Moc11g04360 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g04360
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Protein RKD2-like isoform X1
Location	chr11: 2798635 .. 2799549 (-)
RNA-Seq Expression	Moc11g04360
Synteny	Moc11g04360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAATTCAGGGGACGGCGAGTTCCCACTCTGGAAATTGCATCAAAATTACCCTCTCTTCACCGATGACATTCTCAATTTCATGGCCCAAATCAGGCCCACCGCCGCCGAAATAATGGCCAAGGCCGCAGCAGACCAAAAAGAACCCGACACTCCTCCCCTTCCGCCGCCACCATCCGAAGCCGCCGCCGCCGACGTGGATTATTGGGGTTCTACGGCGGGACCCTCGAGTTACAATTTCCCCGGCGAAACCAGTCGCCGGGACCAAGGACACGAAAATTTTGAAACCCAAAATCCCGATCACGGCGGCGGCGGCGGTTACAGTAGGGAACTTTCGATCACCCCTGAATTGGATACATTTCAACCCATCAGTTGCAGTTGCTGCCTAGTTCTCAGAGAAATTGTTCATACCAATGGTTGGTATTGAGAAATTGAATGGGTCATTAAATAAATTTCAAATTAATGTGGTTTTCGATTCTTGATGGCAGGTGTGAATACGAGGAAGCTTGAGATCCATGGAAGATTTGGAATACTGTGCCATGCGATTCTGCAGGAGTATTTTCCCAGCCCGAATTCTTCGAACATCACGCAGTACAAAATGTTTGAGTAAGTTCAAATTTATTCAATTCTTTTTTTTAAGGGGTTGAAGAAATGAAGAATGTTGTTAGTTAATTTGATTTTGGAAATCAGTTTCTCGAAGAAGAGTACGGACGAAGTGAAGCGGTTCATGATGCAGCATTATTTGAACCAGATGTTCGATGAGTACACTGCTCTGCCGGAGCCGCTGTCGGATTTTTATGATGTTCTGTGCATTGGATTGGATTGGGATGATCACAGCCCCACGTTTTCGACCGACAACTGCCCTCTCCCAGTCCCTCTCTACCCAGGTTCCTTCTTCTTCTTCATTTCTTAA

mRNA sequence

ATGGCAAATTCAGGGGACGGCGAGTTCCCACTCTGGAAATTGCATCAAAATTACCCTCTCTTCACCGATGACATTCTCAATTTCATGGCCCAAATCAGGCCCACCGCCGCCGAAATAATGGCCAAGGCCGCAGCAGACCAAAAAGAACCCGACACTCCTCCCCTTCCGCCGCCACCATCCGAAGCCGCCGCCGCCGACGTGGATTATTGGGGTTCTACGGCGGGACCCTCGAGTTACAATTTCCCCGGCGAAACCAGTCGCCGGGACCAAGGACACGAAAATTTTGAAACCCAAAATCCCGATCACGGCGGCGGCGGCGGTTACAGTAGGGAACTTTCGATCACCCCTGAATTGGATACATTTCAACCCATCAGTTGCAGTTGCTGCCTAGTTCTCAGAGAAATTGTTCATACCAATGGTGTGAATACGAGGAAGCTTGAGATCCATGGAAGATTTGGAATACTGTGCCATGCGATTCTGCAGGAGTATTTTCCCAGCCCGAATTCTTCGAACATCACGCAGTACAAAATGTTTGATTTCTCGAAGAAGAGTACGGACGAAGTGAAGCGGTTCATGATGCAGCATTATTTGAACCAGATGTTCGATGAGTACACTGCTCTGCCGGAGCCGCTGTCGGATTTTTATGATGTTCTGTGCATTGGATTGGATTGGGATGATCACAGCCCCACGTTTTCGACCGACAACTGCCCTCTCCCAGTCCCTCTCTACCCAGGTTCCTTCTTCTTCTTCATTTCTTAA

Coding sequence (CDS)

ATGGCAAATTCAGGGGACGGCGAGTTCCCACTCTGGAAATTGCATCAAAATTACCCTCTCTTCACCGATGACATTCTCAATTTCATGGCCCAAATCAGGCCCACCGCCGCCGAAATAATGGCCAAGGCCGCAGCAGACCAAAAAGAACCCGACACTCCTCCCCTTCCGCCGCCACCATCCGAAGCCGCCGCCGCCGACGTGGATTATTGGGGTTCTACGGCGGGACCCTCGAGTTACAATTTCCCCGGCGAAACCAGTCGCCGGGACCAAGGACACGAAAATTTTGAAACCCAAAATCCCGATCACGGCGGCGGCGGCGGTTACAGTAGGGAACTTTCGATCACCCCTGAATTGGATACATTTCAACCCATCAGTTGCAGTTGCTGCCTAGTTCTCAGAGAAATTGTTCATACCAATGGTGTGAATACGAGGAAGCTTGAGATCCATGGAAGATTTGGAATACTGTGCCATGCGATTCTGCAGGAGTATTTTCCCAGCCCGAATTCTTCGAACATCACGCAGTACAAAATGTTTGATTTCTCGAAGAAGAGTACGGACGAAGTGAAGCGGTTCATGATGCAGCATTATTTGAACCAGATGTTCGATGAGTACACTGCTCTGCCGGAGCCGCTGTCGGATTTTTATGATGTTCTGTGCATTGGATTGGATTGGGATGATCACAGCCCCACGTTTTCGACCGACAACTGCCCTCTCCCAGTCCCTCTCTACCCAGGTTCCTTCTTCTTCTTCATTTCTTAA

Protein sequence

MANSGDGEFPLWKLHQNYPLFTDDILNFMAQIRPTAAEIMAKAAADQKEPDTPPLPPPPSEAAAADVDYWGSTAGPSSYNFPGETSRRDQGHENFETQNPDHGGGGGYSRELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFPSPNSSNITQYKMFDFSKKSTDEVKRFMMQHYLNQMFDEYTALPEPLSDFYDVLCIGLDWDDHSPTFSTDNCPLPVPLYPGSFFFFIS

Homology

[Close]

BLAST of Moc11g04360 vs. NCBI nr
Match: TYK20065.1 (protein RKD2-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 321.2 bits (822), Expect = 7.8e-84
Identity = 172/259 (66.41%), Postives = 195/259 (75.29%), Query Frame = 0


Query: 1   MANSGDGEFPLWKLHQNYPLFTDDILNFMAQIRPTAAEIMAKA-AADQKEPDTPPLPPPP 60
           MA+SGDGEFPLWK HQNYPLFTDDILNFMAQI+PTAAE+MAK+ AADQ     PP     
Sbjct: 1   MADSGDGEFPLWKFHQNYPLFTDDILNFMAQIKPTAAELMAKSPAADQSL--LPPTSTSG 60

Query: 61  SEAAAADVDYWGSTAGPSS----YNFPGETSRRD-QGHENFETQNPDHGGGGG-----YS 120
              +AADVDYW ST GPS     Y FPGETSR + Q  +NF+     +G GG      Y+
Sbjct: 61  EATSAADVDYWNSTVGPSDSSNYYFFPGETSRWECQEQQNFQIPGYYYGDGGDDDRGVYN 120

Query: 121 RELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFP---S 180
            +L I PE +TFQPI+CSCCLVLREI+HTNG+NTRKLEIHGRFGIL HAIL+E FP    
Sbjct: 121 MQLPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGG 180

Query: 181 PNSSNITQYKMFDFSKKSTDEVKRFMMQHYLNQMFDEYTALPEPLSDFYDVLCIGLDW-D 240
            NSS+ TQYKMFD SKKST+EVKRFMMQHYLNQM +EY+ALPEPLSDFYD+LCIGLDW D
Sbjct: 181 TNSSSFTQYKMFDLSKKSTEEVKRFMMQHYLNQMVEEYSALPEPLSDFYDILCIGLDWND 240

Query: 241 DHSPTFSTDNCPLPVPLYP 245
           D +P  S    P P+  YP
Sbjct: 241 DDAPLVSH---PQPLSSYP 254

[Close]

BLAST of Moc11g04360 vs. NCBI nr
Match: KAA0064525.1 (protein RKD2-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 321.2 bits (822), Expect = 7.8e-84
Identity = 172/259 (66.41%), Postives = 195/259 (75.29%), Query Frame = 0


Query: 1   MANSGDGEFPLWKLHQNYPLFTDDILNFMAQIRPTAAEIMAKA-AADQKEPDTPPLPPPP 60
           MA+SGDGEFPLWK HQNYPLFTDDILNFMAQI+PTAAE+MAK+ AADQ     PP     
Sbjct: 1   MADSGDGEFPLWKFHQNYPLFTDDILNFMAQIKPTAAELMAKSPAADQSL--LPPTSTSG 60

Query: 61  SEAAAADVDYWGSTAGPSS----YNFPGETSRRD-QGHENFETQNPDHGGGGG-----YS 120
              +AADVDYW ST GPS     Y FPGETSR + Q  +NF+     +G GG      Y+
Sbjct: 61  EATSAADVDYWNSTVGPSDSSNYYFFPGETSRWECQEQQNFQIPGYYYGDGGDDDRGVYN 120

Query: 121 RELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFP---S 180
            +L I PE +TFQPI+CSCCLVLREI+HTNG+NTRKLEIHGRFGIL HAIL+E FP    
Sbjct: 121 MQLPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGG 180

Query: 181 PNSSNITQYKMFDFSKKSTDEVKRFMMQHYLNQMFDEYTALPEPLSDFYDVLCIGLDW-D 240
            NSS+ TQYKMFD SKKST+EVKRFMMQHYLNQM +EY+ALPEPLSDFYD+LCIGLDW D
Sbjct: 181 TNSSSFTQYKMFDLSKKSTEEVKRFMMQHYLNQMVEEYSALPEPLSDFYDILCIGLDWND 240

Query: 241 DHSPTFSTDNCPLPVPLYP 245
           D +P  S    P P+  YP
Sbjct: 241 DDAPLVSH---PQPLSSYP 254

[Close]

BLAST of Moc11g04360 vs. NCBI nr
Match: KAG6608345.1 (Protein RKD4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 319.7 bits (818), Expect = 2.3e-83
Identity = 166/249 (66.67%), Postives = 192/249 (77.11%), Query Frame = 0


Query: 1   MANSGDGEFPLWKLHQNYPLFTDD-ILNFMAQIRPTAAEIMAKAAADQKEPDTPPLPPPP 60
           MA+SGD EFPLW  HQN PLFTDD IL+FMA I+PTAAE++A +AA+ ++      PPP 
Sbjct: 1   MADSGDSEFPLWNFHQNSPLFTDDNILSFMANIKPTAAELIANSAANDQK-----FPPPS 60

Query: 61  SEAAAADVDYWGSTA-GPSSYN-FPGETSRRDQGHENFETQNPDHGG-GGGY-SRELSIT 120
           S +  A+++YW ST   PSSY+ FPGET             NP +GG GGGY S + SIT
Sbjct: 61  STSGEAEIEYWSSTVLDPSSYHCFPGET----------HFPNPGYGGDGGGYSSTQFSIT 120

Query: 121 PELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFPSPNSSNITQY 180
           PE+ TFQPI+CSCCL+LREIVHTNG+NTRKLEIHGRFGIL HAILQE FP+ N SNI QY
Sbjct: 121 PEIHTFQPITCSCCLILREIVHTNGINTRKLEIHGRFGILWHAILQETFPT-NPSNINQY 180

Query: 181 KMFDFSKKSTDEVKRFMMQHYLNQMFDEYTALPEPLSDFYDVLCIGLDWDDHSPTFSTDN 240
           KMFDFSKK TDEVK+F+MQHYLNQMFDEYTA+PEPLSDFYDVLCIGLDW+D SP  S  N
Sbjct: 181 KMFDFSKKGTDEVKQFIMQHYLNQMFDEYTAIPEPLSDFYDVLCIGLDWNDESPLLSPHN 233

Query: 241 CPLPVPLYP 245
              P+PL P
Sbjct: 241 YSQPLPLDP 233

[Close]

BLAST of Moc11g04360 vs. NCBI nr
Match: KAG7037698.1 (Protein RKD3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 308.5 bits (789), Expect = 5.2e-80
Identity = 163/249 (65.46%), Postives = 190/249 (76.31%), Query Frame = 0


Query: 1   MANSGDGEFPLWKLHQNYPLFTDD-ILNFMAQIRPTAAEIMAKAAADQKEPDTPPLPPPP 60
           MA+SGD EFPLW  HQN PLFTDD IL+FMA I+PTAAE++A +AA+ ++      PPP 
Sbjct: 1   MADSGDSEFPLWNFHQNSPLFTDDNILSFMANIKPTAAELIANSAANDQK-----FPPPS 60

Query: 61  SEAAAADVDYWGSTA-GPSSYN-FPGETSRRDQGHENFETQNPDHGG-GGGY-SRELSIT 120
           S +  A+++YW ST   PSSY+ FPGET             NP +GG GGGY S + SIT
Sbjct: 61  STSGEAEIEYWSSTVLDPSSYHCFPGET----------HFPNPGYGGDGGGYSSTQFSIT 120

Query: 121 PELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFPSPNSSNITQY 180
           PE+ TFQPI+CSCCL+LREIVHTNG+NTRKLEIHGRFGIL HAILQE FP+ N SNI QY
Sbjct: 121 PEIHTFQPITCSCCLILREIVHTNGINTRKLEIHGRFGILWHAILQETFPT-NPSNINQY 180

Query: 181 KMFDFSKKSTDEVKRFMMQHYLNQMFDEYTALPEPLSDFYDVLCIGLDWDDHSPTFSTDN 240
           K+  FSKK TDEVK+F+MQHYLNQMFDEYTA+PEPLSDFYDVLCIGLDW+D SP  S  N
Sbjct: 181 KI--FSKKGTDEVKQFIMQHYLNQMFDEYTAIPEPLSDFYDVLCIGLDWNDESPLLSPHN 231

Query: 241 CPLPVPLYP 245
              P+PL P
Sbjct: 241 YSQPLPLDP 231

[Close]

BLAST of Moc11g04360 vs. NCBI nr
Match: KGN55365.1 (hypothetical protein Csa_012027 [Cucumis sativus])

HSP 1 Score: 222.2 bits (565), Expect = 4.9e-54
Identity = 122/189 (64.55%), Postives = 142/189 (75.13%), Query Frame = 0


Query: 1   MANSGDGEFPLWKLHQNYPLFTDDILNFMAQIRPTAAEIMAKA-AADQKEPDTPPLPPPP 60
           MA+SGDGEFP W+ H+NYPLFTDDILNFMAQI+PTAAE+MAK+ AADQ     PP     
Sbjct: 1   MADSGDGEFPSWQFHRNYPLFTDDILNFMAQIKPTAAELMAKSPAADQSL--LPPTFTSG 60

Query: 61  SEAAAADVDYWGSTAGPSS----YNFPGETSRRD-QGHENFETQN-PDHGGGGGYSRELS 120
              +AADV+YW ST  PS     Y FPGETSR + Q  +NF+T     H  GG Y+ +L 
Sbjct: 61  EATSAADVEYWNSTVEPSGSSNYYFFPGETSRWECQEPQNFQTPGYYGHDHGGVYNMQLP 120

Query: 121 ITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFPS---PNSS 180
           ITPE +TFQPI+CSCCLVLREIVHTNG+NTRKLEIHGRFGIL HAIL+E FP+    NSS
Sbjct: 121 ITPESNTFQPIACSCCLVLREIVHTNGINTRKLEIHGRFGILWHAILEENFPTLGGTNSS 180

[Close]

BLAST of Moc11g04360 vs. ExPASy TrEMBL
Match: A0A5D3D916 (Protein RKD2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001880 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 3.8e-84
Identity = 172/259 (66.41%), Postives = 195/259 (75.29%), Query Frame = 0


Query: 1   MANSGDGEFPLWKLHQNYPLFTDDILNFMAQIRPTAAEIMAKA-AADQKEPDTPPLPPPP 60
           MA+SGDGEFPLWK HQNYPLFTDDILNFMAQI+PTAAE+MAK+ AADQ     PP     
Sbjct: 1   MADSGDGEFPLWKFHQNYPLFTDDILNFMAQIKPTAAELMAKSPAADQSL--LPPTSTSG 60

Query: 61  SEAAAADVDYWGSTAGPSS----YNFPGETSRRD-QGHENFETQNPDHGGGGG-----YS 120
              +AADVDYW ST GPS     Y FPGETSR + Q  +NF+     +G GG      Y+
Sbjct: 61  EATSAADVDYWNSTVGPSDSSNYYFFPGETSRWECQEQQNFQIPGYYYGDGGDDDRGVYN 120

Query: 121 RELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFP---S 180
            +L I PE +TFQPI+CSCCLVLREI+HTNG+NTRKLEIHGRFGIL HAIL+E FP    
Sbjct: 121 MQLPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGG 180

Query: 181 PNSSNITQYKMFDFSKKSTDEVKRFMMQHYLNQMFDEYTALPEPLSDFYDVLCIGLDW-D 240
            NSS+ TQYKMFD SKKST+EVKRFMMQHYLNQM +EY+ALPEPLSDFYD+LCIGLDW D
Sbjct: 181 TNSSSFTQYKMFDLSKKSTEEVKRFMMQHYLNQMVEEYSALPEPLSDFYDILCIGLDWND 240

Query: 241 DHSPTFSTDNCPLPVPLYP 245
           D +P  S    P P+  YP
Sbjct: 241 DDAPLVSH---PQPLSSYP 254

[Close]

BLAST of Moc11g04360 vs. ExPASy TrEMBL
Match: A0A5A7VF79 (Protein RKD2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G002430 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 3.8e-84
Identity = 172/259 (66.41%), Postives = 195/259 (75.29%), Query Frame = 0


Query: 1   MANSGDGEFPLWKLHQNYPLFTDDILNFMAQIRPTAAEIMAKA-AADQKEPDTPPLPPPP 60
           MA+SGDGEFPLWK HQNYPLFTDDILNFMAQI+PTAAE+MAK+ AADQ     PP     
Sbjct: 1   MADSGDGEFPLWKFHQNYPLFTDDILNFMAQIKPTAAELMAKSPAADQSL--LPPTSTSG 60

Query: 61  SEAAAADVDYWGSTAGPSS----YNFPGETSRRD-QGHENFETQNPDHGGGGG-----YS 120
              +AADVDYW ST GPS     Y FPGETSR + Q  +NF+     +G GG      Y+
Sbjct: 61  EATSAADVDYWNSTVGPSDSSNYYFFPGETSRWECQEQQNFQIPGYYYGDGGDDDRGVYN 120

Query: 121 RELSITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFP---S 180
            +L I PE +TFQPI+CSCCLVLREI+HTNG+NTRKLEIHGRFGIL HAIL+E FP    
Sbjct: 121 MQLPIAPESNTFQPITCSCCLVLREIIHTNGINTRKLEIHGRFGILWHAILEENFPILGG 180

Query: 181 PNSSNITQYKMFDFSKKSTDEVKRFMMQHYLNQMFDEYTALPEPLSDFYDVLCIGLDW-D 240
            NSS+ TQYKMFD SKKST+EVKRFMMQHYLNQM +EY+ALPEPLSDFYD+LCIGLDW D
Sbjct: 181 TNSSSFTQYKMFDLSKKSTEEVKRFMMQHYLNQMVEEYSALPEPLSDFYDILCIGLDWND 240

Query: 241 DHSPTFSTDNCPLPVPLYP 245
           D +P  S    P P+  YP
Sbjct: 241 DDAPLVSH---PQPLSSYP 254

[Close]

BLAST of Moc11g04360 vs. ExPASy TrEMBL
Match: A0A0A0L065 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G646390 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 2.4e-54
Identity = 122/189 (64.55%), Postives = 142/189 (75.13%), Query Frame = 0


Query: 1   MANSGDGEFPLWKLHQNYPLFTDDILNFMAQIRPTAAEIMAKA-AADQKEPDTPPLPPPP 60
           MA+SGDGEFP W+ H+NYPLFTDDILNFMAQI+PTAAE+MAK+ AADQ     PP     
Sbjct: 1   MADSGDGEFPSWQFHRNYPLFTDDILNFMAQIKPTAAELMAKSPAADQSL--LPPTFTSG 60

Query: 61  SEAAAADVDYWGSTAGPSS----YNFPGETSRRD-QGHENFETQN-PDHGGGGGYSRELS 120
              +AADV+YW ST  PS     Y FPGETSR + Q  +NF+T     H  GG Y+ +L 
Sbjct: 61  EATSAADVEYWNSTVEPSGSSNYYFFPGETSRWECQEPQNFQTPGYYGHDHGGVYNMQLP 120

Query: 121 ITPELDTFQPISCSCCLVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFPS---PNSS 180
           ITPE +TFQPI+CSCCLVLREIVHTNG+NTRKLEIHGRFGIL HAIL+E FP+    NSS
Sbjct: 121 ITPESNTFQPIACSCCLVLREIVHTNGINTRKLEIHGRFGILWHAILEENFPTLGGTNSS 180

[Close]

BLAST of Moc11g04360 vs. ExPASy TrEMBL
Match: A0A5A7V999 (Protein RKD2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00220 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 4.5e-29
Identity = 73/162 (45.06%), Postives = 105/162 (64.81%), Query Frame = 0


Query: 70  WGSTAGPSSYNFPGETSRRDQGHENFETQNPDHGGGGGYSRELSITPELDTFQPISCSCC 129
           + S AGPS+     E  ++D  + N  +           S+ L I P   T  P  CSCC
Sbjct: 80  YDSEAGPSNIGGEEEDHQQDDNYMNIPSDVE--------SKLLPIWPL--TPLPFLCSCC 139

Query: 130 LVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFPSPNSSNIT-QYKMFDFSKKSTDEV 189
            VLRE +HTNGVN+RKLEIHGR G++ HAIL E+ P  N  NI+ QY+MFDF +KS +E+
Sbjct: 140 QVLREFLHTNGVNSRKLEIHGRLGMISHAIL-EHKPIVNVDNISPQYQMFDFCEKSCEEI 199

Query: 190 KRFMMQHYLNQMFDEYTALPEPLSDFYDVLCIGLDWDDHSPT 231
           K+F++Q+ L Q+ ++Y  +P+P+S+FYD LC+G+DW ++  T
Sbjct: 200 KQFLLQYCLKQILEDYNMIPDPMSNFYDALCVGIDWFENLNT 230

[Close]

BLAST of Moc11g04360 vs. ExPASy TrEMBL
Match: A0A1S3BCY1 (uncharacterized protein LOC103488516 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488516 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 4.5e-29
Identity = 73/162 (45.06%), Postives = 105/162 (64.81%), Query Frame = 0


Query: 70  WGSTAGPSSYNFPGETSRRDQGHENFETQNPDHGGGGGYSRELSITPELDTFQPISCSCC 129
           + S AGPS+     E  ++D  + N  +           S+ L I P   T  P  CSCC
Sbjct: 80  YDSEAGPSNIGGEEEDHQQDDNYMNIPSDVE--------SKLLPIWPL--TPLPFLCSCC 139

Query: 130 LVLREIVHTNGVNTRKLEIHGRFGILCHAILQEYFPSPNSSNIT-QYKMFDFSKKSTDEV 189
            VLRE +HTNGVN+RKLEIHGR G++ HAIL E+ P  N  NI+ QY+MFDF +KS +E+
Sbjct: 140 QVLREFLHTNGVNSRKLEIHGRLGMISHAIL-EHKPIVNVDNISPQYQMFDFCEKSCEEI 199

Query: 190 KRFMMQHYLNQMFDEYTALPEPLSDFYDVLCIGLDWDDHSPT 231
           K+F++Q+ L Q+ ++Y  +P+P+S+FYD LC+G+DW ++  T
Sbjct: 200 KQFLLQYCLKQILEDYNMIPDPMSNFYDALCVGIDWFENLNT 230

[Close]

BLAST of Moc11g04360 vs. TAIR 10
Match: AT5G16100.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 53.5 bits (127), Expect = 2.8e-07
Identity = 42/162 (25.93%), Postives = 76/162 (46.91%), Query Frame = 0


Query: 59  PSEAAAADVDYWGSTAGPSSYNFPGETSRRDQGHENFETQNP-DHGGGGGYSRELSITPE 118
           P++    + D  G     +  N  G+++R +     F   N  D   GG  +  + +T  
Sbjct: 110 PNDEHNDNNDVPGEIGNDNGKNVVGDSTRLELSTRVFGGANGLDFEIGGSATMPVPVTTT 169

Query: 119 LDTFQPISCSCCLVLREIVH-TNGVNTRKLEIHGRFGILCHAILQEYFPSPNSSNITQYK 178
           +      +C+CC +LRE+VH   G    KL+I+G  G +CHAIL     +P+S    Q  
Sbjct: 170 ISD-GVHACNCCRLLRELVHLKEGEERSKLDIYGGIGFICHAILLIQLLAPDSMQ-RQPL 229

Query: 179 MFDFSKKSTDEVKRFMMQHYLNQMFDEYTALPEPLSDFYDVL 219
           +F     + +EVK+F+  +   ++ +  + L +  + FY  +
Sbjct: 230 IFHLQHLTMEEVKKFIEDYCYQRVANGLSLLQDTNAAFYQAM 269

The following BLAST results are available for this feature:

BLAST of Moc11g04360 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK20065.1	7.8e-84	66.41	protein RKD2-like isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0064525.1	7.8e-84	66.41	protein RKD2-like isoform X1 [Cucumis melo var. makuwa]	[more]
KAG6608345.1	2.3e-83	66.67	Protein RKD4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7037698.1	5.2e-80	65.46	Protein RKD3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KGN55365.1	4.9e-54	64.55	hypothetical protein Csa_012027 [Cucumis sativus]	[more]

BLAST of Moc11g04360 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g04360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D916	3.8e-84	66.41	Protein RKD2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7VF79	3.8e-84	66.41	Protein RKD2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A0A0L065	2.4e-54	64.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G646390 PE=4 SV=1	[more]
A0A5A7V999	4.5e-29	45.06	Protein RKD2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3BCY1	4.5e-29	45.06	uncharacterized protein LOC103488516 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Moc11g04360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16100.1	2.8e-07	25.93	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..111
None	No IPR available	PANTHER	PTHR46373:SF14	SUBFAMILY NOT NAMED	coord: 2..191
IPR044607	Transcription factor RKD-like	PANTHER	PTHR46373	PROTEIN RKD4	coord: 2..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g04360.1	Moc11g04360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003700	DNA-binding transcription factor activity