Moc11g04040 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g04040
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr11: 2615412 .. 2617914 (-)
RNA-Seq Expression	Moc11g04040
Synteny	Moc11g04040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCGCATCTTCTTCGCATTTTGAGGTATGCCTCGTCCTCCTCGCCATCTCTCGTCATTGCATGCCTACAGTTCTTGAATCGGATTCAATACCAGGCGGATTCGATCGTCTTTCTTTCGGGGCACTGAAATCCAGTGCATCGAAATAATCTAACCAATGTTGAAACCTCCCGTTGAACTGGGTTCGGAAAGTTATTGGGGCATGGTGCTGCGATGGATACGGAGGTTGTCGTGCAATTCGTGGGTCAACCAAGCGTAACCGATCATGCCTGTTGATTCTTCAGGGTGGTCTTCTCTGCGTACGTAATTAAGAAGAAGGAAGCGGCGAATTAGGACGGACGAGGGCCGAGGCAACCGGCACTGCTTGTTTTGCATTTGTTCTGTACATTTAAGCCCCATTCAGATCATGAGCTGTTTCGATTTATAATACACGGGTAATGGAAGGATCTCTCACTTTGTGACAGTATAATTCCATTAAAATTGCGTCTGATGGTGAAATGTAAAATTTTAAAGGATGCTGGTCATGTGGGCATACTTTTTAGAGAGTCTCCCTTTTGGTCATGCTCGAGGTTATTATTAGGTGATTTAATAATTCGTTTTTTCTTATTATCAGGCACTTTCATTCCGTTCCTTTTTGAATTACAACTTGCAGGAGATGTTTAGATCCGCTGGGTTTGACCCTTTCCCTTTGCTGTTGCTTAGATAATTTCTTTTGAAGTACATCAACTTTCTATTTGGTTCATTCAATTCCCTTGATATTGGAATTGGGTATACCATTGGATTCTTTTTTATGCTTGTCCTACCTCTGTTATTTCTTTAGAGAATTCTAACCATAAACGAATAATTAGAGAAGATTTAACCGTGTACTTCACATGTTTTCTAATTCAGAATACAGATGATACTTCGATAGGGATCTAGAAAGCAAAAAAGCATGTACACTCAATTAGGAGATTAGATTTCTTATAATCAGATTATATAGTTTCTTTTTGTCCATTTCAGTAGAGCTGTATGTATTATCTTCTGTATCATTTCGTTAATTAAAATTGTACATGTGTTATGACTGTTTATGAGTATTGTAACTTAGGATTTTCTCATTATTTGTTTCTTATTGATATTGACTTTTCATGGAAGGTCCCCTTTGAACCGCTCAGCCGATGCCTTGAAATTGTGCAGGCAAGAGGGGACCATCACCACAATTTGTGTATTGTATCAGTGTCAGCACATTGGACCATATCTGCCAGTGCTGCTACGTTTAAATGAAAAATTTCCTCGGAATTCCTTTCAAGGGGGAACATCAATATGAGAATTAGAGGAAGACAATCGTACTTTGTATATCTTTGATGGTGCAAATTGTTGTGCCTTTAGACATTTTGAATACTTGGATATGAGGTTATACCCTCTTATCTTATCCCGTTTGTGGGATAAATTCTGGTCTATACTTCCTTCTTGTTGCTTCTCTCTCGAGAAGCCACTTAGTACCATCTTGACTTCTACTTAGAGCCTTGTGATAATTTTGCTGACATTTGACATTTAAATAACAGATAGTGAAGATGGGGTCTGACTTCTGAAGGTCTCGGAGAGAGACGTTAAAGATTGTAACTCTTAATGTAAAGTGCATGGCTATGTTTAGAGGTTCACAAACTTCATCTTCTTTGCAATTTCTCTTCCTTGTCCTTCCCTGTCATGCTTCATTCATATATGGCCTCTAAGTTTGGAGGGACATTACTTGTACCAGTTCCTCGAAGAGTTTTTCCCTTTAGTGGAAGAGAAACATGAATTTCATACTTGTGGTTTTGGTGAGATAATAAAATGTACGGAGCATTCCTTTCTCGGACATTTTGAGCTACTATTACTTAGTACAGGTCATAGCCTTTTTCCCTGTACTTTATTTTTAAAATATCTTCCATGAAATGCTTGAATGATATAACTCTTCCATCATTCCATGATTTTAATTGGACCATAGGTTTCATGTACCAACTATGTCATGGCCATTTACAGGCACCCTCCTAGTTTGTACCCATTGGAAAGTGTAACCAAGGAGTCATCCATTGGAAGTGGAACAACTCTCTTTCTGTGCAATTTACTATCATTGCTTATTGTTTCAAGTAAGTTCGACATCCTTAACAGTATTTACTTGGACAGGTTCAGGGACGCTTGTTTCCAGAGAGGATATCTATTGCTTCGATTCAGAAAGGAGACGGGGACAGATCCACTTCTACATCCTGAAAGTTAGATTACTTGTATCTGTGGGGATTATCCTGATGACTAAAGTTATAGGCTGTGCCTTTTCTACCAGTCTTTTTCCTGTGACTAAAGTAGAAAATAGAGCTCAAAACCCTTTGTTGCGGTGCATATCATATATTCTGTGATAGTGATTTTGATCTATGAACTTATCCAATTATCATCTCCTAAACTAACTCCAATTGCAGGGTGCTGGAAACTGGGAAGAAACCATATTCTGGGCCTGGTGAATCAGCAGCTTCTCCAGCTCCGTGGTCATGA

mRNA sequence

ATGGTCGCATCTTCTTCGCATTTTGAGGTCCCCTTTGAACCGCTCAGCCGATGCCTTGAAATTGTGCAGGCAAGAGGGGACCATCACCACAATTTGTGTATTGTATCAGTGTCAGCACATTGGACCATATCTGCCAGTGCTGCTACGCACCCTCCTAGTTTGTACCCATTGGAAAGTGTAACCAAGGAGTCATCCATTGGAAGTGGAACAACTCTCTTTCTGTGCAATTTACTATCATTGCTTATTGTTTCAAGTAAGTTCGACATCCTTAACAGTATTTACTTGGACAGGGTGCTGGAAACTGGGAAGAAACCATATTCTGGGCCTGGTGAATCAGCAGCTTCTCCAGCTCCGTGGTCATGA

Coding sequence (CDS)

ATGGTCGCATCTTCTTCGCATTTTGAGGTCCCCTTTGAACCGCTCAGCCGATGCCTTGAAATTGTGCAGGCAAGAGGGGACCATCACCACAATTTGTGTATTGTATCAGTGTCAGCACATTGGACCATATCTGCCAGTGCTGCTACGCACCCTCCTAGTTTGTACCCATTGGAAAGTGTAACCAAGGAGTCATCCATTGGAAGTGGAACAACTCTCTTTCTGTGCAATTTACTATCATTGCTTATTGTTTCAAGTAAGTTCGACATCCTTAACAGTATTTACTTGGACAGGGTGCTGGAAACTGGGAAGAAACCATATTCTGGGCCTGGTGAATCAGCAGCTTCTCCAGCTCCGTGGTCATGA

Protein sequence

MVASSSHFEVPFEPLSRCLEIVQARGDHHHNLCIVSVSAHWTISASAATHPPSLYPLESVTKESSIGSGTTLFLCNLLSLLIVSSKFDILNSIYLDRVLETGKKPYSGPGESAASPAPWS

Homology

[Close]

BLAST of Moc11g04040 vs. ExPASy TrEMBL
Match: A0A6J1BZC4 (uncharacterized protein LOC111006869 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006869 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 7.0e-04
Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 0


Query: 97  RVLETGKKPYSGPGESAASPAPWS 121
           RVLETGKKPYSGPGESAASPAPWS
Sbjct: 99  RVLETGKKPYSGPGESAASPAPWS 122

[Close]

BLAST of Moc11g04040 vs. ExPASy TrEMBL
Match: A0A6J1C2M2 (uncharacterized protein LOC111006869 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006869 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 7.0e-04
Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 0


Query: 97  RVLETGKKPYSGPGESAASPAPWS 121
           RVLETGKKPYSGPGESAASPAPWS
Sbjct: 74  RVLETGKKPYSGPGESAASPAPWS 97

The following BLAST results are available for this feature:

BLAST of Moc11g04040 vs.


Match Name	E-value	Identity	Description

BLAST of Moc11g04040 vs.


Match Name	E-value	Identity	Description

BLAST of Moc11g04040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZC4	7.0e-04	100.00	uncharacterized protein LOC111006869 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1C2M2	7.0e-04	100.00	uncharacterized protein LOC111006869 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Moc11g04040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g04040.1	Moc11g04040.1	mRNA