Moc10g14200 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc10g14200
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionpalmitoyl-protein thioesterase 1-like
Locationchr10: 10896285 .. 10896852 (+)
RNA-Seq ExpressionMoc10g14200
SyntenyMoc10g14200
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAAGTATGAGGGCCGAGGTGAACCTGGCCGAGGTCCGACCTACCGAAGTTCGGTGGGGGCCGATACGAATTACTGTCAACGGCGTGATTATCGGGCATAATCGTCGGTCCCGAGATTACCGGACGTAACCGACGATCCCGAGATTACCGAGCGTAACCGTTGCGAGATTAGCGGGACTACCACCCATAAGTAGAGGACTTCACTCCATGATCAGGTACGATGATTTCTGGCCTCGAACTAAACTGGGAATCCGACCTATACTGACTTGATCGTCGGAGTGCTCACCTTTTTGTGCAGGTCCGCCCAAGTGTTCAGGTCGGTCCGCAGGCCGAGTTCGAGCTGCAATCTGAAATACGTTGTTGTGCATATCCTTGCATAAACAGACTATGTTCAAGACATTGGCTGGGTTCCTCGAGATCCAATGAGACATTTATCATATTCCTAACATTCACATGTAATTCCACTAGTTGTGGACATGACAGTGCAATTGTGAACATTAAATCCAGTGCATTCTGGTTCTCTAATGGAATGAGAGTGTATTTAATTGATCCGGATAGTGTTTGA

mRNA sequence

ATGCTAAGTATGAGGGCCGAGGTGAACCTGGCCGAGGTCCGCCCAAGTGTTCAGGTCGGTCCGCAGGCCGAGTTCGAGCTGCAATCTGAAATACGTTGTTGTGCATATCCTTGCATAAACAGACTATGTTCAAGACATTGGCTGGGTTCCTCGAGATCCAATGAGACATTTATCATATTCCTAACATTCACATGTAATTCCACTAGTTGTGGACATGACAGTGCAATTGTGAACATTAAATCCAGTGCATTCTGGTTCTCTAATGGAATGAGAGTGTATTTAATTGATCCGGATAGTGTTTGA

Coding sequence (CDS)

ATGCTAAGTATGAGGGCCGAGGTGAACCTGGCCGAGGTCCGCCCAAGTGTTCAGGTCGGTCCGCAGGCCGAGTTCGAGCTGCAATCTGAAATACGTTGTTGTGCATATCCTTGCATAAACAGACTATGTTCAAGACATTGGCTGGGTTCCTCGAGATCCAATGAGACATTTATCATATTCCTAACATTCACATGTAATTCCACTAGTTGTGGACATGACAGTGCAATTGTGAACATTAAATCCAGTGCATTCTGGTTCTCTAATGGAATGAGAGTGTATTTAATTGATCCGGATAGTGTTTGA

Protein sequence

MLSMRAEVNLAEVRPSVQVGPQAEFELQSEIRCCAYPCINRLCSRHWLGSSRSNETFIIFLTFTCNSTSCGHDSAIVNIKSSAFWFSNGMRVYLIDPDSV
Homology
[Close]
BLAST of Moc10g14200 vs. NCBI nr
Match: XP_022157401.1 (palmitoyl-protein thioesterase 1-like [Momordica charantia])

HSP 1 Score: 68.2 bits (165), Expect = 4.7e-08
Identity = 30/37 (81.08%), Postives = 32/37 (86.49%), Query Frame = 0 

Query: 62 TFTCNSTSCGHDSAIVNIKSSAFWFSNGMRVYLIDPD 99
          TFT NST+CGH  AI NIKSS FWFSNGMR+YLIDPD
Sbjct: 14 TFTYNSTNCGHGGAIENIKSSVFWFSNGMRMYLIDPD 50

[Close]
BLAST of Moc10g14200 vs. ExPASy TrEMBL
Match: A0A6J1DXY8 (palmitoyl-protein thioesterase 1-like OS=Momordica charantia OX=3673 GN=LOC111024108 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.3e-08
Identity = 30/37 (81.08%), Postives = 32/37 (86.49%), Query Frame = 0 

Query: 62 TFTCNSTSCGHDSAIVNIKSSAFWFSNGMRVYLIDPD 99
          TFT NST+CGH  AI NIKSS FWFSNGMR+YLIDPD
Sbjct: 14 TFTYNSTNCGHGGAIENIKSSVFWFSNGMRMYLIDPD 50

The following BLAST results are available for this feature:
BLAST of Moc10g14200 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022157401.14.7e-0881.08palmitoyl-protein thioesterase 1-like [Momordica charantia][more]
BLAST of Moc10g14200 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc10g14200 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DXY82.3e-0881.08palmitoyl-protein thioesterase 1-like OS=Momordica charantia OX=3673 GN=LOC11102... [more]
BLAST of Moc10g14200 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc10g14200.1Moc10g14200.1mRNA