Moc10g26150 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g26150
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Retrotran_gag_3 domain-containing protein
Location	chr10: 19074457 .. 19075130 (+)
RNA-Seq Expression	Moc10g26150
Synteny	Moc10g26150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCCTTTGTATTGAGAATGATCTAAATTCGCCCATCTTCCTTCTCTCTAATATCTGTAATTTGATCTCGATTCGGCTCGATTCCACCAATTTCATCTTATGGAAATTTCAGCTTACAGCCATATTAAAGGCTCATAAGCTCTTTAGTTTTATTGACGGTTCTTCGACACCGCCAGAGAAATTTGTTGCTGCTTCTACTCTTGAATCGTCTTCTTCTATTGATTCGGCTTCTCAGATGATTCCGAATACTACATATGCTGATTGGATTGCTCGAGATCAAGCGTTGATGACACTGATAAACGCTACACTACTAGCCTATCTCGTCAGAAGTACTTCGTCCAAGCAGATTTGGGAGACCTTGAAGAAGCACTATTCTTCCAATTCTCATACTATTGTGGTAAATCTGAAGTCCGATCTTCAGTCCATAACCAAAAATCCAGGTGAGTCAATTGACGATTATGTGAAACGAATCAAGGAAGTTAAAGATAAGCTCATCAATGTATCTGTTACTGTTGACAATGAAGACCTGTTGATTTATGCTCTAAATGGTCTACCTGTTGAAATATAATGTTTTTCGAACATCGATGTTCACTTGTTCTCAGTCCATCACTTTTGATGAACTCCATGTGCTCAGGAAATCCGAGGAGATTGTCTTGGAGAAACAGATGA

mRNA sequence

ATGGCTTCCCTTTGTATTGAGAATGATCTAAATTCGCCCATCTTCCTTCTCTCTAATATCTGTAATTTGATCTCGATTCGGCTCGATTCCACCAATTTCATCTTATGGAAATTTCAGCTTACAGCCATATTAAAGGCTCATAAGCTCTTTAGTTTTATTGACGGTTCTTCGACACCGCCAGAGAAATTTGTTGCTGCTTCTACTCTTGAATCGTCTTCTTCTATTGATTCGGCTTCTCAGATGATTCCGAATACTACATATGCTGATTGGATTGCTCGAGATCAAGCGTTGATGACACTGATAAACGCTACACTACTAGCCTATCTCGTCAGAAGTACTTCGTCCAAGCAGATTTGGGAGACCTTGAAGAAGCACTATTCTTCCAATTCTCATACTATTGTGGTAAATCTGAAGTCCGATCTTCAGTCCATAACCAAAAATCCAGGAAATCCGAGGAGATTGTCTTGGAGAAACAGATGA

Coding sequence (CDS)

ATGGCTTCCCTTTGTATTGAGAATGATCTAAATTCGCCCATCTTCCTTCTCTCTAATATCTGTAATTTGATCTCGATTCGGCTCGATTCCACCAATTTCATCTTATGGAAATTTCAGCTTACAGCCATATTAAAGGCTCATAAGCTCTTTAGTTTTATTGACGGTTCTTCGACACCGCCAGAGAAATTTGTTGCTGCTTCTACTCTTGAATCGTCTTCTTCTATTGATTCGGCTTCTCAGATGATTCCGAATACTACATATGCTGATTGGATTGCTCGAGATCAAGCGTTGATGACACTGATAAACGCTACACTACTAGCCTATCTCGTCAGAAGTACTTCGTCCAAGCAGATTTGGGAGACCTTGAAGAAGCACTATTCTTCCAATTCTCATACTATTGTGGTAAATCTGAAGTCCGATCTTCAGTCCATAACCAAAAATCCAGGAAATCCGAGGAGATTGTCTTGGAGAAACAGATGA

Protein sequence

MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPPEKFVAASTLESSSSIDSASQMIPNTTYADWIARDQALMTLINATLLAYLVRSTSSKQIWETLKKHYSSNSHTIVVNLKSDLQSITKNPGNPRRLSWRNR

Homology

[Close]

BLAST of Moc10g26150 vs. NCBI nr
Match: XP_022152753.1 (uncharacterized protein LOC111020396 isoform X3 [Momordica charantia])

HSP 1 Score: 303.1 bits (775), Expect = 1.4e-78
Identity = 158/159 (99.37%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 1   MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPP 60
           MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPP
Sbjct: 1   MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPP 60

Query: 61  EKFVAASTLESSSSIDSASQMIPNTTYADWIARDQALMTLINATLLAYLVRSTSSKQIWE 120
           EKFVAASTLESSSSIDSASQMIPNTTYADWIARDQALMTLINATLLAYLVRSTSSKQIWE
Sbjct: 61  EKFVAASTLESSSSIDSASQMIPNTTYADWIARDQALMTLINATLLAYLVRSTSSKQIWE 120

Query: 121 TLKKHYSSNSHTIVVNLKSDLQSITKNPGNPRRLSWRNR 160
           TLKKHYSSNSHTIVVNLKSDLQSITK PGNPRRLSWRNR
Sbjct: 121 TLKKHYSSNSHTIVVNLKSDLQSITKXPGNPRRLSWRNR 159

[Close]

BLAST of Moc10g26150 vs. NCBI nr
Match: XP_022152751.1 (uncharacterized protein LOC111020396 isoform X1 [Momordica charantia])

HSP 1 Score: 282.0 bits (720), Expect = 3.3e-72
Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPP 60
           MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPP
Sbjct: 1   MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPP 60

Query: 61  EKFVAASTLESSSSIDSASQMIPNTTYADWIARDQALMTLINATLLAYLVRSTSSKQIWE 120
           EKFVAASTLESSSSIDSASQMIPNTTYADWIARDQALMTLINATLLAYLVRSTSSKQIWE
Sbjct: 61  EKFVAASTLESSSSIDSASQMIPNTTYADWIARDQALMTLINATLLAYLVRSTSSKQIWE 120

Query: 121 TLKKHYSSNSHTIVVNLKSDLQSITKNPG 150
           TLKKHYSSNSHTIVVNLKSDLQSITK PG
Sbjct: 121 TLKKHYSSNSHTIVVNLKSDLQSITKXPG 149

[Close]

BLAST of Moc10g26150 vs. NCBI nr
Match: XP_022152754.1 (uncharacterized protein LOC111020396 isoform X4 [Momordica charantia])

HSP 1 Score: 279.6 bits (714), Expect = 1.6e-71
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPP 60
           MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPP
Sbjct: 1   MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPP 60

Query: 61  EKFVAASTLESSSSIDSASQMIPNTTYADWIARDQALMTLINATLLAYLVRSTSSKQIWE 120
           EKFVAASTLESSSSIDSASQMIPNTTYADWIARDQALMTLINATLLAYLVRSTSSKQIWE
Sbjct: 61  EKFVAASTLESSSSIDSASQMIPNTTYADWIARDQALMTLINATLLAYLVRSTSSKQIWE 120

Query: 121 TLKKHYSSNSHTIVVNLKSDLQSITKNP 149
           TLKKHYSSNSHTIVVNLKSDLQSITK P
Sbjct: 121 TLKKHYSSNSHTIVVNLKSDLQSITKXP 148

[Close]

BLAST of Moc10g26150 vs. NCBI nr
Match: XP_022152752.1 (uncharacterized protein LOC111020396 isoform X2 [Momordica charantia])

HSP 1 Score: 279.6 bits (714), Expect = 1.6e-71
Identity = 147/150 (98.00%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPP 60
           MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPP
Sbjct: 1   MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPP 60

Query: 61  EKFVAASTLESSSSIDSASQMIPNTTYADWIARDQALMTLINATLLAYLVRSTSSKQIWE 120
           EKFVAASTLESSSSIDSASQMIPNTTYADWIARDQALMTLINATLLAYLVRSTSSKQIWE
Sbjct: 61  EKFVAASTLESSSSIDSASQMIPNTTYADWIARDQALMTLINATLLAYLVRSTSSKQIWE 120

Query: 121 TLKKHYSSNSHTIVVNLKSDLQSITKNPGN 151
           TLKKHYSSNSHTIVVNLKSDLQSITK P +
Sbjct: 121 TLKKHYSSNSHTIVVNLKSDLQSITKXPAS 150

[Close]

BLAST of Moc10g26150 vs. NCBI nr
Match: XP_022150845.1 (uncharacterized protein LOC111018892 [Momordica charantia])

HSP 1 Score: 183.7 bits (465), Expect = 1.2e-42
Identity = 99/144 (68.75%), Postives = 116/144 (80.56%), Query Frame = 0


Query: 7   ENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPPEKFVAA 66
           + DL+SPIFLLSNICNL+SIRLDST+FILWKFQLTAILKAHKLF FIDGS + P +F+A+
Sbjct: 30  KKDLHSPIFLLSNICNLVSIRLDSTDFILWKFQLTAILKAHKLFGFIDGSVSAPSQFLAS 89

Query: 67  STLESSSSIDSASQMIPNTTYADWIARDQALMTLINATL----LAYLVRSTSSKQIWETL 126
           S+   S    + S  + N  + DWIA+DQALMTLINATL    LAY+VRS +SKQ+WE L
Sbjct: 90  SSETESQPTTTTSLPVINPHFEDWIAKDQALMTLINATLSAEALAYVVRSGTSKQVWEVL 149

