Moc10g14800 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g14800
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	DNA mismatch repair protein MSH5
Location	chr10: 11255722 .. 11263595 (-)
RNA-Seq Expression	Moc10g14800
Synteny	Moc10g14800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGAGACAGGTTGAGAGAAGCAACAATTGGGACTCCAGAAAACACTTATGTGGAAGGGAAGAATAGTGGATATGAATGCGTATGTGCATGGAACGAAGATGCCTATTTTTGACAGAAATAATCCCCTGGATTTTTTCGCACTGAAAGGTACTTCTCTGATAATAAACTGAATGAGAAACGAATCGACTATAGCCACTTGGTTCCAGTAAAAGGATGGTTGACCACGATCAGAAAATGGGAACAACTAAAGTATTTAGTGATGAGAAGGTTCCAATCTTCTCAAGAAGGTTATCTCAGTAAAAAATTAATGGCTATGAGACAGTATACTAGCATATGGGAATATCAACGACAATTTGAGATATTAGCTTAGCCATTTAAAGACATTCCTTGGAATCGTTTAAAGGTTAACTTATTAATGGACTAAACTGGAGATTAAGATGGAGCTGTGGATGGTCGATCCTAATGGTCTTAAGTAGGGTAGTGGAGGCAGTATGGAGAGCAGAGGATAAAGTACAGCTACTTAAGTAGGCAAGGGGCGGTTCGTGGAATGATCAATCAGAGATAGCTATAACTGGAGGTATGAAAAAACTACTATACAATTGTCAATAGCTAATAATTACAGACTTGGTCCATCAGCTAGTACTATAGTTTGCAAAGCTTTCAAGTTACAAGGGACGCAAAATGGTGGAGAATATATCCCAAACAGATGACCGATCTTATTGGTAAATTGATTGTCTGGATACATATTCAAGATCGTGTTGGATCCATTGGGCCAAATTTTTGAACAAGATTTCATGTCATTCATTTTCTAAAACTATGCCTTTCAAGTCACCATATGTTAGCGATGCCCCTAAGATGAAAAGCTGAGATAGATTAGTGACTCCTAATGATGTTGCGTATCAACTCCTTAAAGATAAGATTTTAGAAGAGGTTAAATTCAACTGTGGAGAAGCCAGCAATGCATTAAAATCTGTTCAGACAAGTGCTTAAGATAGGTAAATATTGCCGCAGTGATTTAATACTGCCTAGTATGTAAAGCAGAAACTGGCAACAGCTTTTATGGTTCTTTTCCTGTTGTAGCAATGTGTGTGTGTGTATATAAAGGTTTAAAGCTTTTTCTTTTTCTATTTTTTCTCAAGTATTGAATGTTATATATAAAAAGTTTGAAAATTTCTATAGATTGCCTTTCATCTGCCAAACTCAAAGGATCTCACTGGTGTTCCCTTTCCGAGCTATTCTCACACTACTCCCCTTCTCTTATATTTAGTAATTGGGATGCTTTTATTTGTTCTGTTTAGCTGGCTTATTTGGTCTCTGTTTTATGCTTTCGATTTATGTATTTGTATCTTTTAAATTTTTATTTTTCCTTTCACCCCTCCGCGAGTTTGTATCCTTGACAATTTTTGTTCCTTTTCATTTCATCAATGAAAAGTTTGTTTTTTTGTTCCAAAAAAAAAAAAAAAGTTTGAAAATTTCTGGCTCCATCCTTTACCCCAAGGATTTTAAGTATTTTGACATGTAAATGTGGTATTGCGTGAGCATTGTGACACTTGTGCAAATTTGGTATTTGAGATAGTAAATGATAGCCAATTGTAAATAAGCGAGGAGAGCGGGGAAGAGGTCAGGCTGGATTTGGAAGCTTGGAGTTTTTGACACTTGAAATCCTGTAATTCTGGATGCTAGATTTTCTTGTCTATTGGCAAGCTATTCTACTACCGTAGAATTAATGAATTGAAGAGAGAATTACAAGCCTGCATAGTTCTAACCCCAGTTATTCTTCTTCTTCCACCTTCCAGGTTGCTCTTATTGTATTCTTGTCTCATATAGGAAGCTTTGTTCCAGCAGAGGCTGCAACTTTAGGCTTGACTGATAGGTCTGTCTTGCATATAATGACTACCTTCCTTCGTACCAGTGTTGGATTTAAATAATTACTTATCAATATTGACAGAATATTTTGTGCTATGGGAAGCAAGCATATGACTGCAGAACAATCAACTTTTATGATTGACTTGCATCAAGTTGGGATGATGCTGAGGTACACTCGATAAAGTTCCTAACTGCTTGCAATCAGAGTAGTAACTGAGGTTGCAAGATTTTCCTAGAATGAATGTTGATTGTTGTGCAGCTGATGTTTCTAGTAGAAATTTAGACTGGAGTGCTTGAGTAATGGCATGACCTTAGTATTGAATCTGCTACTCTCTATCATTGATTATACTTTATTAAGAATATACACTAACCCTTCTATCTTAAATACTTCCATCGTGAAAAATTCAGGCAGGCAACATGTCAATCGTTGTGCCTGATAGATGAATTTGGTAAAGGTACTCTTACAGAAGGTTAGGCTCGCCAATGTACACCAATTTGAATATGCTTTCCATATCTTGGGCATGATCGTGTTCGGCAGTTGCAGTGTCTTTAATGTTAGTAACTTCACACTGTTTTCTCTATGCATTTAAGATGGCATTGGTCTTCTTGGTGGAACCATCAATCATTTTGCAAGTTCTGATGCTTCTCCTAAGGTTTGACTTCCTCTTCTGAATTGCAGATTTTTTTTTTTAATTGCTTTCCTCATATTTAGTTGGACGTCGTCTATTTTCAAACTCCGTACAAGTACAAATACATGTAAACACCCAAGTATGCATGGTGACACATAACTTTTCTAATAAACACAGCATTAATATTCAACTGCAAAAATTTTAAACAAGAACTTATTTGGAAGGACAAGAACTAAAATGAAATAACTGTAAAAGTTCAGGACAGACAAAACTAAAAAAATAATATTATGAAGTTGGTTCTGGAAAATGAAAGACCTTCACAATTTTGTTTCTTAATTACATAGGGTTAGATTATAGGGACTCCTTGAAATGATTGCTCATGTTTTCAGGTGCTGGTGTGCACTCATCTAACTGAGCTAATTAATGAGGGTTTACTGCCAATGGTAATTCATTTTGCGTTCTTCTATTCCAAAAGTCTGTTGTCTTGGGACATGAATTTTCTAATGCCCCTTTTCATTTATTGCAGTGTGAAAGGATCAAGTTCTACAACATGAGTGTCATACGACCTGAAAATGATTGCTCTGGAAATGAAGATATTGTATTTCTTTATCGGTAATATATGATATACTCCTCTTCTGTTAGATTGCTATTAATCCCAGCTTTTCCTTTGGTAACCTTCTTTTCATTGTTTTTCATAATTTTGTGTTTCTATTAGTTTCTTCAATTTTGAAATGGAAAAAGAAGATAGACATTTAACCGTTTATTCTTCTGTATTTTGAAATTTACAAACAAGAAAAGAAACTACTTTGTCTTGTGTCTCAAAACTTACACGCACGACTAGAAATGGGAGATTTTCATATCCACTTATTCTTCATAACTAAAAATAAGAGAGGAAAAGAGATTGAAATTGGAAACATTTATACACAGCTCAATTACTTTTTCTTTATCTGTTGGTTTTCTTCCATAGAGTTTTTGGGTTGGCAGAAGTCCCCCAACAACACCCATTGTTGTTACTTGAATTTGAATACCTGAACAACAAGTTCTATATATTTTTCTAGTCCTGGGTAATTCTAATTCAGTAGAAGCCAGGGTACCACAGTACAGTTGACATCTATGCATTATCTTTGAATGTTGTCTTAGAGCCATGCTGTCATTATTGTAATCCTAGTTTAGCCTTAGAATGTTAGGACACATTACATTCAGCTTCCTTAAGTTTGACGGTGATGTTCTTGTTTTCCCCCATTGCAGTCTGGTCCCAGGACACGCTCTTCCTAGCTACGGTAAGTAAATTATATAAATACATCTATATGCATATACATTTGCATAGATACATACAGACATACATTCCAATTGCAATCTGTCTTCGCTAAGTATATGAATGCATCTATACATTTCTAGAAAATTCTTTCTGAGACGTGTAAATTTATATCCTGTAGGTCTACACTGTGCACTTCTTGCTGGTATATCTCAAAGCCCATAGCCAGATGAGTTTTAAATATTTTGCATTCTTCAAATTGAAAGTAAAAATTTGTTAGATGCCTCACCCCACCCCATTGCCCCGTGCGAATAATCCGCCCAAAGTATGCTTTAGAATTTCTCAATGTCATAAAAACTTGTGGGTTATTTGTACCATAATGACAGTGGTCTTCTTGCTTCCATTATTGCTGCAAATTGATCCTTACGTACTTGTAATTGTATAGGCGTTCCTGAGGAGGTTATTAAGAGAGCAGCATTTGTTTTGGATGCCATGGGGAATAATAAACATGTTGAGCGGCTGCAAAATGAGAATTTATCCGCTCAAGAGAAGCTATACCAGGTGGAGTTTTCCTTCAATTTCAATTCTTAAATTGTGTAGTTTGAACTTTGATCTATCTATGATGCCTCACCACCTGTTGGCAGAATGATGATGCGTTTGATCTTTGAACTAAATACAGGATGCCGTCGACAAGTTGCTGGGACTTGATGTTAACAGGTGTGATCTAAGCTGTTTTTTCCAGGACATATTTCCTTCTTAATCGAAGGTAATCGAACATATTTCCCTTTATGATGGTTGCATTTATTTAGAGTTCATACGACTTTACAAAGTTTCAATTATGTCTTCAAACTTAGAAGATAATTTTTATTATAGTAACTTGTAGCTTCCATGTTACTTAAATATTGATGTGCCAATGCTGGTTGAACTAAGAACGATGATTTGACACGATGTGATTATGCTGATTGAATAAAAATGACGATTAGACATAGTAAATTTTAGACCAAAATTTTCAGCCTGTTAAATCTAATTTATCTAGTTGGCCTAGTTGCTTGTATCATATTGTGTAAAGTCATTACTCTTCAACCAGCGTGTCAGTTAATATCTAAGTGATGGTGTCATCCACAAGGACTTATTAGAATCAAGATTGAAAGTTCATGAACGTAAATAAAACCTTTTATGGTTAACGGACGTAATTGAACAACTACTAAGGTTCATGAACTAAATTTATAATTTAACTGGGAAATTTCAATTTTAGCCTTGTTCCAGAGAAACTTTCAGGTATTGTTGGCAGCGTTTAATTTGGTTTGTCTTACACACATTTTCTCATTTAAAAAGGGAAAAAAATCTCCGTAGAATATTAATCCATTTTTGGAAGCTTTTTTTTTTTAATCAAGTTATAATATGGTAAACTTATAAATGCATAAACTATCCAGAAAATTAGGATACTTTCAGGGGAATGCACATCAACAAGATTTTACTCTAGTTTTGGTTGTAATTTAATTAATAACTTACCACATTTTGGTTTCCTTTCTTAACTTCGGGAGTACTCATCTTTCACGTGTAACTATTTTAATCTTGTTCTCAAGCTTAGATTAAATCACCAATCTAATCAATCAGATTTGAGTGATGAAAACGTATATTGATGTCGTTGAAATTGATAACTCAAATTTACAAATACGTATTGACAGATATTTGAATATCTGAACTTTTTTATGCTCGCTAATTAAGAGGGAATATTTTCTCAATTTTTATTATCCATAGATATTTAAATTTTATTTTTACTAGTTTGAAATTTGATTGATTCATTAATAAATAAACATGTTAGTAGAAAATAAACACACATTTAATAATAATAAAATGTTGGGCTGTAGACAATCATTATTGCTATTATTTTTTTTAAAGAAAATTCAATAAAGAAGCAGGGGATTCAAACTTAAGTAATGCGTTGATAAGTTGATCCGTTTGGTAACATTCTCTTTTCTTATTTATGTTTCTTCACTTTTAATAAATAAAAATAAAATTGTATGACCTTTAATATCGATGAATTCAATCAAGAATAGTTAAATAATATTTATATTTACATTTTGTAACAAATTGGAAATGGAAACGAGAAACTTGCTTTGATTATTTTCAAAATTTCTATACAATTTTGAGGGTGTTCTCAAAAAATGAGAAATAAGAAATATAATTAATTGCAAAATGTTTAGATTTCTTAATAAAACTTGAAAACGAGGAACAATAGACGAGAATATTATCAAACGGGCCTTATATGTTCAACTTTCACAAACTTGAATCTTTTATGGGTTGGGTTGGATTCGTCGAGTTGTCGGATTTTTTGAACACCCCTATTGTGAATTGTTTGTGTATGCGATCACTACATTGTTTCCGTTCCAAAAGTATCCTACTTTCTAACCTTGAGGGAGTGTATTAGTGCTGGAGTACAAAATCAGACTTGCTACCTTACAATCCAAAGATAGAGAAAACTTGCAGGAAGTTAAAGACGTGAACAGAAGTTGAGAAAAATCCAAAAAAGAGAGGAAAAGAATTAGCTGAAATCAAATTTGTCATTCCCAAAATCACTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGATTTTGAAAAATTAAAAGAATGGGCAGCTGGTAGGTGATTTTGGTTGGATTGATGGTCATATAATCACATCCTAAAATTAAGCATTAAATTTGCAAAATTACCCTAAAAAAGTCCCAAAATATTTATATTTAGCACTAGAAATGGAAGGGACATAGTAATTATCATCAATAATGACCGGAAATCATAATTTTTTTAAATATAATTGCAAAATAAATTAATAGAAATAGATATTTATAAAGCAATAAAACAATGGTAATGGTATTATCATTACAAAAGTTTTAGAGAGATAAAAGTTAGAGACCAACAAAAATCTTAGAGAGATAAATATAAGAGGGTGAGAGCCAAAAAAAAAATTTAAGAGAGAGAAATAAACTCAAGAAAGAGATTAGAACTAAAAATTTAAAGAGATATTACAAAAAAAATTTTAGAGAAAAAATTTAGATAGAATAAACAAAATTAAAGATAAAAAAGTTCACAGGTGACAACAATTTTAGAAATGAAAAAATCTAACTTTCCGAAAAAATAAGGTTAAATAGAAAGTCAAGTTTGAACTTGAGAATTGTTGTTAAAAATTATTTTAATCGTGCTAAAATCACTTCCAAACATGTTCCTAATTCTACTAGCACTCCCAAACACACCATTAGTTTAAGAAAACAAGTGTGTTTTGTTCCTGAGTTCTGTCGAAATGATCTGTCACTTTATTATTATATCATTTTGTCGTTTTTTTTTAATTCTTGTGCTCAAGTAATGTTTTTATTATTACACATCTAAATTATTGTGTTAATCTTAATCAAAATAACTACTTAAACAAAATTATAAAATATTCCTAAAACAATATAACTTAAGATCTCAATTTAATAATGGAAGGAAACAAATATTTATTAATTAAATTTTTTAAAAATCATTAGAAAGGCAGTGGAAGTCAACCAACAAAAATTCAGTTTACATGACTTTATGCTTAATAACACTACCCATCAAATACAAATTTTAGAACTCTAGGCTAAAAGACTTCACATCTCAAACATATACTAAATAACTACCGACTAATTTAACTCTCTATATATTTTTTAGAAAGCATTTTTCAAAATATAAGCAAATTTTTAAAACTAAAAAAAAAAAAAGTTTTTGAAAACTTGTGAGAAAATATGTGTGCAGAGATTAGTGAAAAAAAGGTGCTTAGCAACTAGAAAGAAGCTAATGTGATATACATGTGTCAATATATATAAAAAGTAATTAGCGTACATGTCAAGTGAGAAATCAATAATGAACTTTTAAGAAATAATAATAATAATGAACTTTTCAGCTAAAAGCATCCATTTGAGTATTGTATTTAGTCAATCTGTGTGTATTTATATTTATATAATAGGAAAGAACAGGTGTTGCGAAACAAGACTATTCCGTTAGTTAAAGTCTTGTGGAGGAATCATGCAGTAGAAGAGGCAACATGGGAAAGTGAGGATCAGATGCGCACTCAATACCCTCGTCTATTTCCTTAA

