Moc11g03460 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g03460
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	LOB domain-containing protein
Location	chr11: 2214029 .. 2214727 (-)
RNA-Seq Expression	Moc11g03460
Synteny	Moc11g03460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTGCAACGGATGCAGAGTTCTTCGAAAGGGTTGCAGCGAAGGCTGTGTTCTAAGATCGTGTCTCCACTGGATTGATTCGCCGGAATCCCAAGGCAACGCCACCTTATTTCTCGCTAAATTTTTCGGCCGAAGCGATCTCTTGTCCTTCATCTCCGCCGTCCCCGATCACCAAAGACCTGGTAACCATCTTTTTTCACCCTGTTTTTTTATTAATTTTATTCCGCAATGAACTCTCTGAGATTTCCTTTTTTTTTTTTTTTTTGAAGCTTTGTTCCAGTCTCTGTTATTCGAAGCTTGCGGCCGCACGGTGAATCCGGTGAGCGGCGCCGTGGGGCTGTTATCGAGCGGGAACTGGCACGTGTGTCAGGCGGCGGCGGAGACAGTGCTCGGTGGGGGAGTTCTCCGGCCGATACCCGGAATCGATGTTTCTGGAAATTCGACGGGACACGTGGATGAATCGTCTGTCAGTTTCAGTACAGATGTGTGGACCACACAGAATCTCCAATTTTACCCCTCCGTTCCGTCCGGTTATCGGCGGCTCTCCGATCTCGGCGGAGGAAAGAATCATTATCCTCAAATGGAGAATCGGAGATCGCTGGACTCGGAGGAGTCGGTGATGACCAGCTTCGGAAGCGGCGATCTCGGCGACGGCGACCGGCGGAAGGAGAGGAAGCTCTTAAACTTGTTCATCTGA

mRNA sequence

ATGAGTTGCAACGGATGCAGAGTTCTTCGAAAGGGTTGCAGCGAAGGCTGTGTTCTAAGATCGTGTCTCCACTGGATTGATTCGCCGGAATCCCAAGGCAACGCCACCTTATTTCTCGCTAAATTTTTCGGCCGAAGCGATCTCTTGTCCTTCATCTCCGCCGTCCCCGATCACCAAAGACCTGCTTTGTTCCAGTCTCTGTTATTCGAAGCTTGCGGCCGCACGGTGAATCCGGTGAGCGGCGCCGTGGGGCTGTTATCGAGCGGGAACTGGCACGTGTGTCAGGCGGCGGCGGAGACAGTGCTCGGTGGGGGAGTTCTCCGGCCGATACCCGGAATCGATGTTTCTGGAAATTCGACGGGACACGTGGATGAATCGTCTGTCAGTTTCAGTACAGATGTGTGGACCACACAGAATCTCCAATTTTACCCCTCCGTTCCGTCCGGTTATCGGCGGCTCTCCGATCTCGGCGGAGGAAAGAATCATTATCCTCAAATGGAGAATCGGAGATCGCTGGACTCGGAGGAGTCGGTGATGACCAGCTTCGGAAGCGGCGATCTCGGCGACGGCGACCGGCGGAAGGAGAGGAAGCTCTTAAACTTGTTCATCTGA

Coding sequence (CDS)

ATGAGTTGCAACGGATGCAGAGTTCTTCGAAAGGGTTGCAGCGAAGGCTGTGTTCTAAGATCGTGTCTCCACTGGATTGATTCGCCGGAATCCCAAGGCAACGCCACCTTATTTCTCGCTAAATTTTTCGGCCGAAGCGATCTCTTGTCCTTCATCTCCGCCGTCCCCGATCACCAAAGACCTGCTTTGTTCCAGTCTCTGTTATTCGAAGCTTGCGGCCGCACGGTGAATCCGGTGAGCGGCGCCGTGGGGCTGTTATCGAGCGGGAACTGGCACGTGTGTCAGGCGGCGGCGGAGACAGTGCTCGGTGGGGGAGTTCTCCGGCCGATACCCGGAATCGATGTTTCTGGAAATTCGACGGGACACGTGGATGAATCGTCTGTCAGTTTCAGTACAGATGTGTGGACCACACAGAATCTCCAATTTTACCCCTCCGTTCCGTCCGGTTATCGGCGGCTCTCCGATCTCGGCGGAGGAAAGAATCATTATCCTCAAATGGAGAATCGGAGATCGCTGGACTCGGAGGAGTCGGTGATGACCAGCTTCGGAAGCGGCGATCTCGGCGACGGCGACCGGCGGAAGGAGAGGAAGCTCTTAAACTTGTTCATCTGA

Protein sequence

MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQRPALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVLRPIPGIDVSGNSTGHVDESSVSFSTDVWTTQNLQFYPSVPSGYRRLSDLGGGKNHYPQMENRRSLDSEESVMTSFGSGDLGDGDRRKERKLLNLFI

Homology

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BLAST of Moc11g03460 vs. NCBI nr
Match: XP_022137491.1 (LOB domain-containing protein 39-like [Momordica charantia])

HSP 1 Score: 419.9 bits (1078), Expect = 1.3e-113
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQR 60
           MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQR
Sbjct: 1   MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVLRPIPGIDVSGNST 120
           PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVLRPIPGIDVSGNST
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVLRPIPGIDVSGNST 120

Query: 121 GHVDESSVSFSTDVWTTQNLQFYPSVPSGYRRLSDLGGGKNHYPQMENRRSLDSEESVMT 180
           GHVDESSVSFSTDVWTTQNLQFYPSVPSGYRRLSDLGGGKNHYPQMENRRSLDSEESVMT
Sbjct: 121 GHVDESSVSFSTDVWTTQNLQFYPSVPSGYRRLSDLGGGKNHYPQMENRRSLDSEESVMT 180

Query: 181 SFGSGDLGDGDRRKERKLLNLFI 204
           SFGSGDLGDGDRRKERKLLNLFI
Sbjct: 181 SFGSGDLGDGDRRKERKLLNLFI 203

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BLAST of Moc11g03460 vs. NCBI nr
Match: XP_004141401.1 (LOB domain-containing protein 39 [Cucumis sativus] >KGN55262.1 hypothetical protein Csa_012579 [Cucumis sativus])

HSP 1 Score: 334.7 bits (857), Expect = 5.5e-88
Identity = 168/208 (80.77%), Postives = 185/208 (88.94%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQR 60
           MSCNGCRVLRKGCSE CVLRS LHWIDSPE+QGNATLFLAKFFGRSDLLSFISAVP HQR
Sbjct: 1   MSCNGCRVLRKGCSEACVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVLRPIPGIDVSGNST 120
           PALFQSLLFEACGRTVNPVSGAVGLLS+GNWHVCQAAA+T+L GGVLRPIPGI++S N T
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSTGNWHVCQAAADTILNGGVLRPIPGIEISANPT 120

Query: 121 GHVDESSVSFSTDVWTT---QNLQFYPSVPSGYRRLSD--LGGGKNHYPQMENRRSLDSE 180
            ++D+SS++F+TDVWTT    NLQFYPS PS +R L D  LG  KNH+P +ENRRSLDSE
Sbjct: 121 PNLDDSSLTFNTDVWTTTTVHNLQFYPSTPSDFRCLPDLSLGRAKNHHP-LENRRSLDSE 180

Query: 181 ESVMTSFGSGDLGDGDRRKERKLLNLFI 204
           ESVMTSFGSGDL  GD+RKE KLLNLF+
Sbjct: 181 ESVMTSFGSGDL--GDQRKETKLLNLFV 205

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BLAST of Moc11g03460 vs. NCBI nr
Match: XP_038899091.1 (LOB domain-containing protein 39-like [Benincasa hispida])

HSP 1 Score: 331.6 bits (849), Expect = 4.6e-87
Identity = 169/207 (81.64%), Postives = 182/207 (87.92%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQR 60
           MSCNGCRVLRKGCSE CVLR  LHWIDSPE+QGNATLFLAKFFGRSDLLSFISAVP HQR
Sbjct: 1   MSCNGCRVLRKGCSETCVLRGSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVLRPIPGIDVSGNST 120
           PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAA+TVL GGVLRPIPG ++SGN T
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAADTVLNGGVLRPIPGFEISGNLT 120

Query: 121 GHVDESSVSFSTDVW--TTQNLQFYPSVPSGYRRLSD--LGGGKNHYPQMENRRSLDSEE 180
            ++DES ++F+TDVW  TT NLQFYPS PS +R L D  LG GKNH   +ENRRSLDSEE
Sbjct: 121 PNLDESLLTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLSLGRGKNH--PLENRRSLDSEE 180

Query: 181 SVMTSFGSGDLGDGDRRKERKLLNLFI 204
           SVMTSFGSGD+  GDRRKE KLLNLF+
Sbjct: 181 SVMTSFGSGDV--GDRRKETKLLNLFV 203

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BLAST of Moc11g03460 vs. NCBI nr
Match: XP_008452637.1 (PREDICTED: LOB domain-containing protein 39-like [Cucumis melo] >KAA0064436.1 LOB domain-containing protein 39-like [Cucumis melo var. makuwa])

HSP 1 Score: 330.5 bits (846), Expect = 1.0e-86
Identity = 164/205 (80.00%), Postives = 180/205 (87.80%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQR 60
           MSCNGCRVLRKGCSE CVLRS LHWIDSPE+QGNATLFLAKFFGRSDLLSFISAVP HQR
Sbjct: 1   MSCNGCRVLRKGCSEACVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVLRPIPGIDVSGNST 120
           PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAA+T+L GGVLRPIPGI++SGN T
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAADTILNGGVLRPIPGIEISGNPT 120

Query: 121 GHVDESSVSFSTDVW--TTQNLQFYPSVPSGYRRLSDLGGGKNHYPQMENRRSLDSEESV 180
            ++D+SS +F+ DVW  TT NLQFYPS PS +R L DLG  +     +ENRRSLDSEESV
Sbjct: 121 PNLDDSSFTFNNDVWTTTTHNLQFYPSTPSDFRCLPDLGLNRTKKHPLENRRSLDSEESV 180

Query: 181 MTSFGSGDLGDGDRRKERKLLNLFI 204
           MTSFGSGDL  G++RKE KLLNLF+
Sbjct: 181 MTSFGSGDL--GEQRKETKLLNLFV 203

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BLAST of Moc11g03460 vs. NCBI nr
Match: XP_022940004.1 (LOB domain-containing protein 39-like [Cucurbita moschata])

HSP 1 Score: 319.7 bits (818), Expect = 1.8e-83
Identity = 170/209 (81.34%), Postives = 175/209 (83.73%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQR 60
           MSCNGCRVLRKGCSE CVLRS LHWIDSPESQGNATLFLAKFFGRSDLLSFISAVP HQR
Sbjct: 1   MSCNGCRVLRKGCSEACVLRSSLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPHHQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVLRPIPGIDVSGNST 120
            ALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVL GGV R   GI+ SGN T
Sbjct: 61  SALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLRGGVPRANLGIEFSGNPT 120

Query: 121 GHVDESSVSFSTDVW--TTQNLQFYPSVPSGYRRLSDL----GGGKNHYPQMENRRSLDS 180
               ESS+S +TDVW  TTQN+QFYPS P   RRLSDL    G GK H   +ENRRSLDS
Sbjct: 121 AET-ESSLSLNTDVWTSTTQNIQFYPSSPFDSRRLSDLSLATGKGKTHL--LENRRSLDS 180

Query: 181 EESVMTSFGSGDLGDGDRRKERKLLNLFI 204
           EESVMTSFGS D  DGDRRKERKLLNLFI
Sbjct: 181 EESVMTSFGSADNSDGDRRKERKLLNLFI 206

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BLAST of Moc11g03460 vs. ExPASy Swiss-Prot
Match: Q9SZE8 (LOB domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=LBD39 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.3e-49
Identity = 122/240 (50.83%), Postives = 150/240 (62.50%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQR 60
           MSCNGCRVLRKGCSE C+LR CL WI+S ESQG+AT+F+AKFFGR+ L+SFIS+VP+ QR
Sbjct: 1   MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVLRPIPGIDVSGNST 120
           PALFQSLLFEACGRTVNPV+GAVG+L + NWHVCQAA ETVL GG LRPI  +  S +  
Sbjct: 61  PALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPISDLLESPSLM 120

Query: 121 GHVDESSVSFSTDVW--TTQNLQFYPSVPS--------GYRRL---SDLGGGKNHYPQME 180
              DESS  +  DV    T + +F  S  +          +RL   SDL    NH   + 
Sbjct: 121 ISCDESSEIWHQDVSRNQTHHCRFSTSRSTTEMKDSLVNRKRLKSDSDLDLQVNHGLTLT 180

Query: 181 --------------------NRRSLDSEESVMTS-FGSGDLGDGDRRK---ERKLLNLFI 204
                               +R    SEESV TS + +G  GD  +++   E+KLLNLF+
Sbjct: 181 APAVPVPFLPPSSFCKVVKGDRPGSPSEESVTTSCWENGMRGDNKQKRNKGEKKLLNLFV 240

[Close]

BLAST of Moc11g03460 vs. ExPASy Swiss-Prot
Match: Q9SN23 (LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.3e-47
Identity = 89/127 (70.08%), Postives = 106/127 (83.46%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQR 60
           MSCNGCRVLRKGCSE C+LR C+ WI+SPE+QG+AT+F+AKFFGR+ L+SFISAVP+ Q 
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVLRPIPGIDVSGNST 120
           PALFQSLL+EACGRTVNPV+GAVGLL +GNW+VCQAA ETVL GG L+PIP +   G   
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFA 120

Query: 121 GHVDESS 128
           G    +S
Sbjct: 121 GFPSPTS 127

[Close]

BLAST of Moc11g03460 vs. ExPASy Swiss-Prot
Match: Q9FN11 (LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 4.9e-47
Identity = 88/142 (61.97%), Postives = 112/142 (78.87%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQR 60
           MSCNGCRVLRKGCSE C+LR C+ WI++ ++QG+AT+F+AKFFGR+ L+SFISAVPD QR
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVLRPIPGIDVSGNST 120
           PALFQSLL+EACGRTVNPV+GA+G+L +GNW++CQAA ETVL GG LRPIP +   G   
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPIPELLTHGGGF 120

Query: 121 GHVDESSVSFSTDVWTTQ-NLQ 142
                 +   ++++ T   NLQ
Sbjct: 121 AGFPSPTSEEASEICTEMLNLQ 142

[Close]

BLAST of Moc11g03460 vs. ExPASy Swiss-Prot
Match: Q9ZW96 (LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.4e-40
Identity = 73/110 (66.36%), Postives = 89/110 (80.91%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQR 60
           MSCNGCRVLRKGCSE C +R CL WI S ESQ NAT+FLAKF+GR+ L++ ++  PDH R
Sbjct: 3   MSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDHLR 62

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVLRPI 111
           PA+F+SLL+EACGR VNP+ G+VGLL SGNWH+CQAA E V+ G  + PI
Sbjct: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPI 112

[Close]

BLAST of Moc11g03460 vs. ExPASy Swiss-Prot
Match: Q9CA30 (LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.5e-37
Identity = 72/118 (61.02%), Postives = 89/118 (75.42%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQR 60
           +SCNGCRVLRKGC++ C +R CL WI S +SQ NATLFLAKF+GR+ LL+ I + PDH R
Sbjct: 3   ISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDHLR 62

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVL--RPIPGIDVS 117
           PA+F+SLL+EACGR VNPV G+VGL+ SGNW  CQAA + VL G  +   P+P    S
Sbjct: 63  PAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS 120

[Close]

BLAST of Moc11g03460 vs. ExPASy TrEMBL
Match: A0A6J1C6S3 (LOB domain-containing protein 39-like OS=Momordica charantia OX=3673 GN=LOC111008919 PE=3 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 6.2e-114
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQR 60
           MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQR
Sbjct: 1   MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVLRPIPGIDVSGNST 120
           PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVLRPIPGIDVSGNST
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVLRPIPGIDVSGNST 120

Query: 121 GHVDESSVSFSTDVWTTQNLQFYPSVPSGYRRLSDLGGGKNHYPQMENRRSLDSEESVMT 180
           GHVDESSVSFSTDVWTTQNLQFYPSVPSGYRRLSDLGGGKNHYPQMENRRSLDSEESVMT
Sbjct: 121 GHVDESSVSFSTDVWTTQNLQFYPSVPSGYRRLSDLGGGKNHYPQMENRRSLDSEESVMT 180

Query: 181 SFGSGDLGDGDRRKERKLLNLFI 204
           SFGSGDLGDGDRRKERKLLNLFI
Sbjct: 181 SFGSGDLGDGDRRKERKLLNLFI 203

[Close]

BLAST of Moc11g03460 vs. ExPASy TrEMBL
Match: A0A0A0L3S5 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G642430 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.6e-88
Identity = 168/208 (80.77%), Postives = 185/208 (88.94%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQR 60
           MSCNGCRVLRKGCSE CVLRS LHWIDSPE+QGNATLFLAKFFGRSDLLSFISAVP HQR
Sbjct: 1   MSCNGCRVLRKGCSEACVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVLRPIPGIDVSGNST 120
           PALFQSLLFEACGRTVNPVSGAVGLLS+GNWHVCQAAA+T+L GGVLRPIPGI++S N T
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSTGNWHVCQAAADTILNGGVLRPIPGIEISANPT 120

Query: 121 GHVDESSVSFSTDVWTT---QNLQFYPSVPSGYRRLSD--LGGGKNHYPQMENRRSLDSE 180
            ++D+SS++F+TDVWTT    NLQFYPS PS +R L D  LG  KNH+P +ENRRSLDSE
Sbjct: 121 PNLDDSSLTFNTDVWTTTTVHNLQFYPSTPSDFRCLPDLSLGRAKNHHP-LENRRSLDSE 180

Query: 181 ESVMTSFGSGDLGDGDRRKERKLLNLFI 204
           ESVMTSFGSGDL  GD+RKE KLLNLF+
Sbjct: 181 ESVMTSFGSGDL--GDQRKETKLLNLFV 205

[Close]

BLAST of Moc11g03460 vs. ExPASy TrEMBL
Match: A0A5A7VDI5 (LOB domain-containing protein 39-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G001480 PE=3 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 5.0e-87
Identity = 164/205 (80.00%), Postives = 180/205 (87.80%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQR 60
           MSCNGCRVLRKGCSE CVLRS LHWIDSPE+QGNATLFLAKFFGRSDLLSFISAVP HQR
Sbjct: 1   MSCNGCRVLRKGCSEACVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVLRPIPGIDVSGNST 120
           PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAA+T+L GGVLRPIPGI++SGN T
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAADTILNGGVLRPIPGIEISGNPT 120

Query: 121 GHVDESSVSFSTDVW--TTQNLQFYPSVPSGYRRLSDLGGGKNHYPQMENRRSLDSEESV 180
            ++D+SS +F+ DVW  TT NLQFYPS PS +R L DLG  +     +ENRRSLDSEESV
Sbjct: 121 PNLDDSSFTFNNDVWTTTTHNLQFYPSTPSDFRCLPDLGLNRTKKHPLENRRSLDSEESV 180

Query: 181 MTSFGSGDLGDGDRRKERKLLNLFI 204
           MTSFGSGDL  G++RKE KLLNLF+
Sbjct: 181 MTSFGSGDL--GEQRKETKLLNLFV 203

[Close]

BLAST of Moc11g03460 vs. ExPASy TrEMBL
Match: A0A1S3BVG9 (LOB domain-containing protein 39-like OS=Cucumis melo OX=3656 GN=LOC103493596 PE=3 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 5.0e-87
Identity = 164/205 (80.00%), Postives = 180/205 (87.80%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQR 60
           MSCNGCRVLRKGCSE CVLRS LHWIDSPE+QGNATLFLAKFFGRSDLLSFISAVP HQR
Sbjct: 1   MSCNGCRVLRKGCSEACVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVLRPIPGIDVSGNST 120
           PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAA+T+L GGVLRPIPGI++SGN T
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAADTILNGGVLRPIPGIEISGNPT 120

Query: 121 GHVDESSVSFSTDVW--TTQNLQFYPSVPSGYRRLSDLGGGKNHYPQMENRRSLDSEESV 180
            ++D+SS +F+ DVW  TT NLQFYPS PS +R L DLG  +     +ENRRSLDSEESV
Sbjct: 121 PNLDDSSFTFNNDVWTTTTHNLQFYPSTPSDFRCLPDLGLNRTKKHPLENRRSLDSEESV 180

Query: 181 MTSFGSGDLGDGDRRKERKLLNLFI 204
           MTSFGSGDL  G++RKE KLLNLF+
Sbjct: 181 MTSFGSGDL--GEQRKETKLLNLFV 203

[Close]

BLAST of Moc11g03460 vs. ExPASy TrEMBL
Match: A0A6J1FIT3 (LOB domain-containing protein 39-like OS=Cucurbita moschata OX=3662 GN=LOC111445767 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 8.8e-84
Identity = 170/209 (81.34%), Postives = 175/209 (83.73%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQR 60
           MSCNGCRVLRKGCSE CVLRS LHWIDSPESQGNATLFLAKFFGRSDLLSFISAVP HQR
Sbjct: 1   MSCNGCRVLRKGCSEACVLRSSLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPHHQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVLRPIPGIDVSGNST 120
            ALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVL GGV R   GI+ SGN T
Sbjct: 61  SALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLRGGVPRANLGIEFSGNPT 120

Query: 121 GHVDESSVSFSTDVW--TTQNLQFYPSVPSGYRRLSDL----GGGKNHYPQMENRRSLDS 180
               ESS+S +TDVW  TTQN+QFYPS P   RRLSDL    G GK H   +ENRRSLDS
Sbjct: 121 AET-ESSLSLNTDVWTSTTQNIQFYPSSPFDSRRLSDLSLATGKGKTHL--LENRRSLDS 180

Query: 181 EESVMTSFGSGDLGDGDRRKERKLLNLFI 204
           EESVMTSFGS D  DGDRRKERKLLNLFI
Sbjct: 181 EESVMTSFGSADNSDGDRRKERKLLNLFI 206

[Close]

BLAST of Moc11g03460 vs. TAIR 10
Match: AT4G37540.1 (LOB domain-containing protein 39 )

HSP 1 Score: 196.8 bits (499), Expect = 1.7e-50
Identity = 122/240 (50.83%), Postives = 150/240 (62.50%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQR 60
           MSCNGCRVLRKGCSE C+LR CL WI+S ESQG+AT+F+AKFFGR+ L+SFIS+VP+ QR
Sbjct: 1   MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVLRPIPGIDVSGNST 120
           PALFQSLLFEACGRTVNPV+GAVG+L + NWHVCQAA ETVL GG LRPI  +  S +  
Sbjct: 61  PALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPISDLLESPSLM 120

Query: 121 GHVDESSVSFSTDVW--TTQNLQFYPSVPS--------GYRRL---SDLGGGKNHYPQME 180
              DESS  +  DV    T + +F  S  +          +RL   SDL    NH   + 
Sbjct: 121 ISCDESSEIWHQDVSRNQTHHCRFSTSRSTTEMKDSLVNRKRLKSDSDLDLQVNHGLTLT 180

Query: 181 --------------------NRRSLDSEESVMTS-FGSGDLGDGDRRK---ERKLLNLFI 204
                               +R    SEESV TS + +G  GD  +++   E+KLLNLF+
Sbjct: 181 APAVPVPFLPPSSFCKVVKGDRPGSPSEESVTTSCWENGMRGDNKQKRNKGEKKLLNLFV 240

[Close]

BLAST of Moc11g03460 vs. TAIR 10
Match: AT3G49940.1 (LOB domain-containing protein 38 )

HSP 1 Score: 191.0 bits (484), Expect = 9.1e-49
Identity = 89/127 (70.08%), Postives = 106/127 (83.46%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQR 60
           MSCNGCRVLRKGCSE C+LR C+ WI+SPE+QG+AT+F+AKFFGR+ L+SFISAVP+ Q 
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVLRPIPGIDVSGNST 120
           PALFQSLL+EACGRTVNPV+GAVGLL +GNW+VCQAA ETVL GG L+PIP +   G   
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFA 120

Query: 121 GHVDESS 128
           G    +S
Sbjct: 121 GFPSPTS 127

[Close]

BLAST of Moc11g03460 vs. TAIR 10
Match: AT5G67420.1 (LOB domain-containing protein 37 )

HSP 1 Score: 189.1 bits (479), Expect = 3.5e-48
Identity = 88/142 (61.97%), Postives = 112/142 (78.87%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQR 60
           MSCNGCRVLRKGCSE C+LR C+ WI++ ++QG+AT+F+AKFFGR+ L+SFISAVPD QR
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVLRPIPGIDVSGNST 120
           PALFQSLL+EACGRTVNPV+GA+G+L +GNW++CQAA ETVL GG LRPIP +   G   
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPIPELLTHGGGF 120

Query: 121 GHVDESSVSFSTDVWTTQ-NLQ 142
                 +   ++++ T   NLQ
Sbjct: 121 AGFPSPTSEEASEICTEMLNLQ 142

[Close]

BLAST of Moc11g03460 vs. TAIR 10
Match: AT1G67100.1 (LOB domain-containing protein 40 )

HSP 1 Score: 166.0 bits (419), Expect = 3.1e-41
Identity = 73/110 (66.36%), Postives = 89/110 (80.91%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQR 60
           MSCNGCRVLRKGCSE C +R CL WI S ESQ NAT+FLAKF+GR+ L++ ++  PDH R
Sbjct: 3   MSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDHLR 62

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVLRPI 111
           PA+F+SLL+EACGR VNP+ G+VGLL SGNWH+CQAA E V+ G  + PI
Sbjct: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPI 112

[Close]

BLAST of Moc11g03460 vs. TAIR 10
Match: AT1G68510.1 (LOB domain-containing protein 42 )

HSP 1 Score: 156.4 bits (394), Expect = 2.5e-38
Identity = 72/118 (61.02%), Postives = 89/118 (75.42%), Query Frame = 0


Query: 1   MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQR 60
           +SCNGCRVLRKGC++ C +R CL WI S +SQ NATLFLAKF+GR+ LL+ I + PDH R
Sbjct: 3   ISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDHLR 62

Query: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVL--RPIPGIDVS 117
           PA+F+SLL+EACGR VNPV G+VGL+ SGNW  CQAA + VL G  +   P+P    S
Sbjct: 63  PAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS 120

The following BLAST results are available for this feature:

BLAST of Moc11g03460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137491.1	1.3e-113	100.00	LOB domain-containing protein 39-like [Momordica charantia]	[more]
XP_004141401.1	5.5e-88	80.77	LOB domain-containing protein 39 [Cucumis sativus] >KGN55262.1 hypothetical prot...	[more]
XP_038899091.1	4.6e-87	81.64	LOB domain-containing protein 39-like [Benincasa hispida]	[more]
XP_008452637.1	1.0e-86	80.00	PREDICTED: LOB domain-containing protein 39-like [Cucumis melo] >KAA0064436.1 LO...	[more]
XP_022940004.1	1.8e-83	81.34	LOB domain-containing protein 39-like [Cucurbita moschata]	[more]

BLAST of Moc11g03460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZE8	2.3e-49	50.83	LOB domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=LBD39 PE=2 S...	[more]
Q9SN23	1.3e-47	70.08	LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 S...	[more]
Q9FN11	4.9e-47	61.97	LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 S...	[more]
Q9ZW96	4.4e-40	66.36	LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 S...	[more]
Q9CA30	3.5e-37	61.02	LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 S...	[more]

BLAST of Moc11g03460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C6S3	6.2e-114	100.00	LOB domain-containing protein 39-like OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A0A0L3S5	2.6e-88	80.77	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G642430 PE=3 SV...	[more]
A0A5A7VDI5	5.0e-87	80.00	LOB domain-containing protein 39-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3BVG9	5.0e-87	80.00	LOB domain-containing protein 39-like OS=Cucumis melo OX=3656 GN=LOC103493596 PE...	[more]
A0A6J1FIT3	8.8e-84	81.34	LOB domain-containing protein 39-like OS=Cucurbita moschata OX=3662 GN=LOC111445...	[more]

BLAST of Moc11g03460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37540.1	1.7e-50	50.83	LOB domain-containing protein 39	[more]
AT3G49940.1	9.1e-49	70.08	LOB domain-containing protein 38	[more]
AT5G67420.1	3.5e-48	61.97	LOB domain-containing protein 37	[more]
AT1G67100.1	3.1e-41	66.36	LOB domain-containing protein 40	[more]
AT1G68510.1	2.5e-38	61.02	LOB domain-containing protein 42	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 2..100 e-value: 5.5E-25 score: 87.8
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 1..107 score: 18.097542
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..190
None	No IPR available	PANTHER	PTHR31304	LOB DOMAIN-CONTAINING PROTEIN 38	coord: 1..203
None	No IPR available	PANTHER	PTHR31304:SF38	LOB DOMAIN-CONTAINING PROTEIN 39-LIKE	coord: 1..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g03460.1	Moc11g03460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression