Moc11g01200 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g01200
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Transmembrane protein
Location	chr11: 785558 .. 785935 (+)
RNA-Seq Expression	Moc11g01200
Synteny	Moc11g01200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTGGATGGTGGGGGAAAGAGGTCCAGAGTGGAAGTATGGATGGGCAGAGAGAACGATGACCTCCATGTCTCTCCCGCCGATGCCGCTGCTCGCCTTTTTCGGTGTCGTCGTCCTTCTGCTGTCGTTGCAGACGAAAACCGTGTTCGACTTCAAGTTGTTCCTTTTTGCTTTGATATTATTGCTGATCTTTGTTGTAAATTCCATGGCCGTGTATGGTACGGTTGTTGGGCCTGCTTCAGTGAGAACTACGACCAGGTCGGTTCGGGAGGCCGAAAAGACCTCGCCTTGGGGCGTGGCGGTGTTGCTGTTTCTGCTGCTGATATTGCTATGGAACCGCCCTTACTTCCGCTCCAAGTGGTCGCCCCCATCTTAA

mRNA sequence

ATGAGTTGGATGGTGGGGGAAAGAGGTCCAGAGTGGAAGTATGGATGGGCAGAGAGAACGATGACCTCCATGTCTCTCCCGCCGATGCCGCTGCTCGCCTTTTTCGGTGTCGTCGTCCTTCTGCTGTCGTTGCAGACGAAAACCGTGTTCGACTTCAAGTTGTTCCTTTTTGCTTTGATATTATTGCTGATCTTTGTTGTAAATTCCATGGCCGTGTATGGTACGGTTGTTGGGCCTGCTTCAGTGAGAACTACGACCAGGTCGGTTCGGGAGGCCGAAAAGACCTCGCCTTGGGGCGTGGCGGTGTTGCTGTTTCTGCTGCTGATATTGCTATGGAACCGCCCTTACTTCCGCTCCAAGTGGTCGCCCCCATCTTAA

Coding sequence (CDS)

ATGAGTTGGATGGTGGGGGAAAGAGGTCCAGAGTGGAAGTATGGATGGGCAGAGAGAACGATGACCTCCATGTCTCTCCCGCCGATGCCGCTGCTCGCCTTTTTCGGTGTCGTCGTCCTTCTGCTGTCGTTGCAGACGAAAACCGTGTTCGACTTCAAGTTGTTCCTTTTTGCTTTGATATTATTGCTGATCTTTGTTGTAAATTCCATGGCCGTGTATGGTACGGTTGTTGGGCCTGCTTCAGTGAGAACTACGACCAGGTCGGTTCGGGAGGCCGAAAAGACCTCGCCTTGGGGCGTGGCGGTGTTGCTGTTTCTGCTGCTGATATTGCTATGGAACCGCCCTTACTTCCGCTCCAAGTGGTCGCCCCCATCTTAA

Protein sequence

MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQTKTVFDFKLFLFALILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWGVAVLLFLLLILLWNRPYFRSKWSPPS

Homology

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BLAST of Moc11g01200 vs. NCBI nr
Match: KGN60038.1 (hypothetical protein Csa_001668 [Cucumis sativus])

HSP 1 Score: 185.7 bits (470), Expect = 2.5e-43
Identity = 98/126 (77.78%), Postives = 108/126 (85.71%), Query Frame = 0


Query: 1   MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQT-KTVFDFKLFLFAL 60
           MSW+V ERGPEWKYGW ER M+SMSLPPMPLLAF GVVVLLLSLQ+ + V DFKL L AL
Sbjct: 1   MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60

Query: 61  ILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWGVAVLLFLLLILLWNRPYFRS 120
             L+IFV NS+AV GT VG AS+RT +RS +EAE+TSPWG AVLLFLLLILLWNRPYFRS
Sbjct: 61  PFLMIFVANSVAVSGT-VGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRS 120

Query: 121 KWSPPS 126
           KWSPPS
Sbjct: 121 KWSPPS 125

[Close]

BLAST of Moc11g01200 vs. NCBI nr
Match: KAA0063287.1 (hypothetical protein E6C27_scaffold205G001100 [Cucumis melo var. makuwa])

HSP 1 Score: 182.2 bits (461), Expect = 2.8e-42
Identity = 96/126 (76.19%), Postives = 106/126 (84.13%), Query Frame = 0


Query: 1   MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQT-KTVFDFKLFLFAL 60
           MSW+V ERGPEWKYGW ER M SMSLPPMPLLAF GVVVLLLSLQ+ + V DFKL L AL
Sbjct: 1   MSWVVEERGPEWKYGWTERKMASMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60

Query: 61  ILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWGVAVLLFLLLILLWNRPYFRS 120
             L+IF  NS+AV GT VG A++RT +RS +EAE+TSPWG AVLLFLLLILLWNRPYFRS
Sbjct: 61  PFLIIFFANSVAVSGT-VGSAAMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRS 120

Query: 121 KWSPPS 126
           KWSPPS
Sbjct: 121 KWSPPS 125

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BLAST of Moc11g01200 vs. NCBI nr
Match: TYK31488.1 (hypothetical protein E5676_scaffold455G008040 [Cucumis melo var. makuwa])

HSP 1 Score: 180.6 bits (457), Expect = 8.1e-42
Identity = 95/126 (75.40%), Postives = 105/126 (83.33%), Query Frame = 0


Query: 1   MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQT-KTVFDFKLFLFAL 60
           MSW+V ERGPEWKYGW ER M SMSLPPMPLLAF GVVVLLLSLQ+ + V DFKL L AL
Sbjct: 1   MSWVVEERGPEWKYGWTERKMASMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60

Query: 61  ILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWGVAVLLFLLLILLWNRPYFRS 120
              +IF  NS+AV GT VG A++RT +RS +EAE+TSPWG AVLLFLLLILLWNRPYFRS
Sbjct: 61  PFFIIFFANSVAVSGT-VGSAAMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRS 120

Query: 121 KWSPPS 126
           KWSPPS
Sbjct: 121 KWSPPS 125

[Close]

BLAST of Moc11g01200 vs. NCBI nr
Match: KAG6608597.1 (hypothetical protein SDJN03_01939, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 148.7 bits (374), Expect = 3.4e-32
Identity = 83/115 (72.17%), Postives = 92/115 (80.00%), Query Frame = 0


Query: 1   MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQTKTV-FDFKLFLFAL 60
           MSW   ER  EWKYGWAERTM SMSLPPMPLLAF GVV+LLLSLQ++ + FDFKLFL AL
Sbjct: 1   MSWAEEERVQEWKYGWAERTMASMSLPPMPLLAFLGVVLLLLSLQSQDMAFDFKLFLLAL 60

Query: 61  ILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWGVAVLLFLLLILLWNR 115
             LLIF+ NS+ V G+V   A +RT  RS +EAEKTSPWG AVLLFLLLILLWNR
Sbjct: 61  PFLLIFIANSLLVAGSVASTA-MRTKNRSAQEAEKTSPWGAAVLLFLLLILLWNR 114

[Close]

BLAST of Moc11g01200 vs. NCBI nr
Match: KAG7037914.1 (hypothetical protein SDJN02_01545, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 147.5 bits (371), Expect = 7.6e-32
Identity = 82/115 (71.30%), Postives = 92/115 (80.00%), Query Frame = 0


Query: 1   MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQTKTV-FDFKLFLFAL 60
           MSW   ER PEWKYGWAERT+ SMS PPMPLLAF GVV+LLLSLQ++ + FDFKLFL AL
Sbjct: 1   MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMAFDFKLFLLAL 60

Query: 61  ILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWGVAVLLFLLLILLWNR 115
             LLIF+ NS+ V G+V   A +RT  RS +EAEKTSPWG AVLLFLLLILLWNR
Sbjct: 61  PFLLIFIANSLLVSGSVASTA-MRTKNRSAQEAEKTSPWGAAVLLFLLLILLWNR 114

[Close]

BLAST of Moc11g01200 vs. ExPASy TrEMBL
Match: A0A0A0LE80 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872200 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.2e-43
Identity = 98/126 (77.78%), Postives = 108/126 (85.71%), Query Frame = 0


Query: 1   MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQT-KTVFDFKLFLFAL 60
           MSW+V ERGPEWKYGW ER M+SMSLPPMPLLAF GVVVLLLSLQ+ + V DFKL L AL
Sbjct: 1   MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60

Query: 61  ILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWGVAVLLFLLLILLWNRPYFRS 120
             L+IFV NS+AV GT VG AS+RT +RS +EAE+TSPWG AVLLFLLLILLWNRPYFRS
Sbjct: 61  PFLMIFVANSVAVSGT-VGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRS 120

Query: 121 KWSPPS 126
           KWSPPS
Sbjct: 121 KWSPPS 125

[Close]

BLAST of Moc11g01200 vs. ExPASy TrEMBL
Match: A0A5A7V8G0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001100 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.3e-42
Identity = 96/126 (76.19%), Postives = 106/126 (84.13%), Query Frame = 0


Query: 1   MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQT-KTVFDFKLFLFAL 60
           MSW+V ERGPEWKYGW ER M SMSLPPMPLLAF GVVVLLLSLQ+ + V DFKL L AL
Sbjct: 1   MSWVVEERGPEWKYGWTERKMASMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60

Query: 61  ILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWGVAVLLFLLLILLWNRPYFRS 120
             L+IF  NS+AV GT VG A++RT +RS +EAE+TSPWG AVLLFLLLILLWNRPYFRS
Sbjct: 61  PFLIIFFANSVAVSGT-VGSAAMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRS 120

Query: 121 KWSPPS 126
           KWSPPS
Sbjct: 121 KWSPPS 125

[Close]

BLAST of Moc11g01200 vs. ExPASy TrEMBL
Match: A0A5D3E6P1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G008040 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.9e-42
Identity = 95/126 (75.40%), Postives = 105/126 (83.33%), Query Frame = 0


Query: 1   MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQT-KTVFDFKLFLFAL 60
           MSW+V ERGPEWKYGW ER M SMSLPPMPLLAF GVVVLLLSLQ+ + V DFKL L AL
Sbjct: 1   MSWVVEERGPEWKYGWTERKMASMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60

Query: 61  ILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWGVAVLLFLLLILLWNRPYFRS 120
              +IF  NS+AV GT VG A++RT +RS +EAE+TSPWG AVLLFLLLILLWNRPYFRS
Sbjct: 61  PFFIIFFANSVAVSGT-VGSAAMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRS 120

Query: 121 KWSPPS 126
           KWSPPS
Sbjct: 121 KWSPPS 125

[Close]

BLAST of Moc11g01200 vs. ExPASy TrEMBL
Match: A0A6J1FL09 (uncharacterized protein LOC111446211 OS=Cucurbita moschata OX=3662 GN=LOC111446211 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.8e-31
Identity = 81/115 (70.43%), Postives = 91/115 (79.13%), Query Frame = 0


Query: 1   MSWMVGERGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQTKTV-FDFKLFLFAL 60
           MSW   ER PEWKYGWAERT+ SMS PPMPLLAF GVV+LLLSLQ++ +  DFKLFL AL
Sbjct: 1   MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLAL 60

Query: 61  ILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWGVAVLLFLLLILLWNR 115
             LLIF+ NS+ V G+V   A +RT  RS +EAEKTSPWG AVLLFLLLILLWNR
Sbjct: 61  PFLLIFIANSLLVSGSVASTA-MRTKNRSAQEAEKTSPWGAAVLLFLLLILLWNR 114

[Close]

BLAST of Moc11g01200 vs. ExPASy TrEMBL
Match: W9RNV3 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016054 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 4.7e-19
Identity = 63/135 (46.67%), Postives = 84/135 (62.22%), Query Frame = 0


Query: 1   MSWMVGE--RGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQT---------KTV 60
           M W++ E   G  WK GW ERT+ S++ PP+PLLA  G+VV+LLS+ +         KTV
Sbjct: 1   MGWLIREDRSGSSWKLGWTERTLASLTAPPLPLLAIVGIVVVLLSVSSYANYKSQMQKTV 60

Query: 61  FDFKLFLFALILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKTSPWGVAVLLFLLLI 120
             F+LFL  L L+LIFV +S+  YGTV+     RT   +V E   T PWGV VLL +L +
Sbjct: 61  IGFRLFLLLLPLVLIFVAHSVTKYGTVL-VVRPRTKHEAVSEGGGT-PWGVVVLLVVLAV 120

Query: 121 LLWNRPYFRSKWSPP 125
           L+  + YF+SKW PP
Sbjct: 121 LISYQSYFQSKWWPP 133

[Close]

BLAST of Moc11g01200 vs. TAIR 10
Match: AT5G42146.1 (unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 74.7 bits (182), Expect = 5.8e-14
Identity = 49/135 (36.30%), Postives = 70/135 (51.85%), Query Frame = 0


Query: 1   MSWMVGE-RGPEWKYGWAERTMTSMSLPPMPLLAFFGVVVLLLSLQT---------KTVF 60
           M W + E RG  WK GW E T+ + S PP+ LLA   ++ LLL L +         KT  
Sbjct: 1   MGWFIKERRGGSWKRGWLEETLLTSSAPPLTLLALLAIISLLLFLSSYPRYKYEVEKTAA 60

Query: 61  DFKLFLFALILLLIFVVNSMAVYGTVV--GPASVRTTTRSVREAEKTSPWGVAVLLFLLL 120
           + KLF+  L +L +FV+ S++    ++     SVR         E   PWGV ++L LLL
Sbjct: 61  NLKLFMLFLPILFVFVLVSLSFVHRLLFKSSYSVRANQAKSLFGEGNFPWGVLLMLILLL 120

Query: 121 ILLWNRPYFRSKWSP 124
           +L+  + YF S W P
Sbjct: 121 LLVSKQSYFHSLWYP 135

The following BLAST results are available for this feature:

BLAST of Moc11g01200 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN60038.1	2.5e-43	77.78	hypothetical protein Csa_001668 [Cucumis sativus]	[more]
KAA0063287.1	2.8e-42	76.19	hypothetical protein E6C27_scaffold205G001100 [Cucumis melo var. makuwa]	[more]
TYK31488.1	8.1e-42	75.40	hypothetical protein E5676_scaffold455G008040 [Cucumis melo var. makuwa]	[more]
KAG6608597.1	3.4e-32	72.17	hypothetical protein SDJN03_01939, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7037914.1	7.6e-32	71.30	hypothetical protein SDJN02_01545, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Moc11g01200 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g01200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LE80	1.2e-43	77.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872200 PE=4 SV=1	[more]
A0A5A7V8G0	1.3e-42	76.19	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3E6P1	3.9e-42	75.40	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1FL09	1.8e-31	70.43	uncharacterized protein LOC111446211 OS=Cucurbita moschata OX=3662 GN=LOC1114462...	[more]
W9RNV3	4.7e-19	46.67	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016054 PE=4 SV=1	[more]

BLAST of Moc11g01200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42146.1	5.8e-14	36.30	unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33306:SF26	PROTEIN, PUTATIVE-RELATED	coord: 1..124
None	No IPR available	PANTHER	PTHR33306	EXPRESSED PROTEIN-RELATED-RELATED	coord: 1..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g01200.1	Moc11g01200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane