Moc10g29890 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g29890
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	F-box protein
Location	chr10: 22574906 .. 22576430 (-)
RNA-Seq Expression	Moc10g29890
Synteny	Moc10g29890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAGGTGTTTTCGAATGATAGGGATTCGAAGAAATTGAAGAGGAGGAGACGATCGAAGGGCTCTGGTGGGAAGTATCTGAAGCCTGGTGCTCTAGCGCAGCTGCGGTGTAGCAAGGGCTCGGTTGCTAAATCTTGTACTGATCTTGGGAGGAAGAGGGTCGCTGTGTTGGATACTGGGAAGACGAAGAGAAATGCGGTGCCTGAGGATAAAGTTTCTGATAAAAGTCCTATGATGTTGTCGCCTGTGAAATTGGTGATGCATATAAATCATATTGGAACTCCAAGAACTCCTCGGGTTGAAGCCTGTGAATCAGAGTCGCGGCTGGAATCTTTACCTATGGATCTACTGGTACTATTACCATACATCTTATTCTTTTATGCTCCCCTGTAGTAAACATGTTTATCTTAAAGCTACCTCAAATGCATAAAATTTAACATTTTCTTTTCAGGACCAATTGTAATGATTTTCTTTAAGCCATGAAGGAGGCCTGCTTATTTTAGAGAACCCCTATGCTAGGCTATTTTTTTGATCTGTCACTAATGAATTACTTGTTTATTTATTGAGTGGTGTCATTATTTATTTGGCACTTTAGTTGTTTTGTTTTAGTGTCTAGCCTAGCGGCCATTTCTTATCTTGAAGAGAAGAGCCGATATAAATTTATTCTAAATTATAAAAATCGAGCCGCATCTTTCTAAATTATAAACTTAGAAATCCCGTCTTTTTTTTTTTAATTTTTAATTTTATTGTAAACGCACAGGAATCTGATGATCTGGACATGTGCTGTTATATTTGTATTTGTACTCTTTTGCACAAGTACCCTCCTCTCATGTTATGATATTTTGCATTATCAGTGGATATTAATTAATTTTGTGCACTGTTTGGCTGCTAATCTAATATTTTCAATTCATCACTTGAAGGTGAAAATACTTTGCCATTTACACCATGACCAACTAAGGGCGGTTTTCCATGTTTCTCAACGGATCAGAAAGGCTGTAAGTAGTTGTCTATCTGTCCTTGAAATGAATCACATTTTTTGGAGGTTGATGATCCTTTTTAACCAGGTTTTGCTGGCAAGACAATTCCACTTTAATTACACAACTCCAGATCGATCCAGACAGGAGATGTTGAGAACAACCACCCCTCGACCCTCTGAACACTGGCCCTTTGTAAGGTTGGTATTTTTCATATTGATACTTACAAAATTTTCATATTTAGTATCTTTATCTGATTGATTTGGCTTCTACTAATAATCTACAGCAAGGGAGATGGCAAAGGCTTGTTGATGCCAAGCCCTCACACTCCCAAGGCACCGAGACATGGTCCTCGTCCGCCATCTCGCCTCAAAGTTTCCGAGATGAGGCAGGTTGCTGCTGTTCTCTTTCAAGAATCAGCATTTCCTCCGAGATGCATGGTTCCATCTGTTATATCCAAACCTCTCTGCAAATCCTTGGCTTCTAACCGGGTTCTGTTTTACGAGGAAGAGTTGTGCCAAGCTGTTGCTCAAAATAAACTTCTTTGA

mRNA sequence

ATGGGGAAGGTGTTTTCGAATGATAGGGATTCGAAGAAATTGAAGAGGAGGAGACGATCGAAGGGCTCTGGTGGGAAGTATCTGAAGCCTGGTGCTCTAGCGCAGCTGCGGTGTAGCAAGGGCTCGGTTGCTAAATCTTGTACTGATCTTGGGAGGAAGAGGGTCGCTGTGTTGGATACTGGGAAGACGAAGAGAAATGCGGTGCCTGAGGATAAAGTTTCTGATAAAAGTCCTATGATGTTGTCGCCTGTGAAATTGGTGATGCATATAAATCATATTGGAACTCCAAGAACTCCTCGGGTTGAAGCCTGTGAATCAGAGTCGCGGCTGGAATCTTTACCTATGGATCTACTGGTGAAAATACTTTGCCATTTACACCATGACCAACTAAGGGCGGTTTTCCATGTTTCTCAACGGATCAGAAAGGCTGTTTTGCTGGCAAGACAATTCCACTTTAATTACACAACTCCAGATCGATCCAGACAGGAGATGTTGAGAACAACCACCCCTCGACCCTCTGAACACTGGCCCTTTGTAAGCAAGGGAGATGGCAAAGGCTTGTTGATGCCAAGCCCTCACACTCCCAAGGCACCGAGACATGGTCCTCGTCCGCCATCTCGCCTCAAAGTTTCCGAGATGAGGCAGGTTGCTGCTGTTCTCTTTCAAGAATCAGCATTTCCTCCGAGATGCATGGTTCCATCTGTTATATCCAAACCTCTCTGCAAATCCTTGGCTTCTAACCGGGTTCTGTTTTACGAGGAAGAGTTGTGCCAAGCTGTTGCTCAAAATAAACTTCTTTGA

Coding sequence (CDS)

ATGGGGAAGGTGTTTTCGAATGATAGGGATTCGAAGAAATTGAAGAGGAGGAGACGATCGAAGGGCTCTGGTGGGAAGTATCTGAAGCCTGGTGCTCTAGCGCAGCTGCGGTGTAGCAAGGGCTCGGTTGCTAAATCTTGTACTGATCTTGGGAGGAAGAGGGTCGCTGTGTTGGATACTGGGAAGACGAAGAGAAATGCGGTGCCTGAGGATAAAGTTTCTGATAAAAGTCCTATGATGTTGTCGCCTGTGAAATTGGTGATGCATATAAATCATATTGGAACTCCAAGAACTCCTCGGGTTGAAGCCTGTGAATCAGAGTCGCGGCTGGAATCTTTACCTATGGATCTACTGGTGAAAATACTTTGCCATTTACACCATGACCAACTAAGGGCGGTTTTCCATGTTTCTCAACGGATCAGAAAGGCTGTTTTGCTGGCAAGACAATTCCACTTTAATTACACAACTCCAGATCGATCCAGACAGGAGATGTTGAGAACAACCACCCCTCGACCCTCTGAACACTGGCCCTTTGTAAGCAAGGGAGATGGCAAAGGCTTGTTGATGCCAAGCCCTCACACTCCCAAGGCACCGAGACATGGTCCTCGTCCGCCATCTCGCCTCAAAGTTTCCGAGATGAGGCAGGTTGCTGCTGTTCTCTTTCAAGAATCAGCATTTCCTCCGAGATGCATGGTTCCATCTGTTATATCCAAACCTCTCTGCAAATCCTTGGCTTCTAACCGGGTTCTGTTTTACGAGGAAGAGTTGTGCCAAGCTGTTGCTCAAAATAAACTTCTTTGA

Protein sequence

MGKVFSNDRDSKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDTGKTKRNAVPEDKVSDKSPMMLSPVKLVMHINHIGTPRTPRVEACESESRLESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPSEHWPFVSKGDGKGLLMPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPLCKSLASNRVLFYEEELCQAVAQNKLL

Homology

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BLAST of Moc10g29890 vs. NCBI nr
Match: XP_022145262.1 (F-box protein At4g35930 [Momordica charantia] >XP_022145263.1 F-box protein At4g35930 [Momordica charantia])

HSP 1 Score: 528.1 bits (1359), Expect = 4.4e-146
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MGKVFSNDRDSKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDT 60
           MGKVFSNDRDSKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDT
Sbjct: 1   MGKVFSNDRDSKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDT 60

Query: 61  GKTKRNAVPEDKVSDKSPMMLSPVKLVMHINHIGTPRTPRVEACESESRLESLPMDLLVK 120
           GKTKRNAVPEDKVSDKSPMMLSPVKLVMHINHIGTPRTPRVEACESESRLESLPMDLLVK
Sbjct: 61  GKTKRNAVPEDKVSDKSPMMLSPVKLVMHINHIGTPRTPRVEACESESRLESLPMDLLVK 120

Query: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPSEHWPFVS 180
           ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPSEHWPFVS
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPSEHWPFVS 180

