Moc11g04350 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g04350
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	RWP-RK domain-containing protein
Location	chr11: 2797196 .. 2797751 (-)
RNA-Seq Expression	Moc11g04350
Synteny	Moc11g04350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGCCGGAGCAACAAGATCCGGCACCGGAATCAGGACGCCGGCGAATTCCCCAGACAGCACTGGCAAGACAGGTCAATGAAATTTTCCTATCATATGCAGACAATTTGAATTTGTTCTGTTTCTGAATACGCAAAATTCCTCTGCTTTTTCCGATGGGAGCAGAGGCAGAGGGCCGGGCGGATGACGGTGAACGATTTGAAGGACTATCTTCACCTTCCGATCAGCGAGGCGGCGAAGAAGATGAATCTCTGTCTCACCGTCGTCAAGAAGATCTGCCGCCGGAGTGGCCTCCGCCGCTGGCCTTACAGAAAGGTCCATTTCTTTTCCATTTCTTCCATTTTCCCCCCACGAGTTTCCAATTTTGCGAATTCTTCTTGGAGAAAAATGGGATTTTTGTTTTGTGTTTAGGTGAAGAGTTATCAGAGGAAAATGGGAGCTTTAGGGACGAGATTGAGATCTAGAGATGCAGAGACGAGGAACAGAGCAGAGGCCGAGATGGAGAGGCTGCGCCAAGAACTGGCTCAGTTTTGCGCCGGAATTGTACCTGCTTAA

mRNA sequence

ATGCTGCCGGAGCAACAAGATCCGGCACCGGAATCAGGACGCCGGCGAATTCCCCAGACAGCACTGGCAAGACAGAGGCAGAGGGCCGGGCGGATGACGGTGAACGATTTGAAGGACTATCTTCACCTTCCGATCAGCGAGGCGGCGAAGAAGATGAATCTCTGTCTCACCGTCGTCAAGAAGATCTGCCGCCGGAGTGGCCTCCGCCGCTGGCCTTACAGAAAGGTGAAGAGTTATCAGAGGAAAATGGGAGCTTTAGGGACGAGATTGAGATCTAGAGATGCAGAGACGAGGAACAGAGCAGAGGCCGAGATGGAGAGGCTGCGCCAAGAACTGGCTCAGTTTTGCGCCGGAATTGTACCTGCTTAA

Coding sequence (CDS)

ATGCTGCCGGAGCAACAAGATCCGGCACCGGAATCAGGACGCCGGCGAATTCCCCAGACAGCACTGGCAAGACAGAGGCAGAGGGCCGGGCGGATGACGGTGAACGATTTGAAGGACTATCTTCACCTTCCGATCAGCGAGGCGGCGAAGAAGATGAATCTCTGTCTCACCGTCGTCAAGAAGATCTGCCGCCGGAGTGGCCTCCGCCGCTGGCCTTACAGAAAGGTGAAGAGTTATCAGAGGAAAATGGGAGCTTTAGGGACGAGATTGAGATCTAGAGATGCAGAGACGAGGAACAGAGCAGAGGCCGAGATGGAGAGGCTGCGCCAAGAACTGGCTCAGTTTTGCGCCGGAATTGTACCTGCTTAA

Protein sequence

MLPEQQDPAPESGRRRIPQTALARQRQRAGRMTVNDLKDYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRNRAEAEMERLRQELAQFCAGIVPA

Homology

[Close]

BLAST of Moc11g04350 vs. NCBI nr
Match: XP_022143764.1 (protein RKD1-like [Momordica charantia])

HSP 1 Score: 237.7 bits (605), Expect = 5.5e-59
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MLPEQQDPAPESGRRRIPQTALARQRQRAGRMTVNDLKDYLHLPISEAAKKMNLCLTVVK 60
           MLPEQQDPAPESGRRRIPQTALARQRQRAGRMTVNDLKDYLHLPISEAAKKMNLCLTVVK
Sbjct: 1   MLPEQQDPAPESGRRRIPQTALARQRQRAGRMTVNDLKDYLHLPISEAAKKMNLCLTVVK 60

Query: 61  KICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRNRAEAEMERLRQELAQFCAGIV 120
           KICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRNRAEAEMERLRQELAQFCAGIV
Sbjct: 61  KICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRNRAEAEMERLRQELAQFCAGIV 120

Query: 121 PA 123
           PA
Sbjct: 121 PA 122

[Close]

BLAST of Moc11g04350 vs. NCBI nr
Match: KAG6608345.1 (Protein RKD4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 213.4 bits (542), Expect = 1.1e-51
Identity = 109/121 (90.08%), Postives = 115/121 (95.04%), Query Frame = 0


Query: 2   LPEQQDPAPESGRRRIPQTALARQRQRAGRMTVNDLKDYLHLPISEAAKKMNLCLTVVKK 61
           + +Q D +PE GRRR+PQTALARQRQRAGRMTVNDLK+YLHLPISEAAKKMNLCLTVVKK
Sbjct: 250 MDQQPDQSPEFGRRRVPQTALARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKK 309

Query: 62  ICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRNRAEAEMERLRQELAQFCAGIVP 121
           ICRRSGLRRWPYRKVKSYQRKMGALG RLRSRDAETR RAEAEM+RLRQELAQFCAGIVP
Sbjct: 310 ICRRSGLRRWPYRKVKSYQRKMGALGMRLRSRDAETRARAEAEMDRLRQELAQFCAGIVP 369

Query: 122 A 123
           A
Sbjct: 370 A 370

[Close]

BLAST of Moc11g04350 vs. NCBI nr
Match: TYK20065.1 (protein RKD2-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 209.5 bits (532), Expect = 1.6e-50
Identity = 109/121 (90.08%), Postives = 113/121 (93.39%), Query Frame = 0


Query: 2   LPEQQDPAPE-SGRRRIPQTALARQRQRAGRMTVNDLKDYLHLPISEAAKKMNLCLTVVK 61
           + +Q  P PE  GRRR+PQT LARQRQRAGRMTVNDLK+YLHLPISEAAKKMNLCLTVVK
Sbjct: 272 MEQQSHPPPEFGGRRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVK 331

Query: 62  KICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRNRAEAEMERLRQELAQFCAGIV 121
           KICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETR RAEAEMERLRQELAQFCAGIV
Sbjct: 332 KICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIV 391

[Close]

BLAST of Moc11g04350 vs. NCBI nr
Match: KAG7037698.1 (Protein RKD3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 208.4 bits (529), Expect = 3.5e-50
Identity = 106/119 (89.08%), Postives = 113/119 (94.96%), Query Frame = 0


Query: 2   LPEQQDPAPESGRRRIPQTALARQRQRAGRMTVNDLKDYLHLPISEAAKKMNLCLTVVKK 61
           + +Q D +PE GRRR+PQTALARQRQRAGRMTVNDLK+YLHLPISEAAKKMNLCLTVVKK
Sbjct: 248 MDQQPDQSPEFGRRRVPQTALARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKK 307

Query: 62  ICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRNRAEAEMERLRQELAQFCAGIV 121
           ICRRSGLRRWPYRKVKSYQRKMGALG RLRSRDAETR RAEAEM+RLRQELAQFCAGI+
Sbjct: 308 ICRRSGLRRWPYRKVKSYQRKMGALGMRLRSRDAETRARAEAEMDRLRQELAQFCAGII 366

[Close]

BLAST of Moc11g04350 vs. NCBI nr
Match: KGN55364.1 (hypothetical protein Csa_012951 [Cucumis sativus])

HSP 1 Score: 204.1 bits (518), Expect = 6.7e-49
Identity = 107/121 (88.43%), Postives = 111/121 (91.74%), Query Frame = 0


Query: 2   LPEQQDPAPE-SGRRRIPQTALARQRQRAGRMTVNDLKDYLHLPISEAAKKMNLCLTVVK 61
           + +Q  P PE  G RR+PQT LARQRQRAGRMTVNDLK+YLHLPISEAAKKMNLCLTVVK
Sbjct: 62  MEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVK 121

Query: 62  KICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRNRAEAEMERLRQELAQFCAGIV 121
           KICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDA TR RAEAEMERLRQELAQFCAGIV
Sbjct: 122 KICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGIV 181

[Close]

BLAST of Moc11g04350 vs. ExPASy Swiss-Prot
Match: Q9LVU8 (Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.6e-07
Identity = 23/54 (42.59%), Postives = 41/54 (75.93%), Query Frame = 0


Query: 25  QRQRAGRMTVNDLKDYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKS 79
           +++R  ++ ++++K +   PI +AAK++N+ LTV+KK CR  G+ RWP+RK+KS
Sbjct: 141 KKKRQDKLEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKS 194

[Close]

BLAST of Moc11g04350 vs. ExPASy Swiss-Prot
Match: Q9M9U9 (Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.9e-06
Identity = 24/72 (33.33%), Postives = 47/72 (65.28%), Query Frame = 0


Query: 40  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRN 99
           Y ++PI++AA+++N+ LT++KK CR  G++RWP+RK+ S Q+ +  +    +    E  +
Sbjct: 136 YFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLISNVKELEKMEGEENED 195

Query: 100 RAEAEMERLRQE 112
           +    +E+L +E
Sbjct: 196 KLRNALEKLEKE 207

[Close]

BLAST of Moc11g04350 vs. ExPASy Swiss-Prot
Match: Q9FGD1 (Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.6e-05
Identity = 33/103 (32.04%), Postives = 59/103 (57.28%), Query Frame = 0


Query: 11  ESGRRRIPQTALARQRQRAGRMTVNDLKDYLHLPISEAAKKMNLCLTVVKKICRRSGLRR 70
           ++ ++RI      R+      M+   +K Y ++PI++AAK++N+ +T++KK CR  G+ R
Sbjct: 138 KTSQKRIIMKRRYREDGVINNMSREMMKQYFYMPITKAAKELNIGVTLLKKRCRELGIPR 197

Query: 71  WPYRKVKSYQRKMGAL-----GTRLRSRDAETRNRAE-AEMER 108
           WP+RK+ S    +  L      T+ R+  ++ RN  E  EME+
Sbjct: 198 WPHRKLTSLNALIANLKDLLGNTKGRTPKSKLRNALELLEMEK 240

[Close]

BLAST of Moc11g04350 vs. ExPASy Swiss-Prot
Match: Q9M1B0 (Protein NLP9 OS=Arabidopsis thaliana OX=3702 GN=NLP9 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.8e-05
Identity = 26/81 (32.10%), Postives = 46/81 (56.79%), Query Frame = 0


Query: 12  SGRRRIPQTALARQRQRAGRMTVNDLKDYLHLPISEAAKKMNLCLTVVKKICRRSGLRRW 71
           SG RR+ +   + ++     +++N L+ Y    + +AAK + +C T +K+ICR+ G+ RW
Sbjct: 520 SGARRLEKKKSSTEK----NVSLNVLQQYFSGSLKDAAKSLGVCPTTLKRICRQHGIMRW 579

Query: 72  PYRKVKSYQRKMGALGTRLRS 93
           P RK+    R +  + T L S
Sbjct: 580 PSRKINKVNRSLRKIQTVLDS 596

[Close]

BLAST of Moc11g04350 vs. ExPASy Swiss-Prot
Match: Q7X9B9 (Protein NLP2 OS=Arabidopsis thaliana OX=3702 GN=NLP2 PE=2 SV=3)

HSP 1 Score: 48.9 bits (115), Expect = 4.7e-05
Identity = 28/78 (35.90%), Postives = 42/78 (53.85%), Query Frame = 0


Query: 7   DPAPESGRRRIPQTALARQRQRAGRMTVND-------LKDYLHLPISEAAKKMNLCLTVV 66
           DP+ ES    + QT L  +R    R T  +       L+ Y    + +AAK + +C T +
Sbjct: 617 DPSFESASFGVGQTLLGSRRPGEKRRTKTEKTIGLEVLRQYFAGSLKDAAKSIGVCPTTL 676

Query: 67  KKICRRSGLRRWPYRKVK 78
           K+ICR+ G+ RWP RK+K
Sbjct: 677 KRICRQHGITRWPSRKIK 694

[Close]

BLAST of Moc11g04350 vs. ExPASy TrEMBL
Match: A0A6J1CQA6 (protein RKD1-like OS=Momordica charantia OX=3673 GN=LOC111013572 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.6e-59
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MLPEQQDPAPESGRRRIPQTALARQRQRAGRMTVNDLKDYLHLPISEAAKKMNLCLTVVK 60
           MLPEQQDPAPESGRRRIPQTALARQRQRAGRMTVNDLKDYLHLPISEAAKKMNLCLTVVK
Sbjct: 1   MLPEQQDPAPESGRRRIPQTALARQRQRAGRMTVNDLKDYLHLPISEAAKKMNLCLTVVK 60

Query: 61  KICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRNRAEAEMERLRQELAQFCAGIV 120
           KICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRNRAEAEMERLRQELAQFCAGIV
Sbjct: 61  KICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRNRAEAEMERLRQELAQFCAGIV 120

Query: 121 PA 123
           PA
Sbjct: 121 PA 122

[Close]

BLAST of Moc11g04350 vs. ExPASy TrEMBL
Match: A0A5D3D916 (Protein RKD2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001880 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 7.7e-51
Identity = 109/121 (90.08%), Postives = 113/121 (93.39%), Query Frame = 0


Query: 2   LPEQQDPAPE-SGRRRIPQTALARQRQRAGRMTVNDLKDYLHLPISEAAKKMNLCLTVVK 61
           + +Q  P PE  GRRR+PQT LARQRQRAGRMTVNDLK+YLHLPISEAAKKMNLCLTVVK
Sbjct: 272 MEQQSHPPPEFGGRRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVK 331

Query: 62  KICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRNRAEAEMERLRQELAQFCAGIV 121
           KICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETR RAEAEMERLRQELAQFCAGIV
Sbjct: 332 KICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIV 391

[Close]

BLAST of Moc11g04350 vs. ExPASy TrEMBL
Match: A0A0A0L2U8 (RWP-RK domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G646380 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.2e-49
Identity = 107/121 (88.43%), Postives = 111/121 (91.74%), Query Frame = 0


Query: 2   LPEQQDPAPE-SGRRRIPQTALARQRQRAGRMTVNDLKDYLHLPISEAAKKMNLCLTVVK 61
           + +Q  P PE  G RR+PQT LARQRQRAGRMTVNDLK+YLHLPISEAAKKMNLCLTVVK
Sbjct: 62  MEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVK 121

Query: 62  KICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRNRAEAEMERLRQELAQFCAGIV 121
           KICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDA TR RAEAEMERLRQELAQFCAGIV
Sbjct: 122 KICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGIV 181

[Close]

BLAST of Moc11g04350 vs. ExPASy TrEMBL
Match: A0A5A7VF79 (Protein RKD2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G002430 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 4.1e-44
Identity = 95/99 (95.96%), Postives = 97/99 (97.98%), Query Frame = 0


Query: 23  ARQRQRAGRMTVNDLKDYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRK 82
           + QRQRAGRMTVNDLK+YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRK
Sbjct: 271 SEQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRK 330

Query: 83  MGALGTRLRSRDAETRNRAEAEMERLRQELAQFCAGIVP 122
           MGALGTRLRSRDAETR RAEAEMERLRQELAQFCAGIVP
Sbjct: 331 MGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVP 369

[Close]

BLAST of Moc11g04350 vs. ExPASy TrEMBL
Match: A0A6J1BQU6 (protein RKD3-like OS=Momordica charantia OX=3673 GN=LOC111004772 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.1e-28
Identity = 72/117 (61.54%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 3   PEQQDPAPESGRRRIPQTALARQRQRAGRMTVNDLKDYLHLPISEAAKKMNLCLTVVKKI 62
           PE Q+  PE   RR    +LA QR R GRMTVND+  YLHLPISEA+KK+N+C TV+KKI
Sbjct: 118 PEFQNEPPERPPRR---PSLAAQRARTGRMTVNDVWQYLHLPISEASKKLNVCNTVLKKI 177

Query: 63  CRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRNRAEAEMERLRQELAQFCAGI 120
           CRRSGL RWPYRK++SY+R++ AL   + S   +TR RAEAE+ER+++ELA FCAGI
Sbjct: 178 CRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRARAEAEIERVQKELADFCAGI 231

[Close]

BLAST of Moc11g04350 vs. TAIR 10
Match: AT5G53040.1 (RWP-RK domain-containing protein )

HSP 1 Score: 55.1 bits (131), Expect = 4.7e-08
Identity = 23/54 (42.59%), Postives = 41/54 (75.93%), Query Frame = 0


Query: 25  QRQRAGRMTVNDLKDYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKS 79
           +++R  ++ ++++K +   PI +AAK++N+ LTV+KK CR  G+ RWP+RK+KS
Sbjct: 141 KKKRQDKLEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKS 194

[Close]

BLAST of Moc11g04350 vs. TAIR 10
Match: AT1G18790.1 (RWP-RK domain-containing protein )

HSP 1 Score: 53.5 bits (127), Expect = 1.4e-07
Identity = 24/72 (33.33%), Postives = 47/72 (65.28%), Query Frame = 0


Query: 40  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRN 99
           Y ++PI++AA+++N+ LT++KK CR  G++RWP+RK+ S Q+ +  +    +    E  +
Sbjct: 136 YFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLISNVKELEKMEGEENED 195

Query: 100 RAEAEMERLRQE 112
           +    +E+L +E
Sbjct: 196 KLRNALEKLEKE 207

[Close]

BLAST of Moc11g04350 vs. TAIR 10
Match: AT5G66990.1 (RWP-RK domain-containing protein )

HSP 1 Score: 50.4 bits (119), Expect = 1.2e-06
Identity = 33/103 (32.04%), Postives = 59/103 (57.28%), Query Frame = 0


Query: 11  ESGRRRIPQTALARQRQRAGRMTVNDLKDYLHLPISEAAKKMNLCLTVVKKICRRSGLRR 70
           ++ ++RI      R+      M+   +K Y ++PI++AAK++N+ +T++KK CR  G+ R
Sbjct: 138 KTSQKRIIMKRRYREDGVINNMSREMMKQYFYMPITKAAKELNIGVTLLKKRCRELGIPR 197

Query: 71  WPYRKVKSYQRKMGAL-----GTRLRSRDAETRNRAE-AEMER 108
           WP+RK+ S    +  L      T+ R+  ++ RN  E  EME+
Sbjct: 198 WPHRKLTSLNALIANLKDLLGNTKGRTPKSKLRNALELLEMEK 240

[Close]

BLAST of Moc11g04350 vs. TAIR 10
Match: AT3G59580.1 (Plant regulator RWP-RK family protein )

HSP 1 Score: 49.7 bits (117), Expect = 2.0e-06
Identity = 26/81 (32.10%), Postives = 46/81 (56.79%), Query Frame = 0


Query: 12  SGRRRIPQTALARQRQRAGRMTVNDLKDYLHLPISEAAKKMNLCLTVVKKICRRSGLRRW 71
           SG RR+ +   + ++     +++N L+ Y    + +AAK + +C T +K+ICR+ G+ RW
Sbjct: 520 SGARRLEKKKSSTEK----NVSLNVLQQYFSGSLKDAAKSLGVCPTTLKRICRQHGIMRW 579

Query: 72  PYRKVKSYQRKMGALGTRLRS 93
           P RK+    R +  + T L S
Sbjct: 580 PSRKINKVNRSLRKIQTVLDS 596

[Close]

BLAST of Moc11g04350 vs. TAIR 10
Match: AT3G59580.2 (Plant regulator RWP-RK family protein )

HSP 1 Score: 49.7 bits (117), Expect = 2.0e-06
Identity = 26/81 (32.10%), Postives = 46/81 (56.79%), Query Frame = 0


Query: 12  SGRRRIPQTALARQRQRAGRMTVNDLKDYLHLPISEAAKKMNLCLTVVKKICRRSGLRRW 71
           SG RR+ +   + ++     +++N L+ Y    + +AAK + +C T +K+ICR+ G+ RW
Sbjct: 520 SGARRLEKKKSSTEK----NVSLNVLQQYFSGSLKDAAKSLGVCPTTLKRICRQHGIMRW 579

Query: 72  PYRKVKSYQRKMGALGTRLRS 93
           P RK+    R +  + T L S
Sbjct: 580 PSRKINKVNRSLRKIQTVLDS 596

The following BLAST results are available for this feature:

BLAST of Moc11g04350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143764.1	5.5e-59	100.00	protein RKD1-like [Momordica charantia]	[more]
KAG6608345.1	1.1e-51	90.08	Protein RKD4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
TYK20065.1	1.6e-50	90.08	protein RKD2-like isoform X1 [Cucumis melo var. makuwa]	[more]
KAG7037698.1	3.5e-50	89.08	Protein RKD3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KGN55364.1	6.7e-49	88.43	hypothetical protein Csa_012951 [Cucumis sativus]	[more]

BLAST of Moc11g04350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVU8	6.6e-07	42.59	Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1	[more]
Q9M9U9	1.9e-06	33.33	Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1	[more]
Q9FGD1	1.6e-05	32.04	Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1	[more]
Q9M1B0	2.8e-05	32.10	Protein NLP9 OS=Arabidopsis thaliana OX=3702 GN=NLP9 PE=2 SV=1	[more]
Q7X9B9	4.7e-05	35.90	Protein NLP2 OS=Arabidopsis thaliana OX=3702 GN=NLP2 PE=2 SV=3	[more]

BLAST of Moc11g04350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQA6	2.6e-59	100.00	protein RKD1-like OS=Momordica charantia OX=3673 GN=LOC111013572 PE=4 SV=1	[more]
A0A5D3D916	7.7e-51	90.08	Protein RKD2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0L2U8	3.2e-49	88.43	RWP-RK domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G646380 PE=4...	[more]
A0A5A7VF79	4.1e-44	95.96	Protein RKD2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A6J1BQU6	1.1e-28	61.54	protein RKD3-like OS=Momordica charantia OX=3673 GN=LOC111004772 PE=4 SV=1	[more]

BLAST of Moc11g04350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53040.1	4.7e-08	42.59	RWP-RK domain-containing protein	[more]
AT1G18790.1	1.4e-07	33.33	RWP-RK domain-containing protein	[more]
AT5G66990.1	1.2e-06	32.04	RWP-RK domain-containing protein	[more]
AT3G59580.1	2.0e-06	32.10	Plant regulator RWP-RK family protein	[more]
AT3G59580.2	2.0e-06	32.10	Plant regulator RWP-RK family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 91..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR46373:SF5	RWP-RK DOMAIN PROTEIN	coord: 10..118
IPR003035	RWP-RK domain	PFAM	PF02042	RWP-RK	coord: 32..78 e-value: 6.4E-20 score: 70.9
IPR003035	RWP-RK domain	PROSITE	PS51519	RWP_RK	coord: 19..99 score: 16.938206
IPR044607	Transcription factor RKD-like	PANTHER	PTHR46373	PROTEIN RKD4	coord: 10..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g04350.1	Moc11g04350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity