Moc11g00700 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g00700
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Transcription activator-like protein
Location	chr11: 455104 .. 455403 (-)
RNA-Seq Expression	Moc11g00700
Synteny	Moc11g00700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGGAATCAGAAGATCGAGATGGAGCGGGAGGAGCAGAGGCGAGAAGAAACGAAGAAGATGGAGCAACAACCGCCGCAAAATATTTCTCCGATGCAACCGTTGACGGAAAGTGCTTACGGCGGAGGAATGTACGGCGCCGAGGAAGGCCAACAGCAACTCCTGAAGAAGAAACCGGCGAGCGACACGCAGAGCGCCGATGGACCGGTTGAAGCCGGAATGAAGCCGAAGCATGCGCCTCCGCCGTCGTCCGGCGACAGAGATATCGACATCACCGGCCAGTCGTATTTTCAGTAG

mRNA sequence

ATGGAAAGGAATCAGAAGATCGAGATGGAGCGGGAGGAGCAGAGGCGAGAAGAAACGAAGAAGATGGAGCAACAACCGCCGCAAAATATTTCTCCGATGCAACCGTTGACGGAAAGTGCTTACGGCGGAGGAATGTACGGCGCCGAGGAAGGCCAACAGCAACTCCTGAAGAAGAAACCGGCGAGCGACACGCAGAGCGCCGATGGACCGGTTGAAGCCGGAATGAAGCCGAAGCATGCGCCTCCGCCGTCGTCCGGCGACAGAGATATCGACATCACCGGCCAGTCGTATTTTCAGTAG

Coding sequence (CDS)

ATGGAAAGGAATCAGAAGATCGAGATGGAGCGGGAGGAGCAGAGGCGAGAAGAAACGAAGAAGATGGAGCAACAACCGCCGCAAAATATTTCTCCGATGCAACCGTTGACGGAAAGTGCTTACGGCGGAGGAATGTACGGCGCCGAGGAAGGCCAACAGCAACTCCTGAAGAAGAAACCGGCGAGCGACACGCAGAGCGCCGATGGACCGGTTGAAGCCGGAATGAAGCCGAAGCATGCGCCTCCGCCGTCGTCCGGCGACAGAGATATCGACATCACCGGCCAGTCGTATTTTCAGTAG

Protein sequence

MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ

Homology

[Close]

BLAST of Moc11g00700 vs. NCBI nr
Match: XP_022132786.1 (uncharacterized protein LOC111005558 [Momordica charantia])

HSP 1 Score: 190.3 bits (482), Expect = 8.1e-45
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKP 60
           MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKP
Sbjct: 1   MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKP 60

Query: 61  ASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ 100
           ASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ
Sbjct: 61  ASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ 99

[Close]

BLAST of Moc11g00700 vs. NCBI nr
Match: XP_022936823.1 (uncharacterized protein LOC111443294 [Cucurbita moschata] >XP_022976625.1 uncharacterized protein LOC111476971 [Cucurbita maxima] >XP_023535795.1 uncharacterized protein LOC111797123 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 174.1 bits (440), Expect = 6.0e-40
Identity = 89/99 (89.90%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKP 60
           ME NQK+EMERE+QRREETKK+EQ+PP  ISPMQPLTESAYGGGMYGAEEGQQQ L+KKP
Sbjct: 1   METNQKVEMEREQQRREETKKLEQEPPHYISPMQPLTESAYGGGMYGAEEGQQQSLQKKP 60

Query: 61  ASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ 100
           ASDTQSADGPVE+GMKPKHAPPPSSGDRDIDITGQSYFQ
Sbjct: 61  ASDTQSADGPVESGMKPKHAPPPSSGDRDIDITGQSYFQ 99

[Close]

BLAST of Moc11g00700 vs. NCBI nr
Match: KAG6591229.1 (hypothetical protein SDJN03_13575, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024115.1 hypothetical protein SDJN02_12928, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 172.6 bits (436), Expect = 1.7e-39
Identity = 88/99 (88.89%), Postives = 94/99 (94.95%), Query Frame = 0


Query: 1   MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKP 60
           ME NQK+EMERE+QRREETKK+EQ+PP  ISPMQPLTESAYGGGMYG EEGQQQ L+KKP
Sbjct: 1   METNQKVEMEREQQRREETKKLEQEPPHYISPMQPLTESAYGGGMYGTEEGQQQSLQKKP 60

Query: 61  ASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ 100
           ASDTQSADGPVE+GMKPKHAPPPSSGDRDIDITGQSYFQ
Sbjct: 61  ASDTQSADGPVESGMKPKHAPPPSSGDRDIDITGQSYFQ 99

[Close]

BLAST of Moc11g00700 vs. NCBI nr
Match: XP_038899828.1 (uncharacterized protein LOC120087055 [Benincasa hispida])

HSP 1 Score: 161.8 bits (408), Expect = 3.1e-36
Identity = 83/99 (83.84%), Postives = 92/99 (92.93%), Query Frame = 0


Query: 1   MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKP 60
           ME NQK+EMERE+QRREE+KKMEQQPP  ISPM+PLTESAYGGGMYG EEG+++ L+KKP
Sbjct: 1   MESNQKMEMEREQQRREESKKMEQQPPHYISPMKPLTESAYGGGMYGGEEGEERSLQKKP 60

Query: 61  ASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ 100
           AS+TQSADGPVE  MKPKHAPPPSSGDRDIDITGQSYFQ
Sbjct: 61  ASETQSADGPVEREMKPKHAPPPSSGDRDIDITGQSYFQ 99

[Close]

BLAST of Moc11g00700 vs. NCBI nr
Match: XP_008452943.1 (PREDICTED: uncharacterized protein LOC103493802 [Cucumis melo])

HSP 1 Score: 147.1 bits (370), Expect = 7.9e-32
Identity = 80/101 (79.21%), Postives = 87/101 (86.14%), Query Frame = 0


Query: 1   MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLL--KK 60
           ME  Q+IEMERE+QRRE++KK+EQ+PP  ISPMQPLTESAYGGGMYG EEG Q+ L  KK
Sbjct: 1   MENKQRIEMEREQQRREQSKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQESLQMKK 60

Query: 61  KPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ 100
            PAS TQSADGPVEA MK KH PPPSSGDRDIDITGQSYFQ
Sbjct: 61  VPASQTQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101

[Close]

BLAST of Moc11g00700 vs. ExPASy TrEMBL
Match: A0A6J1BT98 (uncharacterized protein LOC111005558 OS=Momordica charantia OX=3673 GN=LOC111005558 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.9e-45
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKP 60
           MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKP
Sbjct: 1   MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKP 60

Query: 61  ASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ 100
           ASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ
Sbjct: 61  ASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ 99

[Close]

BLAST of Moc11g00700 vs. ExPASy TrEMBL
Match: A0A6J1IJZ9 (uncharacterized protein LOC111476971 OS=Cucurbita maxima OX=3661 GN=LOC111476971 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.9e-40
Identity = 89/99 (89.90%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKP 60
           ME NQK+EMERE+QRREETKK+EQ+PP  ISPMQPLTESAYGGGMYGAEEGQQQ L+KKP
Sbjct: 1   METNQKVEMEREQQRREETKKLEQEPPHYISPMQPLTESAYGGGMYGAEEGQQQSLQKKP 60

Query: 61  ASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ 100
           ASDTQSADGPVE+GMKPKHAPPPSSGDRDIDITGQSYFQ
Sbjct: 61  ASDTQSADGPVESGMKPKHAPPPSSGDRDIDITGQSYFQ 99

[Close]

BLAST of Moc11g00700 vs. ExPASy TrEMBL
Match: A0A6J1FEB2 (uncharacterized protein LOC111443294 OS=Cucurbita moschata OX=3662 GN=LOC111443294 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.9e-40
Identity = 89/99 (89.90%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKP 60
           ME NQK+EMERE+QRREETKK+EQ+PP  ISPMQPLTESAYGGGMYGAEEGQQQ L+KKP
Sbjct: 1   METNQKVEMEREQQRREETKKLEQEPPHYISPMQPLTESAYGGGMYGAEEGQQQSLQKKP 60

Query: 61  ASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ 100
           ASDTQSADGPVE+GMKPKHAPPPSSGDRDIDITGQSYFQ
Sbjct: 61  ASDTQSADGPVESGMKPKHAPPPSSGDRDIDITGQSYFQ 99

[Close]

BLAST of Moc11g00700 vs. ExPASy TrEMBL
Match: A0A1S3BV26 (uncharacterized protein LOC103493802 OS=Cucumis melo OX=3656 GN=LOC103493802 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.8e-32
Identity = 80/101 (79.21%), Postives = 87/101 (86.14%), Query Frame = 0


Query: 1   MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLL--KK 60
           ME  Q+IEMERE+QRRE++KK+EQ+PP  ISPMQPLTESAYGGGMYG EEG Q+ L  KK
Sbjct: 1   MENKQRIEMEREQQRREQSKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQESLQMKK 60

Query: 61  KPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ 100
            PAS TQSADGPVEA MK KH PPPSSGDRDIDITGQSYFQ
Sbjct: 61  VPASQTQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101

[Close]

BLAST of Moc11g00700 vs. ExPASy TrEMBL
Match: A0A0A0L393 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G658490 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 5.7e-28
Identity = 77/102 (75.49%), Postives = 83/102 (81.37%), Query Frame = 0


Query: 1   MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEE-GQQQLL--K 60
           ME  QKIEMERE+QRREE+KK+EQ+PP  IS MQPLTE AYGGGMYG ++ G Q  L  K
Sbjct: 1   MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIK 60

Query: 61  KKPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ 100
           K PAS TQSADGPV A MK KH PPPSSGDRDIDITGQSYFQ
Sbjct: 61  KVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSYFQ 102

[Close]

BLAST of Moc11g00700 vs. TAIR 10
Match: AT5G42290.1 (transcription activator-related )

HSP 1 Score: 75.5 bits (184), Expect = 2.7e-14
Identity = 53/113 (46.90%), Postives = 66/113 (58.41%), Query Frame = 0


Query: 5   QKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAE--------------- 64
           +K   +  E+ R++ +  + QPP  IS MQP+T  AYGGG+YG +               
Sbjct: 2   EKEPKQEPEEGRDKYEPHQHQPPY-ISQMQPVTHEAYGGGLYGQDDEKETTNLEKEAKNI 61

Query: 65  --EGQQQLLKKKPASDTQSADGPVEA-GMKPKHAPPPSSGDRDIDITGQSYFQ 100
             E QQQ   + PASDTQSADGP E   + PKH  P SSGDRD+DITGQSY Q
Sbjct: 62  EKEPQQQ---RPPASDTQSADGPDEVKTLTPKHKQPASSGDRDVDITGQSYIQ 110

The following BLAST results are available for this feature:

BLAST of Moc11g00700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132786.1	8.1e-45	100.00	uncharacterized protein LOC111005558 [Momordica charantia]	[more]
XP_022936823.1	6.0e-40	89.90	uncharacterized protein LOC111443294 [Cucurbita moschata] >XP_022976625.1 unchar...	[more]
KAG6591229.1	1.7e-39	88.89	hypothetical protein SDJN03_13575, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038899828.1	3.1e-36	83.84	uncharacterized protein LOC120087055 [Benincasa hispida]	[more]
XP_008452943.1	7.9e-32	79.21	PREDICTED: uncharacterized protein LOC103493802 [Cucumis melo]	[more]

BLAST of Moc11g00700 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g00700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BT98	3.9e-45	100.00	uncharacterized protein LOC111005558 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1IJZ9	2.9e-40	89.90	uncharacterized protein LOC111476971 OS=Cucurbita maxima OX=3661 GN=LOC111476971...	[more]
A0A6J1FEB2	2.9e-40	89.90	uncharacterized protein LOC111443294 OS=Cucurbita moschata OX=3662 GN=LOC1114432...	[more]
A0A1S3BV26	3.8e-32	79.21	uncharacterized protein LOC103493802 OS=Cucumis melo OX=3656 GN=LOC103493802 PE=...	[more]
A0A0A0L393	5.7e-28	75.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G658490 PE=4 SV=1	[more]

BLAST of Moc11g00700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42290.1	2.7e-14	46.90	transcription activator-related	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 2..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g00700.1	Moc11g00700.1	mRNA