Moc11g00870 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc11g00870
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionF-box protein SKIP23-like
Locationchr11: 561176 .. 562323 (+)
RNA-Seq ExpressionMoc11g00870
SyntenyMoc11g00870
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGACTGGACTGAACTCCTACCTGAGCTTCTGCAATTGATCTCCGAAAATATCACCGTCCCCCGAAATCCCTCGCCATCTTCCTCCACAGCTCCCATGGCTGCTGATTCATCCGTACCACCGCTCCAGCTGTGACCTCTTCAACTTCTCCGACGACAATACCCACTTCCTCTACCTCCCGGAGGACTCTCACGGCCAGCGCCGGTGCGGTTCATCTCACGGCTGGGTCGCAATCCTCGACGAAACTCCGGCCATCCCCCTCCTGAACCCGATCACCGGAGCGACGATCCAATTACCGCCGCTCTCAACGTTTCCAAACGTCGTCTCTTTCGACGGTTCCAGAACCGGCCGAGAATACGAGGTCCGTGAATCCACAGGGCAAATCCACCACTACAATTCGTGTAAAATGCGCGATTGTTTCATCAACAAAATCGTTATATCTTCAGATCCATCAAATCAAAACGGTTTCACAGCGGTAGCGATTATCAGACTCTGCGGCAATTTGGTGTTCTGCCGAAACGGCGACGAATCATGGATTTTCGTAGACGACGGACCGCCCTGTTTCGAAGACGTCATATACTCCGAACCGACGGGGTATTCTACGCGGTGGATAAATTCGACGTGGTGTCGGCGATCGATTTAAGCAAATCGTACCCTAGCATCTCAACGGTTGCGACAGAATCGCGATTTATGATGAACACAACACGGTATGTGGTGAAATCAAGGGAGGAATTGCTGATGGTGATTCTGTTTTGGATGATATCTCGAAGCGGATTGAGAACGAAGGGTGGAATTGGATATTCATGAGCTCTCGGACGCTGCGATTTGAGGTGTTTCGGATGGAGTGGAGAGGGCAGGAATCACGATGGGAGAAGGTTGAGAGCTTGGAGGAGACGGCTCTGTTTTTGGGGAAAAATTCTTCCATCGCTTTCTCGGCAGCTGATTTTCCGGGAATTTCAGGGAACTGCATATATTATAGTGATGATTATGGGTGGGAAGATTATATGGAAGAGTGTCAACAGCCGGATGTGGGGATTTTCCGATTGGGCGACGAAAATTTCGAGCCGCTGCCGTATTACTCCTGGAGTTCCCGCGTCCTCCGTCCTTCATTTCCGCCCATCTGGGTTTCTCCCAATCCTTGCTAG

mRNA sequence

ATGCTCCCATGGCTGCTGATTCATCCGTACCACCGCTCCAGCTGTGACCTCTTCAACTTCTCCGACGACAATACCCACTTCCTCTACCTCCCGGAGGACTCTCACGGCCAGCGCCGGTGCGGTTCATCTCACGGCTGGGTCGCAATCCTCGACGAAACTCCGGCCATCCCCCTCCTGAACCCGATCACCGGAGCGACGATCCAATTACCGCCGCTCTCAACGTTTCCAAACGTCGTCTCTTTCGACGGTTCCAGAACCGGCCGAGAATACGAGGTCCGTGAATCCACAGGGCAAATCCACCACTACAATTCGTGTAAAATGCGCGATTGTTTCATCAACAAAATCGTTATATCTTCAGATCCATCAAATCAAAACGGTTTCACAGCGGTAGCGATTATCAGACTCTGCGGCAATTTGGTGTTCTGCCGAAACGGCGACGAATCATGGATTTTCGTAGACGACGGACCGCCCTGTTTCGAAGACGTCATATACTCCGAACCGACGGGAATCGCGATTTATGATGAACACAACACGGTATGTGGTGAAATCAAGGGAGGAATTGCTGATGGTGATTCTGTTTTGGATGATATCTCGAAGCGGATTGAGAACGAAGGGTGGAATTGGATATTCATGAGCTCTCGGACGCTGCGATTTGAGGTGTTTCGGATGGAGTGGAGAGGGCAGGAATCACGATGGGAGAAGGTTGAGAGCTTGGAGGAGACGGCTCTGTTTTTGGGGAAAAATTCTTCCATCGCTTTCTCGGCAGCTGATTTTCCGGGAATTTCAGGGAACTGCATATATTATAGTGATGATTATGGGTGGGAAGATTATATGGAAGAGTGTCAACAGCCGGATGTGGGGATTTTCCGATTGGGCGACGAAAATTTCGAGCCGCTGCCGTATTACTCCTGGAGTTCCCGCGTCCTCCGTCCTTCATTTCCGCCCATCTGGGTTTCTCCCAATCCTTGCTAG

Coding sequence (CDS)

ATGCTCCCATGGCTGCTGATTCATCCGTACCACCGCTCCAGCTGTGACCTCTTCAACTTCTCCGACGACAATACCCACTTCCTCTACCTCCCGGAGGACTCTCACGGCCAGCGCCGGTGCGGTTCATCTCACGGCTGGGTCGCAATCCTCGACGAAACTCCGGCCATCCCCCTCCTGAACCCGATCACCGGAGCGACGATCCAATTACCGCCGCTCTCAACGTTTCCAAACGTCGTCTCTTTCGACGGTTCCAGAACCGGCCGAGAATACGAGGTCCGTGAATCCACAGGGCAAATCCACCACTACAATTCGTGTAAAATGCGCGATTGTTTCATCAACAAAATCGTTATATCTTCAGATCCATCAAATCAAAACGGTTTCACAGCGGTAGCGATTATCAGACTCTGCGGCAATTTGGTGTTCTGCCGAAACGGCGACGAATCATGGATTTTCGTAGACGACGGACCGCCCTGTTTCGAAGACGTCATATACTCCGAACCGACGGGAATCGCGATTTATGATGAACACAACACGGTATGTGGTGAAATCAAGGGAGGAATTGCTGATGGTGATTCTGTTTTGGATGATATCTCGAAGCGGATTGAGAACGAAGGGTGGAATTGGATATTCATGAGCTCTCGGACGCTGCGATTTGAGGTGTTTCGGATGGAGTGGAGAGGGCAGGAATCACGATGGGAGAAGGTTGAGAGCTTGGAGGAGACGGCTCTGTTTTTGGGGAAAAATTCTTCCATCGCTTTCTCGGCAGCTGATTTTCCGGGAATTTCAGGGAACTGCATATATTATAGTGATGATTATGGGTGGGAAGATTATATGGAAGAGTGTCAACAGCCGGATGTGGGGATTTTCCGATTGGGCGACGAAAATTTCGAGCCGCTGCCGTATTACTCCTGGAGTTCCCGCGTCCTCCGTCCTTCATTTCCGCCCATCTGGGTTTCTCCCAATCCTTGCTAG

Protein sequence

MLPWLLIHPYHRSSCDLFNFSDDNTHFLYLPEDSHGQRRCGSSHGWVAILDETPAIPLLNPITGATIQLPPLSTFPNVVSFDGSRTGREYEVRESTGQIHHYNSCKMRDCFINKIVISSDPSNQNGFTAVAIIRLCGNLVFCRNGDESWIFVDDGPPCFEDVIYSEPTGIAIYDEHNTVCGEIKGGIADGDSVLDDISKRIENEGWNWIFMSSRTLRFEVFRMEWRGQESRWEKVESLEETALFLGKNSSIAFSAADFPGISGNCIYYSDDYGWEDYMEECQQPDVGIFRLGDENFEPLPYYSWSSRVLRPSFPPIWVSPNPC
Homology
BLAST of Moc11g00870 vs. NCBI nr
Match: XP_023536028.1 (F-box protein SKIP23-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 367.5 bits (942), Expect = 1.2e-97
Identity = 192/349 (55.01%), Postives = 237/349 (67.91%), Query Frame = 0

Query: 2   LPWLLIHPYHRSSCDLFNFSDDNTHFLYLPEDSHGQRRCGSSHGWVAILDETPAIPLLNP 61
           LPWL+I  YH S C LFNFSD+  HFL+LPE S G+RRCGSSHGW+AILDETP I LLNP
Sbjct: 50  LPWLIIPLYHDSRCGLFNFSDNKIHFLHLPEASLGKRRCGSSHGWLAILDETPTILLLNP 109

Query: 62  ITGATIQLPPLSTFPNVVSFDGSRTGREYEVRESTGQIHHYNSCKMRDCFINKIVISSDP 121
           +T A ++LPPLSTFPNVVSFD SR GREY +R  TG I+  N  +MRD F+ KIV+SS P
Sbjct: 110 LTRAKLRLPPLSTFPNVVSFDYSRVGREYLIRTPTGHIYSRNLRQMRDSFVKKIVLSSSP 169

Query: 122 SNQNGFTAVAIIRLCGNLVFCRNGDESWIFVDDGPPCFEDVIYSEPTGIAIYDEHNTV-- 181
           SNQN F+AVAI+   G+L FCR+G ESW FVDD P   ED++YS+    A+ D+H  +  
Sbjct: 170 SNQNDFSAVAILNHSGDLAFCRSGGESWTFVDDAPSDCEDIVYSDGLFYAV-DKHGVISV 229

Query: 182 -------------------CGEIKGGIADGDSV------LDDISKRIENEGWNWIFMSSR 241
                               G+I+  +  G  +      LD I+  + +E  + I+   R
Sbjct: 230 MDLRGSRSEVSLVTTGSQSAGDIQYLVKLGRELLLVSRYLDIINDAMVDELISVIY---R 289

Query: 242 TLRFEVFRMEWRGQESRWEKVESLEETALFLGKNSSIAFSAADFPGISGNCIYYSDDYGW 301
           T+RFEVFRMEW G   RWEKVE+L+E ALF+G NSS+AFSA+DF GISGNCIYY+DDY  
Sbjct: 290 TVRFEVFRMEWEG--PRWEKVENLDEMALFVGGNSSMAFSASDFGGISGNCIYYTDDYSD 349

Query: 302 EDYMEECQQPDVGIFRLGDENFEPLPYYSWSSRVLRPSFPPIWVSPNPC 324
            DY  + ++PD+GIFRL D +FE LPYYS  S   R   PPIWV+PNPC
Sbjct: 350 TDYQGQGEEPDMGIFRLCDGSFEQLPYYSGGSHSRRRLLPPIWVTPNPC 392

BLAST of Moc11g00870 vs. NCBI nr
Match: XP_022975457.1 (F-box protein SKIP23-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 364.8 bits (935), Expect = 7.8e-97
Identity = 191/349 (54.73%), Postives = 235/349 (67.34%), Query Frame = 0

Query: 2   LPWLLIHPYHRSSCDLFNFSDDNTHFLYLPEDSHGQRRCGSSHGWVAILDETPAIPLLNP 61
           LPWL+I  YH S C LFNFSD+  HFL+LPE S G+RRCGSSHGW+ ILDETP I LLNP
Sbjct: 50  LPWLIIPLYHDSRCGLFNFSDNKIHFLHLPEASLGRRRCGSSHGWLVILDETPTILLLNP 109

Query: 62  ITGATIQLPPLSTFPNVVSFDGSRTGREYEVRESTGQIHHYNSCKMRDCFINKIVISSDP 121
           +T A  +LPPLSTFPNVVSFD SR GREY +R  TG I+  N  +MRD F+ KIV+SS P
Sbjct: 110 LTRAKCRLPPLSTFPNVVSFDYSRIGREYLIRTPTGHIYSRNLRQMRDTFVKKIVLSSSP 169

Query: 122 SNQNGFTAVAIIRLCGNLVFCRNGDESWIFVDDGPPCFEDVIYSEPTGIAIYDEHNTV-- 181
           SNQN F+AVAI+   G+L FCR+G ESW FVDD P   ED++YS+    A+ D+H  +  
Sbjct: 170 SNQNDFSAVAILNHSGDLAFCRSGGESWTFVDDAPSDCEDIVYSDGLFYAV-DKHGVISV 229

Query: 182 -------------------CGEIKGGIADGDSV------LDDISKRIENEGWNWIFMSSR 241
                               G+I+  +  G  +      LD I+  + +E  + I+   R
Sbjct: 230 MDLRGSRSEVSLVTTGSQSAGDIQYLVKLGRELLLVSRYLDIINDAMVDELISVIY---R 289

Query: 242 TLRFEVFRMEWRGQESRWEKVESLEETALFLGKNSSIAFSAADFPGISGNCIYYSDDYGW 301
           T+RFEVFRMEW G   RWEKVE+L+E ALF+G NSS+AFSA+DF GISGNCIYY+DDY  
Sbjct: 290 TVRFEVFRMEWEG--PRWEKVENLDEMALFVGGNSSMAFSASDFGGISGNCIYYTDDYSD 349

Query: 302 EDYMEECQQPDVGIFRLGDENFEPLPYYSWSSRVLRPSFPPIWVSPNPC 324
            DY  + ++PD+GIFRL D +FE LPYYS  S   R   PPIWV+PNPC
Sbjct: 350 NDYQGQGEEPDMGIFRLCDGSFEQLPYYSGGSHSRRRLLPPIWVTPNPC 392

BLAST of Moc11g00870 vs. NCBI nr
Match: KAG6591244.1 (F-box protein SKIP23, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 363.6 bits (932), Expect = 1.7e-96
Identity = 188/346 (54.34%), Postives = 232/346 (67.05%), Query Frame = 0

Query: 2   LPWLLIHPYHRSSCDLFNFSDDNTHFLYLPEDSHGQRRCGSSHGWVAILDETPAIPLLNP 61
           LPWL+I  YH S C LFNFSD+  HFL+LPE S G+RRCGSSHGW+AI+DE P I LLNP
Sbjct: 50  LPWLIIPLYHDSRCGLFNFSDNKIHFLHLPEASLGKRRCGSSHGWLAIVDENPTILLLNP 109

Query: 62  ITGATIQLPPLSTFPNVVSFDGSRTGREYEVRESTGQIHHYNSCKMRDCFINKIVISSDP 121
           +T A ++LPPLSTFPNVVSFD SR GREY +R  TG I+  N  +MRD F+ KIV+SS P
Sbjct: 110 LTRAKLRLPPLSTFPNVVSFDYSRVGREYLIRTPTGHIYSRNLRQMRDSFVKKIVLSSSP 169

Query: 122 SNQNGFTAVAIIRLCGNLVFCRNGDESWIFVDDGPPCFEDVIYSEPTGIAIYDEHNTV-C 181
           SN+N F+AVAI+   G+L FCR G ESW FVDD P   ED++YS+    A+ D+H  +  
Sbjct: 170 SNRNDFSAVAILNHSGDLAFCRRGGESWTFVDDAPSDCEDIVYSDGLFYAV-DKHGVISV 229

Query: 182 GEIKGG------IADGDSVLDDISKRIE---------------NEGW--NWIFMSSRTLR 241
            +++G       +  G     DI   ++               NE      I +  RT+R
Sbjct: 230 MDLRGSHSEVSLVTTGSQSAGDIQYLVKLGRELLLVSRYLDIINEAMVDELISVIYRTVR 289

Query: 242 FEVFRMEWRGQESRWEKVESLEETALFLGKNSSIAFSAADFPGISGNCIYYSDDYGWEDY 301
           FEVFRMEW G   RWEKVE+L+E ALF+G NSS+AFSA+DF GISGNCIYY+DDY   DY
Sbjct: 290 FEVFRMEWEG--PRWEKVENLDEMALFVGGNSSMAFSASDFGGISGNCIYYTDDYSDTDY 349

Query: 302 MEECQQPDVGIFRLGDENFEPLPYYSWSSRVLRPSFPPIWVSPNPC 324
             + ++PD+GIFRL D +FE LPYYS  S   R   PPIWV+PNPC
Sbjct: 350 QGQGEEPDMGIFRLCDGSFEQLPYYSGGSHSRRRLLPPIWVTPNPC 392

BLAST of Moc11g00870 vs. NCBI nr
Match: XP_022936291.1 (F-box protein SKIP23-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 362.5 bits (929), Expect = 3.9e-96
Identity = 189/349 (54.15%), Postives = 236/349 (67.62%), Query Frame = 0

Query: 2   LPWLLIHPYHRSSCDLFNFSDDNTHFLYLPEDSHGQRRCGSSHGWVAILDETPAIPLLNP 61
           LPWL+I  YH S C LFNFSD+  HFL+LPE S G+RRCGSSHGW+AI+DE P I LLNP
Sbjct: 50  LPWLIIPLYHDSRCGLFNFSDNKIHFLHLPEASLGKRRCGSSHGWLAIVDENPTILLLNP 109

