Moc10g23700 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g23700
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	nuclear transcription factor Y subunit B-9
Location	chr10: 17030765 .. 17035691 (+)
RNA-Seq Expression	Moc10g23700
Synteny	Moc10g23700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGATCGCCAACGTGATACGCATCATGCGGCGGATCTTACCCTCCCATGCAAAGATATCCGACGATGCCAAGGAGACCATCCAAGAGTGTGTGTCGGAGTACATTAGCTTCATCACCGGCGAGGCCAACGAGCGGTGCCAGCGAGAGCAGCGCAAGACGGTGACGGCGGAGGACGTCCTTTGGGCCATGGGGAAGCTTGGCTTCGACGACTACATCGAGCCACTCACCGTGTTCCTCAACCGCTACCGGGAGTCAGAGAGCGATCGAATCCGAACGGAGCCAATCTTGAGGCGCAGTATGGATTATGGGCCGCAAGTGGGGATGCTACCGCCGTACGGGCAGGCGTTTCAAATAGGGCACGTGCCAGCGGGGATGTTCGATGCAATGGGCGGGTACTATAGTGGTGGCGGTGGCGGTAGTGGTGGTGGAGGCGGAAGTGGAGGCGGGAGCGGCGGGTCGAGCTCTGGGAACGGTAGCCAGCTTTGATATGAGTTGGAAGTAGGGTTACTAATTTGAAAGCAAAGCTATATATAATGAATAAATATCAAAAGCAACAAGTGATTATAACCCATTTGTTCTAGTTTGATGACGGTGGTGGTGGTGGCTGCTTATGGTTTGTGGCTGAGGATCTTTGTCTTTGCTAACTTTTCTCACTTTTCAAATTTTGTTATTCCAAAAAACTCTCTTGCATGATTTCAGAACATGTACTTGCTCTTTTTAACCCAGAAATAACCAGATTTGATTTTTGATCTGTAATGAAAATAAAGAAACGCACATATAAATGGTGGATTCGAGTACTCGATAGGTCCCGACGATTACCCAAGGCCAATGTTTTAAAAGAATTTTGAGGCTTGTGTGAGTATTGAAGTTTGATATGTTTTAAAGGACTTTTGTGGCCCATGTCAGTATTGAAGTTTGAAGCTTGTCTCTTGAGATGAGGATGTGTTTGGAGATGTTGATGTTTATACGAAGATTTTGTTTCTTGTTTTTTCACTTCTAGTTTTATAACAAATCTAAACATTCGACAACTATTTATGGTCTTGTTTCTCATTTTTAGAAATATTTTCAAAATTGTATATAAATTTTAGAAATGACAAAAGTAAGGGTTCGTTTGGTAACGTTCTCGTTTCTTGTTTCTGTTTCTTTATTTTTAATGAAGATAAATGTATTGCATGGTTCCAACCTCTAAGAATTGAGGTACGATAAAGCAAATTTTTTTTTATTTATGTTTTAGAACAAATTGAAAATAGGAACAAGAAAGGATAAAGTAGTTTTGGTTGTTTACAAAATTTCTATACAATTGTGAGAATGTTCCCAAAAAATAAGAAACAAGAAACAAAGTTAGTTGAAAAATACTTAGATTTCTTAAGAAAATTAGAAACGAGAAACAAGAAACGAGAATGTTACCAAACGAGCCCTAAGTTTTTCCTGTTTCTGGTTCTCATTTCCAAATTATTTGTTCCCACGTAAATAAAAATCTTGTTTTATCATTGTTGTGCAAAATACACCAATAACCATTATTTCTTATAATTGACAATATTAATCAATCATCCAAATAATCTACCAAGCAATATTAAGAAGACGACTACACAATTTATAATGGTTCCACCAGTGTGGTCTATATCCACTATGCAAGGTGAGGGCAAACTTATATTAGCTTCAATATCCTCAACAATATAAACGGAAGGAGGGAGAATAATCAAACTCAAATTCTCAGGCAGAAAAATAACCCAACGAAGAAGATGAAGATAACGGTACGAAAAATACAAGGAGAAAGAAACCAACTTTTAAACTCCTTGTTCCGAACGCTTCAAAGAGAAGCTTGCAAAATCCCAAAATTATTCCTCTCACCTTCGACTGCTGTCCCCAAATTGTGCAACAAAATTCTGCTCCTCTTTGTTATCAATCTCACCGTACAAAAACAAGGGTTTTAAAAGTAGTTAAAACTACACATGGCTTCACTCACAATTAAACCCAGCCACATGTGGCTTTACACAAATAAGCCCACCCAAAGAACGGAGTAATGTACTTGAGTCACAAACAACAACAATTGCATCCATGAATGTTAGGGTCCTAGAATTCAATTTTTCTTTATTAAAAAAAGAACGAAATAGGAACAAGAAACGAAAACGTTACCAAATAAACTTTTAATATCTTAAGATGATTGTTGTTATCTTATTTTAGTAGAATCATTTGTATTTGTGTTTTAGATTTGTGCATAGAAATTAAATGGTTTTAATAAAATAATTGAAATTAATGGTTTAATAAAATAATTGTGGGTTTTAGATTAAAAAAACAAAGAAGTTTTCATGTTCAATGACCCCATATTAATCTAAAATTTTGTATTAGGTTATTTTAAAGTAAATAAGTAATATATATTATACTGATTGATCGATTGTTTTTTTTGAAGCAAACGTAGCTCAATATAATTGAATGCATCTTGGCTAGATCCAAAGGGAGATTGAATGCATCTTGATAAATGACCATGCATCTTGATAAATGACCACTGGTACTTATAAAGAAAAAAACAACTAAATTAATATAAATAGTTAAATGTCAACATGAGCTTAGCTCAACTGATTAAGACAAGTATGATCGATCAAAAGGTCGTGTGCTCAAACTCTCATTCTCAAATTTATATTTAAAAAAGAAACTTTGCATTGGGGTTTTTGATTTTAACGGTCGTCACTACGGGTTTGCGACACAAAACGACCGACTTTATTCTCGAGAGGAGAAAAATAGAGTCACCACCCGTCTTTATTTATAGGGTGTGACTTGCAACCCAAATGTATGGATAAGTTGATAGACATAAAAAGATATGAGTCGAGGGTCTTTTGCGTATGGGAAGGTATTAGCACCTCACAAAACTTGTTAACGATATTTTGTTTTCTCATATTATTTTTAAAAAAATGTCTTTCAAAAAATAAAATTTTGTTTCTATTTTCAAATGTTTCATGTTTTATTGATATGTAAATAATGAGCTATGAGTGATTTAGAGCCATTAAAAAAATTTAATTATTTGAATTTAATTTGCGCTCCCAAAATAGATTCCTACCTAGCCTCCTGAATTCTCATTTCTGTCATATGATTTTCTTTTAAATATTAAAGAAAAAGGTTTGGTCGGTTAAATTTGCCTTTTAAAAATTTAAACTTTTTGCTTGTGATAAAATGTCTTTCTATAGAAATGTAATTTTTCCTAAAAGACTTAGTTTTTAAAATTTCTTCGCAAGAGAAATTCTTTTTTGAAGAAAAGATATTTATTTGCTAAGATAATTTTTGTTACGGCAAAGATGCACACAATTTTATAATAATATTTTAATTACTTTTTCAAAACCAAACATGGAGATAAATGAAGTAAGACTAGAAAATACACAATTCTAGGAAACATACTAAAATTCAAATCTTAGTCTACGAGATATTGATTTTTCCCTCAAGAATCTAAGAATATCACGCTCCCAAATATTTCAAGGTTCTATCGTCAGGAAGCTTCCTTTTGGAAAATTAAGTTAAAAATCTTTGATAATATTGAGATACTTATAAATGAATTAAATTTACTGAATCCATCAACTTAAACCATTGGGTTGAGTGATGGTTTATTCATCATTAACAGATAAAAATGTAAAAATCTCCACCAAACAATATCACAATGAAATTGACATAATATATACACATTTGTCAAAGATTATGTGTATAATATAGATAAGTATGTTAGAAATTAAATCAATCAAAATATCATGTTACAAGAAACAATAATATAAAATTAACAATGAGAATTGTTTGAGGATAAAAATATCGTGGACACGTGGAGGACGTTCAGTGGTGTTTAGAAATAAAGAATATTCCATGTCCACTTCGAAACCTGCAGAGGAGACCAATTTGTCCATATGCAAGGCTGAGTGTAAAGGCCAGGGTTCGATCTGAATGGGTTCGATCTGCTCAACCCCGACAGGTTCGACATGACAAAAGACAGGGATAATCGCCGGTCGTGAGTGCTGTCGGACCCACTACCTATAAATAGAGGGTCTCATCTCACGCTCAAGTATCGAATCTCACCTCGAACTTAATATTGAGTCCGACCTATACTGACTTGATCGTCGGAGAGTTTGCCCTCTTGTGCAGGTTCACTCCACGGTTCAGGTCGAGCCGGAGACCGGGTTCGAGCTAGGTTCGTAAACACCGTTGTGCAAATTTTTTCATAAACATTTGGCGCCGTCTGTGGGAAAGGACAATTTAAGTCATCCCGATCTAAGAAACATAAACAAAGATGGTTCAACCAGCAAACTCAACCAACAGAGCAGATCGAAGAGCTCTGGCTGCTAACGATGGCCTCTAGAGAGAGGTCGAGGCGGAAGTGGCAGAGGATCAAGTTCAGGAAGGCCTAGGGACCGAATAGCTCCGCAGGTCGGCACGCATCACCACACTTGTTCTGCCACCAGCACATCATAAACCGACTAAGGCCAATCGTGGCCGAGGTGGTGCCTCCAGGAGAACCACTCGAGCTCCATCTCTAGCTCCTACTAAGGAGAATTTTGATGTCCTCCATAAAGAAATGGAGGCAATGCACACCCAGATGCGCACCATGGAAGAGATGTATAATGAAATGGTGCAGGCTTTTGGTGTCAGGTCTCGATTAGAAGACCAAGTGGTGCACGAAGAAGTGCACAAGCAAGAGGATCTCCACCTCAACCAATCAACGAAGAGTACCCTAGAGGCGATGAAAATGTGGAGTACAGTCGCCAGAAGAACGATTCGTGACCATCTTAACAGAAAGAGAAGCTCGTCCCACCGAGGAGGACGAACTCCAACATGCTCGCACAAGAACTCCAACCAGCAGGCCGAATCCTCTTATAACCTAATAGTTCCTGAGGGAATTATTACGAGGGAGGAGTTCGACCAGCTCAAGAGCAAATTTGATGCAAGTTGA

mRNA sequence

ATGCCGATCGCCAACGTGATACGCATCATGCGGCGGATCTTACCCTCCCATGCAAAGATATCCGACGATGCCAAGGAGACCATCCAAGAGTGTGTGTCGGAGTACATTAGCTTCATCACCGGCGAGGCCAACGAGCGGTGCCAGCGAGAGCAGCGCAAGACGGTGACGGCGGAGGACGTCCTTTGGGCCATGGGGAAGCTTGGCTTCGACGACTACATCGAGCCACTCACCGTGTTCCTCAACCGCTACCGGGAGTCAGAGAGCGATCGAATCCGAACGGAGCCAATCTTGAGGCGCAGTATGGATTATGGGCCGCAAGTGGGGATGCTACCGCCGTACGGGCAGGCGTTTCAAATAGGGCACGTGCCAGCGGGGATGTTCGATGCAATGGGCGGGTCGGCACGCATCACCACACTTGTTCTGCCACCAGCACATCATAAACCGACTAAGGCCAATCGTGGCCGAGGTGGTGCCTCCAGGAGAACCACTCGAGCTCCATCTCTAGCTCCTACTAAGGAGAATTTTGATGTCCTCCATAAAGAAATGGAGGCAATGCACACCCAGATGCGCACCATGGAAGAGATGTATAATGAAATGGTGCAGGCTTTTGGTGTCAGGTCTCGATTAGAAGACCAAGTGGTGCACGAAGAAGTGCACAAGCAAGAGGATCTCCACCTCAACCAATCAACGAAGAGTACCCTAGAGGCGATGAAAATGTGGAGTACAGTCGCCAGAAGAACGATTCGTGACCATCTTAACAGAAAGAGAAGCTCGTCCCACCGAGGAGGACGAACTCCAACATGCTCGCACAAGAACTCCAACCAGCAGGCCGAATCCTCTTATAACCTAATAGTTCCTGAGGGAATTATTACGAGGGAGGAGTTCGACCAGCTCAAGAGCAAATTTGATGCAAGTTGA

Coding sequence (CDS)

ATGCCGATCGCCAACGTGATACGCATCATGCGGCGGATCTTACCCTCCCATGCAAAGATATCCGACGATGCCAAGGAGACCATCCAAGAGTGTGTGTCGGAGTACATTAGCTTCATCACCGGCGAGGCCAACGAGCGGTGCCAGCGAGAGCAGCGCAAGACGGTGACGGCGGAGGACGTCCTTTGGGCCATGGGGAAGCTTGGCTTCGACGACTACATCGAGCCACTCACCGTGTTCCTCAACCGCTACCGGGAGTCAGAGAGCGATCGAATCCGAACGGAGCCAATCTTGAGGCGCAGTATGGATTATGGGCCGCAAGTGGGGATGCTACCGCCGTACGGGCAGGCGTTTCAAATAGGGCACGTGCCAGCGGGGATGTTCGATGCAATGGGCGGGTCGGCACGCATCACCACACTTGTTCTGCCACCAGCACATCATAAACCGACTAAGGCCAATCGTGGCCGAGGTGGTGCCTCCAGGAGAACCACTCGAGCTCCATCTCTAGCTCCTACTAAGGAGAATTTTGATGTCCTCCATAAAGAAATGGAGGCAATGCACACCCAGATGCGCACCATGGAAGAGATGTATAATGAAATGGTGCAGGCTTTTGGTGTCAGGTCTCGATTAGAAGACCAAGTGGTGCACGAAGAAGTGCACAAGCAAGAGGATCTCCACCTCAACCAATCAACGAAGAGTACCCTAGAGGCGATGAAAATGTGGAGTACAGTCGCCAGAAGAACGATTCGTGACCATCTTAACAGAAAGAGAAGCTCGTCCCACCGAGGAGGACGAACTCCAACATGCTCGCACAAGAACTCCAACCAGCAGGCCGAATCCTCTTATAACCTAATAGTTCCTGAGGGAATTATTACGAGGGAGGAGTTCGACCAGCTCAAGAGCAAATTTGATGCAAGTTGA

Protein sequence

MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRSMDYGPQVGMLPPYGQAFQIGHVPAGMFDAMGGSARITTLVLPPAHHKPTKANRGRGGASRRTTRAPSLAPTKENFDVLHKEMEAMHTQMRTMEEMYNEMVQAFGVRSRLEDQVVHEEVHKQEDLHLNQSTKSTLEAMKMWSTVARRTIRDHLNRKRSSSHRGGRTPTCSHKNSNQQAESSYNLIVPEGIITREEFDQLKSKFDAS

Homology

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BLAST of Moc10g23700 vs. NCBI nr
Match: XP_038905819.1 (nuclear transcription factor Y subunit B-9-like [Benincasa hispida])

HSP 1 Score: 267.3 bits (682), Expect = 1.6e-67
Identity = 129/132 (97.73%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 60
           MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV
Sbjct: 89  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 148

Query: 61  LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRSMDYGPQVGMLPPYGQAFQIG 120
           LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRR++DYGPQVGM+PPYGQAFQIG
Sbjct: 149 LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMMPPYGQAFQIG 208

Query: 121 HVPAGMFDAMGG 133
           HVPAGMFDAMGG
Sbjct: 209 HVPAGMFDAMGG 220

[Close]

BLAST of Moc10g23700 vs. NCBI nr
Match: TYK13777.1 (nuclear transcription factor Y subunit B-9 [Cucumis melo var. makuwa])

HSP 1 Score: 264.2 bits (674), Expect = 1.4e-66
Identity = 128/132 (96.97%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 60
           MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV
Sbjct: 61  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 120

Query: 61  LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRSMDYGPQVGMLPPYGQAFQIG 120
           LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRR++DYGPQVGM+ PYGQAFQIG
Sbjct: 121 LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMISPYGQAFQIG 180

Query: 121 HVPAGMFDAMGG 133
           HVPAGMFDAMGG
Sbjct: 181 HVPAGMFDAMGG 192

[Close]

BLAST of Moc10g23700 vs. NCBI nr
Match: XP_008449191.1 (PREDICTED: nuclear transcription factor Y subunit B-9 [Cucumis melo])

HSP 1 Score: 264.2 bits (674), Expect = 1.4e-66
Identity = 128/132 (96.97%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 60
           MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV
Sbjct: 61  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 120

Query: 61  LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRSMDYGPQVGMLPPYGQAFQIG 120
           LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRR++DYGPQVGM+ PYGQAFQIG
Sbjct: 121 LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMISPYGQAFQIG 180

Query: 121 HVPAGMFDAMGG 133
           HVPAGMFDAMGG
Sbjct: 181 HVPAGMFDAMGG 192

[Close]

BLAST of Moc10g23700 vs. NCBI nr
Match: KAA0065753.1 (nuclear transcription factor Y subunit B-9 [Cucumis melo var. makuwa])

HSP 1 Score: 264.2 bits (674), Expect = 1.4e-66
Identity = 128/132 (96.97%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 60
           MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV
Sbjct: 61  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 120

Query: 61  LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRSMDYGPQVGMLPPYGQAFQIG 120
           LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRR++DYGPQVGM+ PYGQAFQIG
Sbjct: 121 LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMISPYGQAFQIG 180

Query: 121 HVPAGMFDAMGG 133
           HVPAGMFDAMGG
Sbjct: 181 HVPAGMFDAMGG 192

[Close]

BLAST of Moc10g23700 vs. NCBI nr
Match: XP_031738736.1 (nuclear transcription factor Y subunit B-9-like [Cucumis sativus])

HSP 1 Score: 264.2 bits (674), Expect = 1.4e-66
Identity = 128/132 (96.97%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 60
           MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV
Sbjct: 61  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 120

Query: 61  LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRSMDYGPQVGMLPPYGQAFQIG 120
           LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRR++DYGPQVGM+ PYGQAFQIG
Sbjct: 121 LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMISPYGQAFQIG 180

Query: 121 HVPAGMFDAMGG 133
           HVPAGMFDAMGG
Sbjct: 181 HVPAGMFDAMGG 192

[Close]

BLAST of Moc10g23700 vs. ExPASy Swiss-Prot
Match: Q9SFD8 (Nuclear transcription factor Y subunit B-9 OS=Arabidopsis thaliana OX=3702 GN=NFYB9 PE=1 SV=2)

HSP 1 Score: 174.9 bits (442), Expect = 1.4e-42
Identity = 94/149 (63.09%), Postives = 111/149 (74.50%), Query Frame = 0


Query: 1   MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 60
           MPIANVIRIMR+ LPSHAKISDDAKETIQECVSEYISF+TGEANERCQREQRKT+TAED+
Sbjct: 64  MPIANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKTITAEDI 123

Query: 61  LWAMGKLGFDDYIEPLTVFLNRYRESESDR---IRTE-PILRRSMD------YGPQVGML 120
           LWAM KLGFD+Y++PLTVF+NRYRE E+DR   +R E P LR++        +GP  G+ 
Sbjct: 124 LWAMSKLGFDNYVDPLTVFINRYREIETDRGSALRGEPPSLRQTYGGNGIGFHGPSHGLP 183

Query: 121 PP----YGQAFQIGHVPAGMFDAMGGSAR 136
           PP    YG   Q   +  G +   G S +
Sbjct: 184 PPGPYGYGMLDQSMVMGGGRYYQNGSSGQ 212

[Close]

BLAST of Moc10g23700 vs. ExPASy Swiss-Prot
Match: Q84W66 (Nuclear transcription factor Y subunit B-6 OS=Arabidopsis thaliana OX=3702 GN=NFYB6 PE=1 SV=2)

HSP 1 Score: 168.7 bits (426), Expect = 1.0e-40
Identity = 80/90 (88.89%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1   MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 60
           MPIANVIRIMRRILP+HAKISDD+KETIQECVSEYISFITGEANERCQREQRKT+TAEDV
Sbjct: 63  MPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANERCQREQRKTITAEDV 122

Query: 61  LWAMGKLGFDDYIEPLTVFLNRYRESESDR 91
           LWAM KLGFDDYIEPLT++L+RYRE E +R
Sbjct: 123 LWAMSKLGFDDYIEPLTLYLHRYRELEGER 152

[Close]

BLAST of Moc10g23700 vs. ExPASy Swiss-Prot
Match: O23310 (Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NFYB3 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 9.6e-31
Identity = 60/93 (64.52%), Postives = 80/93 (86.02%), Query Frame = 0


Query: 1   MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 60
           +PIANV RIM++ LP++AKIS DAKET+QECVSE+ISFITGEA+++CQRE+RKT+  +D+
Sbjct: 26  LPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDL 85

Query: 61  LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRT 94
           LWAM  LGF+DY+EPL V+L +YRE E ++  T
Sbjct: 86  LWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTT 118

[Close]

BLAST of Moc10g23700 vs. ExPASy Swiss-Prot
Match: Q9FGJ3 (Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NFYB2 PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 6.2e-30
Identity = 58/90 (64.44%), Postives = 79/90 (87.78%), Query Frame = 0


Query: 1   MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 60
           +PIANV RIM++ LP++AKIS DAKET+QECVSE+ISF+TGEA+++CQ+E+RKT+  +D+
Sbjct: 32  LPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKTINGDDL 91

Query: 61  LWAMGKLGFDDYIEPLTVFLNRYRESESDR 91
           LWAM  LGF+DY+EPL V+L R+RE E +R
Sbjct: 92  LWAMTTLGFEDYVEPLKVYLQRFREIEGER 121

[Close]

BLAST of Moc10g23700 vs. ExPASy Swiss-Prot
Match: Q69J40 (Nuclear transcription factor Y subunit B-10 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB10 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 8.1e-30
Identity = 58/90 (64.44%), Postives = 80/90 (88.89%), Query Frame = 0


Query: 1   MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 60
           +PIANV RIM+R LP++AKIS DAKET+QECVSE+ISFITGEA+++CQRE+RKT+  +D+
Sbjct: 27  LPIANVSRIMKRALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDL 86

Query: 61  LWAMGKLGFDDYIEPLTVFLNRYRESESDR 91
           LWAM  LGF+DYI+PL ++L+++RE E ++
Sbjct: 87  LWAMTTLGFEDYIDPLKLYLHKFRELEGEK 116

[Close]

BLAST of Moc10g23700 vs. ExPASy TrEMBL
Match: A0A5D3CPF3 (Nuclear transcription factor Y subunit B-9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00390 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 6.6e-67
Identity = 128/132 (96.97%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 60
           MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV
Sbjct: 61  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 120

Query: 61  LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRSMDYGPQVGMLPPYGQAFQIG 120
           LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRR++DYGPQVGM+ PYGQAFQIG
Sbjct: 121 LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMISPYGQAFQIG 180

Query: 121 HVPAGMFDAMGG 133
           HVPAGMFDAMGG
Sbjct: 181 HVPAGMFDAMGG 192

[Close]

BLAST of Moc10g23700 vs. ExPASy TrEMBL
Match: A0A5A7VC19 (Nuclear transcription factor Y subunit B-9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00440 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 6.6e-67
Identity = 128/132 (96.97%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 60
           MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV
Sbjct: 61  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 120

Query: 61  LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRSMDYGPQVGMLPPYGQAFQIG 120
           LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRR++DYGPQVGM+ PYGQAFQIG
Sbjct: 121 LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMISPYGQAFQIG 180

Query: 121 HVPAGMFDAMGG 133
           HVPAGMFDAMGG
Sbjct: 181 HVPAGMFDAMGG 192

[Close]

BLAST of Moc10g23700 vs. ExPASy TrEMBL
Match: A0A1S3BKV5 (nuclear transcription factor Y subunit B-9 OS=Cucumis melo OX=3656 GN=LOC103491142 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 6.6e-67
Identity = 128/132 (96.97%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 60
           MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV
Sbjct: 61  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 120

Query: 61  LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRSMDYGPQVGMLPPYGQAFQIG 120
           LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRR++DYGPQVGM+ PYGQAFQIG
Sbjct: 121 LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMISPYGQAFQIG 180

Query: 121 HVPAGMFDAMGG 133
           HVPAGMFDAMGG
Sbjct: 181 HVPAGMFDAMGG 192

[Close]

BLAST of Moc10g23700 vs. ExPASy TrEMBL
Match: A0A6J1KV71 (nuclear transcription factor Y subunit B-9-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498480 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 4.3e-66
Identity = 126/132 (95.45%), Postives = 129/132 (97.73%), Query Frame = 0


Query: 1   MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 60
           MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV
Sbjct: 98  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 157

Query: 61  LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRSMDYGPQVGMLPPYGQAFQIG 120
           LWAMGKLGFDDYIEPLTVFLNRYRE ESDRIRTEPILRR++DYGPQVGM+PPYGQ FQIG
Sbjct: 158 LWAMGKLGFDDYIEPLTVFLNRYRELESDRIRTEPILRRNVDYGPQVGMVPPYGQTFQIG 217

Query: 121 HVPAGMFDAMGG 133
           HVP GMFDAMGG
Sbjct: 218 HVPTGMFDAMGG 229

[Close]

BLAST of Moc10g23700 vs. ExPASy TrEMBL
Match: A0A6J1KTC3 (nuclear transcription factor Y subunit B-3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498480 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 4.3e-66
Identity = 126/132 (95.45%), Postives = 129/132 (97.73%), Query Frame = 0


Query: 1   MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 60
           MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV
Sbjct: 85  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 144

Query: 61  LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRSMDYGPQVGMLPPYGQAFQIG 120
           LWAMGKLGFDDYIEPLTVFLNRYRE ESDRIRTEPILRR++DYGPQVGM+PPYGQ FQIG
Sbjct: 145 LWAMGKLGFDDYIEPLTVFLNRYRELESDRIRTEPILRRNVDYGPQVGMVPPYGQTFQIG 204

Query: 121 HVPAGMFDAMGG 133
           HVP GMFDAMGG
Sbjct: 205 HVPTGMFDAMGG 216

[Close]

BLAST of Moc10g23700 vs. TAIR 10
Match: AT1G21970.1 (Histone superfamily protein )

HSP 1 Score: 174.9 bits (442), Expect = 1.0e-43
Identity = 94/149 (63.09%), Postives = 111/149 (74.50%), Query Frame = 0


Query: 1   MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 60
           MPIANVIRIMR+ LPSHAKISDDAKETIQECVSEYISF+TGEANERCQREQRKT+TAED+
Sbjct: 64  MPIANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKTITAEDI 123

Query: 61  LWAMGKLGFDDYIEPLTVFLNRYRESESDR---IRTE-PILRRSMD------YGPQVGML 120
           LWAM KLGFD+Y++PLTVF+NRYRE E+DR   +R E P LR++        +GP  G+ 
Sbjct: 124 LWAMSKLGFDNYVDPLTVFINRYREIETDRGSALRGEPPSLRQTYGGNGIGFHGPSHGLP 183

Query: 121 PP----YGQAFQIGHVPAGMFDAMGGSAR 136
           PP    YG   Q   +  G +   G S +
Sbjct: 184 PPGPYGYGMLDQSMVMGGGRYYQNGSSGQ 212

[Close]

BLAST of Moc10g23700 vs. TAIR 10
Match: AT5G47670.1 (nuclear factor Y, subunit B6 )

HSP 1 Score: 168.7 bits (426), Expect = 7.3e-42
Identity = 80/90 (88.89%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1   MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 60
           MPIANVIRIMRRILP+HAKISDD+KETIQECVSEYISFITGEANERCQREQRKT+TAEDV
Sbjct: 63  MPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANERCQREQRKTITAEDV 122

Query: 61  LWAMGKLGFDDYIEPLTVFLNRYRESESDR 91
           LWAM KLGFDDYIEPLT++L+RYRE E +R
Sbjct: 123 LWAMSKLGFDDYIEPLTLYLHRYRELEGER 152

[Close]

BLAST of Moc10g23700 vs. TAIR 10
Match: AT5G47670.2 (nuclear factor Y, subunit B6 )

HSP 1 Score: 168.7 bits (426), Expect = 7.3e-42
Identity = 80/90 (88.89%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1   MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 60
           MPIANVIRIMRRILP+HAKISDD+KETIQECVSEYISFITGEANERCQREQRKT+TAEDV
Sbjct: 34  MPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANERCQREQRKTITAEDV 93

Query: 61  LWAMGKLGFDDYIEPLTVFLNRYRESESDR 91
           LWAM KLGFDDYIEPLT++L+RYRE E +R
Sbjct: 94  LWAMSKLGFDDYIEPLTLYLHRYRELEGER 123

[Close]

BLAST of Moc10g23700 vs. TAIR 10
Match: AT4G14540.1 (nuclear factor Y, subunit B3 )

HSP 1 Score: 135.6 bits (340), Expect = 6.8e-32
Identity = 60/93 (64.52%), Postives = 80/93 (86.02%), Query Frame = 0


Query: 1   MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 60
           +PIANV RIM++ LP++AKIS DAKET+QECVSE+ISFITGEA+++CQRE+RKT+  +D+
Sbjct: 26  LPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDL 85

Query: 61  LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRT 94
           LWAM  LGF+DY+EPL V+L +YRE E ++  T
Sbjct: 86  LWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTT 118

[Close]

BLAST of Moc10g23700 vs. TAIR 10
Match: AT5G47640.1 (nuclear factor Y, subunit B2 )

HSP 1 Score: 132.9 bits (333), Expect = 4.4e-31
Identity = 58/90 (64.44%), Postives = 79/90 (87.78%), Query Frame = 0


Query: 1   MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 60
           +PIANV RIM++ LP++AKIS DAKET+QECVSE+ISF+TGEA+++CQ+E+RKT+  +D+
Sbjct: 32  LPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKTINGDDL 91

Query: 61  LWAMGKLGFDDYIEPLTVFLNRYRESESDR 91
           LWAM  LGF+DY+EPL V+L R+RE E +R
Sbjct: 92  LWAMTTLGFEDYVEPLKVYLQRFREIEGER 121

The following BLAST results are available for this feature:

BLAST of Moc10g23700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905819.1	1.6e-67	97.73	nuclear transcription factor Y subunit B-9-like [Benincasa hispida]	[more]
TYK13777.1	1.4e-66	96.97	nuclear transcription factor Y subunit B-9 [Cucumis melo var. makuwa]	[more]
XP_008449191.1	1.4e-66	96.97	PREDICTED: nuclear transcription factor Y subunit B-9 [Cucumis melo]	[more]
KAA0065753.1	1.4e-66	96.97	nuclear transcription factor Y subunit B-9 [Cucumis melo var. makuwa]	[more]
XP_031738736.1	1.4e-66	96.97	nuclear transcription factor Y subunit B-9-like [Cucumis sativus]	[more]

BLAST of Moc10g23700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SFD8	1.4e-42	63.09	Nuclear transcription factor Y subunit B-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q84W66	1.0e-40	88.89	Nuclear transcription factor Y subunit B-6 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
O23310	9.6e-31	64.52	Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9FGJ3	6.2e-30	64.44	Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q69J40	8.1e-30	64.44	Nuclear transcription factor Y subunit B-10 OS=Oryza sativa subsp. japonica OX=3...	[more]

BLAST of Moc10g23700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CPF3	6.6e-67	96.97	Nuclear transcription factor Y subunit B-9 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A5A7VC19	6.6e-67	96.97	Nuclear transcription factor Y subunit B-9 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BKV5	6.6e-67	96.97	nuclear transcription factor Y subunit B-9 OS=Cucumis melo OX=3656 GN=LOC1034911...	[more]
A0A6J1KV71	4.3e-66	95.45	nuclear transcription factor Y subunit B-9-like isoform X1 OS=Cucurbita maxima O...	[more]
A0A6J1KTC3	4.3e-66	95.45	nuclear transcription factor Y subunit B-3-like isoform X2 OS=Cucurbita maxima O...	[more]

BLAST of Moc10g23700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21970.1	1.0e-43	63.09	Histone superfamily protein	[more]
AT5G47670.1	7.3e-42	88.89	nuclear factor Y, subunit B6	[more]
AT5G47670.2	7.3e-42	88.89	nuclear factor Y, subunit B6	[more]
AT4G14540.1	6.8e-32	64.52	nuclear factor Y, subunit B3	[more]
AT5G47640.1	4.4e-31	64.44	nuclear factor Y, subunit B2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00615	CCAATSUBUNTA	coord: 28..46 score: 43.9 coord: 66..84 score: 31.46 coord: 47..65 score: 32.06
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..280
None	No IPR available	PANTHER	PTHR11064:SF20	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6	coord: 1..155
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 1..64 e-value: 1.0E-24 score: 86.5
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 1..101 e-value: 1.1E-37 score: 130.9
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 1..90
IPR027113	Transcription factor NFYB/HAP3	PANTHER	PTHR11064	CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED	coord: 1..155
IPR003956	Transcription factor, NFYB/HAP3, conserved site	PROSITE	PS00685	NFYB_HAP3	coord: 31..47

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g23700.1	Moc10g23700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding