Moc11g08720 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g08720
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	60S ribosomal protein L18a
Location	chr11: 6189271 .. 6192229 (-)
RNA-Seq Expression	Moc11g08720
Synteny	Moc11g08720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCACGTTCAGAGTAAGAATCTGCTCCCATGAACACCCAAATCTCCTCGAATCGGATTAGATTTTGCATTATTTTTGCAATATTTTTCTTTCTGCTAAGAATGCTTTTGCTTTATATGATTATCGTTTTTGTTCATTAGATTCACTTGAATTTTCTCCCTCTAAATCCCACTTTAACTTGCAACGCTTTGATCTGTTTTGAATTTTGTTCTCTCTCAGTTTCACCAGTACCAGGTCGTGGGGAGGGCGCTTCCTTCTGAAGCGGATGAGCATCCCAAGATCTACCGGATGAAGCTCTGGGCTACCAACGAGGTCCGTGCCAAATCCAAGTTCTGGTATGTTACTGTTCTGTTCGTCGACATTTCTTTAACGGGGTTCGAACAATTATGCTTATCTTGATCCTATACAATAGCCTTTGCAGTTACATAATAAGAGGTTTATTAGTGAATTCAGTATTGTCAATGTGATTCTTTCTACAAATTCAGGAGGCGGTTTGAATAATTATGATTATCTTGATCCTTTAGTCCTAGTTCTTATTGTTACATAGTAAGGATTTCTAGTGGATCTAGTGTTTTCAATGTGATACTTTCTGCAAATTTTGCAGGGGGTGATTATGCTTATCTTGATCCTATAGTGAATAGTCCTAATTCATTAGTTGGTATAGTTACACAGCTAGGTTTATCGGTGGATTTAATATTATCAATGTTATTCATTTTTAAAATTCATAGAATTGTACAACTCTGTTCATTTGATATTGTAATTTCAAATTTCAAAGTTGTTTATCCTGCAATGGATTGGAGTTTTGGTTCTTTTCCTTTTTCAAGTTTTTTTAAGCATTGCGTATGTTTTAGTTATACTGTTTGCTTTGGGGGAAGATGGATATTCTGATTTTCTGATCCTCACATTTGGATAGGTACTTTTTGAGAAAGTTGAAGAAAGTCAAGAAGAGCAATGGTCAAGTTCTTGCCATTAACGAGGTATTAGATCTGAAACACACTTCTATATTTTATTTGTTTATCCTGTGACCGTCACTAGGAAATTGAGCTAGTTTCAGCTTCTTGGAGTTCAGTTCAAATGCATTGGGTTTCTTTTGTTTATGAAGCCTTTCTGTTTTAGAGACGTTAAATCTGGTATATCATTCCTTAAGACGAAAAAAAACATGTCAGGTTTCTTCATTATCGAATGTCTACCAGTCTTGATGTATGCTTGCTATTTCTGTCATATGCTTGTGGCTTCTTAAGGAGCAAGTGATTGATTTCCTAGAAATTTTATGCTTATACGTATTTACGTATGTACATGCATAAATTTATACATAATAAATTTGTATAATTGAAGCAACTGCTGTTTCATTTTGAATGTTTACTCCTAAGTGAACTTTCAATGGTATTTTACTGTAATTGGCTTCTGAGTGATGATGAGTTTGGTGGTTAAAGATTCTAGTTGGCTGTTATTAGTTCTTATATAGGATTAGGATTGTACATGATTATTCATATAACGTTATGTAAGTTTCTGGTCTGCAAATAAGCCTTCCCTTTCCATCTTTTAGTTCCCTCCTCAAATGTCGTGTTGCGTCCATGTTCTAAGTTATAATACAACCAATAATCCTCTCGCCTTCGGTTCGCAAATTGTAGATTTTCGAGAAAAACCCAACCAAGGTCAAGAACTATGGTATTTGGCTGCGGTATCAGAGCCGAACTGGTTACCACAACATGTACAAGGAGTATCGGGATACGACATTGAACGGGGCTGTCGAGCAAATGTACATTGAGATGGCATCTCGCCATCGGGTGAGGTACCCGTGCATCCAAATCATCAAGACAGCAACTGTTCCTGCAAAACTGTGCAAGAGGGAGAGTACCAAGCAGTTCCATGACTCAAAGATCAAATTCCCGTTGGTGTTCAAGAAGGTGAGGCCACCCACCAGGAAGCTCAAGACAACTTACAAAGCATCTAGGCCCAACTTGTTCATGTAATTCTGCTCATCTTTGGCCTCTCTTCTATGGAAACATTTGATTATTGATTTTGGTAGATTATAGAAACTTCAACAAGTAGATGAGATTTCCGCGAAACAATTCATTTTTCTAGCATGATTATTCTGCTGCTAGAAGTAAAACTTTCACCTTTCAGAATCGAATAAAATAAAGCTGGTTTGTTTGTTTTCGCCTTTTCACATCTTTATATATTAATATCTTTTTCTTTAATTAATTTTAAAGCTTTTTCTTTTTTCCATTACGTATATATTTAGGCTAAATAAAGAGAAAAATTAATTTTTAACGGTTTATTAGTTTTATTTAATCTAATTACTATTTACCATGGAAATGTTGAAGTCAAGATCGATAAAATTATAATATGTAGAGAGGTATTAGTTTTATTTAATCTAATTATTATTTACCATGAAAATGTTGAAGTCAAGATCGATAAAATTATAATACGTAGAGAGGTGAGATGGTAAAAGATGATTAAAATTAATATTTCGATTGATATTTTTCACATTTTGTTTGATTTTTTTGTAATACAATAGAAAGCTCAATTTACCTCATTTACTGCCATGTTTACCACAACCCAACGATTTTAACTAACTTGAAAACTGAAAAGGAAATATAATAATTACTAATTACTATATAACATACATAAAATTTGGCGCGCGGATTCGGTTGAAGGCGAGGGATTTTCCCGATTCCTCAGTCCATTTCGTCTTTGAAATTTATTTGGGGAAATCGATTTTTATGTTTCCAATCCATTCTCGTTCAGTCAGGGATTTATTTTTCTTATTCGATTAAATTTCCTGGAAAATTTTACCCTCGCAATTTTGAATCGAACAAAGGGGAAAAGAAATCAAATCACTCGAACCAGAAATGAAGAACTGCAACACTATAATGACGGTTTCTCTTTCTCTCAGCGAAAAAGTGTACCGAATTACAGCACAGTGGGGACTGGAGAAGAAAACGAGCAAATAA

mRNA sequence

ATGGTCACGTTCAGATTTCACCAGTACCAGGTCGTGGGGAGGGCGCTTCCTTCTGAAGCGGATGAGCATCCCAAGATCTACCGGATGAAGCTCTGGGCTACCAACGAGGTCCGTGCCAAATCCAAGTTCTGGTACTTTTTGAGAAAGTTGAAGAAAGTCAAGAAGAGCAATGGTCAAGTTCTTGCCATTAACGAGATTTTCGAGAAAAACCCAACCAAGGTCAAGAACTATGGTATTTGGCTGCGGTATCAGAGCCGAACTGGTTACCACAACATGTACAAGGAGTATCGGGATACGACATTGAACGGGGCTGTCGAGCAAATGTACATTGAGATGGCATCTCGCCATCGGGTGAGGTACCCGTGCATCCAAATCATCAAGACAGCAACTGTTCCTGCAAAACTGTGCAAGAGGGAGAGTACCAAGCAGTTCCATGACTCAAAGATCAAATTCCCGTTGGTGTTCAAGAAGGTGAGGCCACCCACCAGGAAGCTCAAGACAACTTACAAAGCATCTAGGCCCAACTTGTTCATCGAAAAAGTGTACCGAATTACAGCACAGTGGGGACTGGAGAAGAAAACGAGCAAATAA

Coding sequence (CDS)

ATGGTCACGTTCAGATTTCACCAGTACCAGGTCGTGGGGAGGGCGCTTCCTTCTGAAGCGGATGAGCATCCCAAGATCTACCGGATGAAGCTCTGGGCTACCAACGAGGTCCGTGCCAAATCCAAGTTCTGGTACTTTTTGAGAAAGTTGAAGAAAGTCAAGAAGAGCAATGGTCAAGTTCTTGCCATTAACGAGATTTTCGAGAAAAACCCAACCAAGGTCAAGAACTATGGTATTTGGCTGCGGTATCAGAGCCGAACTGGTTACCACAACATGTACAAGGAGTATCGGGATACGACATTGAACGGGGCTGTCGAGCAAATGTACATTGAGATGGCATCTCGCCATCGGGTGAGGTACCCGTGCATCCAAATCATCAAGACAGCAACTGTTCCTGCAAAACTGTGCAAGAGGGAGAGTACCAAGCAGTTCCATGACTCAAAGATCAAATTCCCGTTGGTGTTCAAGAAGGTGAGGCCACCCACCAGGAAGCTCAAGACAACTTACAAAGCATCTAGGCCCAACTTGTTCATCGAAAAAGTGTACCGAATTACAGCACAGTGGGGACTGGAGAAGAAAACGAGCAAATAA

Protein sequence

MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRYPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFIEKVYRITAQWGLEKKTSK

Homology

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BLAST of Moc11g08720 vs. NCBI nr
Match: XP_022135435.1 (aspartyl protease family protein 2-like [Momordica charantia])

HSP 1 Score: 364.4 bits (934), Expect = 6.2e-97
Identity = 177/178 (99.44%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 595 MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 654

Query: 61  LAINEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRY 120
           LAINEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRY
Sbjct: 655 LAINEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRY 714

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFI 179
           PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF+
Sbjct: 715 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 772

[Close]

BLAST of Moc11g08720 vs. NCBI nr
Match: XP_038895722.1 (60S ribosomal protein L18a [Benincasa hispida])

HSP 1 Score: 358.2 bits (918), Expect = 4.5e-95
Identity = 173/178 (97.19%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MVTFRFHQYQVVGRALPSE+DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRY 120
           LAINEIFEKNPTK+KNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMY EMASRHRVR+
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRH 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFI 179
           PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF+
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 178

[Close]

BLAST of Moc11g08720 vs. NCBI nr
Match: XP_038898916.1 (60S ribosomal protein L18a [Benincasa hispida])

HSP 1 Score: 358.2 bits (918), Expect = 4.5e-95
Identity = 173/178 (97.19%), Postives = 176/178 (98.88%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60

Query: 61  LAINEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRY 120
           LAINEIFEKNPTK+KNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMY EMASRHRVR 
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFI 179
           PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF+
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 178

[Close]

BLAST of Moc11g08720 vs. NCBI nr
Match: KAG6583916.1 (60S ribosomal protein L18a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 357.1 bits (915), Expect = 9.9e-95
Identity = 172/178 (96.63%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MVTFRFHQYQVVGRALPSE+DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRY 120
           LAINEIFEKNPTK+KNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMY EMASRHRVR+
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRH 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFI 179
           PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTR+LKTTYKAS+PNLFI
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRRLKTTYKASKPNLFI 178

[Close]

BLAST of Moc11g08720 vs. NCBI nr
Match: XP_022936960.1 (60S ribosomal protein L18a isoform X1 [Cucurbita moschata] >XP_022976860.1 60S ribosomal protein L18a [Cucurbita maxima])

HSP 1 Score: 356.3 bits (913), Expect = 1.7e-94
Identity = 172/178 (96.63%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60

Query: 61  LAINEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRY 120
           LAINEIFEKNPTK+ NYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMY EMASRHRVR 
Sbjct: 61  LAINEIFEKNPTKINNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRS 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFI 179
           PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF+
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 178

[Close]

BLAST of Moc11g08720 vs. ExPASy Swiss-Prot
Match: Q9ATF5 (60S ribosomal protein L18a OS=Castanea sativa OX=21020 GN=RPL18A PE=2 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 3.9e-94
Identity = 164/178 (92.13%), Postives = 174/178 (97.75%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MVTFRFHQYQVVGR LPSE DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MVTFRFHQYQVVGRGLPSETDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60

Query: 61  LAINEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRY 120
           LAINEIFEKNPTK+KNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVR+
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFI 179
           PCIQIIKTAT+PAKLCKRES+KQFH+SKIKFPLV +K+RPP+RKLKT YKASRPNLF+
Sbjct: 121 PCIQIIKTATIPAKLCKRESSKQFHNSKIKFPLVTRKIRPPSRKLKTHYKASRPNLFM 178

[Close]

BLAST of Moc11g08720 vs. ExPASy Swiss-Prot
Match: P51418 (60S ribosomal protein L18a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18AB PE=1 SV=2)

HSP 1 Score: 334.0 bits (855), Expect = 1.2e-90
Identity = 159/178 (89.33%), Postives = 171/178 (96.07%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           M  FRFHQYQVVGRALP+E D  PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60

Query: 61  LAINEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRY 120
           LAINEI+EKNPT +KN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMY EMASRHRVR+
Sbjct: 61  LAINEIYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFI 179
           PCIQIIKTATVPAKLCKRESTKQFH+SKIKFPLVF+KVRPP+RKLKTTYKA++PNLF+
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLFM 178

[Close]

BLAST of Moc11g08720 vs. ExPASy Swiss-Prot
Match: Q9LUD4 (60S ribosomal protein L18a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18AC PE=2 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 1.3e-89
Identity = 157/175 (89.71%), Postives = 167/175 (95.43%), Query Frame = 0


Query: 4   FRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAI 63
           FRFHQYQVVGRALP+E DEHPKIYRMKLW  NEV AKSKFWYF+RKLKKVKKSNGQ+LAI
Sbjct: 4   FRFHQYQVVGRALPTENDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQMLAI 63

Query: 64  NEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRYPCI 123
           NEIFEKNPT +KNYGIWLRYQSRTGYHNMYKEYRDTTLNG VEQMY EMASRHRVR+PCI
Sbjct: 64  NEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFPCI 123

Query: 124 QIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFI 179
           QIIKTATVPAKLCKRE TKQFH+SKIKFPLVF+KVRPP+RKLKTTYKAS+PNLF+
Sbjct: 124 QIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM 178

[Close]

BLAST of Moc11g08720 vs. ExPASy Swiss-Prot
Match: Q943F3 (60S ribosomal protein L18a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL18A PE=1 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 2.2e-89
Identity = 157/178 (88.20%), Postives = 167/178 (93.82%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           M  FRFHQYQVVGR LP+  DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MGAFRFHQYQVVGRGLPTPTDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60

Query: 61  LAINEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRY 120
           LAINEIFEKNPT +KNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMY EMASRHRVR+
Sbjct: 61  LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFI 179
           PCIQIIKTATV  KLCKR++TKQFH S IKFPLV++KVRPPTRKLKTT+KASRPNLF+
Sbjct: 121 PCIQIIKTATVHFKLCKRDNTKQFHKSDIKFPLVYRKVRPPTRKLKTTFKASRPNLFM 178

[Close]

BLAST of Moc11g08720 vs. ExPASy Swiss-Prot
Match: Q8L7K0 (60S ribosomal protein L18a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18AA PE=2 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 9.3e-88
Identity = 154/178 (86.52%), Postives = 167/178 (93.82%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           M   R HQYQVVGRALP+E DE PKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQ+
Sbjct: 1   MSVIRLHQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQM 60

Query: 61  LAINEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRY 120
           LAINEIFEKNPT +KN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMY EMASRHRVR+
Sbjct: 61  LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFI 179
           PCIQIIKTATVPA LCKRESTKQFH+SKIKFPLVF+KVRPPTRKLKTT+KA++PNLF+
Sbjct: 121 PCIQIIKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM 178

[Close]

BLAST of Moc11g08720 vs. ExPASy TrEMBL
Match: A0A6J1C128 (aspartyl protease family protein 2-like OS=Momordica charantia OX=3673 GN=LOC111007387 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.0e-97
Identity = 177/178 (99.44%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 595 MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 654

Query: 61  LAINEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRY 120
           LAINEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRY
Sbjct: 655 LAINEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRY 714

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFI 179
           PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF+
Sbjct: 715 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 772

[Close]

BLAST of Moc11g08720 vs. ExPASy TrEMBL
Match: A0A6J1IKM6 (60S ribosomal protein L18a OS=Cucurbita maxima OX=3661 GN=LOC111477104 PE=3 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 8.2e-95
Identity = 172/178 (96.63%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60

Query: 61  LAINEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRY 120
           LAINEIFEKNPTK+ NYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMY EMASRHRVR 
Sbjct: 61  LAINEIFEKNPTKINNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRS 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFI 179
           PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF+
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 178

[Close]

BLAST of Moc11g08720 vs. ExPASy TrEMBL
Match: A0A6J1FF70 (60S ribosomal protein L18a OS=Cucurbita moschata OX=3662 GN=LOC111443392 PE=3 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 8.2e-95
Identity = 172/178 (96.63%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60

Query: 61  LAINEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRY 120
           LAINEIFEKNPTK+ NYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMY EMASRHRVR 
Sbjct: 61  LAINEIFEKNPTKINNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRS 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFI 179
           PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF+
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 178

[Close]

BLAST of Moc11g08720 vs. ExPASy TrEMBL
Match: A0A6J1KGM6 (60S ribosomal protein L18a OS=Cucurbita maxima OX=3661 GN=LOC111495598 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.1e-94
Identity = 171/178 (96.07%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MVTFRFHQYQVVGRALPSE+DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRY 120
           LAINEIFEKNPTK+KNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMY EMASRHRVR+
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRH 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFI 179
           PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTR+LKTTYKAS+PNLF+
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRRLKTTYKASKPNLFM 178

[Close]

BLAST of Moc11g08720 vs. ExPASy TrEMBL
Match: A0A6J1ELJ5 (60S ribosomal protein L18a OS=Cucurbita moschata OX=3662 GN=LOC111434402 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.1e-94
Identity = 171/178 (96.07%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MVTFRFHQYQVVGRALPSE+DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRY 120
           LAINEIFEKNPTK+KNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMY EMASRHRVR+
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRH 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFI 179
           PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTR+LKTTYKAS+PNLF+
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRRLKTTYKASKPNLFM 178

[Close]

BLAST of Moc11g08720 vs. TAIR 10
Match: AT2G34480.1 (Ribosomal protein L18ae/LX family protein )

HSP 1 Score: 334.0 bits (855), Expect = 8.4e-92
Identity = 159/178 (89.33%), Postives = 171/178 (96.07%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           M  FRFHQYQVVGRALP+E D  PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60

Query: 61  LAINEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRY 120
           LAINEI+EKNPT +KN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMY EMASRHRVR+
Sbjct: 61  LAINEIYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFI 179
           PCIQIIKTATVPAKLCKRESTKQFH+SKIKFPLVF+KVRPP+RKLKTTYKA++PNLF+
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLFM 178

[Close]

BLAST of Moc11g08720 vs. TAIR 10
Match: AT3G14600.1 (Ribosomal protein L18ae/LX family protein )

HSP 1 Score: 330.5 bits (846), Expect = 9.3e-91
Identity = 157/175 (89.71%), Postives = 167/175 (95.43%), Query Frame = 0


Query: 4   FRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAI 63
           FRFHQYQVVGRALP+E DEHPKIYRMKLW  NEV AKSKFWYF+RKLKKVKKSNGQ+LAI
Sbjct: 4   FRFHQYQVVGRALPTENDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQMLAI 63

Query: 64  NEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRYPCI 123
           NEIFEKNPT +KNYGIWLRYQSRTGYHNMYKEYRDTTLNG VEQMY EMASRHRVR+PCI
Sbjct: 64  NEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFPCI 123

Query: 124 QIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFI 179
           QIIKTATVPAKLCKRE TKQFH+SKIKFPLVF+KVRPP+RKLKTTYKAS+PNLF+
Sbjct: 124 QIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM 178

[Close]

BLAST of Moc11g08720 vs. TAIR 10
Match: AT1G29965.1 (Ribosomal protein L18ae/LX family protein )

HSP 1 Score: 324.3 bits (830), Expect = 6.6e-89
Identity = 154/178 (86.52%), Postives = 167/178 (93.82%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           M   R HQYQVVGRALP+E DE PKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQ+
Sbjct: 1   MSVIRLHQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQM 60

Query: 61  LAINEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRY 120
           LAINEIFEKNPT +KN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMY EMASRHRVR+
Sbjct: 61  LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFI 179
           PCIQIIKTATVPA LCKRESTKQFH+SKIKFPLVF+KVRPPTRKLKTT+KA++PNLF+
Sbjct: 121 PCIQIIKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM 178

[Close]

BLAST of Moc11g08720 vs. TAIR 10
Match: AT1G29970.2 (60S ribosomal protein L18A-1 )

HSP 1 Score: 320.9 bits (821), Expect = 7.3e-88
Identity = 152/172 (88.37%), Postives = 165/172 (95.93%), Query Frame = 0


Query: 7   HQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEI 66
           HQYQVVGRALP+E DE PKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQ+LAINEI
Sbjct: 141 HQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQMLAINEI 200

Query: 67  FEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRYPCIQII 126
           FEKNPT +KN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMY EMASRHRVR+PCIQII
Sbjct: 201 FEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQII 260

Query: 127 KTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFI 179
           KTATVPA LCKRESTKQFH+SKIKFPLVF+KVRPPTRKLKTT+KA++PNLF+
Sbjct: 261 KTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM 312

The following BLAST results are available for this feature:

BLAST of Moc11g08720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135435.1	6.2e-97	99.44	aspartyl protease family protein 2-like [Momordica charantia]	[more]
XP_038895722.1	4.5e-95	97.19	60S ribosomal protein L18a [Benincasa hispida]	[more]
XP_038898916.1	4.5e-95	97.19	60S ribosomal protein L18a [Benincasa hispida]	[more]
KAG6583916.1	9.9e-95	96.63	60S ribosomal protein L18a, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022936960.1	1.7e-94	96.63	60S ribosomal protein L18a isoform X1 [Cucurbita moschata] >XP_022976860.1 60S r...	[more]

BLAST of Moc11g08720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ATF5	3.9e-94	92.13	60S ribosomal protein L18a OS=Castanea sativa OX=21020 GN=RPL18A PE=2 SV=1	[more]
P51418	1.2e-90	89.33	60S ribosomal protein L18a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18AB PE=1 SV=...	[more]
Q9LUD4	1.3e-89	89.71	60S ribosomal protein L18a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18AC PE=2 SV=...	[more]
Q943F3	2.2e-89	88.20	60S ribosomal protein L18a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL18A PE...	[more]
Q8L7K0	9.3e-88	86.52	60S ribosomal protein L18a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18AA PE=2 SV=...	[more]

BLAST of Moc11g08720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C128	3.0e-97	99.44	aspartyl protease family protein 2-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1IKM6	8.2e-95	96.63	60S ribosomal protein L18a OS=Cucurbita maxima OX=3661 GN=LOC111477104 PE=3 SV=1	[more]
A0A6J1FF70	8.2e-95	96.63	60S ribosomal protein L18a OS=Cucurbita moschata OX=3662 GN=LOC111443392 PE=3 SV...	[more]
A0A6J1KGM6	1.1e-94	96.07	60S ribosomal protein L18a OS=Cucurbita maxima OX=3661 GN=LOC111495598 PE=3 SV=1	[more]
A0A6J1ELJ5	1.1e-94	96.07	60S ribosomal protein L18a OS=Cucurbita moschata OX=3662 GN=LOC111434402 PE=3 SV...	[more]

BLAST of Moc11g08720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34480.1	8.4e-92	89.33	Ribosomal protein L18ae/LX family protein	[more]
AT3G14600.1	9.3e-91	89.71	Ribosomal protein L18ae/LX family protein	[more]
AT1G29965.1	6.6e-89	86.52	Ribosomal protein L18ae/LX family protein	[more]
AT1G29970.2	7.3e-88	88.37	60S ribosomal protein L18A-1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.10		coord: 1..71 e-value: 4.1E-38 score: 131.0
None	No IPR available	GENE3D	3.10.20.10		coord: 72..147 e-value: 2.1E-42 score: 145.3
None	No IPR available	PANTHER	PTHR10052:SF45	60S RIBOSOMAL PROTEIN L18A	coord: 1..137
None	No IPR available	PANTHER	PTHR10052:SF45	60S RIBOSOMAL PROTEIN L18A	coord: 138..183
None	No IPR available	SUPERFAMILY	160374	RplX-like	coord: 71..146
IPR023573	Ribosomal protein 50S-L18Ae/60S-L20/60S-L18A	PFAM	PF01775	Ribosomal_L18A	coord: 7..128 e-value: 7.0E-55 score: 184.3
IPR021138	60S ribosomal protein L18a/ L20, eukaryotes	PIRSF	PIRSF002190	Ribosomal_L18a	coord: 1..178 e-value: 2.0E-72 score: 240.2
IPR028877	50S ribosomal protein L18Ae/60S ribosomal protein L20 and L18a	PANTHER	PTHR10052	60S RIBOSOMAL PROTEIN L18A	coord: 1..137
IPR028877	50S ribosomal protein L18Ae/60S ribosomal protein L20 and L18a	PANTHER	PTHR10052	60S RIBOSOMAL PROTEIN L18A	coord: 138..183
IPR028877	50S ribosomal protein L18Ae/60S ribosomal protein L20 and L18a	HAMAP	MF_00273	Ribosomal_L18Ae	coord: 6..69 score: 24.336386

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g08720.1	Moc11g08720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003735	structural constituent of ribosome