Query: 181 KGDGKGLLMPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240
           KGDGKGLLMPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL
Sbjct: 181 KGDGKGLLMPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 241 CKSLASNRVLFYEEELCQAVAQNKLL 267
           CKSLASNRVLFYEEELCQAVAQNKLL
Sbjct: 241 CKSLASNRVLFYEEELCQAVAQNKLL 266

[Close]

BLAST of Moc10g29890 vs. NCBI nr
Match: XP_038903596.1 (F-box protein At4g35930 [Benincasa hispida])

HSP 1 Score: 497.3 bits (1279), Expect = 8.3e-137
Identity = 247/265 (93.21%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 1   MGKVFSNDRDSKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDT 60
           MGKVF++DR+ KKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLD 
Sbjct: 1   MGKVFTSDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 61  GKTKRNAVPEDKVSDKSPMMLSPVKLVMHINHIGTPRTPRVEACESESRLESLPMDLLVK 120
           GKTKRN V EDKVSD+SP+MLSPVKLVMHI+HI TPRTPRVE CESESRLESLPMDLLVK
Sbjct: 61  GKTKRNVVLEDKVSDRSPLMLSPVKLVMHISHISTPRTPRVEDCESESRLESLPMDLLVK 120

Query: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPSEHWPFVS 180
           ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRP+EHWPFV+
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVN 180

Query: 181 KGDGKGLLMPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240
           KG+GKGLL+PSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSV+SKPL
Sbjct: 181 KGEGKGLLLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVLSKPL 240

Query: 241 CKSLASNRVLFYEEELCQAVAQNKL 266
           CKSLASNRVLFYE+ELCQAVAQNKL
Sbjct: 241 CKSLASNRVLFYEDELCQAVAQNKL 265

[Close]

BLAST of Moc10g29890 vs. NCBI nr
Match: XP_004146154.1 (F-box protein At4g35930 [Cucumis sativus] >XP_031738005.1 F-box protein At4g35930 [Cucumis sativus] >KGN55645.1 hypothetical protein Csa_011427 [Cucumis sativus])

HSP 1 Score: 496.9 bits (1278), Expect = 1.1e-136
Identity = 247/265 (93.21%), Postives = 257/265 (96.98%), Query Frame = 0


Query: 1   MGKVFSNDRDSKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDT 60
           MGKVF+NDR+ KKLKRRRRSKGSGGKYLKPGALA+LRCSKGSVAKSCTDLGRKRVAVLD 
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 61  GKTKRNAVPEDKVSDKSPMMLSPVKLVMHINHIGTPRTPRVEACESESRLESLPMDLLVK 120
           GKTKRN V EDKVSD+SP+MLSPVKLVMHINHIGTP+TPRVE CESESRLESLPMDLLVK
Sbjct: 61  GKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120

Query: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPSEHWPFVS 180
           ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLR TTPRP+EHWPFV+
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180

Query: 181 KGDGKGLLMPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240
           KGDGKG  +PSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL
Sbjct: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 241 CKSLASNRVLFYEEELCQAVAQNKL 266
           CKSLASNRVLFYE+ELCQAVAQNKL
Sbjct: 241 CKSLASNRVLFYEDELCQAVAQNKL 265

[Close]

BLAST of Moc10g29890 vs. NCBI nr
Match: XP_008448525.1 (PREDICTED: F-box protein At4g35930 [Cucumis melo] >KAA0052947.1 F-box protein [Cucumis melo var. makuwa] >TYK11403.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 496.5 bits (1277), Expect = 1.4e-136
Identity = 247/265 (93.21%), Postives = 256/265 (96.60%), Query Frame = 0


Query: 1   MGKVFSNDRDSKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDT 60
           MGKVF+NDR+ KKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLD 
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 61  GKTKRNAVPEDKVSDKSPMMLSPVKLVMHINHIGTPRTPRVEACESESRLESLPMDLLVK 120
           GK KRN V EDKVSD+SP+MLSPVKLVMHINHIGTP+TPRVE CESESRLESLPMDLLVK
Sbjct: 61  GKAKRNGVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120

Query: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPSEHWPFVS 180
           ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLR TTPRP+EHWPFV+
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180

Query: 181 KGDGKGLLMPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240
           KGDGKG  +PSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL
Sbjct: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 241 CKSLASNRVLFYEEELCQAVAQNKL 266
           CKSLASNRVLFYE+ELCQAVAQNKL
Sbjct: 241 CKSLASNRVLFYEDELCQAVAQNKL 265