Query: 62  ITGATIQLPPLSTFPNVVSFDGSRTGREYEVRESTGQIHHYNSCKMRDCFINKIVISSDP 121
           +T A ++LPPLSTFPNVVSFD SR GREY +R  TG I+  N  +MRD F+ KIV+SS P
Sbjct: 110 LTRAKLRLPPLSTFPNVVSFDYSRVGREYLIRTPTGHIYSRNLRQMRDSFLKKIVLSSSP 169

Query: 122 SNQNGFTAVAIIRLCGNLVFCRNGDESWIFVDDGPPCFEDVIYSEPTGIAIYDEHNTV-- 181
           SNQN F+AVAI+   G+L FCR+G ESW FV+D P   ED++YS+    A+ D+H  +  
Sbjct: 170 SNQNDFSAVAILNHSGDLAFCRSGGESWTFVNDAPSDCEDIVYSDGLFYAV-DKHGVISV 229

Query: 182 -------------------CGEIKGGIADGDSV------LDDISKRIENEGWNWIFMSSR 241
                               G+I+  +  G  +      LD I+  + +E  + I+   R
Sbjct: 230 MDLRGSHSEVSLVTTGSQSAGDIQYLVKLGRELLLVSRYLDIINDAMVDELISVIY---R 289

Query: 242 TLRFEVFRMEWRGQESRWEKVESLEETALFLGKNSSIAFSAADFPGISGNCIYYSDDYGW 301
           T+RFEVFRMEW G   RWEKVE+L+E ALF+G NSS+AFSA+DF GISGNCIYY+DDY  
Sbjct: 290 TVRFEVFRMEWEG--PRWEKVENLDEMALFVGGNSSMAFSASDFGGISGNCIYYTDDYSD 349

Query: 302 EDYMEECQQPDVGIFRLGDENFEPLPYYSWSSRVLRPSFPPIWVSPNPC 324
            DY  + ++PD+GIFRL D +FE LPYYS  S   R   PPIWV+PNPC
Sbjct: 350 NDYQGQGEEPDMGIFRLCDGSFEQLPYYSGGSHSRRRLLPPIWVTPNPC 392

BLAST of Moc11g00870 vs. NCBI nr
Match: KAG7024128.1 (F-box protein SKIP23, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 362.1 bits (928), Expect = 5.1e-96
Identity = 190/349 (54.44%), Postives = 234/349 (67.05%), Query Frame = 0

Query: 2   LPWLLIHPYHRSSCDLFNFSDDNTHFLYLPEDSHGQRRCGSSHGWVAILDETPAIPLLNP 61
           LPWL+I  YH S C LFNFSD+  HFL+LPE S G+RRCGSSHGW+AI+DE P I LLNP
Sbjct: 50  LPWLIIPLYHDSRCGLFNFSDNKIHFLHLPEASLGKRRCGSSHGWLAIVDENPTILLLNP 109

Query: 62  ITGATIQLPPLSTFPNVVSFDGSRTGREYEVRESTGQIHHYNSCKMRDCFINKIVISSDP 121
           +T A ++LPPLSTFPNVVSFD SR GREY +R  TG I+  N  +MRD F+ KIV+SS P
Sbjct: 110 LTRAKLRLPPLSTFPNVVSFDYSRVGREYLIRTPTGHIYSRNLRQMRDSFVKKIVLSSSP 169

Query: 122 SNQNGFTAVAIIRLCGNLVFCRNGDESWIFVDDGPPCFEDVIYSEPTGIAIYDEHNTVC- 181
           SN+N F+AVAI+   G+L FCR G ESW FVDD P   ED++YS+    A+ D+H  +  
Sbjct: 170 SNRNDFSAVAILNHSGDLAFCRRGGESWTFVDDAPSDCEDIVYSDGLFYAV-DKHGVISV 229

Query: 182 -------GEIK----GGIADGD---------------SVLDDISKRIENEGWNWIFMSSR 241
                   E+     G  + GD                 LD I+  + +E  + I+   R
Sbjct: 230 MDLRGSHSEVSLVTTGSQSAGDIHYLVKLGRELLLVSRYLDIINDAMVDELISVIY---R 289

Query: 242 TLRFEVFRMEWRGQESRWEKVESLEETALFLGKNSSIAFSAADFPGISGNCIYYSDDYGW 301
           T+RFEVFRMEW G   RWEKVE+L+E ALF+G NSS+AFSA+DF GISGNCIYY+DDY  
Sbjct: 290 TVRFEVFRMEWEG--PRWEKVENLDEMALFVGGNSSMAFSASDFGGISGNCIYYTDDYSD 349

Query: 302 EDYMEECQQPDVGIFRLGDENFEPLPYYSWSSRVLRPSFPPIWVSPNPC 324
            DY  + ++PD+GIFRL D +FE LPYYS  S   R   PPIWV+PNPC
Sbjct: 350 TDYQGQGEEPDMGIFRLCDGSFEQLPYYSGGSHSRRRLLPPIWVTPNPC 392

BLAST of Moc11g00870 vs. ExPASy Swiss-Prot
Match: Q9LVG8 (Putative F-box protein At5g60060 OS=Arabidopsis thaliana OX=3702 GN=At5g60060 PE=4 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 5.6e-05
Identity = 57/217 (26.27%), Postives = 94/217 (43.32%), Query Frame = 0

Query: 113 NKIVISSDPSNQNGFTAVAIIRLCGNLVFCRNG-DESWIFVDDG-PPCFEDV-IYSEPTG 172
           +K+VI S   +    +A+  I   G L F ++G DE W  +D+     +ED+ +Y +   
Sbjct: 167 DKVVILSSGED----SAIIAIHSGGKLGFLKSGNDEKWKILDNSWNVIYEDIMLYKDNRC 226

Query: 173 IAIYDEHNTVCGEIKGGIAD--------------------GDSVLDDISKRIENEGWNWI 232
           I + D+  TV  ++   ++D                    G+  L D   +     W   
Sbjct: 227 IVVDDKGKTVIYDVDFKVSDLAEGLVGGGGHKKHLVECSGGEVFLVD---KYVKTVWCKS 286

Query: 233 FMSSRTLRFEVFRMEWRGQESRWEKVESLEETALFLGKNSSIAFSAADFPG-ISGNCIYY 292
            +S   + F V+ +  + +E RWE+V  L + ALF+G + S  FS  +  G ++G  I+Y
Sbjct: 287 DISKSVVEFRVYNL--KREEKRWEEVRDLGDVALFIGDDCS--FSVQNPAGDLAGGFIFY 346

Query: 293 SDDYGWEDYMEECQQPDVGIFRL---GDENFEPLPYY 303
           SD          C   D G+F +   GD  F   P Y
Sbjct: 347 SDYRNGGRSRGICSDGD-GVFNVDMQGDFVFSIKPNY 371

BLAST of Moc11g00870 vs. ExPASy Swiss-Prot
Match: Q9ZUF1 (F-box protein At2g05970 OS=Arabidopsis thaliana OX=3702 GN=At2g05970 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 3.6e-04
Identity = 34/99 (34.34%), Postives = 49/99 (49.49%), Query Frame = 0

Query: 209 IFMSSRTLRFEVFRMEWRGQESRWEKVESLEETALFLGKNSSIAFSAADFPGISGNCIYY 268
           +   S+   F +++M +   + RWE++ESL + AL L  +  I   A D PG+  N IY 
Sbjct: 271 VVQKSKRWLFRIYKMNY--IKRRWERIESLGDEALIL--DMGITIVAKDIPGLKRNSIYI 330

Query: 269 SD-DYGWEDYMEECQQPDVGIFRLGDENFEPLPYYSWSS 307
           S  DYG +          + IF L  +  EPLPY   SS
Sbjct: 331 SGFDYGRK------HLDHIFIFDLTTQESEPLPYCVSSS 359

BLAST of Moc11g00870 vs. ExPASy TrEMBL
Match: A0A6J1ID46 (F-box protein SKIP23-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111474793 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 3.8e-97
Identity = 191/349 (54.73%), Postives = 235/349 (67.34%), Query Frame = 0

Query: 2   LPWLLIHPYHRSSCDLFNFSDDNTHFLYLPEDSHGQRRCGSSHGWVAILDETPAIPLLNP 61
           LPWL+I  YH S C LFNFSD+  HFL+LPE S G+RRCGSSHGW+ ILDETP I LLNP
Sbjct: 50  LPWLIIPLYHDSRCGLFNFSDNKIHFLHLPEASLGRRRCGSSHGWLVILDETPTILLLNP 109

Query: 62  ITGATIQLPPLSTFPNVVSFDGSRTGREYEVRESTGQIHHYNSCKMRDCFINKIVISSDP 121
           +T A  +LPPLSTFPNVVSFD SR GREY +R  TG I+  N  +MRD F+ KIV+SS P
Sbjct: 110 LTRAKCRLPPLSTFPNVVSFDYSRIGREYLIRTPTGHIYSRNLRQMRDTFVKKIVLSSSP 169

Query: 122 SNQNGFTAVAIIRLCGNLVFCRNGDESWIFVDDGPPCFEDVIYSEPTGIAIYDEHNTV-- 181
           SNQN F+AVAI+   G+L FCR+G ESW FVDD P   ED++YS+    A+ D+H  +  
Sbjct: 170 SNQNDFSAVAILNHSGDLAFCRSGGESWTFVDDAPSDCEDIVYSDGLFYAV-DKHGVISV 229

Query: 182 -------------------CGEIKGGIADGDSV------LDDISKRIENEGWNWIFMSSR 241
                               G+I+  +  G  +      LD I+  + +E  + I+   R
Sbjct: 230 MDLRGSRSEVSLVTTGSQSAGDIQYLVKLGRELLLVSRYLDIINDAMVDELISVIY---R 289

Query: 242 TLRFEVFRMEWRGQESRWEKVESLEETALFLGKNSSIAFSAADFPGISGNCIYYSDDYGW 301
           T+RFEVFRMEW G   RWEKVE+L+E ALF+G NSS+AFSA+DF GISGNCIYY+DDY  
Sbjct: 290 TVRFEVFRMEWEG--PRWEKVENLDEMALFVGGNSSMAFSASDFGGISGNCIYYTDDYSD 349

Query: 302 EDYMEECQQPDVGIFRLGDENFEPLPYYSWSSRVLRPSFPPIWVSPNPC 324
            DY  + ++PD+GIFRL D +FE LPYYS  S   R   PPIWV+PNPC
Sbjct: 350 NDYQGQGEEPDMGIFRLCDGSFEQLPYYSGGSHSRRRLLPPIWVTPNPC 392

BLAST of Moc11g00870 vs. ExPASy TrEMBL
Match: A0A6J1F731 (F-box protein SKIP23-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442958 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.9e-96
Identity = 189/349 (54.15%), Postives = 236/349 (67.62%), Query Frame = 0

Query: 2   LPWLLIHPYHRSSCDLFNFSDDNTHFLYLPEDSHGQRRCGSSHGWVAILDETPAIPLLNP 61
           LPWL+I  YH S C LFNFSD+  HFL+LPE S G+RRCGSSHGW+AI+DE P I LLNP
Sbjct: 50  LPWLIIPLYHDSRCGLFNFSDNKIHFLHLPEASLGKRRCGSSHGWLAIVDENPTILLLNP 109

Query: 62  ITGATIQLPPLSTFPNVVSFDGSRTGREYEVRESTGQIHHYNSCKMRDCFINKIVISSDP 121
           +T A ++LPPLSTFPNVVSFD SR GREY +R  TG I+  N  +MRD F+ KIV+SS P
Sbjct: 110 LTRAKLRLPPLSTFPNVVSFDYSRVGREYLIRTPTGHIYSRNLRQMRDSFLKKIVLSSSP 169

Query: 122 SNQNGFTAVAIIRLCGNLVFCRNGDESWIFVDDGPPCFEDVIYSEPTGIAIYDEHNTV-- 181
           SNQN F+AVAI+   G+L FCR+G ESW FV+D P   ED++YS+    A+ D+H  +  
Sbjct: 170 SNQNDFSAVAILNHSGDLAFCRSGGESWTFVNDAPSDCEDIVYSDGLFYAV-DKHGVISV 229

Query: 182 -------------------CGEIKGGIADGDSV------LDDISKRIENEGWNWIFMSSR 241
                               G+I+  +  G  +      LD I+  + +E  + I+   R
Sbjct: 230 MDLRGSHSEVSLVTTGSQSAGDIQYLVKLGRELLLVSRYLDIINDAMVDELISVIY---R 289

Query: 242 TLRFEVFRMEWRGQESRWEKVESLEETALFLGKNSSIAFSAADFPGISGNCIYYSDDYGW 301
           T+RFEVFRMEW G   RWEKVE+L+E ALF+G NSS+AFSA+DF GISGNCIYY+DDY  
Sbjct: 290 TVRFEVFRMEWEG--PRWEKVENLDEMALFVGGNSSMAFSASDFGGISGNCIYYTDDYSD 349

Query: 302 EDYMEECQQPDVGIFRLGDENFEPLPYYSWSSRVLRPSFPPIWVSPNPC 324
            DY  + ++PD+GIFRL D +FE LPYYS  S   R   PPIWV+PNPC
Sbjct: 350 NDYQGQGEEPDMGIFRLCDGSFEQLPYYSGGSHSRRRLLPPIWVTPNPC 392

BLAST of Moc11g00870 vs. ExPASy TrEMBL
Match: A0A6J1BTM6 (F-box protein SKIP23-like OS=Momordica charantia OX=3673 GN=LOC111005646 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 1.0e-94
Identity = 189/349 (54.15%), Postives = 236/349 (67.62%), Query Frame = 0

Query: 2   LPWLLIHPYHRSSCDLFNFSDDNTHFLYLPEDSHGQRRCGSSHGWVAILDETPAIPLLNP 61
           LPWL I  YH S C LFNFSD+  HFL+LPE S G+RRCGSSHGW+A+LDETP I LLNP
Sbjct: 52  LPWLFIPLYHHSRCALFNFSDNKIHFLHLPEASLGKRRCGSSHGWLAVLDETPTILLLNP 111

Query: 62  ITGATIQLPPLSTFPNVVSFDGSRTGREYEVRESTGQIHHYNSCKMRDCFINKIVISSDP 121
           IT A++ LPPLSTFPNVVSFD SR GREY +R  TG I+  N  +MRD F+ KIV+SS P
Sbjct: 112 ITRASLPLPPLSTFPNVVSFDYSRVGREYVIRTPTGHIYARNLRQMRDSFVKKIVLSSSP 171

Query: 122 SNQNGFTAVAIIRLCGNLVFCRNGDESWIFVDDGPPCFEDVIYSEPTGIAIYDEHNTVC- 181
            NQ+ F+AVAI+   G+L  CR+G  SW FVDD P   ED+I+ +    A+ D++  V  
Sbjct: 172 -NQSDFSAVAILNRSGDLAVCRSGAGSWTFVDDAPSDCEDIIFHDGLFYAV-DKYGLVSV 231

Query: 182 --------------------GEIKGGIADGDSV------LDDISKRIENEGWNWIFMSSR 241
                               G+I+  +  G+ V      LD ++  ++++  + I+   R
Sbjct: 232 IDLRDLRPRVSPVTTARQLRGDIQYLVKSGNEVLLVTRYLDIVNDAMDDDRRSVIY---R 291

Query: 242 TLRFEVFRMEWRGQESRWEKVESLEETALFLGKNSSIAFSAADFPGISGNCIYYSDDYGW 301
           T+RFEVFRMEW G   RWEKVESL+E A+F+G+NSSIAFSAADF GISGNCIYY+DDY  
Sbjct: 292 TVRFEVFRMEWDG--PRWEKVESLDEMAVFVGENSSIAFSAADFSGISGNCIYYTDDYSE 351

Query: 302 EDYMEECQQPDVGIFRLGDENFEPLPYYSWSSRVLRPSFPPIWVSPNPC 324
            DY  + ++PD+GIFRLG E+ E LPYYS SS   R   PPIW+SPNPC
Sbjct: 352 NDYDGDGEEPDMGIFRLGLESVEELPYYSGSSHSRRRLLPPIWLSPNPC 393

BLAST of Moc11g00870 vs. ExPASy TrEMBL
Match: A0A5A7VGI0 (F-box protein SKIP23-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00870 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 3.9e-94
Identity = 190/347 (54.76%), Postives = 232/347 (66.86%), Query Frame = 0

Query: 2   LPWLLIHPYHRSSCDLFNFSDDNTHFLYLPEDSHGQRRCGSSHGWVAILDETPAIPLLNP 61
           LP L+I  YH   C LFNFSD+  HFLYLPE S  +R CGSSHGW+ ILDETP+I LLNP
Sbjct: 50  LPCLIIPLYHDCRCGLFNFSDNKIHFLYLPEASLRKRPCGSSHGWLTILDETPSILLLNP 109

Query: 62  ITGATIQLPPLSTFPNVVSFDGSRTGREYEVRESTGQIHHYNSCKMRDCFINKIVISSDP 121
           +T A  +LPPLSTFPNVVSFD SR GREY +R  TG I+  N  +MRD F+ KIV+SS P
Sbjct: 110 LTRAKFRLPPLSTFPNVVSFDYSRVGREYLIRTPTGHIYTRNLRQMRDSFVKKIVLSSSP 169

Query: 122 SNQNGFTAVAIIRLCGNLVFCRNGDESWIFVDDGPPCFEDVIYSEPTGIAIYDEHNTV-- 181
           SNQN F AVAI+   G+L FCR+G  SW FVDD P   EDVIY++    A+ D++  V  
Sbjct: 170 SNQNDFLAVAILNHSGDLAFCRSGGGSWTFVDDAPSDCEDVIYTDGVFYAV-DKYGVVSL 229

Query: 182 -------------------CGEIKGGIADGDSVLDDISKRIE--NEGWN--WIFMSSRTL 241
                               G+I+  +  G  +L  +S+ ++  N+G +   I +  RT+
Sbjct: 230 MDLRGSRSQVSLVATERQLAGDIQYLVRLGQELL-LVSRYLDIVNDGMDDELISVMYRTV 289

Query: 242 RFEVFRMEWRGQESRWEKVESLEETALFLGKNSSIAFSAADFPGISGNCIYYSDDYGWED 301
           RFEVFRMEW G   RWEKVE+L E ALF+G NSS+AFSAADF  ISGNCIYY+DDY   D
Sbjct: 290 RFEVFRMEWEG--PRWEKVENLNEMALFVGGNSSMAFSAADFGEISGNCIYYTDDYSDSD 349

Query: 302 YMEECQQPDVGIFRLGDENFEPLPYYSWSSRVLRPSFPPIWVSPNPC 324
           Y  + ++PD+GIFRL DE+FEPLPYYS  S   R   PPIWV+PNPC
Sbjct: 350 YQGQGEEPDMGIFRLCDESFEPLPYYSGGSHSRRRLLPPIWVTPNPC 392

BLAST of Moc11g00870 vs. ExPASy TrEMBL
Match: E5GCD1 (Ubiquitin-protein ligase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 3.9e-94
Identity = 190/347 (54.76%), Postives = 232/347 (66.86%), Query Frame = 0

Query: 2   LPWLLIHPYHRSSCDLFNFSDDNTHFLYLPEDSHGQRRCGSSHGWVAILDETPAIPLLNP 61
           LP L+I  YH   C LFNFSD+  HFLYLPE S  +R CGSSHGW+ ILDETP+I LLNP
Sbjct: 50  LPCLIIPLYHDCRCGLFNFSDNKIHFLYLPEASLRKRPCGSSHGWLTILDETPSILLLNP 109

Query: 62  ITGATIQLPPLSTFPNVVSFDGSRTGREYEVRESTGQIHHYNSCKMRDCFINKIVISSDP 121
           +T A  +LPPLSTFPNVVSFD SR GREY +R  TG I+  N  +MRD F+ KIV+SS P
Sbjct: 110 LTRAKFRLPPLSTFPNVVSFDYSRVGREYLIRTPTGHIYTRNLRQMRDSFVKKIVLSSSP 169

Query: 122 SNQNGFTAVAIIRLCGNLVFCRNGDESWIFVDDGPPCFEDVIYSEPTGIAIYDEHNTV-- 181
           SNQN F AVAI+   G+L FCR+G  SW FVDD P   EDVIY++    A+ D++  V  
Sbjct: 170 SNQNDFLAVAILNHSGDLAFCRSGGGSWTFVDDAPSDCEDVIYTDGVFYAV-DKYGVVSL 229

Query: 182 -------------------CGEIKGGIADGDSVLDDISKRIE--NEGWN--WIFMSSRTL 241
                               G+I+  +  G  +L  +S+ ++  N+G +   I +  RT+
Sbjct: 230 MDLRGSRSQVSLVATERQLAGDIQYLVRLGQELL-LVSRYLDIVNDGMDDELISVMYRTV 289

Query: 242 RFEVFRMEWRGQESRWEKVESLEETALFLGKNSSIAFSAADFPGISGNCIYYSDDYGWED 301
           RFEVFRMEW G   RWEKVE+L E ALF+G NSS+AFSAADF  ISGNCIYY+DDY   D
Sbjct: 290 RFEVFRMEWEG--PRWEKVENLNEMALFVGGNSSMAFSAADFGEISGNCIYYTDDYSDSD 349

Query: 302 YMEECQQPDVGIFRLGDENFEPLPYYSWSSRVLRPSFPPIWVSPNPC 324
           Y  + ++PD+GIFRL DE+FEPLPYYS  S   R   PPIWV+PNPC
Sbjct: 350 YQGQGEEPDMGIFRLCDESFEPLPYYSGGSHSRRRLLPPIWVTPNPC 392

BLAST of Moc11g00870 vs. TAIR 10
Match: AT5G60060.1 (Protein of unknown function (DUF295) )

HSP 1 Score: 50.1 bits (118), Expect = 4.0e-06
Identity = 57/217 (26.27%), Postives = 94/217 (43.32%), Query Frame = 0

Query: 113 NKIVISSDPSNQNGFTAVAIIRLCGNLVFCRNG-DESWIFVDDG-PPCFEDV-IYSEPTG 172
           +K+VI S   +    +A+  I   G L F ++G DE W  +D+     +ED+ +Y +   
Sbjct: 167 DKVVILSSGED----SAIIAIHSGGKLGFLKSGNDEKWKILDNSWNVIYEDIMLYKDNRC 226

Query: 173 IAIYDEHNTVCGEIKGGIAD--------------------GDSVLDDISKRIENEGWNWI 232
           I + D+  TV  ++   ++D                    G+  L D   +     W   
Sbjct: 227 IVVDDKGKTVIYDVDFKVSDLAEGLVGGGGHKKHLVECSGGEVFLVD---KYVKTVWCKS 286

Query: 233 FMSSRTLRFEVFRMEWRGQESRWEKVESLEETALFLGKNSSIAFSAADFPG-ISGNCIYY 292
            +S   + F V+ +  + +E RWE+V  L + ALF+G + S  FS  +  G ++G  I+Y
Sbjct: 287 DISKSVVEFRVYNL--KREEKRWEEVRDLGDVALFIGDDCS--FSVQNPAGDLAGGFIFY 346

Query: 293 SDDYGWEDYMEECQQPDVGIFRL---GDENFEPLPYY 303
           SD          C   D G+F +   GD  F   P Y
Sbjct: 347 SDYRNGGRSRGICSDGD-GVFNVDMQGDFVFSIKPNY 371

BLAST of Moc11g00870 vs. TAIR 10
Match: AT2G05970.1 (F-box family protein with a domain of unknown function (DUF295) )

HSP 1 Score: 47.4 bits (111), Expect = 2.6e-05
Identity = 34/99 (34.34%), Postives = 49/99 (49.49%), Query Frame = 0

Query: 209 IFMSSRTLRFEVFRMEWRGQESRWEKVESLEETALFLGKNSSIAFSAADFPGISGNCIYY 268
           +   S+   F +++M +   + RWE++ESL + AL L  +  I   A D PG+  N IY 
Sbjct: 271 VVQKSKRWLFRIYKMNY--IKRRWERIESLGDEALIL--DMGITIVAKDIPGLKRNSIYI 330

Query: 269 SD-DYGWEDYMEECQQPDVGIFRLGDENFEPLPYYSWSS 307
           S  DYG +          + IF L  +  EPLPY   SS
Sbjct: 331 SGFDYGRK------HLDHIFIFDLTTQESEPLPYCVSSS 359

BLAST of Moc11g00870 vs. TAIR 10
Match: AT1G69090.1 (Protein of unknown function (DUF295) )

HSP 1 Score: 43.1 bits (100), Expect = 4.9e-04
Identity = 34/111 (30.63%), Postives = 56/111 (50.45%), Query Frame = 0

Query: 210 FMSSRTLRFEVFRMEWRGQESRWEKVESLEETALFLGKNSSIAFSAADFPGISGNCIYYS 269
           F  + T  F + +M+   + ++WE++ SL + ++ LG    I   A D  GI+ N IY++
Sbjct: 296 FSMAETWEFIICKMD-SSKVNKWEEIVSLGDESILLG--LGITVLAKDMEGITCNSIYFT 355

Query: 270 DDYGWEDYMEECQQPDVGIFRLGDENFEPLPYYSWSSRVLRPSFPPIWVSP 321
            D  +EDY E     ++ I+ L D N   +P+   SS +  PS    W  P
Sbjct: 356 ADDFYEDYEEN----EIFIYNL-DTNKVEIPHQFVSSSI--PSAHARWFLP 396

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023536028.11.2e-9755.01F-box protein SKIP23-like [Cucurbita pepo subsp. pepo][more]
XP_022975457.17.8e-9754.73F-box protein SKIP23-like isoform X2 [Cucurbita maxima][more]
KAG6591244.11.7e-9654.34F-box protein SKIP23, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022936291.13.9e-9654.15F-box protein SKIP23-like isoform X2 [Cucurbita moschata][more]
KAG7024128.15.1e-9654.44F-box protein SKIP23, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
Match NameE-valueIdentityDescription
Q9LVG85.6e-0526.27Putative F-box protein At5g60060 OS=Arabidopsis thaliana OX=3702 GN=At5g60060 PE... [more]
Q9ZUF13.6e-0434.34F-box protein At2g05970 OS=Arabidopsis thaliana OX=3702 GN=At2g05970 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1ID463.8e-9754.73F-box protein SKIP23-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111474793... [more]
A0A6J1F7311.9e-9654.15F-box protein SKIP23-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114429... [more]
A0A6J1BTM61.0e-9454.15F-box protein SKIP23-like OS=Momordica charantia OX=3673 GN=LOC111005646 PE=4 SV... [more]
A0A5A7VGI03.9e-9454.76F-box protein SKIP23-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
E5GCD13.9e-9454.76Ubiquitin-protein ligase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G60060.14.0e-0626.27Protein of unknown function (DUF295) [more]
AT2G05970.12.6e-0534.34F-box family protein with a domain of unknown function (DUF295) [more]
AT1G69090.14.9e-0430.63Protein of unknown function (DUF295) [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005174Domain unknown function DUF295PFAMPF03478DUF295coord: 233..289
e-value: 1.4E-14
score: 53.5
NoneNo IPR availablePANTHERPTHR44259:SF67F-BOX PROTEIN SKIP23-LIKEcoord: 2..321
NoneNo IPR availablePANTHERPTHR44259OS07G0183000 PROTEIN-RELATEDcoord: 2..321

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc11g00870.1Moc11g00870.1mRNA