mRNA sequence

ATGGAAGGAGACAGGTTGAGAGAAGCAACAATTGGGACTCCAGAAAACACTTATGTGGAAGGGAAGAATAGTGGATATGAATGCGTTGCTCTTATTGTATTCTTGTCTCATATAGGAAGCTTTGTTCCAGCAGAGGCTGCAACTTTAGGCTTGACTGATAGAATATTTTGTGCTATGGGAAGCAAGCATATGACTGCAGAACAATCAACTTTTATGATTGACTTGCATCAAGTTGGGATGATGCTGAGGCAGGCAACATGTCAATCGTTGTGCCTGATAGATGAATTTGGTAAAGGTACTCTTACAGAAGATGGCATTGGTCTTCTTGGTGGAACCATCAATCATTTTGCAAGTTCTGATGCTTCTCCTAAGGTGCTGGTGTGCACTCATCTAACTGAGCTAATTAATGAGGGTTTACTGCCAATGTGTGAAAGGATCAAGTTCTACAACATGAGTGTCATACGACCTGAAAATGATTGCTCTGGAAATGAAGATATTGTATTTCTTTATCGTCTGGTCCCAGGACACGCTCTTCCTAGCTACGGTCTACACTGTGCACTTCTTGCTGGCGTTCCTGAGGAGGTTATTAAGAGAGCAGCATTTGTTTTGGATGCCATGGGGAATAATAAACATGTTGAGCGGCTGCAAAATGAGAATTTATCCGCTCAAGAGAAGCTATACCAGGATGCCGTCGACAAGTTGCTGGGACTTGATGTTAACAGGAAAGAACAGGTGTTGCGAAACAAGACTATTCCGTTAGTTAAAGTCTTGTGGAGGAATCATGCAGTAGAAGAGGCAACATGGGAAAGTGAGGATCAGATGCGCACTCAATACCCTCGTCTATTTCCTTAA

Coding sequence (CDS)

ATGGAAGGAGACAGGTTGAGAGAAGCAACAATTGGGACTCCAGAAAACACTTATGTGGAAGGGAAGAATAGTGGATATGAATGCGTTGCTCTTATTGTATTCTTGTCTCATATAGGAAGCTTTGTTCCAGCAGAGGCTGCAACTTTAGGCTTGACTGATAGAATATTTTGTGCTATGGGAAGCAAGCATATGACTGCAGAACAATCAACTTTTATGATTGACTTGCATCAAGTTGGGATGATGCTGAGGCAGGCAACATGTCAATCGTTGTGCCTGATAGATGAATTTGGTAAAGGTACTCTTACAGAAGATGGCATTGGTCTTCTTGGTGGAACCATCAATCATTTTGCAAGTTCTGATGCTTCTCCTAAGGTGCTGGTGTGCACTCATCTAACTGAGCTAATTAATGAGGGTTTACTGCCAATGTGTGAAAGGATCAAGTTCTACAACATGAGTGTCATACGACCTGAAAATGATTGCTCTGGAAATGAAGATATTGTATTTCTTTATCGTCTGGTCCCAGGACACGCTCTTCCTAGCTACGGTCTACACTGTGCACTTCTTGCTGGCGTTCCTGAGGAGGTTATTAAGAGAGCAGCATTTGTTTTGGATGCCATGGGGAATAATAAACATGTTGAGCGGCTGCAAAATGAGAATTTATCCGCTCAAGAGAAGCTATACCAGGATGCCGTCGACAAGTTGCTGGGACTTGATGTTAACAGGAAAGAACAGGTGTTGCGAAACAAGACTATTCCGTTAGTTAAAGTCTTGTGGAGGAATCATGCAGTAGAAGAGGCAACATGGGAAAGTGAGGATCAGATGCGCACTCAATACCCTCGTCTATTTCCTTAA

Protein sequence

MEGDRLREATIGTPENTYVEGKNSGYECVALIVFLSHIGSFVPAEAATLGLTDRIFCAMGSKHMTAEQSTFMIDLHQVGMMLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTINHFASSDASPKVLVCTHLTELINEGLLPMCERIKFYNMSVIRPENDCSGNEDIVFLYRLVPGHALPSYGLHCALLAGVPEEVIKRAAFVLDAMGNNKHVERLQNENLSAQEKLYQDAVDKLLGLDVNRKEQVLRNKTIPLVKVLWRNHAVEEATWESEDQMRTQYPRLFP

Homology

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BLAST of Moc10g14800 vs. NCBI nr
Match: XP_022151299.1 (DNA mismatch repair protein MSH5 [Momordica charantia])

HSP 1 Score: 431.4 bits (1108), Expect = 6.0e-117
Identity = 215/221 (97.29%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 21  GKNSGYECVALIVFLSHIGSFVPAEAATLGLTDRIFCAMGSKHMTAEQSTFMIDLHQVGM 80
           GK+   + VALIVFLSHIGSFVPAEAATLGLTDRIFCAMGSKHMTAEQSTFMIDLHQVGM
Sbjct: 574 GKSIYIKQVALIVFLSHIGSFVPAEAATLGLTDRIFCAMGSKHMTAEQSTFMIDLHQVGM 633

Query: 81  MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTINHFASSDASPKVLVCTHLTELINEGLL 140
           MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTINHFASSDASPKVLVCTHLTELINEGLL
Sbjct: 634 MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTINHFASSDASPKVLVCTHLTELINEGLL 693

Query: 141 PMCERIKFYNMSVIRPENDCSGNEDIVFLYRLVPGHALPSYGLHCALLAGVPEEVIKRAA 200
           PMCERIKFYNMSVIRPENDCSGNEDIVFLYRLVPGHALPSYGLHCALLAGVPEEVIKRAA
Sbjct: 694 PMCERIKFYNMSVIRPENDCSGNEDIVFLYRLVPGHALPSYGLHCALLAGVPEEVIKRAA 753

Query: 201 FVLDAMGNNKHVERLQNENLSAQEKLYQDAVDKLLGLDVNR 242
           FVLDAMGNNKHVERLQNENLSAQEKLYQDAVDKLLGLDVNR
Sbjct: 754 FVLDAMGNNKHVERLQNENLSAQEKLYQDAVDKLLGLDVNR 794

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BLAST of Moc10g14800 vs. NCBI nr
Match: KAG6577482.1 (DNA mismatch repair protein MSH5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 405.2 bits (1040), Expect = 4.6e-109
Identity = 201/221 (90.95%), Postives = 212/221 (95.93%), Query Frame = 0


Query: 21  GKNSGYECVALIVFLSHIGSFVPAEAATLGLTDRIFCAMGSKHMTAEQSTFMIDLHQVGM 80
           GK+   + VALIVFLSHIGSFVPA+AAT+GLTDRIFCAMGSKHMTAEQSTFMIDL QVGM
Sbjct: 502 GKSIYIKQVALIVFLSHIGSFVPADAATVGLTDRIFCAMGSKHMTAEQSTFMIDLLQVGM 561

Query: 81  MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTINHFASSDASPKVLVCTHLTELINEGLL 140
           MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTI+HFASS+ SPKVLVCTHLTELINE LL
Sbjct: 562 MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTIDHFASSNDSPKVLVCTHLTELINESLL 621

Query: 141 PMCERIKFYNMSVIRPENDCSGNEDIVFLYRLVPGHALPSYGLHCALLAGVPEEVIKRAA 200
           PMC+RIKFYNMSVIRP+NDC+ NEDIVFLYRLVPGHALPSYGLHCALLAGVP+EVIKRAA
Sbjct: 622 PMCKRIKFYNMSVIRPDNDCTENEDIVFLYRLVPGHALPSYGLHCALLAGVPDEVIKRAA 681

Query: 201 FVLDAMGNNKHVERLQNENLSAQEKLYQDAVDKLLGLDVNR 242
           FVLDAMGNNKHVERL NENLSAQ+KLYQDAVDKLLGLDVNR
Sbjct: 682 FVLDAMGNNKHVERLHNENLSAQDKLYQDAVDKLLGLDVNR 722

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BLAST of Moc10g14800 vs. NCBI nr
Match: XP_023553301.1 (DNA mismatch repair protein MSH5 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553302.1 DNA mismatch repair protein MSH5 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 404.1 bits (1037), Expect = 1.0e-108
Identity = 200/221 (90.50%), Postives = 212/221 (95.93%), Query Frame = 0


Query: 21  GKNSGYECVALIVFLSHIGSFVPAEAATLGLTDRIFCAMGSKHMTAEQSTFMIDLHQVGM 80
           GK+   + VALIVFLSHIGSFVPA+AAT+GLTDRIFCAMGSKHMTAEQSTFMIDL QVGM
Sbjct: 575 GKSIYIKQVALIVFLSHIGSFVPADAATVGLTDRIFCAMGSKHMTAEQSTFMIDLLQVGM 634

Query: 81  MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTINHFASSDASPKVLVCTHLTELINEGLL 140
           MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTI+HFASS+ SPKVLVCTHLTELINE LL
Sbjct: 635 MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTIDHFASSNDSPKVLVCTHLTELINESLL 694

Query: 141 PMCERIKFYNMSVIRPENDCSGNEDIVFLYRLVPGHALPSYGLHCALLAGVPEEVIKRAA 200
           PMC+RIKFYNMSVIRP+NDC+ NEDIVFLYRLVPGHALPSYGLHCALLAGVP+EVIKRAA
Sbjct: 695 PMCKRIKFYNMSVIRPDNDCTENEDIVFLYRLVPGHALPSYGLHCALLAGVPDEVIKRAA 754

Query: 201 FVLDAMGNNKHVERLQNENLSAQEKLYQDAVDKLLGLDVNR 242
           FVLDAMGNNKHVERL NENLSAQ+KLYQDAVDKLLGLDVN+
Sbjct: 755 FVLDAMGNNKHVERLHNENLSAQDKLYQDAVDKLLGLDVNK 795

[Close]

BLAST of Moc10g14800 vs. NCBI nr
Match: XP_022932275.1 (DNA mismatch repair protein MSH5 isoform X6 [Cucurbita moschata])

HSP 1 Score: 404.1 bits (1037), Expect = 1.0e-108
Identity = 200/221 (90.50%), Postives = 212/221 (95.93%), Query Frame = 0


Query: 21  GKNSGYECVALIVFLSHIGSFVPAEAATLGLTDRIFCAMGSKHMTAEQSTFMIDLHQVGM 80
           GK+   + VALIVFLSHIGSFVPA+AAT+GLTDRIFCAMGSKHMTAEQSTFMIDL QVGM
Sbjct: 513 GKSIYIKQVALIVFLSHIGSFVPADAATVGLTDRIFCAMGSKHMTAEQSTFMIDLLQVGM 572

Query: 81  MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTINHFASSDASPKVLVCTHLTELINEGLL 140
           MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTI+HFASS+ SPKVLVCTHLTELINE LL
Sbjct: 573 MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTIDHFASSNDSPKVLVCTHLTELINESLL 632

Query: 141 PMCERIKFYNMSVIRPENDCSGNEDIVFLYRLVPGHALPSYGLHCALLAGVPEEVIKRAA 200
           PMC+RIKFYNMSVIRP+NDC+ NEDIVFLYRLVPGHALPSYGLHCALLAGVP+EVIKRAA
Sbjct: 633 PMCKRIKFYNMSVIRPDNDCTENEDIVFLYRLVPGHALPSYGLHCALLAGVPDEVIKRAA 692

Query: 201 FVLDAMGNNKHVERLQNENLSAQEKLYQDAVDKLLGLDVNR 242
           FVLDAMGNNKHVERL NENLSAQ+KLYQDAVDKLLGLDVN+
Sbjct: 693 FVLDAMGNNKHVERLHNENLSAQDKLYQDAVDKLLGLDVNK 733

[Close]

BLAST of Moc10g14800 vs. NCBI nr
Match: XP_022932274.1 (DNA mismatch repair protein MSH5 isoform X5 [Cucurbita moschata])

HSP 1 Score: 404.1 bits (1037), Expect = 1.0e-108
Identity = 200/221 (90.50%), Postives = 212/221 (95.93%), Query Frame = 0


Query: 21  GKNSGYECVALIVFLSHIGSFVPAEAATLGLTDRIFCAMGSKHMTAEQSTFMIDLHQVGM 80
           GK+   + VALIVFLSHIGSFVPA+AAT+GLTDRIFCAMGSKHMTAEQSTFMIDL QVGM
Sbjct: 529 GKSIYIKQVALIVFLSHIGSFVPADAATVGLTDRIFCAMGSKHMTAEQSTFMIDLLQVGM 588

Query: 81  MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTINHFASSDASPKVLVCTHLTELINEGLL 140
           MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTI+HFASS+ SPKVLVCTHLTELINE LL
Sbjct: 589 MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTIDHFASSNDSPKVLVCTHLTELINESLL 648

Query: 141 PMCERIKFYNMSVIRPENDCSGNEDIVFLYRLVPGHALPSYGLHCALLAGVPEEVIKRAA 200
           PMC+RIKFYNMSVIRP+NDC+ NEDIVFLYRLVPGHALPSYGLHCALLAGVP+EVIKRAA
Sbjct: 649 PMCKRIKFYNMSVIRPDNDCTENEDIVFLYRLVPGHALPSYGLHCALLAGVPDEVIKRAA 708

Query: 201 FVLDAMGNNKHVERLQNENLSAQEKLYQDAVDKLLGLDVNR 242
           FVLDAMGNNKHVERL NENLSAQ+KLYQDAVDKLLGLDVN+
Sbjct: 709 FVLDAMGNNKHVERLHNENLSAQDKLYQDAVDKLLGLDVNK 749

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BLAST of Moc10g14800 vs. ExPASy Swiss-Prot
Match: F4JEP5 (DNA mismatch repair protein MSH5 OS=Arabidopsis thaliana OX=3702 GN=MSH5 PE=2 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 3.3e-86
Identity = 155/221 (70.14%), Postives = 189/221 (85.52%), Query Frame = 0


Query: 21  GKNSGYECVALIVFLSHIGSFVPAEAATLGLTDRIFCAMGSKHMTAEQSTFMIDLHQVGM 80
           GK+   + VALIVFLSHIGSFVPA+AAT+GLTDRIFCAMGSK MTAEQSTFMIDLHQVGM
Sbjct: 574 GKSIYVKQVALIVFLSHIGSFVPADAATVGLTDRIFCAMGSKFMTAEQSTFMIDLHQVGM 633

Query: 81  MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTINHFASSDASPKVLVCTHLTELINEGLL 140
           MLRQAT +SLCL+DEFGKGTLTEDGIGLLGGTI+HFA+    P+V+VCTHLTEL+NE  L
Sbjct: 634 MLRQATSRSLCLLDEFGKGTLTEDGIGLLGGTISHFATCAEPPRVVVCTHLTELLNESCL 693

Query: 141 PMCERIKFYNMSVIRPENDCSGNEDIVFLYRLVPGHALPSYGLHCALLAGVPEEVIKRAA 200
           P+ E+IKFY MSV+RP+ + +  E+IVFLYRL+PG  L SYGLHCALLAGVPEEV+KRAA
Sbjct: 694 PVSEKIKFYTMSVLRPDTESANMEEIVFLYRLIPGQTLLSYGLHCALLAGVPEEVVKRAA 753

Query: 201 FVLDAMGNNKHVERLQNENLSAQEKLYQDAVDKLLGLDVNR 242
            VLDA  +N +V++L  + +S+Q++ ++DAVDK   LD+++
Sbjct: 754 IVLDAFESNNNVDKLSLDKISSQDQAFKDAVDKFAELDISK 794

[Close]

BLAST of Moc10g14800 vs. ExPASy Swiss-Prot
Match: Q6L4V0 (DNA mismatch repair protein MSH5 OS=Oryza sativa subsp. japonica OX=39947 GN=MSH5 PE=2 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 2.9e-74
Identity = 140/225 (62.22%), Postives = 174/225 (77.33%), Query Frame = 0


Query: 21  GKNSGYECVALIVFLSHIGSFVPAEAATLGLTDRIFCAMGSKHMTAEQSTFMIDLHQVGM 80
           GK+   + VAL+VFL+HIGSFVPA++A +GLTDRIFCAMGSK MT+EQSTFMIDLHQVG 
Sbjct: 577 GKSIYIKQVALVVFLAHIGSFVPADSAIVGLTDRIFCAMGSKSMTSEQSTFMIDLHQVGT 636

Query: 81  MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTINHFASSDASPKVLVCTHLTELINEGLL 140
           MLR AT +SLCL+DEFGKGTLTEDGIGLLGGTI+HF   D  PKVL+ THLT++  E  L
Sbjct: 637 MLRHATSRSLCLLDEFGKGTLTEDGIGLLGGTISHFTDYDCPPKVLLSTHLTQIFTESYL 696

Query: 141 PMCERIKFYNMSVIRPENDCSGNEDIVFLYRLVPGHALPSYGLHCALLAGVPEEVIKRAA 200
           P  E IK Y MSV+ P+   + NED++FLYRLVPG AL S+GLHCA LAGVP EV++RA 
Sbjct: 697 PQSEHIKCYTMSVLNPDEQ-TDNEDVIFLYRLVPGQALLSFGLHCAQLAGVPSEVVQRAV 756

Query: 201 FVLDAMGNNKHVERLQNENLSAQEKLYQDAVDKLLGLDVNRKEQV 246
            VL  + + + + R+  E L+A+++ YQDAV KLL  D ++ + V
Sbjct: 757 TVLGDIHSKRPIRRMVWEKLAAKDQQYQDAVTKLLAFDPHKGDLV 800

[Close]

BLAST of Moc10g14800 vs. ExPASy Swiss-Prot
Match: O43196 (MutS protein homolog 5 OS=Homo sapiens OX=9606 GN=MSH5 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.1e-31
Identity = 86/239 (35.98%), Postives = 129/239 (53.97%), Query Frame = 0


Query: 3   GDRLREATIGTPENTYVEGKNSGYECVALIVFLSHIGSFVPAEAATLGLTDRIFCAMGS- 62
           GD+ R   I  P ++   GK+   + V LI F++ +GSFVPAE A +G  D IF  + S 
Sbjct: 582 GDKGRVKVITGPNSS---GKSIYLKQVGLITFMALVGSFVPAEEAEIGAVDAIFTRIHSC 641

Query: 63  KHMTAEQSTFMIDLHQVGMMLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTINHF-ASSD 122
           + ++   STFMIDL+QV   +  AT QSL LIDEFGKGT T DG+ LL   + H+ A   
Sbjct: 642 ESISLGLSTFMIDLNQVAKAVNNATAQSLVLIDEFGKGTNTVDGLALLAAVLRHWLARGP 701

Query: 123 ASPKVLVCTHLTELINEGLLPMCERIKFYNMSVIRPENDCSGNEDIVFLYRLVPGHALPS 182
             P + V T+   L+   LLP    +++  M        C    D+VF Y++  G A  S
Sbjct: 702 TCPHIFVATNFLSLVQLQLLPQGPLVQYLTMET------CEDGNDLVFFYQVCEGVAKAS 761

Query: 183 YGLHCALLAGVPEEVIKRAAFVLDAMGNNKHVERLQNENLSAQEKLYQDAVDKLLGLDV 240
           +  H A  AG+P++++ R   V D + + K ++ +++     Q +  Q  VDK + LD+
Sbjct: 762 HASHTAAQAGLPDKLVARGKEVSDLIRSGKPIKPVKDLLKKNQMENCQTLVDKFMKLDL 811

[Close]

BLAST of Moc10g14800 vs. ExPASy Swiss-Prot
Match: Q9QUM7 (MutS protein homolog 5 OS=Mus musculus OX=10090 GN=Msh5 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.6e-30
Identity = 89/239 (37.24%), Postives = 127/239 (53.14%), Query Frame = 0


Query: 3   GDRLREATIGTPENTYVEGKNSGYECVALIVFLSHIGSFVPAEAATLGLTDRIFCAMGS- 62
           GD+ R   I  P ++   GK+   + V LI F++ +GSFVPAE A +G+ D IF  + S 
Sbjct: 581 GDQGRVKVITGPNSS---GKSIYLKQVGLITFMALVGSFVPAEEAEIGVIDAIFTRIHSC 640

Query: 63  KHMTAEQSTFMIDLHQVGMMLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTINHF-ASSD 122
           + ++   STFMIDL+QV   +  AT  SL LIDEFGKGT + DG+ LL   + H+ A   
Sbjct: 641 ESISLGLSTFMIDLNQVAKAVNNATEHSLVLIDEFGKGTNSVDGLALLAAVLRHWLALGP 700

Query: 123 ASPKVLVCTHLTELINEGLLPMCERIKFYNMSVIRPENDCSGNEDIVFLYRLVPGHALPS 182
           + P V V T+   L+   LLP    +++  M        C   ED+VF Y+L  G A  S
Sbjct: 701 SCPHVFVATNFLSLVQLQLLPQGPLVQYLTMET------CEDGEDLVFFYQLCQGVASAS 760

Query: 183 YGLHCALLAGVPEEVIKRAAFVLDAMGNNKHVERLQNENLSAQEKLYQDAVDKLLGLDV 240
           +  H A  AG+P+ +I R   V D + + K ++         Q +  Q  VDK L LD+
Sbjct: 761 HASHTAAQAGLPDPLIARGKEVSDLIRSGKPIKATNELLRRNQMENCQALVDKFLKLDL 810

[Close]

BLAST of Moc10g14800 vs. ExPASy Swiss-Prot
Match: A5FQC0 (DNA mismatch repair protein MutS OS=Dehalococcoides mccartyi (strain ATCC BAA-2100 / JCM 16839 / KCTC 5957 / BAV1) OX=216389 GN=mutS PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.8e-30
Identity = 77/190 (40.53%), Postives = 116/190 (61.05%), Query Frame = 0


Query: 21  GKNSGYECVALIVFLSHIGSFVPAEAATLGLTDRIFCAMGSKH-MTAEQSTFMIDLHQVG 80
           GK++  +  ALIV ++ IGS+VPAE A L LTDRIF  +G++  ++A QSTFM+++ +  
Sbjct: 618 GKSTYLKQTALIVLMAQIGSYVPAETAELCLTDRIFTRIGAREDLSAGQSTFMVEMVETA 677

Query: 81  MMLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTINHFASSDA-SPKVLVCTHLTELINEG 140
            +L  AT +SL ++DE G+GT T DG+ +    + +  S  + + K L  TH  EL+   
Sbjct: 678 SILNTATSRSLLILDEIGRGTSTYDGLAIAQAVVEYIHSQPSLTAKTLFATHYHELVE-- 737

Query: 141 LLPMCERIKFYNMSVIRPENDCSGNEDIVFLYRLVPGHALPSYGLHCALLAGVPEEVIKR 200
           L     R+K YN++V           ++VFL+++VPG    SYG+H A LAG+P+ VIKR
Sbjct: 738 LASYLPRVKNYNIAVSEDRG------EVVFLHKIVPGGVDKSYGIHVAKLAGLPKWVIKR 797

Query: 201 AAFVLDAMGN 209
           A  VL  + N
Sbjct: 798 AYEVLTELEN 799

[Close]

BLAST of Moc10g14800 vs. ExPASy TrEMBL
Match: A0A6J1DCL3 (DNA mismatch repair protein MSH5 OS=Momordica charantia OX=3673 GN=LOC111019263 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 2.9e-117
Identity = 215/221 (97.29%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 21  GKNSGYECVALIVFLSHIGSFVPAEAATLGLTDRIFCAMGSKHMTAEQSTFMIDLHQVGM 80
           GK+   + VALIVFLSHIGSFVPAEAATLGLTDRIFCAMGSKHMTAEQSTFMIDLHQVGM
Sbjct: 574 GKSIYIKQVALIVFLSHIGSFVPAEAATLGLTDRIFCAMGSKHMTAEQSTFMIDLHQVGM 633

Query: 81  MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTINHFASSDASPKVLVCTHLTELINEGLL 140
           MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTINHFASSDASPKVLVCTHLTELINEGLL
Sbjct: 634 MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTINHFASSDASPKVLVCTHLTELINEGLL 693

Query: 141 PMCERIKFYNMSVIRPENDCSGNEDIVFLYRLVPGHALPSYGLHCALLAGVPEEVIKRAA 200
           PMCERIKFYNMSVIRPENDCSGNEDIVFLYRLVPGHALPSYGLHCALLAGVPEEVIKRAA
Sbjct: 694 PMCERIKFYNMSVIRPENDCSGNEDIVFLYRLVPGHALPSYGLHCALLAGVPEEVIKRAA 753

Query: 201 FVLDAMGNNKHVERLQNENLSAQEKLYQDAVDKLLGLDVNR 242
           FVLDAMGNNKHVERLQNENLSAQEKLYQDAVDKLLGLDVNR
Sbjct: 754 FVLDAMGNNKHVERLQNENLSAQEKLYQDAVDKLLGLDVNR 794

[Close]

BLAST of Moc10g14800 vs. ExPASy TrEMBL
Match: A0A6J1F1R7 (DNA mismatch repair protein MSH5 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438624 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 4.9e-109
Identity = 200/221 (90.50%), Postives = 212/221 (95.93%), Query Frame = 0


Query: 21  GKNSGYECVALIVFLSHIGSFVPAEAATLGLTDRIFCAMGSKHMTAEQSTFMIDLHQVGM 80
           GK+   + VALIVFLSHIGSFVPA+AAT+GLTDRIFCAMGSKHMTAEQSTFMIDL QVGM
Sbjct: 575 GKSIYIKQVALIVFLSHIGSFVPADAATVGLTDRIFCAMGSKHMTAEQSTFMIDLLQVGM 634

Query: 81  MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTINHFASSDASPKVLVCTHLTELINEGLL 140
           MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTI+HFASS+ SPKVLVCTHLTELINE LL
Sbjct: 635 MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTIDHFASSNDSPKVLVCTHLTELINESLL 694

Query: 141 PMCERIKFYNMSVIRPENDCSGNEDIVFLYRLVPGHALPSYGLHCALLAGVPEEVIKRAA 200
           PMC+RIKFYNMSVIRP+NDC+ NEDIVFLYRLVPGHALPSYGLHCALLAGVP+EVIKRAA
Sbjct: 695 PMCKRIKFYNMSVIRPDNDCTENEDIVFLYRLVPGHALPSYGLHCALLAGVPDEVIKRAA 754

Query: 201 FVLDAMGNNKHVERLQNENLSAQEKLYQDAVDKLLGLDVNR 242
           FVLDAMGNNKHVERL NENLSAQ+KLYQDAVDKLLGLDVN+
Sbjct: 755 FVLDAMGNNKHVERLHNENLSAQDKLYQDAVDKLLGLDVNK 795

[Close]

BLAST of Moc10g14800 vs. ExPASy TrEMBL
Match: A0A6J1F178 (DNA mismatch repair protein MSH5 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111438624 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 4.9e-109
Identity = 200/221 (90.50%), Postives = 212/221 (95.93%), Query Frame = 0


Query: 21  GKNSGYECVALIVFLSHIGSFVPAEAATLGLTDRIFCAMGSKHMTAEQSTFMIDLHQVGM 80
           GK+   + VALIVFLSHIGSFVPA+AAT+GLTDRIFCAMGSKHMTAEQSTFMIDL QVGM
Sbjct: 561 GKSIYIKQVALIVFLSHIGSFVPADAATVGLTDRIFCAMGSKHMTAEQSTFMIDLLQVGM 620

Query: 81  MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTINHFASSDASPKVLVCTHLTELINEGLL 140
           MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTI+HFASS+ SPKVLVCTHLTELINE LL
Sbjct: 621 MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTIDHFASSNDSPKVLVCTHLTELINESLL 680

Query: 141 PMCERIKFYNMSVIRPENDCSGNEDIVFLYRLVPGHALPSYGLHCALLAGVPEEVIKRAA 200
           PMC+RIKFYNMSVIRP+NDC+ NEDIVFLYRLVPGHALPSYGLHCALLAGVP+EVIKRAA
Sbjct: 681 PMCKRIKFYNMSVIRPDNDCTENEDIVFLYRLVPGHALPSYGLHCALLAGVPDEVIKRAA 740

Query: 201 FVLDAMGNNKHVERLQNENLSAQEKLYQDAVDKLLGLDVNR 242
           FVLDAMGNNKHVERL NENLSAQ+KLYQDAVDKLLGLDVN+
Sbjct: 741 FVLDAMGNNKHVERLHNENLSAQDKLYQDAVDKLLGLDVNK 781

[Close]

BLAST of Moc10g14800 vs. ExPASy TrEMBL
Match: A0A6J1EWJ4 (DNA mismatch repair protein MSH5 isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111438624 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 4.9e-109
Identity = 200/221 (90.50%), Postives = 212/221 (95.93%), Query Frame = 0


Query: 21  GKNSGYECVALIVFLSHIGSFVPAEAATLGLTDRIFCAMGSKHMTAEQSTFMIDLHQVGM 80
           GK+   + VALIVFLSHIGSFVPA+AAT+GLTDRIFCAMGSKHMTAEQSTFMIDL QVGM
Sbjct: 529 GKSIYIKQVALIVFLSHIGSFVPADAATVGLTDRIFCAMGSKHMTAEQSTFMIDLLQVGM 588

Query: 81  MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTINHFASSDASPKVLVCTHLTELINEGLL 140
           MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTI+HFASS+ SPKVLVCTHLTELINE LL
Sbjct: 589 MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTIDHFASSNDSPKVLVCTHLTELINESLL 648

Query: 141 PMCERIKFYNMSVIRPENDCSGNEDIVFLYRLVPGHALPSYGLHCALLAGVPEEVIKRAA 200
           PMC+RIKFYNMSVIRP+NDC+ NEDIVFLYRLVPGHALPSYGLHCALLAGVP+EVIKRAA
Sbjct: 649 PMCKRIKFYNMSVIRPDNDCTENEDIVFLYRLVPGHALPSYGLHCALLAGVPDEVIKRAA 708

Query: 201 FVLDAMGNNKHVERLQNENLSAQEKLYQDAVDKLLGLDVNR 242
           FVLDAMGNNKHVERL NENLSAQ+KLYQDAVDKLLGLDVN+
Sbjct: 709 FVLDAMGNNKHVERLHNENLSAQDKLYQDAVDKLLGLDVNK 749

[Close]

BLAST of Moc10g14800 vs. ExPASy TrEMBL
Match: A0A6J1EW67 (DNA mismatch repair protein MSH5 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111438624 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 4.9e-109
Identity = 200/221 (90.50%), Postives = 212/221 (95.93%), Query Frame = 0


Query: 21  GKNSGYECVALIVFLSHIGSFVPAEAATLGLTDRIFCAMGSKHMTAEQSTFMIDLHQVGM 80
           GK+   + VALIVFLSHIGSFVPA+AAT+GLTDRIFCAMGSKHMTAEQSTFMIDL QVGM
Sbjct: 561 GKSIYIKQVALIVFLSHIGSFVPADAATVGLTDRIFCAMGSKHMTAEQSTFMIDLLQVGM 620

Query: 81  MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTINHFASSDASPKVLVCTHLTELINEGLL 140
           MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTI+HFASS+ SPKVLVCTHLTELINE LL
Sbjct: 621 MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTIDHFASSNDSPKVLVCTHLTELINESLL 680

Query: 141 PMCERIKFYNMSVIRPENDCSGNEDIVFLYRLVPGHALPSYGLHCALLAGVPEEVIKRAA 200
           PMC+RIKFYNMSVIRP+NDC+ NEDIVFLYRLVPGHALPSYGLHCALLAGVP+EVIKRAA
Sbjct: 681 PMCKRIKFYNMSVIRPDNDCTENEDIVFLYRLVPGHALPSYGLHCALLAGVPDEVIKRAA 740

Query: 201 FVLDAMGNNKHVERLQNENLSAQEKLYQDAVDKLLGLDVNR 242
           FVLDAMGNNKHVERL NENLSAQ+KLYQDAVDKLLGLDVN+
Sbjct: 741 FVLDAMGNNKHVERLHNENLSAQDKLYQDAVDKLLGLDVNK 781

[Close]

BLAST of Moc10g14800 vs. TAIR 10
Match: AT3G20475.1 (MUTS-homologue 5 )

HSP 1 Score: 319.7 bits (818), Expect = 2.4e-87
Identity = 155/221 (70.14%), Postives = 189/221 (85.52%), Query Frame = 0


Query: 21  GKNSGYECVALIVFLSHIGSFVPAEAATLGLTDRIFCAMGSKHMTAEQSTFMIDLHQVGM 80
           GK+   + VALIVFLSHIGSFVPA+AAT+GLTDRIFCAMGSK MTAEQSTFMIDLHQVGM
Sbjct: 574 GKSIYVKQVALIVFLSHIGSFVPADAATVGLTDRIFCAMGSKFMTAEQSTFMIDLHQVGM 633

Query: 81  MLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTINHFASSDASPKVLVCTHLTELINEGLL 140
           MLRQAT +SLCL+DEFGKGTLTEDGIGLLGGTI+HFA+    P+V+VCTHLTEL+NE  L
Sbjct: 634 MLRQATSRSLCLLDEFGKGTLTEDGIGLLGGTISHFATCAEPPRVVVCTHLTELLNESCL 693

Query: 141 PMCERIKFYNMSVIRPENDCSGNEDIVFLYRLVPGHALPSYGLHCALLAGVPEEVIKRAA 200
           P+ E+IKFY MSV+RP+ + +  E+IVFLYRL+PG  L SYGLHCALLAGVPEEV+KRAA
Sbjct: 694 PVSEKIKFYTMSVLRPDTESANMEEIVFLYRLIPGQTLLSYGLHCALLAGVPEEVVKRAA 753

Query: 201 FVLDAMGNNKHVERLQNENLSAQEKLYQDAVDKLLGLDVNR 242
            VLDA  +N +V++L  + +S+Q++ ++DAVDK   LD+++
Sbjct: 754 IVLDAFESNNNVDKLSLDKISSQDQAFKDAVDKFAELDISK 794

[Close]

BLAST of Moc10g14800 vs. TAIR 10
Match: AT4G02070.1 (MUTS homolog 6 )

HSP 1 Score: 104.4 bits (259), Expect = 1.6e-22
Identity = 68/198 (34.34%), Postives = 97/198 (48.99%), Query Frame = 0


Query: 21   GKNSGYECVALIVFLSHIGSFVPAEAATLGLTDRIFCAMGSK-HMTAEQSTFMIDLHQVG 80
            GK++    V L V L+ IG+ VPAE   +   D+I   MG+K H+ A QSTF+ +L +  
Sbjct: 1088 GKSTLLRQVCLAVILAQIGADVPAETFEVSPVDKICVRMGAKDHIMAGQSTFLTELSETA 1147

Query: 81   MMLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTINHFASS------------------DA 140
            +ML  AT  SL ++DE G+GT T DG  +    + HF                       
Sbjct: 1148 VMLTSATRNSLVVLDELGRGTATSDGQAIAESVLEHFIEKVQCRGFFSTHYHRLSVDYQT 1207

Query: 141  SPKVLVCTHLTELINEGLLPMCERIKFYNMSVIRPENDCSGNEDIVFLYRLVPGHALPSY 200
            +PKV +C H+   I EG+                      G E++ FLYRL PG    SY
Sbjct: 1208 NPKVSLC-HMACQIGEGI---------------------GGVEEVTFLYRLTPGACPKSY 1263

[Close]

BLAST of Moc10g14800 vs. TAIR 10
Match: AT4G02070.2 (MUTS homolog 6 )

HSP 1 Score: 104.4 bits (259), Expect = 1.6e-22
Identity = 68/198 (34.34%), Postives = 97/198 (48.99%), Query Frame = 0


Query: 21   GKNSGYECVALIVFLSHIGSFVPAEAATLGLTDRIFCAMGSK-HMTAEQSTFMIDLHQVG 80
            GK++    V L V L+ IG+ VPAE   +   D+I   MG+K H+ A QSTF+ +L +  
Sbjct: 1085 GKSTLLRQVCLAVILAQIGADVPAETFEVSPVDKICVRMGAKDHIMAGQSTFLTELSETA 1144

Query: 81   MMLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTINHFASS------------------DA 140
            +ML  AT  SL ++DE G+GT T DG  +    + HF                       
Sbjct: 1145 VMLTSATRNSLVVLDELGRGTATSDGQAIAESVLEHFIEKVQCRGFFSTHYHRLSVDYQT 1204

Query: 141  SPKVLVCTHLTELINEGLLPMCERIKFYNMSVIRPENDCSGNEDIVFLYRLVPGHALPSY 200
            +PKV +C H+   I EG+                      G E++ FLYRL PG    SY
Sbjct: 1205 NPKVSLC-HMACQIGEGI---------------------GGVEEVTFLYRLTPGACPKSY 1260

[Close]

BLAST of Moc10g14800 vs. TAIR 10
Match: AT3G24495.1 (MUTS homolog 7 )

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-21
Identity = 67/222 (30.18%), Postives = 109/222 (49.10%), Query Frame = 0


Query: 21   GKNSGYECVALIVFLSHIGSFVPAEAATLGLTDRIFCAMG-SKHMTAEQSTFMIDLHQVG 80
            GK++      L V  + +G +VP E+  + L D IF  +G S  +   +STF+++  +  
Sbjct: 858  GKSTLLRATCLAVIFAQLGCYVPCESCEISLVDTIFTRLGASDRIMTGESTFLVECTETA 917

Query: 81   MMLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTINHFASSDASPKVLVCTHLTELINEGL 140
             +L+ AT  SL ++DE G+GT T DG  +      H        ++L  TH   L  E  
Sbjct: 918  SVLQNATQDSLVILDELGRGTSTFDGYAIAYSVFRHLVEK-VQCRMLFATHYHPLTKE-- 977

Query: 141  LPMCERIKFYNMSVI---RPENDCSG-NEDIVFLYRLVPGHALPSYGLHCALLAGVPEEV 200
                 R+   +M+     R +    G ++D+VFLYRL  G    SYGL  AL+AG+P +V
Sbjct: 978  FASHPRVTSKHMACAFKSRSDYQPRGCDQDLVFLYRLTEGACPESYGLQVALMAGIPNQV 1037

Query: 201  IKRAAFVLDAMGNNKHVERLQNENLSAQEKLYQDAVDKLLGL 238
            ++ A+    AM  +       +E  S    L++D +  L+G+
Sbjct: 1038 VETASGAAQAMKRSIGENFKSSELRSEFSSLHEDWLKSLVGI 1076

[Close]

BLAST of Moc10g14800 vs. TAIR 10
Match: AT4G25540.1 (homolog of DNA mismatch repair protein MSH3 )

HSP 1 Score: 94.7 bits (234), Expect = 1.2e-19
Identity = 61/184 (33.15%), Postives = 99/184 (53.80%), Query Frame = 0


Query: 21   GKNSGYECVALIVFLSHIGSFVPAEAATLGLTDRIFCAMG-SKHMTAEQSTFMIDLHQVG 80
            GK+     VALI  ++ +GSFVPA  A L + D +F  MG S  +   +STF+ +L +  
Sbjct: 822  GKSCYIRQVALISIMAQVGSFVPASFAKLHVLDGVFTRMGASDSIQHGRSTFLEELSEAS 881

Query: 81   MMLRQATCQSLCLIDEFGKGTLTEDGIGLLGGTINHFASSDASPKVLVCTHLTEL--INE 140
             ++R  + +SL ++DE G+GT T DG+ +   T+ H   ++    VL  TH  E+  I+ 
Sbjct: 882  HIIRTCSSRSLVILDELGRGTSTHDGVAIAYATLQHLL-AEKRCLVLFVTHYPEIAEISN 941

Query: 141  GLLPMCERIKFYNMSVIRPENDCSG--NEDIVFLYRLVPGHALPSYGLHCALLAGVPEEV 200
            G       +  Y++S +  + D     ++D+ +LY+LV G    S+G   A LA +P   
Sbjct: 942  G---FPGSVGTYHVSYLTLQKDKGSYDHDDVTYLYKLVRGLCSRSFGFKVAQLAQIPPSC 1001

The following BLAST results are available for this feature:

BLAST of Moc10g14800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151299.1	6.0e-117	97.29	DNA mismatch repair protein MSH5 [Momordica charantia]	[more]
KAG6577482.1	4.6e-109	90.95	DNA mismatch repair protein MSH5, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_023553301.1	1.0e-108	90.50	DNA mismatch repair protein MSH5 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023...	[more]
XP_022932275.1	1.0e-108	90.50	DNA mismatch repair protein MSH5 isoform X6 [Cucurbita moschata]	[more]
XP_022932274.1	1.0e-108	90.50	DNA mismatch repair protein MSH5 isoform X5 [Cucurbita moschata]	[more]

BLAST of Moc10g14800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JEP5	3.3e-86	70.14	DNA mismatch repair protein MSH5 OS=Arabidopsis thaliana OX=3702 GN=MSH5 PE=2 SV...	[more]
Q6L4V0	2.9e-74	62.22	DNA mismatch repair protein MSH5 OS=Oryza sativa subsp. japonica OX=39947 GN=MSH...	[more]
O43196	3.1e-31	35.98	MutS protein homolog 5 OS=Homo sapiens OX=9606 GN=MSH5 PE=1 SV=1	[more]
Q9QUM7	2.6e-30	37.24	MutS protein homolog 5 OS=Mus musculus OX=10090 GN=Msh5 PE=1 SV=1	[more]
A5FQC0	5.8e-30	40.53	DNA mismatch repair protein MutS OS=Dehalococcoides mccartyi (strain ATCC BAA-21...	[more]

BLAST of Moc10g14800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DCL3	2.9e-117	97.29	DNA mismatch repair protein MSH5 OS=Momordica charantia OX=3673 GN=LOC111019263 ...	[more]
A0A6J1F1R7	4.9e-109	90.50	DNA mismatch repair protein MSH5 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1F178	4.9e-109	90.50	DNA mismatch repair protein MSH5 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1EWJ4	4.9e-109	90.50	DNA mismatch repair protein MSH5 isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1EW67	4.9e-109	90.50	DNA mismatch repair protein MSH5 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of Moc10g14800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20475.1	2.4e-87	70.14	MUTS-homologue 5	[more]
AT4G02070.1	1.6e-22	34.34	MUTS homolog 6	[more]
AT4G02070.2	1.6e-22	34.34	MUTS homolog 6	[more]
AT3G24495.1	1.3e-21	30.18	MUTS homolog 7	[more]
AT4G25540.1	1.2e-19	33.15	homolog of DNA mismatch repair protein MSH3	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000432	DNA mismatch repair protein MutS, C-terminal	SMART	SM00534	mutATP5	coord: 21..204 e-value: 7.0E-33 score: 125.2
IPR000432	DNA mismatch repair protein MutS, C-terminal	PFAM	PF00488	MutS_V	coord: 21..205 e-value: 2.6E-38 score: 131.9
IPR000432	DNA mismatch repair protein MutS, C-terminal	PROSITE	PS00486	DNA_MISMATCH_REPAIR_2	coord: 89..105
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 21..276 e-value: 6.5E-56 score: 191.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 21..206
None	No IPR available	PANTHER	PTHR11361:SF20	MUTS PROTEIN HOMOLOG 5	coord: 29..238
IPR045076	DNA mismatch repair MutS family	PANTHER	PTHR11361	DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER	coord: 29..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g14800.1	Moc10g14800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006298	mismatch repair
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0030983	mismatched DNA binding