[Close]

BLAST of Moc10g29890 vs. NCBI nr
Match: XP_022943859.1 (F-box protein At4g35930 [Cucurbita moschata] >KAG6596254.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027800.1 F-box protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 475.7 bits (1223), Expect = 2.6e-130
Identity = 238/266 (89.47%), Postives = 252/266 (94.74%), Query Frame = 0


Query: 1   MGKVFSNDRDSKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDT 60
           MG+ FSN+R+SKKLKRRRR+KGS GKYLKPGAL++LRCSKGSV KSCT LGRKRVAVLD 
Sbjct: 8   MGEAFSNERESKKLKRRRRAKGSSGKYLKPGALSKLRCSKGSVGKSCTYLGRKRVAVLDA 67

Query: 61  GKTKR-NAVPEDKVSDKSPMMLSPVKLVMHINHIGTPRTPRVEACESESRLESLPMDLLV 120
           GKTKR NA  EDKVSD+SP+MLSPVKLVMHINHI TPRTPRVE+CESESRLESLPMDLLV
Sbjct: 68  GKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLESLPMDLLV 127

Query: 121 KILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPSEHWPFV 180
           K+LCHLHHDQLRAVFHVSQRIRKAVL+ARQFHFNYTTPDRSRQEMLRTTTPRP+EHWPFV
Sbjct: 128 KVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFV 187

Query: 181 SKGDGKGLLMPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKP 240
           SKGDGKG  +PSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQE+ FP RCMVPSVI KP
Sbjct: 188 SKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQETGFPSRCMVPSVIPKP 247

Query: 241 LCKSLASNRVLFYEEELCQAVAQNKL 266
           LCKSLASNRVLFYEEELCQAVAQNKL
Sbjct: 248 LCKSLASNRVLFYEEELCQAVAQNKL 273

[Close]

BLAST of Moc10g29890 vs. ExPASy Swiss-Prot
Match: Q5XF11 (F-box protein At4g35930 OS=Arabidopsis thaliana OX=3702 GN=At4g35930 PE=2 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 3.1e-78
Identity = 170/321 (52.96%), Postives = 204/321 (63.55%), Query Frame = 0


Query: 1   MGKVFSNDRDSKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDT 60
           MGKV   D DSK   R+++ K S  KYLKPGAL QL  SK S AKSC +LG+KRV V DT
Sbjct: 1   MGKVSPKDLDSKTSVRKKKLKSSSNKYLKPGALVQLCYSKASAAKSCNELGKKRVPVFDT 60

Query: 61  ------GKTK---------RN-------------------------------------AV 120
                 GK +         RN                                      V
Sbjct: 61  KSCNDLGKKRVPVFDIKHARNNKMAVEQLNSPKSPLMLSPVNVVKRSTLVRPMKFDDLQV 120

Query: 121 PEDKVSDKSPMMLSPVKLVMHINHIGTPRTPRVEACESESRLESLPMDLLVKILCHLHHD 180
             +    KSP+MLSP+ +VM    + TP+TP+ + C SES+LESLPMDLLVKI+CHLHHD
Sbjct: 121 ESNNTCKKSPLMLSPMGIVMQNTLLRTPKTPQADPCVSESQLESLPMDLLVKIVCHLHHD 180

Query: 181 QLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPSEHWPFVSKGDGKGLL 240
           QL+AVFHVSQRIR A +LARQ+HFNYTTPDRSRQEMLR  TP P   WPF  +GDG   +
Sbjct: 181 QLKAVFHVSQRIRMATILARQYHFNYTTPDRSRQEMLRVMTPVPINRWPF-RRGDGNPTM 240

Query: 241 MPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQ-ESAFPPRCMVPSVISKP-LCKSLAS 266
           + SPHTPKAP+H PRPPSR K++EM+Q+ AVLFQ ++ FP RC+VPSV+ +P L K +A 
Sbjct: 241 VSSPHTPKAPKHAPRPPSRTKLAEMKQITAVLFQDQTPFPSRCIVPSVLQRPTLFKPMAP 300

[Close]

BLAST of Moc10g29890 vs. ExPASy Swiss-Prot
Match: O65416 (F-box protein SKIP27 OS=Arabidopsis thaliana OX=3702 GN=SKIP27 PE=1 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 1.8e-09
Identity = 44/133 (33.08%), Postives = 72/133 (54.14%), Query Frame = 0


Query: 31  GALAQLRCSKGSVAKSCTDLGRKRVAVLDTGK--TKRNAVPEDKVSDKSPMMLSPVKLVM 90
           G   +L    GSV +    LGRKR+ +    +    R+AV    VS+  P+  S  +   
Sbjct: 51  GEEEELELGLGSV-RFTRGLGRKRILISSCVRESLSRSAVEIPVVSESPPVKSSLKRQRS 110

Query: 91  HINHIGTPRTPRVEACESESRLESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLAR 150
            I  + +       +   +SRLE LP DLL++++C + H+ L+++  VS+ IR+A L+A+
Sbjct: 111 RITIVSS-------SSSEKSRLECLPQDLLIRVICGVDHEDLKSLKLVSKSIREASLVAK 170

Query: 151 QFHFNYTTPDRSR 162
             HF YTTP ++R
Sbjct: 171 TLHFAYTTPKKTR 175

[Close]

BLAST of Moc10g29890 vs. ExPASy Swiss-Prot
Match: Q8GX77 (F-box protein At1g61340 OS=Arabidopsis thaliana OX=3702 GN=At1g61340 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.1e-09
Identity = 28/57 (49.12%), Postives = 45/57 (78.95%), Query Frame = 0


Query: 105 ESESR-LESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRS 161
           E +SR LE LP+D+LV+I+C + H+ L+ +FHVS+ IR+A ++A+Q HF Y+TP ++
Sbjct: 75  EGQSRELEDLPLDILVRIICGVEHEDLKQLFHVSKTIREATMIAKQSHFAYSTPRKT 131

[Close]

BLAST of Moc10g29890 vs. ExPASy Swiss-Prot
Match: Q9S9T6 (F-box protein At4g05010 OS=Arabidopsis thaliana OX=3702 GN=At4g05010 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.7e-07
Identity = 28/64 (43.75%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 97  RTPRVEACES-ESRLESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYT 156
           + P  E  ES  S LE+L  D+L+++LCH+ H+ L  +  VS+ IRKAV+ A++ HF+Y+
Sbjct: 50  KRPSHETTESCRSLLETLHQDILIRVLCHVDHEDLATLKRVSKTIRKAVIEAKKSHFDYS 109

Query: 157 TPDR 160
           TP +
Sbjct: 110 TPKK 113

[Close]

BLAST of Moc10g29890 vs. ExPASy TrEMBL
Match: A0A6J1CW37 (F-box protein At4g35930 OS=Momordica charantia OX=3673 GN=LOC111014758 PE=4 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 2.1e-146
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MGKVFSNDRDSKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDT 60
           MGKVFSNDRDSKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDT
Sbjct: 1   MGKVFSNDRDSKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDT 60

Query: 61  GKTKRNAVPEDKVSDKSPMMLSPVKLVMHINHIGTPRTPRVEACESESRLESLPMDLLVK 120
           GKTKRNAVPEDKVSDKSPMMLSPVKLVMHINHIGTPRTPRVEACESESRLESLPMDLLVK
Sbjct: 61  GKTKRNAVPEDKVSDKSPMMLSPVKLVMHINHIGTPRTPRVEACESESRLESLPMDLLVK 120

Query: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPSEHWPFVS 180
           ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPSEHWPFVS
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPSEHWPFVS 180

Query: 181 KGDGKGLLMPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240
           KGDGKGLLMPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL
Sbjct: 181 KGDGKGLLMPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 241 CKSLASNRVLFYEEELCQAVAQNKLL 267
           CKSLASNRVLFYEEELCQAVAQNKLL
Sbjct: 241 CKSLASNRVLFYEEELCQAVAQNKLL 266

[Close]

BLAST of Moc10g29890 vs. ExPASy TrEMBL
Match: A0A0A0L111 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002650 PE=4 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 5.3e-137
Identity = 247/265 (93.21%), Postives = 257/265 (96.98%), Query Frame = 0


Query: 1   MGKVFSNDRDSKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDT 60
           MGKVF+NDR+ KKLKRRRRSKGSGGKYLKPGALA+LRCSKGSVAKSCTDLGRKRVAVLD 
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 61  GKTKRNAVPEDKVSDKSPMMLSPVKLVMHINHIGTPRTPRVEACESESRLESLPMDLLVK 120
           GKTKRN V EDKVSD+SP+MLSPVKLVMHINHIGTP+TPRVE CESESRLESLPMDLLVK
Sbjct: 61  GKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120

Query: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPSEHWPFVS 180
           ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLR TTPRP+EHWPFV+
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180

Query: 181 KGDGKGLLMPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240
           KGDGKG  +PSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL
Sbjct: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 241 CKSLASNRVLFYEEELCQAVAQNKL 266
           CKSLASNRVLFYE+ELCQAVAQNKL
Sbjct: 241 CKSLASNRVLFYEDELCQAVAQNKL 265

[Close]

BLAST of Moc10g29890 vs. ExPASy TrEMBL
Match: A0A5A7UEK6 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00560 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 6.9e-137
Identity = 247/265 (93.21%), Postives = 256/265 (96.60%), Query Frame = 0


Query: 1   MGKVFSNDRDSKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDT 60
           MGKVF+NDR+ KKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLD 
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 61  GKTKRNAVPEDKVSDKSPMMLSPVKLVMHINHIGTPRTPRVEACESESRLESLPMDLLVK 120
           GK KRN V EDKVSD+SP+MLSPVKLVMHINHIGTP+TPRVE CESESRLESLPMDLLVK
Sbjct: 61  GKAKRNGVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120

Query: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPSEHWPFVS 180
           ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLR TTPRP+EHWPFV+
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180

Query: 181 KGDGKGLLMPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240
           KGDGKG  +PSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL
Sbjct: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 241 CKSLASNRVLFYEEELCQAVAQNKL 266
           CKSLASNRVLFYE+ELCQAVAQNKL
Sbjct: 241 CKSLASNRVLFYEDELCQAVAQNKL 265

[Close]

BLAST of Moc10g29890 vs. ExPASy TrEMBL
Match: A0A1S3BKS0 (F-box protein At4g35930 OS=Cucumis melo OX=3656 GN=LOC103490677 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 6.9e-137
Identity = 247/265 (93.21%), Postives = 256/265 (96.60%), Query Frame = 0


Query: 1   MGKVFSNDRDSKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDT 60
           MGKVF+NDR+ KKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLD 
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 61  GKTKRNAVPEDKVSDKSPMMLSPVKLVMHINHIGTPRTPRVEACESESRLESLPMDLLVK 120
           GK KRN V EDKVSD+SP+MLSPVKLVMHINHIGTP+TPRVE CESESRLESLPMDLLVK
Sbjct: 61  GKAKRNGVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120

Query: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPSEHWPFVS 180
           ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLR TTPRP+EHWPFV+
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180

Query: 181 KGDGKGLLMPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240
           KGDGKG  +PSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL
Sbjct: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 241 CKSLASNRVLFYEEELCQAVAQNKL 266
           CKSLASNRVLFYE+ELCQAVAQNKL
Sbjct: 241 CKSLASNRVLFYEDELCQAVAQNKL 265

[Close]

BLAST of Moc10g29890 vs. ExPASy TrEMBL
Match: A0A6J1FVG9 (F-box protein At4g35930 OS=Cucurbita moschata OX=3662 GN=LOC111448461 PE=4 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 1.3e-130
Identity = 238/266 (89.47%), Postives = 252/266 (94.74%), Query Frame = 0


Query: 1   MGKVFSNDRDSKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDT 60
           MG+ FSN+R+SKKLKRRRR+KGS GKYLKPGAL++LRCSKGSV KSCT LGRKRVAVLD 
Sbjct: 8   MGEAFSNERESKKLKRRRRAKGSSGKYLKPGALSKLRCSKGSVGKSCTYLGRKRVAVLDA 67

Query: 61  GKTKR-NAVPEDKVSDKSPMMLSPVKLVMHINHIGTPRTPRVEACESESRLESLPMDLLV 120
           GKTKR NA  EDKVSD+SP+MLSPVKLVMHINHI TPRTPRVE+CESESRLESLPMDLLV
Sbjct: 68  GKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLESLPMDLLV 127

Query: 121 KILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPSEHWPFV 180
           K+LCHLHHDQLRAVFHVSQRIRKAVL+ARQFHFNYTTPDRSRQEMLRTTTPRP+EHWPFV
Sbjct: 128 KVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFV 187

Query: 181 SKGDGKGLLMPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKP 240
           SKGDGKG  +PSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQE+ FP RCMVPSVI KP
Sbjct: 188 SKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQETGFPSRCMVPSVIPKP 247

Query: 241 LCKSLASNRVLFYEEELCQAVAQNKL 266
           LCKSLASNRVLFYEEELCQAVAQNKL
Sbjct: 248 LCKSLASNRVLFYEEELCQAVAQNKL 273

[Close]

BLAST of Moc10g29890 vs. TAIR 10
Match: AT4G35930.1 (F-box family protein )

HSP 1 Score: 293.1 bits (749), Expect = 2.2e-79
Identity = 170/321 (52.96%), Postives = 204/321 (63.55%), Query Frame = 0


Query: 1   MGKVFSNDRDSKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDT 60
           MGKV   D DSK   R+++ K S  KYLKPGAL QL  SK S AKSC +LG+KRV V DT
Sbjct: 1   MGKVSPKDLDSKTSVRKKKLKSSSNKYLKPGALVQLCYSKASAAKSCNELGKKRVPVFDT 60

Query: 61  ------GKTK---------RN-------------------------------------AV 120
                 GK +         RN                                      V
Sbjct: 61  KSCNDLGKKRVPVFDIKHARNNKMAVEQLNSPKSPLMLSPVNVVKRSTLVRPMKFDDLQV 120

Query: 121 PEDKVSDKSPMMLSPVKLVMHINHIGTPRTPRVEACESESRLESLPMDLLVKILCHLHHD 180
             +    KSP+MLSP+ +VM    + TP+TP+ + C SES+LESLPMDLLVKI+CHLHHD
Sbjct: 121 ESNNTCKKSPLMLSPMGIVMQNTLLRTPKTPQADPCVSESQLESLPMDLLVKIVCHLHHD 180

Query: 181 QLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPSEHWPFVSKGDGKGLL 240
           QL+AVFHVSQRIR A +LARQ+HFNYTTPDRSRQEMLR  TP P   WPF  +GDG   +
Sbjct: 181 QLKAVFHVSQRIRMATILARQYHFNYTTPDRSRQEMLRVMTPVPINRWPF-RRGDGNPTM 240

Query: 241 MPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQ-ESAFPPRCMVPSVISKP-LCKSLAS 266
           + SPHTPKAP+H PRPPSR K++EM+Q+ AVLFQ ++ FP RC+VPSV+ +P L K +A 
Sbjct: 241 VSSPHTPKAPKHAPRPPSRTKLAEMKQITAVLFQDQTPFPSRCIVPSVLQRPTLFKPMAP 300

[Close]

BLAST of Moc10g29890 vs. TAIR 10
Match: AT4G21510.1 (F-box family protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.3e-10
Identity = 44/133 (33.08%), Postives = 72/133 (54.14%), Query Frame = 0


Query: 31  GALAQLRCSKGSVAKSCTDLGRKRVAVLDTGK--TKRNAVPEDKVSDKSPMMLSPVKLVM 90
           G   +L    GSV +    LGRKR+ +    +    R+AV    VS+  P+  S  +   
Sbjct: 51  GEEEELELGLGSV-RFTRGLGRKRILISSCVRESLSRSAVEIPVVSESPPVKSSLKRQRS 110

Query: 91  HINHIGTPRTPRVEACESESRLESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLAR 150
            I  + +       +   +SRLE LP DLL++++C + H+ L+++  VS+ IR+A L+A+
Sbjct: 111 RITIVSS-------SSSEKSRLECLPQDLLIRVICGVDHEDLKSLKLVSKSIREASLVAK 170

Query: 151 QFHFNYTTPDRSR 162
             HF YTTP ++R
Sbjct: 171 TLHFAYTTPKKTR 175

[Close]

BLAST of Moc10g29890 vs. TAIR 10
Match: AT1G61340.1 (F-box family protein )

HSP 1 Score: 63.9 bits (154), Expect = 2.2e-10
Identity = 28/57 (49.12%), Postives = 45/57 (78.95%), Query Frame = 0


Query: 105 ESESR-LESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRS 161
           E +SR LE LP+D+LV+I+C + H+ L+ +FHVS+ IR+A ++A+Q HF Y+TP ++
Sbjct: 75  EGQSRELEDLPLDILVRIICGVEHEDLKQLFHVSKTIREATMIAKQSHFAYSTPRKT 131

[Close]

BLAST of Moc10g29890 vs. TAIR 10
Match: AT4G05010.1 (F-box family protein )

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-08
Identity = 28/64 (43.75%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 97  RTPRVEACES-ESRLESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYT 156
           + P  E  ES  S LE+L  D+L+++LCH+ H+ L  +  VS+ IRKAV+ A++ HF+Y+
Sbjct: 50  KRPSHETTESCRSLLETLHQDILIRVLCHVDHEDLATLKRVSKTIRKAVIEAKKSHFDYS 109

Query: 157 TPDR 160
           TP +
Sbjct: 110 TPKK 113

[Close]

BLAST of Moc10g29890 vs. TAIR 10
Match: AT1G61340.2 (F-box family protein )

HSP 1 Score: 49.7 bits (117), Expect = 4.3e-06
Identity = 19/44 (43.18%), Postives = 35/44 (79.55%), Query Frame = 0


Query: 117 LLVKILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRS 161
           ++V+I+C + H+ L+ +FHVS+ IR+A ++A+Q HF Y+TP ++
Sbjct: 134 VIVRIICGVEHEDLKQLFHVSKTIREATMIAKQSHFAYSTPRKT 177

The following BLAST results are available for this feature:

BLAST of Moc10g29890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145262.1	4.4e-146	100.00	F-box protein At4g35930 [Momordica charantia] >XP_022145263.1 F-box protein At4g...	[more]
XP_038903596.1	8.3e-137	93.21	F-box protein At4g35930 [Benincasa hispida]	[more]
XP_004146154.1	1.1e-136	93.21	F-box protein At4g35930 [Cucumis sativus] >XP_031738005.1 F-box protein At4g3593...	[more]
XP_008448525.1	1.4e-136	93.21	PREDICTED: F-box protein At4g35930 [Cucumis melo] >KAA0052947.1 F-box protein [C...	[more]
XP_022943859.1	2.6e-130	89.47	F-box protein At4g35930 [Cucurbita moschata] >KAG6596254.1 F-box protein, partia...	[more]

BLAST of Moc10g29890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5XF11	3.1e-78	52.96	F-box protein At4g35930 OS=Arabidopsis thaliana OX=3702 GN=At4g35930 PE=2 SV=1	[more]
O65416	1.8e-09	33.08	F-box protein SKIP27 OS=Arabidopsis thaliana OX=3702 GN=SKIP27 PE=1 SV=2	[more]
Q8GX77	3.1e-09	49.12	F-box protein At1g61340 OS=Arabidopsis thaliana OX=3702 GN=At1g61340 PE=2 SV=1	[more]
Q9S9T6	1.7e-07	43.75	F-box protein At4g05010 OS=Arabidopsis thaliana OX=3702 GN=At4g05010 PE=2 SV=1	[more]

BLAST of Moc10g29890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CW37	2.1e-146	100.00	F-box protein At4g35930 OS=Momordica charantia OX=3673 GN=LOC111014758 PE=4 SV=1	[more]
A0A0A0L111	5.3e-137	93.21	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002650 PE=4 ...	[more]
A0A5A7UEK6	6.9e-137	93.21	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00560 ...	[more]
A0A1S3BKS0	6.9e-137	93.21	F-box protein At4g35930 OS=Cucumis melo OX=3656 GN=LOC103490677 PE=4 SV=1	[more]
A0A6J1FVG9	1.3e-130	89.47	F-box protein At4g35930 OS=Cucurbita moschata OX=3662 GN=LOC111448461 PE=4 SV=1	[more]

BLAST of Moc10g29890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35930.1	2.2e-79	52.96	F-box family protein	[more]
AT4G21510.1	1.3e-10	33.08	F-box family protein	[more]
AT1G61340.1	2.2e-10	49.12	F-box family protein	[more]
AT4G05010.1	1.2e-08	43.75	F-box family protein	[more]
AT1G61340.2	4.3e-06	43.18	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR34049	F-BOX PROTEIN SKIP27	coord: 1..266
None	No IPR available	PANTHER	PTHR34049:SF2	F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 1..266
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 107..155 score: 9.02057
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 100..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g29890.1	Moc10g29890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding