Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATACTTGCCTAAACAATGGGAGCCTAAAGTCACTACCATTCAAGAGGCAAAGGATCTCAAGACTCTCTCCATGGACGAACTCATTGGTTCGTTGATGGCGCATGAGATAAAGATCAAGAAAAACATGAAGGATGAGAAGAAAAAGAAAGAGAAGATCATAGCATTAAAGGCCATCACCTTGGAAGTTTACTCTGAAGCTGTGAATGCCCTTGATGAAGATGATGTGGCCTATCTCTCATGTAAGTATAAAAATTTCATTAAGAGGAAGAAACAATTCAAGAAGCATTTCTCCAACCAAAAAGAGTCAAAAGGTGAAAAGGGCAAAAATGATGAGGTAATTTGATATGAATGCAAAAAATCGGGTCATATTAGAACCGATTGCCCGTTTCTTAAATCATCCAAGAAATCTAAGAAGAAAGCAATGAAGGTTACTTGGGATGATAGTGATGAAAGTGGAAGTGAAAGTGAGAATGAAGAAGTGGTCAACTTTTGCTTCATGGCTCATAGTGACAAAGAGGATGAACAAGATGATGAGGTAAATCTTGACCCCCTTTCTTATGATGAGTTGTTTACAGCGTTTGAGAATATGCAAAATGATTTAGAAAAACTTGGTTCTAAATATGTTATGCTTAAAAAGAAATGCAATGTCTTAACTAGTGAAAATAAGTCTTTACTTGATGATATTGCTTGCTTAAAGAAAAATAAGCATGATGTTGTATATCTTTTGTAA
mRNA sequence
ATGGTATACTTGCCTAAACAATGGGAGCCTAAAGTCACTACCATTCAAGAGGCAAAGGATCTCAAGACTCTCTCCATGGACGAACTCATTGGTTCGTTGATGGCGCATGAGATAAAGATCAAGAAAAACATGAAGGATGAGAAGAAAAAGAAAGAGAAGATCATAGCATTAAAGGCCATCACCTTGGAAGTTTACTCTGAAGCTGTGAATGCCCTTGATGAAGATGATGTGGCCTATCTCTCATGTAAGTATAAAAATTTCATTAAGAGGAAGAAACAATTCAAGAAGCATTTCTCCAACCAAAAAGAGTCAAAAGGTGAAAAGGGCAAAAATGATGAGAAATCTAAGAAGAAAGCAATGAAGGTTACTTGGGATGATAGTGATGAAAGTGGAAGTGAAAGTGAGAATGAAGAAGTGGTCAACTTTTGCTTCATGGCTCATAGTGACAAAGAGGATGAACAAGATGATGAGGTAAATCTTGACCCCCTTTCTTATGATGAGTTGTTTACAGCGTTTGAGAATATGCAAAATGATTTAGAAAAACTTGGTTCTAAATATGTTATGCTTAAAAAGAAATGCAATGTCTTAACTAGTGAAAATAAGTCTTTACTTGATGATATTGCTTGCTTAAAGAAAAATAAGCATGATGTTGTATATCTTTTGTAA
Coding sequence (CDS)
ATGGTATACTTGCCTAAACAATGGGAGCCTAAAGTCACTACCATTCAAGAGGCAAAGGATCTCAAGACTCTCTCCATGGACGAACTCATTGGTTCGTTGATGGCGCATGAGATAAAGATCAAGAAAAACATGAAGGATGAGAAGAAAAAGAAAGAGAAGATCATAGCATTAAAGGCCATCACCTTGGAAGTTTACTCTGAAGCTGTGAATGCCCTTGATGAAGATGATGTGGCCTATCTCTCATGTAAGTATAAAAATTTCATTAAGAGGAAGAAACAATTCAAGAAGCATTTCTCCAACCAAAAAGAGTCAAAAGGTGAAAAGGGCAAAAATGATGAGAAATCTAAGAAGAAAGCAATGAAGGTTACTTGGGATGATAGTGATGAAAGTGGAAGTGAAAGTGAGAATGAAGAAGTGGTCAACTTTTGCTTCATGGCTCATAGTGACAAAGAGGATGAACAAGATGATGAGGTAAATCTTGACCCCCTTTCTTATGATGAGTTGTTTACAGCGTTTGAGAATATGCAAAATGATTTAGAAAAACTTGGTTCTAAATATGTTATGCTTAAAAAGAAATGCAATGTCTTAACTAGTGAAAATAAGTCTTTACTTGATGATATTGCTTGCTTAAAGAAAAATAAGCATGATGTTGTATATCTTTTGTAA
Protein sequence
MVYLPKQWEPKVTTIQEAKDLKTLSMDELIGSLMAHEIKIKKNMKDEKKKKEKIIALKAITLEVYSEAVNALDEDDVAYLSCKYKNFIKRKKQFKKHFSNQKESKGEKGKNDEKSKKKAMKVTWDDSDESGSESENEEVVNFCFMAHSDKEDEQDDEVNLDPLSYDELFTAFENMQNDLEKLGSKYVMLKKKCNVLTSENKSLLDDIACLKKNKHDVVYLL
Homology
BLAST of Moc10g15800 vs. NCBI nr
Match:
XP_022156978.1 (uncharacterized protein LOC111023806 [Momordica charantia])
HSP 1 Score: 294.3 bits (752), Expect = 8.9e-76
Identity = 165/218 (75.69%), Postives = 176/218 (80.73%), Query Frame = 0
Query: 4 LPKQWEPKVTTIQEAKDLKTLSMDELIGSLMAHEIKIKKNMKDEKKKKEKIIALKAITLE 63
LPK+WEPKVT IQEAKDLKTLSMDELIGSLM HEIKIKKNM+DEKKKK+K IALKAITLE
Sbjct: 32 LPKKWEPKVTIIQEAKDLKTLSMDELIGSLMTHEIKIKKNMEDEKKKKDKSIALKAITLE 91
Query: 64 VYSEAVNALDEDDVAYLSCKYKNFIKRKKQFKKHFSNQKESKGEKGKNDEKSKKKAMKVT 123
V E N LDEDDVAYLS +++ K+ +KSKKKAMK T
Sbjct: 92 VDYEGENTLDEDDVAYLS--------------------RKTDCPLLKSSKKSKKKAMKAT 151
Query: 124 WDDSDESGSESENEEVVNFCFMAHSDKEDEQDDEVNLDPLSYDELFTAFENMQNDLEKLG 183
WDDSDESGSESENEEV NFCFMAHSDKEDEQDDEVNLDPLSYDELF AFENMQN+LEKLG
Sbjct: 152 WDDSDESGSESENEEVANFCFMAHSDKEDEQDDEVNLDPLSYDELFEAFENMQNNLEKLG 211
Query: 184 SKYVMLKKKCNVLTSENKSLLDDIACLKKNKHDVVYLL 222
SKYVMLK KCNV TSENKSL DDIACLKKN+HDV L+
Sbjct: 212 SKYVMLKTKCNVSTSENKSLRDDIACLKKNEHDVDNLI 229
BLAST of Moc10g15800 vs. NCBI nr
Match:
XP_031741720.1 (uncharacterized protein LOC116403915 [Cucumis sativus])
HSP 1 Score: 249.6 bits (636), Expect = 2.5e-62
Identity = 150/235 (63.83%), Postives = 169/235 (71.91%), Query Frame = 0
Query: 4 LPKQWEPKVTTIQEAKDLKTLSMDELIGSLMAHEIKIKKNMKDEKKKKEKIIALKAITLE 63
LPK WE KVT IQEAKDL L ++ELIGSLM HEI +K++++DE KKK K IALK I+LE
Sbjct: 181 LPKTWEAKVTAIQEAKDLTKLPLEELIGSLMTHEIIMKEHLEDESKKK-KSIALKTISLE 240
Query: 64 VYSEAVNALDEDDVAYLSCKYKNFIKRKKQFKKHFSNQKESKGEKGKNDE---------- 123
V E + LDEDD+AY S KYKNFIKRKK FKKH S QKESKGEK K DE
Sbjct: 241 VDPEDEDGLDEDDIAYFSRKYKNFIKRKKYFKKHLSTQKESKGEKSKKDEVICYECKRSG 300
Query: 124 -------------KSKKKAMKVTWDDSDESGSESENEEVVNFCFMAHSDKEDEQDDEVNL 183
KSKKKAMK TWDDS E SESE EE+ N MAHSDK+DE DD+V L
Sbjct: 301 HIRTDCPLLKSSKKSKKKAMKATWDDSSE--SESEVEEMANLGLMAHSDKDDEHDDKVTL 360
Query: 184 DPLSYDELFTAFENMQNDLEKLGSKYVMLKKKCNVLTSENKSLLDDIACLKKNKH 216
+PLS DELF FE+MQNDLEKL SKYV+LKKK NVL SENKSLLD IAC K+N++
Sbjct: 361 EPLSIDELFENFESMQNDLEKLSSKYVVLKKKYNVLISENKSLLDTIACFKENEN 412
BLAST of Moc10g15800 vs. NCBI nr
Match:
KAA0046182.1 (zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa] >TYK00208.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 228.0 bits (580), Expect = 7.8e-56
Identity = 140/236 (59.32%), Postives = 164/236 (69.49%), Query Frame = 0
Query: 1 MVYLPKQWEPKVTTIQEAKDLKTLSMDELIGSLMAHEIKIKKNMKDEKKKKEKIIALKAI 60
+++LPK W+ KVT IQEAKDL L ++ELIGSLM HEI ++++++DE KKK K IAL I
Sbjct: 6 LMFLPKTWDAKVTAIQEAKDLTKLPLEELIGSLMTHEIIMEEHLEDESKKK-KSIALNTI 65
Query: 61 TLEVYSEAVNALDEDDVAYLSCKYKNFIKRKKQFKKHFSNQKESKGEKGKNDE------- 120
+LE+ E + LDEDD+ Y S KYKNFIKRKK FKK+ S QK SKGEK K DE
Sbjct: 66 SLELEDE--DDLDEDDIVYFSRKYKNFIKRKKCFKKYLSTQKVSKGEKSKKDEVICYECK 125
Query: 121 ----------------KSKKKAMKVTWDDSDESGSESENEEVVNFCFMAHSDKEDEQDDE 180
KSK+KAMK TWDDS E SESE EE N M SDKEDE DDE
Sbjct: 126 KLAHIRTDCPFLKSSKKSKRKAMKATWDDSSE--SESEVEETANLGLMVQSDKEDEHDDE 185
Query: 181 VNLDPLSYDELFTAFENMQNDLEKLGSKYVMLKKKCNVLTSENKSLLDDIACLKKN 214
V L+P S +ELF FEN+QNDLEKL SKYV+LKKK NVL+SENKSLLD IAC K+N
Sbjct: 186 VTLEPPSIEELFENFENVQNDLEKLSSKYVVLKKKYNVLSSENKSLLDKIACFKEN 236
BLAST of Moc10g15800 vs. NCBI nr
Match:
XP_022158792.1 (uncharacterized protein LOC111025259 [Momordica charantia])
HSP 1 Score: 207.6 bits (527), Expect = 1.1e-49
Identity = 125/202 (61.88%), Postives = 129/202 (63.86%), Query Frame = 0
Query: 4 LPKQWEPKVTTIQEAKDLKTLSMDELIGSLMAHEIKIKKNMKDEKKKKEKIIALKAITLE 63
LPKQWEPKVT IQEAKDLKTLSMDELIG
Sbjct: 44 LPKQWEPKVTAIQEAKDLKTLSMDELIGE------------------------------- 103
Query: 64 VYSEAVNALDEDDVAYLSCKYKNFIKRKKQFKKHFSNQKESKGEKGKNDE---------- 123
NALDEDDVAYLS KYKNFIKRKKQFKK+FSN KE K E K DE
Sbjct: 104 ------NALDEDDVAYLSRKYKNFIKRKKQFKKNFSNXKEXKSEXSKKDEVICYECKKPG 163
Query: 124 -------------KSKKKAMKVTWDDSDESGSESENEEVVNFCFMAHSDKEDEQDDEVNL 183
KSKKKAMK TWDDSDESG+ESENEEV NFCFMAHSDKEDE+DDE+ L
Sbjct: 164 HIRTDCPFLKSSKKSKKKAMKATWDDSDESGNESENEEVANFCFMAHSDKEDEKDDEITL 208
BLAST of Moc10g15800 vs. NCBI nr
Match:
KAA0033952.1 (zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 174.9 bits (442), Expect = 7.9e-40
Identity = 117/192 (60.94%), Postives = 131/192 (68.23%), Query Frame = 0
Query: 34 MAHEIKIKKNMKDEKKKKEKIIALKAITLEVYSEAVNALDEDDVAYLSCKYKNFIKRKKQ 93
M HEI +K+++KDE KKK K IAL I+LE+ E + LDEDD+AY S KY+NFIKRKK
Sbjct: 1 MTHEIIMKEHLKDESKKK-KSIALNTISLELEDE--DDLDEDDIAYFSRKYRNFIKRKKY 60
Query: 94 FKKHFSNQKESKGEKGKNDE-----------------------KSKKKAMKVTWDDSDES 153
FKKH S QKESKGEK K DE KSKKKA+K TWDDS S
Sbjct: 61 FKKHLSTQKESKGEKNKKDEVIYYECKKAGYIRTDCPFLKSSKKSKKKAVKATWDDS--S 120
Query: 154 GSESENEEVVNFCFMAHSDKEDEQDDEVNLDPLSYDELFTAFENMQNDLEKLGSKYVMLK 203
SESE EE+ N MAHSDKEDE DDEV L+ S DELF FE+MQNDLEKL SK V+LK
Sbjct: 121 KSESEVEEMANLGLMAHSDKEDEHDDEVTLEHPSIDELFENFESMQNDLEKLSSK-VVLK 180
BLAST of Moc10g15800 vs. ExPASy TrEMBL
Match:
A0A6J1DS74 (uncharacterized protein LOC111023806 OS=Momordica charantia OX=3673 GN=LOC111023806 PE=4 SV=1)
HSP 1 Score: 294.3 bits (752), Expect = 4.3e-76
Identity = 165/218 (75.69%), Postives = 176/218 (80.73%), Query Frame = 0
Query: 4 LPKQWEPKVTTIQEAKDLKTLSMDELIGSLMAHEIKIKKNMKDEKKKKEKIIALKAITLE 63
LPK+WEPKVT IQEAKDLKTLSMDELIGSLM HEIKIKKNM+DEKKKK+K IALKAITLE
Sbjct: 32 LPKKWEPKVTIIQEAKDLKTLSMDELIGSLMTHEIKIKKNMEDEKKKKDKSIALKAITLE 91
Query: 64 VYSEAVNALDEDDVAYLSCKYKNFIKRKKQFKKHFSNQKESKGEKGKNDEKSKKKAMKVT 123
V E N LDEDDVAYLS +++ K+ +KSKKKAMK T
Sbjct: 92 VDYEGENTLDEDDVAYLS--------------------RKTDCPLLKSSKKSKKKAMKAT 151
Query: 124 WDDSDESGSESENEEVVNFCFMAHSDKEDEQDDEVNLDPLSYDELFTAFENMQNDLEKLG 183
WDDSDESGSESENEEV NFCFMAHSDKEDEQDDEVNLDPLSYDELF AFENMQN+LEKLG
Sbjct: 152 WDDSDESGSESENEEVANFCFMAHSDKEDEQDDEVNLDPLSYDELFEAFENMQNNLEKLG 211
Query: 184 SKYVMLKKKCNVLTSENKSLLDDIACLKKNKHDVVYLL 222
SKYVMLK KCNV TSENKSL DDIACLKKN+HDV L+
Sbjct: 212 SKYVMLKTKCNVSTSENKSLRDDIACLKKNEHDVDNLI 229
BLAST of Moc10g15800 vs. ExPASy TrEMBL
Match:
A0A5A7TRZ7 (Zf-CCHC domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1333G00310 PE=4 SV=1)
HSP 1 Score: 228.0 bits (580), Expect = 3.8e-56
Identity = 140/236 (59.32%), Postives = 164/236 (69.49%), Query Frame = 0
Query: 1 MVYLPKQWEPKVTTIQEAKDLKTLSMDELIGSLMAHEIKIKKNMKDEKKKKEKIIALKAI 60
+++LPK W+ KVT IQEAKDL L ++ELIGSLM HEI ++++++DE KKK K IAL I
Sbjct: 6 LMFLPKTWDAKVTAIQEAKDLTKLPLEELIGSLMTHEIIMEEHLEDESKKK-KSIALNTI 65
Query: 61 TLEVYSEAVNALDEDDVAYLSCKYKNFIKRKKQFKKHFSNQKESKGEKGKNDE------- 120
+LE+ E + LDEDD+ Y S KYKNFIKRKK FKK+ S QK SKGEK K DE
Sbjct: 66 SLELEDE--DDLDEDDIVYFSRKYKNFIKRKKCFKKYLSTQKVSKGEKSKKDEVICYECK 125
Query: 121 ----------------KSKKKAMKVTWDDSDESGSESENEEVVNFCFMAHSDKEDEQDDE 180
KSK+KAMK TWDDS E SESE EE N M SDKEDE DDE
Sbjct: 126 KLAHIRTDCPFLKSSKKSKRKAMKATWDDSSE--SESEVEETANLGLMVQSDKEDEHDDE 185
Query: 181 VNLDPLSYDELFTAFENMQNDLEKLGSKYVMLKKKCNVLTSENKSLLDDIACLKKN 214
V L+P S +ELF FEN+QNDLEKL SKYV+LKKK NVL+SENKSLLD IAC K+N
Sbjct: 186 VTLEPPSIEELFENFENVQNDLEKLSSKYVVLKKKYNVLSSENKSLLDKIACFKEN 236
BLAST of Moc10g15800 vs. ExPASy TrEMBL
Match:
A0A6J1DY46 (uncharacterized protein LOC111025259 OS=Momordica charantia OX=3673 GN=LOC111025259 PE=4 SV=1)
HSP 1 Score: 207.6 bits (527), Expect = 5.3e-50
Identity = 125/202 (61.88%), Postives = 129/202 (63.86%), Query Frame = 0
Query: 4 LPKQWEPKVTTIQEAKDLKTLSMDELIGSLMAHEIKIKKNMKDEKKKKEKIIALKAITLE 63
LPKQWEPKVT IQEAKDLKTLSMDELIG
Sbjct: 44 LPKQWEPKVTAIQEAKDLKTLSMDELIGE------------------------------- 103
Query: 64 VYSEAVNALDEDDVAYLSCKYKNFIKRKKQFKKHFSNQKESKGEKGKNDE---------- 123
NALDEDDVAYLS KYKNFIKRKKQFKK+FSN KE K E K DE
Sbjct: 104 ------NALDEDDVAYLSRKYKNFIKRKKQFKKNFSNXKEXKSEXSKKDEVICYECKKPG 163
Query: 124 -------------KSKKKAMKVTWDDSDESGSESENEEVVNFCFMAHSDKEDEQDDEVNL 183
KSKKKAMK TWDDSDESG+ESENEEV NFCFMAHSDKEDE+DDE+ L
Sbjct: 164 HIRTDCPFLKSSKKSKKKAMKATWDDSDESGNESENEEVANFCFMAHSDKEDEKDDEITL 208
BLAST of Moc10g15800 vs. ExPASy TrEMBL
Match:
A0A5A7SRY3 (Zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold400G00110 PE=4 SV=1)
HSP 1 Score: 174.9 bits (442), Expect = 3.8e-40
Identity = 117/192 (60.94%), Postives = 131/192 (68.23%), Query Frame = 0
Query: 34 MAHEIKIKKNMKDEKKKKEKIIALKAITLEVYSEAVNALDEDDVAYLSCKYKNFIKRKKQ 93
M HEI +K+++KDE KKK K IAL I+LE+ E + LDEDD+AY S KY+NFIKRKK
Sbjct: 1 MTHEIIMKEHLKDESKKK-KSIALNTISLELEDE--DDLDEDDIAYFSRKYRNFIKRKKY 60
Query: 94 FKKHFSNQKESKGEKGKNDE-----------------------KSKKKAMKVTWDDSDES 153
FKKH S QKESKGEK K DE KSKKKA+K TWDDS S
Sbjct: 61 FKKHLSTQKESKGEKNKKDEVIYYECKKAGYIRTDCPFLKSSKKSKKKAVKATWDDS--S 120
Query: 154 GSESENEEVVNFCFMAHSDKEDEQDDEVNLDPLSYDELFTAFENMQNDLEKLGSKYVMLK 203
SESE EE+ N MAHSDKEDE DDEV L+ S DELF FE+MQNDLEKL SK V+LK
Sbjct: 121 KSESEVEEMANLGLMAHSDKEDEHDDEVTLEHPSIDELFENFESMQNDLEKLSSK-VVLK 180
BLAST of Moc10g15800 vs. ExPASy TrEMBL
Match:
A0A6J1DUJ5 (uncharacterized protein LOC111024159 OS=Momordica charantia OX=3673 GN=LOC111024159 PE=4 SV=1)
HSP 1 Score: 172.9 bits (437), Expect = 1.4e-39
Identity = 103/137 (75.18%), Postives = 106/137 (77.37%), Query Frame = 0
Query: 44 MKDEKKKKEKIIALKAITLEVYSEAVNALDEDDVAYLSCKYKNFIKRKKQFKKHFSNQKE 103
M+DEKKKKEK IALKAITLEV S+ NALDEDDVAYLS KYKNFIKRKKQFKK+FSNQKE
Sbjct: 1 MEDEKKKKEKSIALKAITLEVDSKGENALDEDDVAYLSRKYKNFIKRKKQFKKNFSNQKE 60
Query: 104 SKGEKGKNDE-----------------------KSKKKAMKVTWDDSDESGSESENEEVV 158
SKGEK K DE KSKKKAMK TWDDSDESGSESENEEVV
Sbjct: 61 SKGEKSKKDEVICYKCKKPGHIRTDCPLLKSSKKSKKKAMKATWDDSDESGSESENEEVV 120
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022156978.1 | 8.9e-76 | 75.69 | uncharacterized protein LOC111023806 [Momordica charantia] | [more] |
XP_031741720.1 | 2.5e-62 | 63.83 | uncharacterized protein LOC116403915 [Cucumis sativus] | [more] |
KAA0046182.1 | 7.8e-56 | 59.32 | zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo v... | [more] |
XP_022158792.1 | 1.1e-49 | 61.88 | uncharacterized protein LOC111025259 [Momordica charantia] | [more] |
KAA0033952.1 | 7.9e-40 | 60.94 | zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DS74 | 4.3e-76 | 75.69 | uncharacterized protein LOC111023806 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A5A7TRZ7 | 3.8e-56 | 59.32 | Zf-CCHC domain-containing protein/UBN2 domain-containing protein OS=Cucumis melo... | [more] |
A0A6J1DY46 | 5.3e-50 | 61.88 | uncharacterized protein LOC111025259 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A5A7SRY3 | 3.8e-40 | 60.94 | Zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-... | [more] |
A0A6J1DUJ5 | 1.4e-39 | 75.18 | uncharacterized protein LOC111024159 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
Match Name | E-value | Identity | Description | |