKLEALY 414

Query: 121 QAKGISNRLYLKEQFHTLRMEEGMKISDHLSNLNSIIFELEAIKVKIDDEDKALRLILSL 180
           QAKGISNRLYLKEQFHTL+MEEGMKISDHLSNLNSIIFELEAI+VKIDDEDKALRLILSL
Sbjct: 415 QAKGISNRLYLKEQFHTLQMEEGMKISDHLSNLNSIIFELEAIEVKIDDEDKALRLILSL 474

Query: 181 PSSYEHMKPILMYGKDTLNFAEVTSKLL------------SHEDLALVASNWKKKKDSVQ 238
           P SYEHMKPILMYGKDTLNFAEVTSKLL            SHED ALV SNWKKKKDSVQ
Sbjct: 475 PXSYEHMKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALVVSNWKKKKDSVQ 534

[Close]

BLAST of Moc11g10790 vs. NCBI nr
Match: KAF5463231.1 (hypothetical protein F2P56_019161 [Juglans regia])

HSP 1 Score: 279.3 bits (713), Expect = 3.2e-71
Identity = 151/242 (62.40%), Postives = 179/242 (73.97%), Query Frame = 0


Query: 8   VKIDVEKFDGMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEKLSDDGGPMESSGGSS 67
           ++ +VEKFDG INFGLWQVQVKDVLIQS LHKALKGRP+   S   S           + 
Sbjct: 10  IRYEVEKFDGRINFGLWQVQVKDVLIQSGLHKALKGRPTPEVSSDTS----------VTD 69

Query: 68  RGSKKSSMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWEKLEALYQAKGISN 127
           +   +S MS EDWE++DLRAASAIR  LAKN+LAN+H ISTAK+LWEKLE LYQ KG+SN
Sbjct: 70  QTKSRSVMSDEDWEDLDLRAASAIRLCLAKNVLANIHGISTAKKLWEKLEELYQTKGVSN 129

Query: 128 RLYLKEQFHTLRMEEGMKISDHLSNLNSIIFELEAIKVKIDDEDKALRLILSLPSSYEHM 187
           R+YLKEQFHTL M EG  ISDHLS LN I+ ELE+I VKIDDED+ALRLI SLPSSYEHM
Sbjct: 130 RVYLKEQFHTLHMSEGTTISDHLSVLNGIVSELESIGVKIDDEDQALRLIWSLPSSYEHM 189

Query: 188 KPILMYGKDTLNFAEVTSKLLSHE------------DLALVASNWKKKKDSVQKKACCWG 238
           KPIL++GK+ + F+EVTSKL S E            +LA+V +   KKK+S++ K  CWG
Sbjct: 190 KPILIHGKEKIIFSEVTSKLFSEERRLGGGRNGPPVNLAMVVAGNGKKKNSMKMKVVCWG 241

[Close]

BLAST of Moc11g10790 vs. NCBI nr
Match: KAF5765959.1 (putative RNA-directed DNA polymerase [Helianthus annuus])

HSP 1 Score: 271.6 bits (693), Expect = 6.6e-69
Identity = 152/244 (62.30%), Postives = 176/244 (72.13%), Query Frame = 0


Query: 6   SPVKIDVEKFDGMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEKLSDDGGPMESSGG 65
           SP++ DVEK+DG INFGLWQVQVKDVLIQS LHKAL+G+P+  +S          + S G
Sbjct: 5   SPMRFDVEKYDGRINFGLWQVQVKDVLIQSGLHKALRGKPTPVSS----------KDSSG 64

Query: 66  SSRGSKKSSMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWEKLEALYQAKGI 125
           +S+         E+WE++DLRAASAIR  LAKN+LANVH ISTAK+LWEKLE LYQ KGI
Sbjct: 65  TSKDDD------EEWEDLDLRAASAIRLCLAKNVLANVHGISTAKDLWEKLEQLYQGKGI 124

Query: 126 SNRLYLKEQFHTLRMEEGMKISDHLSNLNSIIFELEAIKVKIDDEDKALRLILSLPSSYE 185
            NRLYLKEQFHTLRM+   KISDHLS LN+I+ ELEAI VK++DEDKALRLILSL SSYE
Sbjct: 125 PNRLYLKEQFHTLRMDGDTKISDHLSVLNNIVSELEAIGVKVEDEDKALRLILSLTSSYE 184

Query: 186 HMKPILMYGKDTLNFAEVTSKLLSH------------EDLALVASNWKKKKDSVQKKACC 238
           HMKPILMYGK+TL +A+VT KLLS             E   L+  N KKK    QK   C
Sbjct: 185 HMKPILMYGKETLKYADVTEKLLSEEKRLGSSGHTSSEGTVLICGNGKKKHP--QKIPVC 230

[Close]

BLAST of Moc11g10790 vs. NCBI nr
Match: KAE8717380.1 (hypothetical protein F3Y22_tig00110050pilonHSYRG00143 [Hibiscus syriacus])

HSP 1 Score: 270.0 bits (689), Expect = 1.9e-68
Identity = 150/242 (61.98%), Postives = 177/242 (73.14%), Query Frame = 0


Query: 9   KIDVEKFDGMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEKLSDDGGPMESSGGSSR 68
           + D+EKFDG INFGLWQVQVKD+LIQS L+KALKG+P+  +  K  D   P +SSG    
Sbjct: 4   RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPASLSEGKEPDK--PSDSSGDKG- 63

Query: 69  GSKKSSMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWEKLEALYQAKGISNR 128
              KS MS E+WEE+D+RAAS IR  LAKN+LANV R S+ KELWEKLE +YQAK +SNR
Sbjct: 64  ---KSKMSEEEWEELDMRAASQIRLCLAKNVLANVARWSSTKELWEKLEEMYQAKSLSNR 123

Query: 129 LYLKEQFHTLRMEEGMKISDHLSNLNSIIFELEAIKVKIDDEDKALRLILSLPSSYEHMK 188
           LYLKE+FH L+MEEG KISDHLS LN I+ ELE+I V+IDDEDKALRLI SLPSSYEHM+
Sbjct: 124 LYLKEKFHKLQMEEGTKISDHLSALNGIVSELESIGVEIDDEDKALRLIWSLPSSYEHMQ 183

Query: 189 PILMYGKDTLNFAEVTSKLLSHE-------------DLALVASNWKKKKDSVQKKACCWG 238
            +LMYGK+ +NF+EVTSKL+S E                 V  N KK K S +KK  CWG
Sbjct: 184 TVLMYGKENVNFSEVTSKLISEERRLKNGENKSSESGALSVCGNRKKYKGS-KKKIICWG 238

[Close]

BLAST of Moc11g10790 vs. NCBI nr
Match: KAF5758504.1 (putative RNA-directed DNA polymerase [Helianthus annuus])

HSP 1 Score: 270.0 bits (689), Expect = 1.9e-68
Identity = 152/244 (62.30%), Postives = 176/244 (72.13%), Query Frame = 0


Query: 6   SPVKIDVEKFDGMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEKLSDDGGPMESSGG 65
           SP++  VEK+DG INFGLWQVQVKDVLIQS LHKAL+G+P+  +S          + S G
Sbjct: 5   SPMRFVVEKYDGRINFGLWQVQVKDVLIQSGLHKALRGKPTPVSS----------KDSSG 64

Query: 66  SSRGSKKSSMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWEKLEALYQAKGI 125
           +S+         E+WE++DLRAASAIR  LAKN+LANVH ISTAK+LWEKLE LYQ KGI
Sbjct: 65  TSKDDD------EEWEDLDLRAASAIRLCLAKNVLANVHGISTAKDLWEKLEQLYQGKGI 124

Query: 126 SNRLYLKEQFHTLRMEEGMKISDHLSNLNSIIFELEAIKVKIDDEDKALRLILSLPSSYE 185
           SNRLYLKEQFHTLRM+   KISDHLS LN+I+ ELEAI VK++DEDKALRLILSL SSYE
Sbjct: 125 SNRLYLKEQFHTLRMDGDTKISDHLSVLNNIVSELEAIGVKVEDEDKALRLILSLTSSYE 184

Query: 186 HMKPILMYGKDTLNFAEVTSKLLSH------------EDLALVASNWKKKKDSVQKKACC 238
           HMKPILMYGK+TL +A+VT KLLS             E   L+  N KKK    QK   C
Sbjct: 185 HMKPILMYGKETLKYADVTEKLLSEEKRLGSSGHTSSEGTVLICGNGKKKHP--QKIPVC 230

[Close]

BLAST of Moc11g10790 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.2e-33
Identity = 80/209 (38.28%), Postives = 122/209 (58.37%), Query Frame = 0


Query: 5   MSPVKIDVEKFDGMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEKLSDDGGPMESSG 64
           MS VK +V KF+G   F  WQ +++D+LIQ  LHK L                       
Sbjct: 1   MSGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVL----------------------- 60

Query: 65  GSSRGSKKSSMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWEKLEALYQAKG 124
                 K  +M  EDW ++D RAASAIR  L+ +++ N+    TA+ +W +LE+LY +K 
Sbjct: 61  -DVDSKKPDTMKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKT 120

Query: 125 ISNRLYLKEQFHTLRMEEGMKISDHLSNLNSIIFELEAIKVKIDDEDKALRLILSLPSSY 184
           ++N+LYLK+Q + L M EG     HL+  N +I +L  + VKI++EDKA+ L+ SLPSSY
Sbjct: 121 LTNKLYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSY 180

Query: 185 EHMKPILMYGKDTLNFAEVTSKLLSHEDL 214
           +++   +++GK T+   +VTS LL +E +
Sbjct: 181 DNLATTILHGKTTIELKDVTSALLLNEKM 185

[Close]

BLAST of Moc11g10790 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 65.9 bits (159), Expect = 7.2e-10
Identity = 51/209 (24.40%), Postives = 101/209 (48.33%), Query Frame = 0


Query: 5   MSPVKIDVEKFDGMINFGLWQVQVKDVLIQSELHKALKG-RPSEGASEKLSDDGGPMESS 64
           M   K +++ FDG   + +W+ +++ +L + ++ K + G  P+E       DD       
Sbjct: 1   MDKAKRNIKPFDGE-KYAIWKFRIRALLAEQDVLKVVDGLMPNE------VDD------- 60

Query: 65  GGSSRGSKKSSMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWEKLEALYQAK 124
                           W++ +  A S I   L+ + L       TA+++ E L+A+Y+ K
Sbjct: 61  ---------------SWKKAERCAKSTIIEYLSDSFLNFATSDITARQILENLDAVYERK 120

Query: 125 GISNRLYLKEQFHTLRMEEGMKISDHLSNLNSIIFELEAIKVKIDDEDKALRLILSLPSS 184
            ++++L L+++  +L++   M +  H    + +I EL A   KI++ DK   L+++LPS 
Sbjct: 121 SLASQLALRKRLLSLKLSSEMSLLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSC 180

Query: 185 YEH-MKPILMYGKDTLNFAEVTSKLLSHE 212
           Y+  +  I    ++ L  A V ++LL  E
Sbjct: 181 YDGIITAIETLSEENLTLAFVKNRLLDQE 180

[Close]

BLAST of Moc11g10790 vs. ExPASy TrEMBL
Match: A0A6J1CG82 (uncharacterized protein LOC111010521 OS=Momordica charantia OX=3673 GN=LOC111010521 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 4.7e-121
Identity = 232/249 (93.17%), Postives = 234/249 (93.98%), Query Frame = 0


Query: 1   MSFFMSPVKIDVEKFDGMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEKLSDDGGPM 60
           MSFFMSPVKIDVEKFDGMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEKLSDDGGPM
Sbjct: 295 MSFFMSPVKIDVEKFDGMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEKLSDDGGPM 354

Query: 61  ESSGGSSRGSKKSSMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWEKLEALY 120
           ESSGGSSRGSKKSSMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWEKLEALY
Sbjct: 355 ESSGGSSRGSKKSSMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWEKLEALY 414

Query: 121 QAKGISNRLYLKEQFHTLRMEEGMKISDHLSNLNSIIFELEAIKVKIDDEDKALRLILSL 180
           QAKGISNRLYLKEQFHTL+MEEGMKISDHLSNLNSIIFELEAI+VKIDDEDKALRLILSL
Sbjct: 415 QAKGISNRLYLKEQFHTLQMEEGMKISDHLSNLNSIIFELEAIEVKIDDEDKALRLILSL 474

Query: 181 PSSYEHMKPILMYGKDTLNFAEVTSKLL------------SHEDLALVASNWKKKKDSVQ 238
           P SYEHMKPILMYGKDTLNFAEVTSKLL            SHED ALV SNWKKKKDSVQ
Sbjct: 475 PXSYEHMKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALVVSNWKKKKDSVQ 534

[Close]

BLAST of Moc11g10790 vs. ExPASy TrEMBL
Match: A0A6A3BK59 (CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110050pilonHSYRG00143 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 9.3e-69
Identity = 150/242 (61.98%), Postives = 177/242 (73.14%), Query Frame = 0


Query: 9   KIDVEKFDGMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEKLSDDGGPMESSGGSSR 68
           + D+EKFDG INFGLWQVQVKD+LIQS L+KALKG+P+  +  K  D   P +SSG    
Sbjct: 4   RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPASLSEGKEPDK--PSDSSGDKG- 63

Query: 69  GSKKSSMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWEKLEALYQAKGISNR 128
              KS MS E+WEE+D+RAAS IR  LAKN+LANV R S+ KELWEKLE +YQAK +SNR
Sbjct: 64  ---KSKMSEEEWEELDMRAASQIRLCLAKNVLANVARWSSTKELWEKLEEMYQAKSLSNR 123

Query: 129 LYLKEQFHTLRMEEGMKISDHLSNLNSIIFELEAIKVKIDDEDKALRLILSLPSSYEHMK 188
           LYLKE+FH L+MEEG KISDHLS LN I+ ELE+I V+IDDEDKALRLI SLPSSYEHM+
Sbjct: 124 LYLKEKFHKLQMEEGTKISDHLSALNGIVSELESIGVEIDDEDKALRLIWSLPSSYEHMQ 183

Query: 189 PILMYGKDTLNFAEVTSKLLSHE-------------DLALVASNWKKKKDSVQKKACCWG 238
            +LMYGK+ +NF+EVTSKL+S E                 V  N KK K S +KK  CWG
Sbjct: 184 TVLMYGKENVNFSEVTSKLISEERRLKNGENKSSESGALSVCGNRKKYKGS-KKKIICWG 238

[Close]

BLAST of Moc11g10790 vs. ExPASy TrEMBL
Match: A0A6A3CWI3 (CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00001713pilonHSYRG00162 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.6e-68
Identity = 150/242 (61.98%), Postives = 176/242 (72.73%), Query Frame = 0


Query: 9   KIDVEKFDGMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEKLSDDGGPMESSGGSSR 68
           + D+EKFDG INFGLWQVQVKD+LIQS L+KALKG+P+  +  K  D   P +SSG    
Sbjct: 4   RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPASLSEGKEPDK--PSDSSGDKG- 63

Query: 69  GSKKSSMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWEKLEALYQAKGISNR 128
              KS MS E+WEE+D+RAAS IR  LAKN+LANV R S+ KELWEKLE +YQAK +SNR
Sbjct: 64  ---KSKMSEEEWEELDMRAASQIRLCLAKNVLANVARWSSTKELWEKLEEMYQAKSLSNR 123

Query: 129 LYLKEQFHTLRMEEGMKISDHLSNLNSIIFELEAIKVKIDDEDKALRLILSLPSSYEHMK 188
           LYLKE+FH L+MEEG KISDHLS LN I+ ELE+I V IDDEDKALRLI SLPSSYEHM+
Sbjct: 124 LYLKEKFHKLQMEEGTKISDHLSALNGIVSELESIGVDIDDEDKALRLIWSLPSSYEHMQ 183

Query: 189 PILMYGKDTLNFAEVTSKLLSHE-------------DLALVASNWKKKKDSVQKKACCWG 238
            +LMYGK+ +NF+EVTSKL+S E                 V  N KK K S +KK  CWG
Sbjct: 184 TVLMYGKENVNFSEVTSKLISEERRLKNGENKSSESGALSVCGNRKKYKGS-KKKIICWG 238

[Close]

BLAST of Moc11g10790 vs. ExPASy TrEMBL
Match: A0A6A2YS90 (Transcription initiation factor IIA subunit 2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111273pilonHSYRG00172 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 7.9e-68
Identity = 149/242 (61.57%), Postives = 176/242 (72.73%), Query Frame = 0


Query: 9   KIDVEKFDGMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEKLSDDGGPMESSGGSSR 68
           + D+EKFDG INFGLWQVQVKD+LIQS L+KALKG+P+  +  K  D   P +SSG    
Sbjct: 90  RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPASLSEGKEPDK--PSDSSGDKG- 149

Query: 69  GSKKSSMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWEKLEALYQAKGISNR 128
              KS MS E+WEE+D+RAAS IR  LAKN+LANV R S+ KELWEKLE +YQAK +SNR
Sbjct: 150 ---KSKMSEEEWEELDMRAASQIRLCLAKNVLANVARWSSTKELWEKLEEMYQAKSLSNR 209

Query: 129 LYLKEQFHTLRMEEGMKISDHLSNLNSIIFELEAIKVKIDDEDKALRLILSLPSSYEHMK 188
           LYLKE+FH L+MEEG KISDHLS LN I+ ELE+I V+IDDEDKALRLI SL SSYEHM+
Sbjct: 210 LYLKEKFHKLQMEEGTKISDHLSALNGIVSELESIGVEIDDEDKALRLIWSLSSSYEHMQ 269

Query: 189 PILMYGKDTLNFAEVTSKLLSHE-------------DLALVASNWKKKKDSVQKKACCWG 238
            +LMYGK+ +NF+EVTSKL+S E                 V  N KK K S +KK  CWG
Sbjct: 270 TVLMYGKENVNFSEVTSKLISEERRLKNGENKSSESGALSVCGNRKKYKGS-KKKIICWG 324

[Close]

BLAST of Moc11g10790 vs. ExPASy TrEMBL
Match: A0A6A3DA47 (CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00000132pilonHSYRG00093 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 7.9e-68
Identity = 147/241 (61.00%), Postives = 175/241 (72.61%), Query Frame = 0


Query: 9   KIDVEKFDGMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEKLSDDGGPMESSGGSSR 68
           + D+EKFDG INFGLWQVQVKD+LIQS L+KALKG+P+     K  D   P +SSG    
Sbjct: 4   RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPASLFEGKEPDK--PSDSSGDKG- 63

Query: 69  GSKKSSMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWEKLEALYQAKGISNR 128
              KS MS E+WEE+D+RAAS IR  LAKN+LANV R S+ KELWEKLE +YQAK +SNR
Sbjct: 64  ---KSKMSEEEWEELDMRAASQIRLCLAKNVLANVARWSSTKELWEKLEEMYQAKSLSNR 123

Query: 129 LYLKEQFHTLRMEEGMKISDHLSNLNSIIFELEAIKVKIDDEDKALRLILSLPSSYEHMK 188
           LYLKE+FH L+MEEG KISDHLS LN I+ ELE+I V+IDDEDKALRLI SLPSSYEHM+
Sbjct: 124 LYLKEKFHKLQMEEGTKISDHLSALNGIVSELESIGVEIDDEDKALRLIWSLPSSYEHMQ 183

Query: 189 PILMYGKDTLNFAEVTSKLLSH------------EDLALVASNWKKKKDSVQKKACCWGC 238
            +LMYGK+ +NF+EVTSKL+S             E  AL     +KK    ++K  CWGC
Sbjct: 184 TVLMYGKENVNFSEVTSKLISEERRLKNGENKSSESGALSVFGNRKKYKGSKRKIICWGC 238

The following BLAST results are available for this feature:

BLAST of Moc11g10790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139673.1	9.7e-121	93.17	uncharacterized protein LOC111010521 [Momordica charantia]	[more]
KAF5463231.1	3.2e-71	62.40	hypothetical protein F2P56_019161 [Juglans regia]	[more]
KAF5765959.1	6.6e-69	62.30	putative RNA-directed DNA polymerase [Helianthus annuus]	[more]
KAE8717380.1	1.9e-68	61.98	hypothetical protein F3Y22_tig00110050pilonHSYRG00143 [Hibiscus syriacus]	[more]
KAF5758504.1	1.9e-68	62.30	putative RNA-directed DNA polymerase [Helianthus annuus]	[more]

BLAST of Moc11g10790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.2e-33	38.28	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	7.2e-10	24.40	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Moc11g10790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CG82	4.7e-121	93.17	uncharacterized protein LOC111010521 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6A3BK59	9.3e-69	61.98	CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig0...	[more]
A0A6A3CWI3	1.6e-68	61.98	CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig0...	[more]
A0A6A2YS90	7.9e-68	61.57	Transcription initiation factor IIA subunit 2 OS=Hibiscus syriacus OX=106335 GN=...	[more]
A0A6A3DA47	7.9e-68	61.00	CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig0...	[more]

BLAST of Moc11g10790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 80..212 e-value: 2.0E-35 score: 121.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..73
None	No IPR available	PANTHER	PTHR34676	FAMILY NOT NAMED	coord: 5..211
None	No IPR available	PANTHER	PTHR34676:SF6	SUBFAMILY NOT NAMED	coord: 5..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g10790.1	Moc11g10790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044271	cellular nitrogen compound biosynthetic process
biological_process	GO:0044267	cellular protein metabolic process
biological_process	GO:0010467	gene expression
biological_process	GO:0009059	macromolecule biosynthetic process
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0008270	zinc ion binding