Moc11g09010 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g09010
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	60S ribosomal protein L27
Location	chr11: 6446741 .. 6448979 (+)
RNA-Seq Expression	Moc11g09010
Synteny	Moc11g09010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAACCGCAACCATGTTCCGATGGATTGATATGATAATCACCTTACCAAAGAGGAGGTCATTGAGGGAATCCTCGCGGTTATCAAGTGTCATCCCAAAGTGGATCCGTCCAAGGTATTCGATCTTATCACTCATTTTCACTTTCGTTTTCCAGTTGATTGAGTTGGTTGGAAAAAAAATAACTAAAAAAGTTGAATATTCGATCAAACAATCTAACTAAATATAAGAAAACACAATACATTGACTAAAGGAGAAAATTTATCTATCGAAAGAGAAATAAAACACAAGTTTTGATGAATAAAAGTTGGGAGAAGGAGTAAGAAAAAACTCTTTATATACTCGTAGAAAATAAAAAGTTACGAACCTTTTTAAATTCCTTATTAATTATAATTCAAAATAAGTTATAACTTATTAACATAGATATAAAGAGGCAAAACTCTCTATATTCTAACTCTTTATATCCTAACCTTTAAAAGGGAAAGTTTATTAGAAAGAGAAAATTAATTTGACAAATGTAAAATTGGTAATGATGGAGATTAAATATTTTTAAAGAAATGAAAAAAAAAGGAAAGTAGCGTGGGAGGGAGAGAAAGGGGAGCGAGGGAGAAAATTTTATATTTAAATGACAAAATTATCCTCAAAATATCTATGAGAATGTTGAAATTAAAAGGACAAAATAGAGAGAAAAAGTTTCTCCCTATACTCCCTTTTATATATAGATTATAATTTGTATCGACAATTAATAATTTTGATCATCATTCCATTTAATTATCAATATAATTAATTACCACCGTTTAATAATACAAATAAACTAAATTTTTACCTAACTTCAGCTTATTTTTTTTATTACAATAAGTGAGATGAGAATTCGAACTCATGATCTTTTGCCAAAGATAGATGTTGGTAACTTGAGCTTAATTAAGATATATATCTCTGCATATTATATTTAAAAAATAAGCTAAAGTTATTTAGAGCAATGTAGACTATTGTTGATGTGAAGTTTCTCCAAATTTTAGATACGAAAGAGATCGATAAGACCTGCAAAACAGAATAGCAATAAGACCGGTGTGGCTCTTGCCACACAGACTTCGATGCTTAAGTTAGACTTTGGATAGTCGAGAATAAAGAGTCGGGTAATTGATCGTGTTTAATCCTAATACCTTTAGGAATTATCAGAGTCGAGTCCTACTGTGCCTAGGAGATCTGGACTCTTGGACCTGTGTGTTTAGTATTAGGCCCAATATCAAATCTAAGGTCGAAACAACACAAATTTGGATGAGTAGGGGTCGGGAGAGAATCGTTGGAGTTCTCAACCATTGGTCGAGAAGGTCTCGACGCCGACCTCGAGACATCTGTGGCTGGCTCGGGTCGCCGAATCCGCTCCTCTCTCAGCCCAATTCTGTCTTTCATTGCTATATCTTTTTATCTTCCCCTAACAAGTATTAACATAATAAAAAAGCAACAAAATATAAAAAAACAAAATATCAACAAAAAGTGATTAACATGAATAAAAAATTAATATTAACAAATTTTAAATTATTTAAAATGATTAAAGATTTATTTGTTAATTTAAATATTTGTTATCTTTATAATTATTTTTAAAATATGCATCAACGTTATATTTTATCAATATTTTCAACCAGGTTTAAAACATTGAATGGTCAATTGAAAAATAAATAAATGGTCTCTGAAATAATGAGCCCATTGAGGCCCATTATAAATAATTAGGGCTTCGGTTTTACAGGTTATAAATCAGCTGCTCTGCTCCTAGAGTTTATGTTGTCGTCGTCGACAGATTGAGGGGAATTTTTTCGCGATCGGAACTGAAAATGGTCAAATTTATCAAGCCGAACAAGGCGGTCGTTGTTCTACAAGGCCGATTCGCCGGCCGGAAGGCTGTGATAGTGCGCAACTTCGATGATGGAACCCGGGATCGACCCTACGGCCATTGTCTGGTGGCGGGGATCAGCAAGTACCCGAGTAGGGTGATTCGCAAAGATTCGACCAAGAAGACGGCGAAGAAATCGAGAGTGAAGGCCTTCATCAAGCTTGTGAACTACCAGCACCTCATGCCGACGAGGTACACACTCGACGTCGATCTCAAGGATGTGGTTAATGTGGATTGTTTGCAGTCGAAGGGCACGAAGGTTGCGGCGGCGAAGGAGATCAAGAAGAGGATGGAGGAGAGGTTTAAGACTGGGAAGAATAGGTGGTTTTTTACCAAGCTTAGGTTCTGA

mRNA sequence

ATGCCAACCGCAACCATGTTCCGATGGATTGATATGATAATCACCTTACCAAAGAGGAGGTCATTGAGGGAATCCTCGCGGTTATCAAGTGTCATCCCAAAGTGGATCCGTCCAAGATTGAGGGGAATTTTTTCGCGATCGGAACTGAAAATGGTCAAATTTATCAAGCCGAACAAGGCGGTCGTTGTTCTACAAGGCCGATTCGCCGGCCGGAAGGCTGTGATAGTGCGCAACTTCGATGATGGAACCCGGGATCGACCCTACGGCCATTGTCTGGTGGCGGGGATCAGCAAGTACCCGAGTAGGGTGATTCGCAAAGATTCGACCAAGAAGACGGCGAAGAAATCGAGAGTGAAGGCCTTCATCAAGCTTGTGAACTACCAGCACCTCATGCCGACGAGGTACACACTCGACGTCGATCTCAAGGATGTGGTTAATGTGGATTGTTTGCAGTCGAAGGGCACGAAGGTTGCGGCGGCGAAGGAGATCAAGAAGAGGATGGAGGAGAGGTTTAAGACTGGGAAGAATAGGTGGTTTTTTACCAAGCTTAGGTTCTGA

Coding sequence (CDS)

ATGCCAACCGCAACCATGTTCCGATGGATTGATATGATAATCACCTTACCAAAGAGGAGGTCATTGAGGGAATCCTCGCGGTTATCAAGTGTCATCCCAAAGTGGATCCGTCCAAGATTGAGGGGAATTTTTTCGCGATCGGAACTGAAAATGGTCAAATTTATCAAGCCGAACAAGGCGGTCGTTGTTCTACAAGGCCGATTCGCCGGCCGGAAGGCTGTGATAGTGCGCAACTTCGATGATGGAACCCGGGATCGACCCTACGGCCATTGTCTGGTGGCGGGGATCAGCAAGTACCCGAGTAGGGTGATTCGCAAAGATTCGACCAAGAAGACGGCGAAGAAATCGAGAGTGAAGGCCTTCATCAAGCTTGTGAACTACCAGCACCTCATGCCGACGAGGTACACACTCGACGTCGATCTCAAGGATGTGGTTAATGTGGATTGTTTGCAGTCGAAGGGCACGAAGGTTGCGGCGGCGAAGGAGATCAAGAAGAGGATGGAGGAGAGGTTTAAGACTGGGAAGAATAGGTGGTTTTTTACCAAGCTTAGGTTCTGA

Protein sequence

MPTATMFRWIDMIITLPKRRSLRESSRLSSVIPKWIRPRLRGIFSRSELKMVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSRVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF

Homology

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BLAST of Moc11g09010 vs. NCBI nr
Match: XP_022143316.1 (60S ribosomal protein L27-like [Momordica charantia])

HSP 1 Score: 268.9 bits (686), Expect = 3.4e-68
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 51  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSRVIRKDSTK 110
           MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSRVIRKDSTK
Sbjct: 1   MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSRVIRKDSTK 60

Query: 111 KTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGTKVAAAKEIKKRMEER 170
           KTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGTKVAAAKEIKKRMEER
Sbjct: 61  KTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGTKVAAAKEIKKRMEER 120

Query: 171 FKTGKNRWFFTKLRF 186
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

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BLAST of Moc11g09010 vs. NCBI nr
Match: XP_022981139.1 (60S ribosomal protein L27-like [Cucurbita maxima])

HSP 1 Score: 258.5 bits (659), Expect = 4.5e-65
Identity = 126/135 (93.33%), Postives = 133/135 (98.52%), Query Frame = 0


Query: 51  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSRVIRKDSTK 110
           MVKFIKPNKAV+VLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAG+ KYPS+VIRKDSTK
Sbjct: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGMKKYPSKVIRKDSTK 60

Query: 111 KTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGTKVAAAKEIKKRMEER 170
           KTAKKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVN DCLQSKG+KVAAAKEIKKR+E+R
Sbjct: 61  KTAKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNADCLQSKGSKVAAAKEIKKRLEDR 120

Query: 171 FKTGKNRWFFTKLRF 186
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

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BLAST of Moc11g09010 vs. NCBI nr
Match: XP_023523697.1 (60S ribosomal protein L27-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.9 bits (655), Expect = 1.3e-64
Identity = 125/135 (92.59%), Postives = 132/135 (97.78%), Query Frame = 0


Query: 51  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSRVIRKDSTK 110
           MVKFIKPNKAV+VLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAG+ KYPS+VIRKDSTK
Sbjct: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGMKKYPSKVIRKDSTK 60

Query: 111 KTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGTKVAAAKEIKKRMEER 170
           KTAKKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVN DCLQSKG+KV AAKEIKKR+E+R
Sbjct: 61  KTAKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNADCLQSKGSKVVAAKEIKKRLEDR 120

Query: 171 FKTGKNRWFFTKLRF 186
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

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BLAST of Moc11g09010 vs. NCBI nr
Match: KAG6608000.1 (60S ribosomal protein L27-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 255.8 bits (652), Expect = 2.9e-64
Identity = 125/136 (91.91%), Postives = 133/136 (97.79%), Query Frame = 0


Query: 50  KMVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSRVIRKDST 109
           KMVKFIKPNKAV+VLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAG+ KYPS+VIRKDST
Sbjct: 77  KMVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGMKKYPSKVIRKDST 136

Query: 110 KKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGTKVAAAKEIKKRMEE 169
           KKTAKKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVN DCLQSK +KVAA+KEIKKR+E+
Sbjct: 137 KKTAKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNADCLQSKVSKVAASKEIKKRLED 196

Query: 170 RFKTGKNRWFFTKLRF 186
           RFKTGKNRWFFTKLRF
Sbjct: 197 RFKTGKNRWFFTKLRF 212

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BLAST of Moc11g09010 vs. NCBI nr
Match: XP_022940098.1 (60S ribosomal protein L27-3-like [Cucurbita moschata])

HSP 1 Score: 255.4 bits (651), Expect = 3.8e-64
Identity = 125/135 (92.59%), Postives = 133/135 (98.52%), Query Frame = 0


Query: 51  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSRVIRKDSTK 110
           MVKFIKPNKAV+VLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAG+ KYPS+VIRKDSTK
Sbjct: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGMKKYPSKVIRKDSTK 60

Query: 111 KTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGTKVAAAKEIKKRMEER 170
           KTAKKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVNVDCLQSK +KVAA+KEIKKR+E+R
Sbjct: 61  KTAKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120

Query: 171 FKTGKNRWFFTKLRF 186
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

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BLAST of Moc11g09010 vs. ExPASy Swiss-Prot
Match: P51419 (60S ribosomal protein L27-3 OS=Arabidopsis thaliana OX=3702 GN=RPL27C PE=2 SV=2)

HSP 1 Score: 225.3 bits (573), Expect = 5.6e-58
Identity = 108/135 (80.00%), Postives = 122/135 (90.37%), Query Frame = 0


Query: 51  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSRVIRKDSTK 110
           MVKF+K NKAV++LQGR+AG+KAVI+++FDDG RDRPYGHCLVAG+ KYPS+VIRKDS K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 111 KTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGTKVAAAKEIKKRMEER 170
           KTAKKSRVK FIKLVNYQHLMPTRYTLDVDLK+V  +D LQSK  KVAA KE K ++EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEER 120

Query: 171 FKTGKNRWFFTKLRF 186
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

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BLAST of Moc11g09010 vs. ExPASy Swiss-Prot
Match: Q05462 (60S ribosomal protein L27 OS=Pisum sativum OX=3888 GN=RPL27 PE=2 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 5.6e-58
Identity = 109/135 (80.74%), Postives = 122/135 (90.37%), Query Frame = 0


Query: 51  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSRVIRKDSTK 110
           MVKF+KPNKAV++LQGR+AG+KAVIV+ FDDGTR++PYGHCLVAGI K+PS+VI+KDS K
Sbjct: 1   MVKFLKPNKAVILLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKFPSKVIKKDSAK 60

Query: 111 KTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGTKVAAAKEIKKRMEER 170
           KTAKKSRVKAF+KLVNYQHLMPTRYTLDVDLKD V  D LQSK  KV A KE KK +EER
Sbjct: 61  KTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKSLEER 120

Query: 171 FKTGKNRWFFTKLRF 186
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc11g09010 vs. ExPASy Swiss-Prot
Match: Q8LCL3 (60S ribosomal protein L27-2 OS=Arabidopsis thaliana OX=3702 GN=RPL27B PE=2 SV=2)

HSP 1 Score: 218.4 bits (555), Expect = 6.8e-56
Identity = 105/135 (77.78%), Postives = 120/135 (88.89%), Query Frame = 0


Query: 51  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSRVIRKDSTK 110
           MVKF+K NKAV++LQGR+AG+KAVI+++FDDGT DR YGHCLVAG+ KYPS+VIRKDS K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 111 KTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGTKVAAAKEIKKRMEER 170
           KTAKKSRVK FIKLVNYQHLMPTRYTLDVDLK+V  +D L+SK  KV A KE K ++EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEER 120

Query: 171 FKTGKNRWFFTKLRF 186
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc11g09010 vs. ExPASy Swiss-Prot
Match: P41101 (60S ribosomal protein L27 OS=Solanum tuberosum OX=4113 GN=RPL27 PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 3.5e-52
Identity = 104/139 (74.82%), Postives = 117/139 (84.17%), Query Frame = 0


Query: 51  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSRVIRKDSTK 110
           M KF+KPNKAV++LQG++AGRKAVIVR FD+GTRDRPYGHCLVAGIS+YP +VIRKDS K
Sbjct: 1   MEKFLKPNKAVILLQGKYAGRKAVIVRAFDEGTRDRPYGHCLVAGISRYPKKVIRKDSAK 60

Query: 111 KTAKKSRVKAFIKLVNYQHLMPTRYTLDVDL----KDVVNVDCLQSKGTKVAAAKEIKKR 170
           K  KKSRVKAFIKLVNY H+MPTRYTLD DL    KDVVN D LQ++  KV  A+  K R
Sbjct: 61  KAGKKSRVKAFIKLVNYNHIMPTRYTLDEDLKDVVKDVVNADVLQARDKKV-TARRTKAR 120

Query: 171 MEERFKTGKNRWFFTKLRF 186
           + ERFKTGKNRWFFTKLRF
Sbjct: 121 LAERFKTGKNRWFFTKLRF 138

[Close]

BLAST of Moc11g09010 vs. ExPASy Swiss-Prot
Match: Q9SKX8 (60S ribosomal protein L27-1 OS=Arabidopsis thaliana OX=3702 GN=RPL27A PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 6.0e-52
Identity = 97/135 (71.85%), Postives = 116/135 (85.93%), Query Frame = 0


Query: 51  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSRVIRKDSTK 110
           MVK +KP KAV++LQGR+ G+KAVIV++FDDGT ++ YGHCLVAG+ KYPS+VIRKDS K
Sbjct: 1   MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 111 KTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGTKVAAAKEIKKRMEER 170
           KTAKKSRVK F K++NYQH+MPTRYTLD+DLK+VV+ D + SK  KV A KE K + EER
Sbjct: 61  KTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEER 120

Query: 171 FKTGKNRWFFTKLRF 186
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc11g09010 vs. ExPASy TrEMBL
Match: A0A6J1CPX4 (60S ribosomal protein L27 OS=Momordica charantia OX=3673 GN=LOC111013189 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.6e-68
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 51  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSRVIRKDSTK 110
           MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSRVIRKDSTK
Sbjct: 1   MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSRVIRKDSTK 60

Query: 111 KTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGTKVAAAKEIKKRMEER 170
           KTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGTKVAAAKEIKKRMEER
Sbjct: 61  KTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGTKVAAAKEIKKRMEER 120

Query: 171 FKTGKNRWFFTKLRF 186
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc11g09010 vs. ExPASy TrEMBL
Match: A0A6J1J143 (60S ribosomal protein L27 OS=Cucurbita maxima OX=3661 GN=LOC111480374 PE=3 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.2e-65
Identity = 126/135 (93.33%), Postives = 133/135 (98.52%), Query Frame = 0


Query: 51  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSRVIRKDSTK 110
           MVKFIKPNKAV+VLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAG+ KYPS+VIRKDSTK
Sbjct: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGMKKYPSKVIRKDSTK 60

Query: 111 KTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGTKVAAAKEIKKRMEER 170
           KTAKKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVN DCLQSKG+KVAAAKEIKKR+E+R
Sbjct: 61  KTAKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNADCLQSKGSKVAAAKEIKKRLEDR 120

Query: 171 FKTGKNRWFFTKLRF 186
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc11g09010 vs. ExPASy TrEMBL
Match: A0A6J1FNC2 (60S ribosomal protein L27 OS=Cucurbita moschata OX=3662 GN=LOC111445816 PE=3 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.9e-64
Identity = 125/135 (92.59%), Postives = 133/135 (98.52%), Query Frame = 0


Query: 51  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSRVIRKDSTK 110
           MVKFIKPNKAV+VLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAG+ KYPS+VIRKDSTK
Sbjct: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGMKKYPSKVIRKDSTK 60

Query: 111 KTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGTKVAAAKEIKKRMEER 170
           KTAKKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVNVDCLQSK +KVAA+KEIKKR+E+R
Sbjct: 61  KTAKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120

Query: 171 FKTGKNRWFFTKLRF 186
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc11g09010 vs. ExPASy TrEMBL
Match: A0A5A7SSA5 (60S ribosomal protein L27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003380 PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.3e-62
Identity = 122/135 (90.37%), Postives = 131/135 (97.04%), Query Frame = 0


Query: 51  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSRVIRKDSTK 110
           MVKFIKPNKAV+VLQGRFAGRKAVIVRNFD+GTRDRPYGHCLVAG+ KYPS+VIRKDS K
Sbjct: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60

Query: 111 KTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGTKVAAAKEIKKRMEER 170
           KT KKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVNVDCLQSK +KVAA+KEIKKR+E+R
Sbjct: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120

Query: 171 FKTGKNRWFFTKLRF 186
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc11g09010 vs. ExPASy TrEMBL
Match: A0A1S3CNL3 (60S ribosomal protein L27 OS=Cucumis melo OX=3656 GN=LOC103502503 PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.3e-62
Identity = 122/135 (90.37%), Postives = 131/135 (97.04%), Query Frame = 0


Query: 51  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSRVIRKDSTK 110
           MVKFIKPNKAV+VLQGRFAGRKAVIVRNFD+GTRDRPYGHCLVAG+ KYPS+VIRKDS K
Sbjct: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60

Query: 111 KTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGTKVAAAKEIKKRMEER 170
           KT KKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVNVDCLQSK +KVAA+KEIKKR+E+R
Sbjct: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120

Query: 171 FKTGKNRWFFTKLRF 186
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc11g09010 vs. TAIR 10
Match: AT4G15000.1 (Ribosomal L27e protein family )

HSP 1 Score: 225.3 bits (573), Expect = 4.0e-59
Identity = 108/135 (80.00%), Postives = 122/135 (90.37%), Query Frame = 0


Query: 51  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSRVIRKDSTK 110
           MVKF+K NKAV++LQGR+AG+KAVI+++FDDG RDRPYGHCLVAG+ KYPS+VIRKDS K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 111 KTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGTKVAAAKEIKKRMEER 170
           KTAKKSRVK FIKLVNYQHLMPTRYTLDVDLK+V  +D LQSK  KVAA KE K ++EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEER 120

Query: 171 FKTGKNRWFFTKLRF 186
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc11g09010 vs. TAIR 10
Match: AT3G22230.1 (Ribosomal L27e protein family )

HSP 1 Score: 218.4 bits (555), Expect = 4.8e-57
Identity = 105/135 (77.78%), Postives = 120/135 (88.89%), Query Frame = 0


Query: 51  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSRVIRKDSTK 110
           MVKF+K NKAV++LQGR+AG+KAVI+++FDDGT DR YGHCLVAG+ KYPS+VIRKDS K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 111 KTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGTKVAAAKEIKKRMEER 170
           KTAKKSRVK FIKLVNYQHLMPTRYTLDVDLK+V  +D L+SK  KV A KE K ++EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEER 120

Query: 171 FKTGKNRWFFTKLRF 186
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc11g09010 vs. TAIR 10
Match: AT2G32220.1 (Ribosomal L27e protein family )

HSP 1 Score: 205.3 bits (521), Expect = 4.2e-53
Identity = 97/135 (71.85%), Postives = 116/135 (85.93%), Query Frame = 0


Query: 51  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSRVIRKDSTK 110
           MVK +KP KAV++LQGR+ G+KAVIV++FDDGT ++ YGHCLVAG+ KYPS+VIRKDS K
Sbjct: 1   MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 111 KTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGTKVAAAKEIKKRMEER 170
           KTAKKSRVK F K++NYQH+MPTRYTLD+DLK+VV+ D + SK  KV A KE K + EER
Sbjct: 61  KTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEER 120

Query: 171 FKTGKNRWFFTKLRF 186
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Moc11g09010 vs. TAIR 10
Match: AT4G15000.2 (Ribosomal L27e protein family )

HSP 1 Score: 199.9 bits (507), Expect = 1.8e-51
Identity = 96/123 (78.05%), Postives = 110/123 (89.43%), Query Frame = 0


Query: 51  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSRVIRKDSTK 110
           MVKF+K NKAV++LQGR+AG+KAVI+++FDDG RDRPYGHCLVAG+ KYPS+VIRKDS K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 111 KTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGTKVAAAKEIKKRMEER 170
           KTAKKSRVK FIKLVNYQHLMPTRYTLDVDLK+V  +D LQSK  KVAA KE K ++EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEER 120

Query: 171 FKT 174
           FKT
Sbjct: 121 FKT 123

The following BLAST results are available for this feature:

BLAST of Moc11g09010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143316.1	3.4e-68	100.00	60S ribosomal protein L27-like [Momordica charantia]	[more]
XP_022981139.1	4.5e-65	93.33	60S ribosomal protein L27-like [Cucurbita maxima]	[more]
XP_023523697.1	1.3e-64	92.59	60S ribosomal protein L27-like [Cucurbita pepo subsp. pepo]	[more]
KAG6608000.1	2.9e-64	91.91	60S ribosomal protein L27-3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022940098.1	3.8e-64	92.59	60S ribosomal protein L27-3-like [Cucurbita moschata]	[more]

BLAST of Moc11g09010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P51419	5.6e-58	80.00	60S ribosomal protein L27-3 OS=Arabidopsis thaliana OX=3702 GN=RPL27C PE=2 SV=2	[more]
Q05462	5.6e-58	80.74	60S ribosomal protein L27 OS=Pisum sativum OX=3888 GN=RPL27 PE=2 SV=1	[more]
Q8LCL3	6.8e-56	77.78	60S ribosomal protein L27-2 OS=Arabidopsis thaliana OX=3702 GN=RPL27B PE=2 SV=2	[more]
P41101	3.5e-52	74.82	60S ribosomal protein L27 OS=Solanum tuberosum OX=4113 GN=RPL27 PE=2 SV=1	[more]
Q9SKX8	6.0e-52	71.85	60S ribosomal protein L27-1 OS=Arabidopsis thaliana OX=3702 GN=RPL27A PE=2 SV=1	[more]

BLAST of Moc11g09010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CPX4	1.6e-68	100.00	60S ribosomal protein L27 OS=Momordica charantia OX=3673 GN=LOC111013189 PE=3 SV...	[more]
A0A6J1J143	2.2e-65	93.33	60S ribosomal protein L27 OS=Cucurbita maxima OX=3661 GN=LOC111480374 PE=3 SV=1	[more]
A0A6J1FNC2	1.9e-64	92.59	60S ribosomal protein L27 OS=Cucurbita moschata OX=3662 GN=LOC111445816 PE=3 SV=...	[more]
A0A5A7SSA5	1.3e-62	90.37	60S ribosomal protein L27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3CNL3	1.3e-62	90.37	60S ribosomal protein L27 OS=Cucumis melo OX=3656 GN=LOC103502503 PE=3 SV=1	[more]

BLAST of Moc11g09010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15000.1	4.0e-59	80.00	Ribosomal L27e protein family	[more]
AT3G22230.1	4.8e-57	77.78	Ribosomal L27e protein family	[more]
AT2G32220.1	4.2e-53	71.85	Ribosomal L27e protein family	[more]
AT4G15000.2	1.8e-51	78.05	Ribosomal L27e protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005824	KOW	SMART	SM00739	kow_9	coord: 54..81 e-value: 0.0046 score: 26.2
IPR001141	Ribosomal protein L27e	PFAM	PF01777	Ribosomal_L27e	coord: 102..185 e-value: 7.0E-31 score: 106.4
IPR001141	Ribosomal protein L27e	PANTHER	PTHR10497	60S RIBOSOMAL PROTEIN L27	coord: 51..185
IPR038655	Ribosomal protein L27e superfamily	GENE3D	2.30.30.770		coord: 51..185 e-value: 1.2E-59 score: 202.3
None	No IPR available	PANTHER	PTHR10497:SF16	60S RIBOSOMAL PROTEIN L27	coord: 51..185
IPR018262	Ribosomal protein L27e, conserved site	PROSITE	PS01107	RIBOSOMAL_L27E	coord: 174..185
IPR041991	Eukaryotic Ribosomal Protein L27, KOW domain	CDD	cd06090	KOW_RPL27	coord: 56..138 e-value: 2.02269E-43 score: 137.7
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 52..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g09010.1	Moc11g09010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome