Moc11g08560 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g08560
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Biogenesis of lysosome-related organelles complex 1 subunit 7
Location	chr11: 6089503 .. 6092335 (+)
RNA-Seq Expression	Moc11g08560
Synteny	Moc11g08560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACAGTCCGGAGGGAGAACTCAATCAATCTGCCAATCAAGACAGCAACGTCTCTGTTGAATTGGAGCATTCAGTTAGTCAAAATGGTCTTCTCCGGGAAGGAAATGGTATTGCGAATATGAATTTGGGAAACGCTGATACTGTGGCAAAAGGGCTCTCTTCTATGCTTAGCAATATCATAAGGGATTTTGACTCCAAAGCTGACGATACTCTTAAAAGCCAGAGCCAGCTTTCATCTTCCCTCGATCGTCTTACTTCAGGCAGGATTATATTTACTTGGTTTGTCTTATTAGCTTTATCATATAAAATAGAATTTTGTACTTCAACTAGTTATAAATTTACAAATATAGCTTTGAAGATTTTGTCACTTGCTAGGTTTAGGGGAAGTTTATGCATCATACATGATATTCTATCATAATTACCTTTTTTCTTGTATTGGATGAAAAAAATGCAGCTTCTGAGTCTCATGGTTTTTTCAACAGTGTGAAAAGTTATTGTTTTAACTTTAACAGAGCTGGATCAATTACTTGAAGATGCACCTTTTCCATTCATCATGCAGCATGCCTCAAGGATTTCTAATGTAAGAAAGAGAGTTTTGTCACTAAATTCCATCTTAAGATCCATACAACGAAGAGTGGATAACATAGATCGGGCTATCGCGATGGGCAATCTACAAGGTGATTAACTTCTTTCCTCTAGGGGCCTCAATTTTATTTTCTTTCATGGCTTGTGAATTGAGGGCATCTTATTGGATAGTATCATTGGTTGTTAAGGTTTGTTCAACAATGTTCTTATTTCTGAAAAAACACGTGTTTATTTGATAACTACTATCTGTTTCTCATTCTTCATCTTAATGAAAGAAAGGTGTTATCATAATTGTTTTCTATTTCATGTTCTTTATCATAAAAATGAAGTTCTCGAGTTGTTGTTCTTCCTGGCATTCCTATAAAATTCTTTTGTTATTAACTCTAATTTGGATTTTTCTGTAAGCTCATAATCATGAATCTCATATTTTGTATGTGACTATTCATTACATCAATGAACTAGATGGGATCCTTTACTCTTCAGATAGTGAGATGGATCAAGATATTCATTGCAACACCTCAGTTGTTCCTTCTTAGGGTTTCTCATTCAGATTTCATGTGAAACTTTTTATACACATGAATGCTGAATGTGCATAGTTAATATCTCTCTCCTATGATTTTGTAAAAAGGCATGCTTCTGCATTGAATTTCATTCATATCCCTGCTTCATGGTTTAGGAGGTCATCATTTTTTAAGGCATTTCTCTAAGGGACAACGAGGCCAATGTTTTGCTGTTTGAAAATGTTTAGATGTTTATACACCCTAATACTTCATATGCTTAGACACGATCTGCCATTATGTGTCCCTTTTCTGGAAAAACAACTATAAAAAAATAGGGGACAGAACTCCCTCCTTGTGCTTGGACATGATGGGACAAAATAATAGAGATCAATAAAATAGACTTTAATTTAGTTGAAGGTCACGACCATTAGTGATGATAGAGGTCAAGAAACTAATGAACATGGACTGAGTGAACAATGAAAAAGAAAACTTAAATTTTGCGGAAGGGAAAATTGAAGATGTTTTGTGCGTAATGATTATCTCTACCCTTTCAAATTTTTGAGCTGTCATGTTATGAATTTGGACACATGATTAAATTTCAATTGTTGGCCTTTTCTAAAGCAAGTAATACAGATTCATTAAAAGATGAAATTTTAGGCCCTGATTGATAACAATTTCGTTTTTTGGTTTTCTGTTTTTAGGTCCTGTTTGATAACCATTTCGTTTTTAGTTTTATGTGTTAAAAAACTATGTTAGTTTTTGTTCGATGTCATTAGTAAGTTTTTCAATTGTCTTGAAAACATATGTGAATTCTTAGCTAAATTTCAATTACAAAAACAAGTTTTTGATTTTTTTTCTCTTTCAAAAGTTGGCATAGATTTTGAAAATGTTTATAAAAACTATATAATAAAACAAAGGAACACAAAGGTGAAAGTAATCTTTTTAAGCTTAATTTTAAAATACAGAAGCGAAAAACGAAATGGTTGGGCCTTATAAAATCCAATTTAGGAAGGTAAAGGCTATGAATCTGTTCTATTGTGTTCAAATAGTAGTCTTGCAAGGGATGATTTATTATAACCATAAATCATGACTTTTTTTTTTTTTTTTGCTTTCTGAACGTATGAGCTTGCTTTTTTTAATGCAGGCATGGGACAATTCATTTGCGTCTGTACAGAGTAGTTTCAATCTTGGCAACTTGAAATCTTTCTTCTTTGTGCCTTTTCTGATGTTAATGACATATACCCCCATGAGATGCTGTAATAAATCTCATATGTTAAAGTAGTTTTTTAATTTAATTTCCTTTAGTTCTAGGCATTTGGATATCGATGATAGGATTTTGGAATTTCACATATATTCTTGTAGAGTTTTTTTTTGTTTATTATTTCTTATGTTTGCGGAGGGCCTCAGTATTTGGTTTCAGAATTTGGTTGCAGATATCGGTAATTATTCTCAGAATGAATTCCTTTTGAAAAACTTTCTTTTTCTGGTCGACGTATCATCTTTTTAACCAAAATAACTCAAAGTAAATAAGAATATCTCCCTGCTATCATTTCCTCGTCTCACTGTCACTAAATCATACCTTTTTTATTTTATTTTTTTCTTTTTGGACGTGAATCTCTGACCTTTTGGTCAAAGATATATGTCTTTCTTAACCTTGAGTTATACTCAGGTTGGTCACTAAACTATAACTTTTTATCTACAGATACTTGTTCCTCTCAAAGTTCCTTGCAGCCTCAGCATGGTTGA

mRNA sequence

ATGCACAGTCCGGAGGGAGAACTCAATCAATCTGCCAATCAAGACAGCAACGTCTCTGTTGAATTGGAGCATTCAGTTAGTCAAAATGGTCTTCTCCGGGAAGGAAATGGTATTGCGAATATGAATTTGGGAAACGCTGATACTGTGGCAAAAGGGCTCTCTTCTATGCTTAGCAATATCATAAGGGATTTTGACTCCAAAGCTGACGATACTCTTAAAAGCCAGAGCCAGCTTTCATCTTCCCTCGATCGTCTTACTTCAGAGCTGGATCAATTACTTGAAGATGCACCTTTTCCATTCATCATGCAGCATGCCTCAAGGATTTCTAATGTAAGAAAGAGAGTTTTGTCACTAAATTCCATCTTAAGATCCATACAACGAAGAGTGGATAACATAGATCGGGCTATCGCGATGGGCAATCTACAAGATACTTGTTCCTCTCAAAGTTCCTTGCAGCCTCAGCATGGTTGA

Coding sequence (CDS)

ATGCACAGTCCGGAGGGAGAACTCAATCAATCTGCCAATCAAGACAGCAACGTCTCTGTTGAATTGGAGCATTCAGTTAGTCAAAATGGTCTTCTCCGGGAAGGAAATGGTATTGCGAATATGAATTTGGGAAACGCTGATACTGTGGCAAAAGGGCTCTCTTCTATGCTTAGCAATATCATAAGGGATTTTGACTCCAAAGCTGACGATACTCTTAAAAGCCAGAGCCAGCTTTCATCTTCCCTCGATCGTCTTACTTCAGAGCTGGATCAATTACTTGAAGATGCACCTTTTCCATTCATCATGCAGCATGCCTCAAGGATTTCTAATGTAAGAAAGAGAGTTTTGTCACTAAATTCCATCTTAAGATCCATACAACGAAGAGTGGATAACATAGATCGGGCTATCGCGATGGGCAATCTACAAGATACTTGTTCCTCTCAAAGTTCCTTGCAGCCTCAGCATGGTTGA

Protein sequence

MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGNLQDTCSSQSSLQPQHG

Homology

[Close]

BLAST of Moc11g08560 vs. NCBI nr
Match: XP_022143160.1 (uncharacterized protein LOC111013092 [Momordica charantia] >XP_022143168.1 uncharacterized protein LOC111013092 [Momordica charantia] >XP_022143175.1 uncharacterized protein LOC111013092 [Momordica charantia] >XP_022143183.1 uncharacterized protein LOC111013092 [Momordica charantia])

HSP 1 Score: 292.0 bits (746), Expect = 3.1e-75
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNI 60
           MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNI
Sbjct: 1   MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNI 60

Query: 61  IRDFDSKADDTLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISNVRKRVLSLNS 120
           IRDFDSKADDTLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISNVRKRVLSLNS
Sbjct: 61  IRDFDSKADDTLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISNVRKRVLSLNS 120

Query: 121 ILRSIQRRVDNIDRAIAMGNLQDTCSSQSSLQPQHG 157
           ILRSIQRRVDNIDRAIAMGNLQDTCSSQSSLQPQHG
Sbjct: 121 ILRSIQRRVDNIDRAIAMGNLQDTCSSQSSLQPQHG 156

[Close]

BLAST of Moc11g08560 vs. NCBI nr
Match: XP_023535159.1 (uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo] >XP_023535160.1 uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo] >XP_023535161.1 uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo] >XP_023535162.1 uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 225.3 bits (573), Expect = 3.6e-55
Identity = 124/156 (79.49%), Postives = 137/156 (87.82%), Query Frame = 0


Query: 1   MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNI 60
           MHSPE  L+  AN+DSNVSVELE S+S+NG L+E N +AN NL N++ +A GLSSML NI
Sbjct: 1   MHSPEKVLDDPANEDSNVSVELETSISRNGGLQEENDLANTNLENSNALANGLSSMLINI 60

Query: 61  IRDFDSKADDTLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISNVRKRVLSLNS 120
           IRDFDSKADDTLKSQSQLSSSLDR+T ELDQLLEDAPFPFIMQHASRIS+VRKRVLSLNS
Sbjct: 61  IRDFDSKADDTLKSQSQLSSSLDRITIELDQLLEDAPFPFIMQHASRISSVRKRVLSLNS 120

Query: 121 ILRSIQRRVDNIDRAIAMGNLQDTCSSQSSLQPQHG 157
           ILRSIQRR+DNIDRAI+MGN  DT SSQSS Q QHG
Sbjct: 121 ILRSIQRRLDNIDRAISMGNRPDTLSSQSSSQTQHG 156

[Close]

BLAST of Moc11g08560 vs. NCBI nr
Match: XP_022976873.1 (uncharacterized protein LOC111477110 [Cucurbita maxima] >XP_022976874.1 uncharacterized protein LOC111477110 [Cucurbita maxima] >XP_022976875.1 uncharacterized protein LOC111477110 [Cucurbita maxima] >XP_022976876.1 uncharacterized protein LOC111477110 [Cucurbita maxima] >XP_022976877.1 uncharacterized protein LOC111477110 [Cucurbita maxima])

HSP 1 Score: 221.5 bits (563), Expect = 5.2e-54
Identity = 121/156 (77.56%), Postives = 136/156 (87.18%), Query Frame = 0


Query: 1   MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNI 60
           MHSPE  L+  AN+DS+ SVELE S+S+NG L+E N +AN NL N++ +A GLSSML NI
Sbjct: 1   MHSPEKVLDDPANEDSSFSVELETSISRNGNLKEENDLANTNLENSNALANGLSSMLINI 60

Query: 61  IRDFDSKADDTLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISNVRKRVLSLNS 120
           IRDFDSKADDTLKSQSQLSSSLDR+T+ELDQLLEDAPFPFIMQHASRIS+VRKRVLSLNS
Sbjct: 61  IRDFDSKADDTLKSQSQLSSSLDRITTELDQLLEDAPFPFIMQHASRISSVRKRVLSLNS 120

Query: 121 ILRSIQRRVDNIDRAIAMGNLQDTCSSQSSLQPQHG 157
           ILRSIQRR+DNIDRAI+MGN  DT SSQS  Q QHG
Sbjct: 121 ILRSIQRRLDNIDRAISMGNRPDTLSSQSCSQTQHG 156

[Close]

BLAST of Moc11g08560 vs. NCBI nr
Match: XP_022936774.1 (uncharacterized protein LOC111443260 isoform X2 [Cucurbita moschata] >XP_022936775.1 uncharacterized protein LOC111443260 isoform X2 [Cucurbita moschata])

HSP 1 Score: 219.2 bits (557), Expect = 2.6e-53
Identity = 121/156 (77.56%), Postives = 136/156 (87.18%), Query Frame = 0


Query: 1   MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNI 60
           MHSPE  L+  AN+DS+VSVELE S+S+NG L+E N +AN NL N++ +A GLSSML NI
Sbjct: 1   MHSPEKVLDDPANEDSSVSVELETSISRNGDLKEENDLANTNLENSNALANGLSSMLINI 60

Query: 61  IRDFDSKADDTLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISNVRKRVLSLNS 120
           IRDFDSKADDTLKSQSQLSSSLDR+T+ELDQLLE APFPFIMQHASRIS+VRKRVLSLNS
Sbjct: 61  IRDFDSKADDTLKSQSQLSSSLDRITTELDQLLEAAPFPFIMQHASRISSVRKRVLSLNS 120

Query: 121 ILRSIQRRVDNIDRAIAMGNLQDTCSSQSSLQPQHG 157
           IL SIQRR+DNIDRAI+MGN  DT SSQSS Q QHG
Sbjct: 121 ILGSIQRRLDNIDRAISMGNRPDTLSSQSSSQTQHG 156

[Close]

BLAST of Moc11g08560 vs. NCBI nr
Match: XP_004144641.1 (uncharacterized protein LOC101218072 [Cucumis sativus] >XP_031740504.1 uncharacterized protein LOC101218072 [Cucumis sativus] >KAE8649780.1 hypothetical protein Csa_012268 [Cucumis sativus])

HSP 1 Score: 214.5 bits (545), Expect = 6.3e-52
Identity = 120/154 (77.92%), Postives = 133/154 (86.36%), Query Frame = 0


Query: 1   MHSPEG-ELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSN 60
           MHSPE  + + SAN+DSNVS ELE S++ NG L+EGN   N NLGN++ +A GLSSML N
Sbjct: 1   MHSPEKLDDDYSANEDSNVSAELETSITLNGDLQEGNDSENKNLGNSNALANGLSSMLIN 60

Query: 61  IIRDFDSKADDTLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 120
           IIRDFDSKADDTLKSQ+ LSSSLDRLT+ELDQLLEDAPFPFIMQHASRISNVRKRVLSLN
Sbjct: 61  IIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLN 120

Query: 121 SILRSIQRRVDNIDRAIAMGNLQDTCSSQSSLQP 154
           SILR+IQRR+DNIDRAI MGNL DT SS SS QP
Sbjct: 121 SILRTIQRRMDNIDRAITMGNLPDTRSSHSSSQP 154

[Close]

BLAST of Moc11g08560 vs. ExPASy TrEMBL
Match: A0A6J1CN29 (Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Momordica charantia OX=3673 GN=LOC111013092 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.5e-75
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNI 60
           MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNI
Sbjct: 1   MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNI 60

Query: 61  IRDFDSKADDTLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISNVRKRVLSLNS 120
           IRDFDSKADDTLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISNVRKRVLSLNS
Sbjct: 61  IRDFDSKADDTLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISNVRKRVLSLNS 120

Query: 121 ILRSIQRRVDNIDRAIAMGNLQDTCSSQSSLQPQHG 157
           ILRSIQRRVDNIDRAIAMGNLQDTCSSQSSLQPQHG
Sbjct: 121 ILRSIQRRVDNIDRAIAMGNLQDTCSSQSSLQPQHG 156

[Close]

BLAST of Moc11g08560 vs. ExPASy TrEMBL
Match: A0A6J1IKP2 (Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita maxima OX=3661 GN=LOC111477110 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.5e-54
Identity = 121/156 (77.56%), Postives = 136/156 (87.18%), Query Frame = 0


Query: 1   MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNI 60
           MHSPE  L+  AN+DS+ SVELE S+S+NG L+E N +AN NL N++ +A GLSSML NI
Sbjct: 1   MHSPEKVLDDPANEDSSFSVELETSISRNGNLKEENDLANTNLENSNALANGLSSMLINI 60

Query: 61  IRDFDSKADDTLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISNVRKRVLSLNS 120
           IRDFDSKADDTLKSQSQLSSSLDR+T+ELDQLLEDAPFPFIMQHASRIS+VRKRVLSLNS
Sbjct: 61  IRDFDSKADDTLKSQSQLSSSLDRITTELDQLLEDAPFPFIMQHASRISSVRKRVLSLNS 120

Query: 121 ILRSIQRRVDNIDRAIAMGNLQDTCSSQSSLQPQHG 157
           ILRSIQRR+DNIDRAI+MGN  DT SSQS  Q QHG
Sbjct: 121 ILRSIQRRLDNIDRAISMGNRPDTLSSQSCSQTQHG 156

[Close]

BLAST of Moc11g08560 vs. ExPASy TrEMBL
Match: A0A6J1FEP4 (Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita moschata OX=3662 GN=LOC111443260 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.2e-53
Identity = 121/156 (77.56%), Postives = 136/156 (87.18%), Query Frame = 0


Query: 1   MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNI 60
           MHSPE  L+  AN+DS+VSVELE S+S+NG L+E N +AN NL N++ +A GLSSML NI
Sbjct: 1   MHSPEKVLDDPANEDSSVSVELETSISRNGDLKEENDLANTNLENSNALANGLSSMLINI 60

Query: 61  IRDFDSKADDTLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISNVRKRVLSLNS 120
           IRDFDSKADDTLKSQSQLSSSLDR+T+ELDQLLE APFPFIMQHASRIS+VRKRVLSLNS
Sbjct: 61  IRDFDSKADDTLKSQSQLSSSLDRITTELDQLLEAAPFPFIMQHASRISSVRKRVLSLNS 120

Query: 121 ILRSIQRRVDNIDRAIAMGNLQDTCSSQSSLQPQHG 157
           IL SIQRR+DNIDRAI+MGN  DT SSQSS Q QHG
Sbjct: 121 ILGSIQRRLDNIDRAISMGNRPDTLSSQSSSQTQHG 156

[Close]

BLAST of Moc11g08560 vs. ExPASy TrEMBL
Match: A0A6J1F9C2 (Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita moschata OX=3662 GN=LOC111443260 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.5e-51
Identity = 121/163 (74.23%), Postives = 136/163 (83.44%), Query Frame = 0


Query: 1   MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNI 60
           MHSPE  L+  AN+DS+VSVELE S+S+NG L+E N +AN NL N++ +A GLSSML NI
Sbjct: 1   MHSPEKVLDDPANEDSSVSVELETSISRNGDLKEENDLANTNLENSNALANGLSSMLINI 60

Query: 61  IRDFDSKADDTLKSQSQLSSSLDRLT-------SELDQLLEDAPFPFIMQHASRISNVRK 120
           IRDFDSKADDTLKSQSQLSSSLDR+T       +ELDQLLE APFPFIMQHASRIS+VRK
Sbjct: 61  IRDFDSKADDTLKSQSQLSSSLDRITTVITSTFTELDQLLEAAPFPFIMQHASRISSVRK 120

Query: 121 RVLSLNSILRSIQRRVDNIDRAIAMGNLQDTCSSQSSLQPQHG 157
           RVLSLNSIL SIQRR+DNIDRAI+MGN  DT SSQSS Q QHG
Sbjct: 121 RVLSLNSILGSIQRRLDNIDRAISMGNRPDTLSSQSSSQTQHG 163

[Close]

BLAST of Moc11g08560 vs. ExPASy TrEMBL
Match: A0A6J1FIR1 (Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita moschata OX=3662 GN=LOC111445840 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 3.4e-51
Identity = 118/156 (75.64%), Postives = 131/156 (83.97%), Query Frame = 0


Query: 1   MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNI 60
           MHS E   + SAN+DS VS ELE S+S NG + E N IANMNLG+++ +A GLSSML NI
Sbjct: 1   MHSLEKVHDDSANKDSKVSAELEPSISPNGDIEEENDIANMNLGDSNALANGLSSMLMNI 60

Query: 61  IRDFDSKADDTLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISNVRKRVLSLNS 120
           +RDFDSKADDTLKSQSQLS SLDRLTSELDQLLEDAPFPFIMQHA RIS+VRKRVLSLNS
Sbjct: 61  MRDFDSKADDTLKSQSQLSFSLDRLTSELDQLLEDAPFPFIMQHALRISSVRKRVLSLNS 120

Query: 121 ILRSIQRRVDNIDRAIAMGNLQDTCSSQSSLQPQHG 157
           ILRS+QRRVDNIDR I+M NL D  SSQSS QP +G
Sbjct: 121 ILRSVQRRVDNIDRVISMSNLPDIRSSQSSSQPHNG 156

[Close]

BLAST of Moc11g08560 vs. TAIR 10
Match: AT1G79070.1 (SNARE-associated protein-related )

HSP 1 Score: 126.7 bits (317), Expect = 1.6e-29
Identity = 63/107 (58.88%), Postives = 86/107 (80.37%), Query Frame = 0


Query: 44  GNADTVAKGLSSMLSNIIRDFDSKADDTLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQ 103
           G  + +A+GLS+ML ++I+DFDSKA DTL SQ +LS SLDRL  ELDQLLE+AP PFI+Q
Sbjct: 32  GGGEAMARGLSAMLESVIKDFDSKALDTLNSQDELSGSLDRLVQELDQLLENAPLPFIVQ 91

Query: 104 HASRISNVRKRVLSLNSILRSIQRRVDNIDRAIAMGNLQDTCSSQSS 151
           HASRIS+V++RV SLN +L+S+QRR+DNID  ++    Q+  SS+++
Sbjct: 92  HASRISSVKQRVSSLNLVLKSVQRRIDNIDHMLSANTTQEKASSETT 138

The following BLAST results are available for this feature:

BLAST of Moc11g08560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143160.1	3.1e-75	100.00	uncharacterized protein LOC111013092 [Momordica charantia] >XP_022143168.1 uncha...	[more]
XP_023535159.1	3.6e-55	79.49	uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo] >XP_023535160....	[more]
XP_022976873.1	5.2e-54	77.56	uncharacterized protein LOC111477110 [Cucurbita maxima] >XP_022976874.1 uncharac...	[more]
XP_022936774.1	2.6e-53	77.56	uncharacterized protein LOC111443260 isoform X2 [Cucurbita moschata] >XP_0229367...	[more]
XP_004144641.1	6.3e-52	77.92	uncharacterized protein LOC101218072 [Cucumis sativus] >XP_031740504.1 uncharact...	[more]

BLAST of Moc11g08560 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g08560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CN29	1.5e-75	100.00	Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Momordica chara...	[more]
A0A6J1IKP2	2.5e-54	77.56	Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita maxim...	[more]
A0A6J1FEP4	1.2e-53	77.56	Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita mosch...	[more]
A0A6J1F9C2	1.5e-51	74.23	Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita mosch...	[more]
A0A6J1FIR1	3.4e-51	75.64	Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita mosch...	[more]

BLAST of Moc11g08560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79070.1	1.6e-29	58.88	SNARE-associated protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 75..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
IPR028119	Snapin/Pallidin/Snn1	PFAM	PF14712	Snapin_Pallidin	coord: 49..132 e-value: 2.3E-21 score: 76.0
IPR017246	Snapin	PANTHER	PTHR31305	SNARE-ASSOCIATED PROTEIN SNAPIN	coord: 5..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g08560.1	Moc11g08560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0031083	BLOC-1 complex