Moc11g01260 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g01260
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr11: 806284 .. 806592 (-)
RNA-Seq Expression	Moc11g01260
Synteny	Moc11g01260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAGGCCTAAAACCGAAGCCCTTGCCGCTGCTTCTCATTCCAAATCTCTCAACTTCTCCTCCATGAAGCTCTTCCATCGAATCCGTAAGATACTGATGCGGCTGGTGTTCTCTTTTCCATCACGAGTGTCGCCGAGACGAAAAACGAGCTACGACAAGTCGTTTGAGCCACCGAAAACGTCATGTAGCTCGTATTACTCTTCCCACTCCCATTACGACGAAGCCATTGCCGATTGCATCGAGTTCTTCAACAAGTCGTCACAAGATGAGGTTTTGGAGGCTCAAAACCTCCATGTTTTAGTATGA

mRNA sequence

ATGCAAAGGCCTAAAACCGAAGCCCTTGCCGCTGCTTCTCATTCCAAATCTCTCAACTTCTCCTCCATGAAGCTCTTCCATCGAATCCGTAAGATACTGATGCGGCTGGTGTTCTCTTTTCCATCACGAGTGTCGCCGAGACGAAAAACGAGCTACGACAAGTCGTTTGAGCCACCGAAAACGTCATGTAGCTCGTATTACTCTTCCCACTCCCATTACGACGAAGCCATTGCCGATTGCATCGAGTTCTTCAACAAGTCGTCACAAGATGAGGTTTTGGAGGCTCAAAACCTCCATGTTTTAGTATGA

Coding sequence (CDS)

ATGCAAAGGCCTAAAACCGAAGCCCTTGCCGCTGCTTCTCATTCCAAATCTCTCAACTTCTCCTCCATGAAGCTCTTCCATCGAATCCGTAAGATACTGATGCGGCTGGTGTTCTCTTTTCCATCACGAGTGTCGCCGAGACGAAAAACGAGCTACGACAAGTCGTTTGAGCCACCGAAAACGTCATGTAGCTCGTATTACTCTTCCCACTCCCATTACGACGAAGCCATTGCCGATTGCATCGAGTTCTTCAACAAGTCGTCACAAGATGAGGTTTTGGAGGCTCAAAACCTCCATGTTTTAGTATGA

Protein sequence

MQRPKTEALAAASHSKSLNFSSMKLFHRIRKILMRLVFSFPSRVSPRRKTSYDKSFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDEVLEAQNLHVLV

Homology

[Close]

BLAST of Moc11g01260 vs. NCBI nr
Match: KGN60030.1 (hypothetical protein Csa_001336 [Cucumis sativus])

HSP 1 Score: 139.4 bits (350), Expect = 1.7e-29
Identity = 77/104 (74.04%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 1   MQRPKTEAL------AAASHSKSLNFSSMKLFHRIRKILMRLVFSFPSRV--SPRRKTSY 60
           MQRPKT A       +++S S SLNFSSMKLF RIRK+L+R VFS PSRV  S RR+TSY
Sbjct: 1   MQRPKTSAALITAVSSSSSSSNSLNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSRRRTSY 60

Query: 61  DKSFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDEVLEAQ 97
           DKSF+PPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD   E Q
Sbjct: 61  DKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDRGFEDQ 104

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BLAST of Moc11g01260 vs. NCBI nr
Match: KAG7024157.1 (hypothetical protein SDJN02_12970, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 120.2 bits (300), Expect = 1.1e-23
Identity = 58/68 (85.29%), Postives = 64/68 (94.12%), Query Frame = 0


Query: 23 MKLFHRIRKILMRLVFSFPSRVSPRRKTSYDKSFEPPKTSCSSYYSSHSHYDEAIADCIE 82
          MKLFHRIRKIL+R VFS PSRVS R++T+YDK ++PPKTSCSSYYSSHSHYDEAIADCIE
Sbjct: 1  MKLFHRIRKILVRFVFSLPSRVSSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIE 60

Query: 83 FFNKSSQD 91
          FFNKSSQD
Sbjct: 61 FFNKSSQD 68

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BLAST of Moc11g01260 vs. NCBI nr
Match: RDX72233.1 (hypothetical protein CR513_48306, partial [Mucuna pruriens])

HSP 1 Score: 109.8 bits (273), Expect = 1.4e-20
Identity = 58/84 (69.05%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 18  LNFSSMKLFHRIRKILMRLVFSFPSRVSPRRKTSYDKSFEPPKTSCSSYYSSHSHYDEAI 77
           LN S+MKLF R RKILMRLVFS PSR S   +      FEPPKTSCSSYYSS+SHY+EAI
Sbjct: 35  LNLSAMKLFQRFRKILMRLVFSVPSRRSSDSRHKVSDRFEPPKTSCSSYYSSYSHYNEAI 94

Query: 78  ADCIEFFNKSSQDEVLEAQNLHVL 102
           ADCIEFFNKS+QD VL+A+   V+
Sbjct: 95  ADCIEFFNKSAQDGVLDARKSDVV 118

[Close]

BLAST of Moc11g01260 vs. NCBI nr
Match: XP_007017791.2 (PREDICTED: uncharacterized protein LOC18591544 [Theobroma cacao])

HSP 1 Score: 109.4 bits (272), Expect = 1.9e-20
Identity = 62/108 (57.41%), Postives = 78/108 (72.22%), Query Frame = 0


Query: 1   MQRPKTEALAAASHSKSLNFSSMKLFHRIRKILMRLVFSFPSRVS------PRRKTSYDK 60
           + R  T    A++ S  LNFS+MKLF+R RKILMRL+FS PS  S        ++T+ D+
Sbjct: 19  LDRHHTPQAQASTLSPKLNFSAMKLFNRFRKILMRLIFSLPSGGSSGTSSMAPKQTNCDR 78

Query: 61  SFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDEVLEAQNLHVLV 103
            F+PPKTSCSSYYSSHSHY EAIADCIEFFNKSSQ+ +++ +   VLV
Sbjct: 79  -FDPPKTSCSSYYSSHSHYTEAIADCIEFFNKSSQEGIMDGRKSDVLV 125

[Close]

BLAST of Moc11g01260 vs. NCBI nr
Match: EOY15016.1 (Uncharacterized protein TCM_034216 [Theobroma cacao])

HSP 1 Score: 109.4 bits (272), Expect = 1.9e-20
Identity = 62/108 (57.41%), Postives = 78/108 (72.22%), Query Frame = 0


Query: 1   MQRPKTEALAAASHSKSLNFSSMKLFHRIRKILMRLVFSFPSRVS------PRRKTSYDK 60
           + R  T    A++ S  LNFS+MKLF+R RKILMRL+FS PS  S        ++T+ D+
Sbjct: 46  LDRHHTPQAQASTLSPKLNFSAMKLFNRFRKILMRLIFSLPSGGSSGTSSMAPKQTNCDR 105

Query: 61  SFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDEVLEAQNLHVLV 103
            F+PPKTSCSSYYSSHSHY EAIADCIEFFNKSSQ+ +++ +   VLV
Sbjct: 106 -FDPPKTSCSSYYSSHSHYTEAIADCIEFFNKSSQEGIMDGRKSDVLV 152

[Close]

BLAST of Moc11g01260 vs. ExPASy TrEMBL
Match: A0A0A0LDK4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872120 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 8.2e-30
Identity = 77/104 (74.04%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 1   MQRPKTEAL------AAASHSKSLNFSSMKLFHRIRKILMRLVFSFPSRV--SPRRKTSY 60
           MQRPKT A       +++S S SLNFSSMKLF RIRK+L+R VFS PSRV  S RR+TSY
Sbjct: 1   MQRPKTSAALITAVSSSSSSSNSLNFSSMKLFQRIRKMLVRFVFSIPSRVSSSSRRRTSY 60

Query: 61  DKSFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDEVLEAQ 97
           DKSF+PPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD   E Q
Sbjct: 61  DKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDRGFEDQ 104

[Close]

BLAST of Moc11g01260 vs. ExPASy TrEMBL
Match: A0A371F207 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_48306 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 6.9e-21
Identity = 58/84 (69.05%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 18  LNFSSMKLFHRIRKILMRLVFSFPSRVSPRRKTSYDKSFEPPKTSCSSYYSSHSHYDEAI 77
           LN S+MKLF R RKILMRLVFS PSR S   +      FEPPKTSCSSYYSS+SHY+EAI
Sbjct: 35  LNLSAMKLFQRFRKILMRLVFSVPSRRSSDSRHKVSDRFEPPKTSCSSYYSSYSHYNEAI 94

Query: 78  ADCIEFFNKSSQDEVLEAQNLHVL 102
           ADCIEFFNKS+QD VL+A+   V+
Sbjct: 95  ADCIEFFNKSAQDGVLDARKSDVV 118

[Close]

BLAST of Moc11g01260 vs. ExPASy TrEMBL
Match: A0A6J1ADC8 (uncharacterized protein LOC110417084 OS=Herrania umbratica OX=108875 GN=LOC110417084 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 9.1e-21
Identity = 62/108 (57.41%), Postives = 78/108 (72.22%), Query Frame = 0


Query: 1   MQRPKTEALAAASHSKSLNFSSMKLFHRIRKILMRLVFSFPSRVS------PRRKTSYDK 60
           + R  T    A++ S  LNFS+MKLF+R RKILMRL+FS PS  S        ++T+ D+
Sbjct: 19  LHRHHTPHAQASTLSPKLNFSAMKLFNRFRKILMRLIFSLPSGGSSGTSSMAAKQTNCDR 78

Query: 61  SFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDEVLEAQNLHVLV 103
            F+PPKTSCSSYYSSHSHY EAIADCIEFFNKSSQ+ +++ +   VLV
Sbjct: 79  -FDPPKTSCSSYYSSHSHYTEAIADCIEFFNKSSQEGIMDGRKSDVLV 125

[Close]

BLAST of Moc11g01260 vs. ExPASy TrEMBL
Match: A0A061FD82 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_034216 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 9.1e-21
Identity = 62/108 (57.41%), Postives = 78/108 (72.22%), Query Frame = 0


Query: 1   MQRPKTEALAAASHSKSLNFSSMKLFHRIRKILMRLVFSFPSRVS------PRRKTSYDK 60
           + R  T    A++ S  LNFS+MKLF+R RKILMRL+FS PS  S        ++T+ D+
Sbjct: 46  LDRHHTPQAQASTLSPKLNFSAMKLFNRFRKILMRLIFSLPSGGSSGTSSMAPKQTNCDR 105

Query: 61  SFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDEVLEAQNLHVLV 103
            F+PPKTSCSSYYSSHSHY EAIADCIEFFNKSSQ+ +++ +   VLV
Sbjct: 106 -FDPPKTSCSSYYSSHSHYTEAIADCIEFFNKSSQEGIMDGRKSDVLV 152

[Close]

BLAST of Moc11g01260 vs. ExPASy TrEMBL
Match: A0A7N2QYF0 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 9.1e-21
Identity = 64/101 (63.37%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 10  AAASHSKSLNFSSMKLFHRIRKILMRLVFSFPSRVSPRRKTSYDKS-------FEPPKTS 69
           A+++ S  LNFS+MKLF+R RKILMRL+FS PSR S    T    S       FEPPKTS
Sbjct: 65  ASSTVSPKLNFSAMKLFNRFRKILMRLLFSLPSRGSSASSTGMANSGPKNCDKFEPPKTS 124

Query: 70  CSSYYSSHSHYDEAIADCIEFFNK-SSQDEVLEAQNLHVLV 103
           CSSYYSSHSHY+EAIADCIEFFNK SSQ+ VL+  N  V+V
Sbjct: 125 CSSYYSSHSHYNEAIADCIEFFNKSSSQEGVLDGCNSDVMV 165

[Close]

BLAST of Moc11g01260 vs. TAIR 10
Match: AT1G75717.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 75.9 bits (185), Expect = 2.1e-14
Identity = 45/72 (62.50%), Postives = 51/72 (70.83%), Query Frame = 0


Query: 23 MKLFHRIRKILMRLVFSFPSRVSPRRKTSYDKS-----FEPPKTSC-SSYYSSHSHYDEA 82
          MKLFH++ KILMRL+       S R+K +  +S     FEPPK SC SSYYSSH HY EA
Sbjct: 1  MKLFHKLGKILMRLIDFTLHSSSRRQKKNNSRSGDGERFEPPKISCSSSYYSSHVHYSEA 60

Query: 83 IADCIEFFNKSS 89
          IADCIEFFNKSS
Sbjct: 61 IADCIEFFNKSS 72

The following BLAST results are available for this feature:

BLAST of Moc11g01260 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN60030.1	1.7e-29	74.04	hypothetical protein Csa_001336 [Cucumis sativus]	[more]
KAG7024157.1	1.1e-23	85.29	hypothetical protein SDJN02_12970, partial [Cucurbita argyrosperma subsp. argyro...	[more]
RDX72233.1	1.4e-20	69.05	hypothetical protein CR513_48306, partial [Mucuna pruriens]	[more]
XP_007017791.2	1.9e-20	57.41	PREDICTED: uncharacterized protein LOC18591544 [Theobroma cacao]	[more]
EOY15016.1	1.9e-20	57.41	Uncharacterized protein TCM_034216 [Theobroma cacao]	[more]

BLAST of Moc11g01260 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g01260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDK4	8.2e-30	74.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872120 PE=4 SV=1	[more]
A0A371F207	6.9e-21	69.05	Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_48306 P...	[more]
A0A6J1ADC8	9.1e-21	57.41	uncharacterized protein LOC110417084 OS=Herrania umbratica OX=108875 GN=LOC11041...	[more]
A0A061FD82	9.1e-21	57.41	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_034216 PE=4 SV=1	[more]
A0A7N2QYF0	9.1e-21	63.37	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of Moc11g01260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75717.1	2.1e-14	62.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35111:SF5	F10A5.9	coord: 10..98
None	No IPR available	PANTHER	PTHR35111	F10A5.9-RELATED	coord: 10..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g01260.1	Moc11g01260.1	mRNA