Query: 127 KKHYSSNSHTIVVNLKSDLQSITK 147
           +KHYSSNS T VVNLKSDLQSI K
Sbjct: 150 EKHYSSNSRTNVVNLKSDLQSIVK 173

[Close]

BLAST of Moc10g26150 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.4e-09
Identity = 46/150 (30.67%), Postives = 83/150 (55.33%), Query Frame = 0


Query: 1   MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPP 60
           MA+   E  LN+   L  N+ N+   +L STN+++W  Q+ A+   ++L  F+DGS+T P
Sbjct: 1   MAAHAEELVLNNTSILNVNMSNV--TKLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMP 60

Query: 61  EKFVAASTLESSSSIDSASQMIPNTTYADWIARDQ----ALMTLINATLLAYLVRSTSSK 120
              +           D+A ++ P+  Y  W  +D+    A++  I+ ++   + R+T++ 
Sbjct: 61  PATIGT---------DAAPRVNPD--YTRWKRQDKLIYSAVLGAISMSVQPAVSRATTAA 120

Query: 121 QIWETLKKHYSSNSHTIVVNLKSDLQSITK 147
           QIWETL+K Y++ S+  V  L++ L+  TK
Sbjct: 121 QIWETLRKIYANPSYGHVTQLRTQLKQWTK 137

[Close]

BLAST of Moc10g26150 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.6e-06
Identity = 33/116 (28.45%), Postives = 64/116 (55.17%), Query Frame = 0


Query: 27  RLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPPEKFVAASTLESSSSIDSASQMIPNTT 86
           +L STN+++W  Q+ A+   ++L  F+DGS+  P   +           D+  ++ P+  
Sbjct: 25  KLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGT---------DAVPRVNPD-- 84

Query: 87  YADWIARDQ----ALMTLINATLLAYLVRSTSSKQIWETLKKHYSSNSHTIVVNLK 139
           Y  W  +D+    A++  I+ ++   + R+T++ QIWETL+K Y++ S+  V  L+
Sbjct: 85  YTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLR 129

[Close]

BLAST of Moc10g26150 vs. ExPASy TrEMBL
Match: A0A6J1DFQ7 (uncharacterized protein LOC111020396 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111020396 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 6.7e-79
Identity = 158/159 (99.37%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 1   MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPP 60
           MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPP
Sbjct: 1   MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPP 60

Query: 61  EKFVAASTLESSSSIDSASQMIPNTTYADWIARDQALMTLINATLLAYLVRSTSSKQIWE 120
           EKFVAASTLESSSSIDSASQMIPNTTYADWIARDQALMTLINATLLAYLVRSTSSKQIWE
Sbjct: 61  EKFVAASTLESSSSIDSASQMIPNTTYADWIARDQALMTLINATLLAYLVRSTSSKQIWE 120

Query: 121 TLKKHYSSNSHTIVVNLKSDLQSITKNPGNPRRLSWRNR 160
           TLKKHYSSNSHTIVVNLKSDLQSITK PGNPRRLSWRNR
Sbjct: 121 TLKKHYSSNSHTIVVNLKSDLQSITKXPGNPRRLSWRNR 159

[Close]

BLAST of Moc10g26150 vs. ExPASy TrEMBL
Match: A0A6J1DIP4 (uncharacterized protein LOC111020396 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020396 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.6e-72
Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPP 60
           MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPP
Sbjct: 1   MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPP 60

Query: 61  EKFVAASTLESSSSIDSASQMIPNTTYADWIARDQALMTLINATLLAYLVRSTSSKQIWE 120
           EKFVAASTLESSSSIDSASQMIPNTTYADWIARDQALMTLINATLLAYLVRSTSSKQIWE
Sbjct: 61  EKFVAASTLESSSSIDSASQMIPNTTYADWIARDQALMTLINATLLAYLVRSTSSKQIWE 120

Query: 121 TLKKHYSSNSHTIVVNLKSDLQSITKNPG 150
           TLKKHYSSNSHTIVVNLKSDLQSITK PG
Sbjct: 121 TLKKHYSSNSHTIVVNLKSDLQSITKXPG 149

[Close]

BLAST of Moc10g26150 vs. ExPASy TrEMBL
Match: A0A6J1DGZ1 (uncharacterized protein LOC111020396 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111020396 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 7.9e-72
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPP 60
           MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPP
Sbjct: 1   MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPP 60

Query: 61  EKFVAASTLESSSSIDSASQMIPNTTYADWIARDQALMTLINATLLAYLVRSTSSKQIWE 120
           EKFVAASTLESSSSIDSASQMIPNTTYADWIARDQALMTLINATLLAYLVRSTSSKQIWE
Sbjct: 61  EKFVAASTLESSSSIDSASQMIPNTTYADWIARDQALMTLINATLLAYLVRSTSSKQIWE 120

Query: 121 TLKKHYSSNSHTIVVNLKSDLQSITKNP 149
           TLKKHYSSNSHTIVVNLKSDLQSITK P
Sbjct: 121 TLKKHYSSNSHTIVVNLKSDLQSITKXP 148

[Close]

BLAST of Moc10g26150 vs. ExPASy TrEMBL
Match: A0A6J1DH48 (uncharacterized protein LOC111020396 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111020396 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 7.9e-72
Identity = 147/150 (98.00%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPP 60
           MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPP
Sbjct: 1   MASLCIENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPP 60

Query: 61  EKFVAASTLESSSSIDSASQMIPNTTYADWIARDQALMTLINATLLAYLVRSTSSKQIWE 120
           EKFVAASTLESSSSIDSASQMIPNTTYADWIARDQALMTLINATLLAYLVRSTSSKQIWE
Sbjct: 61  EKFVAASTLESSSSIDSASQMIPNTTYADWIARDQALMTLINATLLAYLVRSTSSKQIWE 120

Query: 121 TLKKHYSSNSHTIVVNLKSDLQSITKNPGN 151
           TLKKHYSSNSHTIVVNLKSDLQSITK P +
Sbjct: 121 TLKKHYSSNSHTIVVNLKSDLQSITKXPAS 150

[Close]

BLAST of Moc10g26150 vs. ExPASy TrEMBL
Match: A0A6J1D9L6 (uncharacterized protein LOC111018892 OS=Momordica charantia OX=3673 GN=LOC111018892 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 5.9e-43
Identity = 99/144 (68.75%), Postives = 116/144 (80.56%), Query Frame = 0


Query: 7   ENDLNSPIFLLSNICNLISIRLDSTNFILWKFQLTAILKAHKLFSFIDGSSTPPEKFVAA 66
           + DL+SPIFLLSNICNL+SIRLDST+FILWKFQLTAILKAHKLF FIDGS + P +F+A+
Sbjct: 30  KKDLHSPIFLLSNICNLVSIRLDSTDFILWKFQLTAILKAHKLFGFIDGSVSAPSQFLAS 89

Query: 67  STLESSSSIDSASQMIPNTTYADWIARDQALMTLINATL----LAYLVRSTSSKQIWETL 126
           S+   S    + S  + N  + DWIA+DQALMTLINATL    LAY+VRS +SKQ+WE L
Sbjct: 90  SSETESQPTTTTSLPVINPHFEDWIAKDQALMTLINATLSAEALAYVVRSGTSKQVWEVL 149

Query: 127 KKHYSSNSHTIVVNLKSDLQSITK 147
           +KHYSSNS T VVNLKSDLQSI K
Sbjct: 150 EKHYSSNSRTNVVNLKSDLQSIVK 173

The following BLAST results are available for this feature:

BLAST of Moc10g26150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152753.1	1.4e-78	99.37	uncharacterized protein LOC111020396 isoform X3 [Momordica charantia]	[more]
XP_022152751.1	3.3e-72	99.33	uncharacterized protein LOC111020396 isoform X1 [Momordica charantia]	[more]
XP_022152754.1	1.6e-71	99.32	uncharacterized protein LOC111020396 isoform X4 [Momordica charantia]	[more]
XP_022152752.1	1.6e-71	98.00	uncharacterized protein LOC111020396 isoform X2 [Momordica charantia]	[more]
XP_022150845.1	1.2e-42	68.75	uncharacterized protein LOC111018892 [Momordica charantia]	[more]

BLAST of Moc10g26150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	5.4e-09	30.67	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	5.6e-06	28.45	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]

BLAST of Moc10g26150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DFQ7	6.7e-79	99.37	uncharacterized protein LOC111020396 isoform X3 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DIP4	1.6e-72	99.33	uncharacterized protein LOC111020396 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DGZ1	7.9e-72	99.32	uncharacterized protein LOC111020396 isoform X4 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DH48	7.9e-72	98.00	uncharacterized protein LOC111020396 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1D9L6	5.9e-43	68.75	uncharacterized protein LOC111018892 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of Moc10g26150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029472	Retrotransposon Copia-like, N-terminal	PFAM	PF14244	Retrotran_gag_3	coord: 22..60 e-value: 1.3E-8 score: 34.4
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 96..149 e-value: 2.7E-6 score: 27.2
None	No IPR available	PANTHER	PTHR47481:SF3	GAG-POLYPEPTIDE OF LTR COPIA-TYPE-RELATED	coord: 17..147
None	No IPR available	PANTHER	PTHR47481	FAMILY NOT NAMED	coord: 17..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g26150.1	Moc10g26150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding