Moc10g12640 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g12640
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	polyubiquitin-like
Location	chr10: 9581907 .. 9582276 (+)
RNA-Seq Expression	Moc10g12640
Synteny	Moc10g12640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGACAAATTGCGAAGAAAATGGTTGATACGGAAACTTCGTCCCAAGGACAAGGTTATTTTAGGTTCTTTTCATCAATTGCTTCCATTATATTATTTCTGTTTCTGCTTTTCTTGTGTTTGCAAAGAAAAAATTAATGTTTCTTTTTCAACAGATGAAGATTTGTTTGAGAGTGGCCATAAACAAGGTAGTTGTTCTATGGGTTTGGAGATTGTATATGATCGCGGATTTGAAGGCTAAAATTGCAGCAGAAGAAGGTATTCCCATTCAACAAAAAGTCTTGAATTTCCAAGGACGTAGGCTTGAAGATAGCGAAACTCTAGCAGACTATGGCATCAGAAGCGATAATGTTGTGTGCATGTTTTAG

mRNA sequence

ATGAATGACAAATTGCGAAGAAAATGGTTGATACGGAAACTTCGTCCCAAGGACAAGATGAAGATTTGTTTGAGAGTGGCCATAAACAAGGTAGTTGTTCTATGGGTTTGGAGATTGTATATGATCGCGGATTTGAAGGCTAAAATTGCAGCAGAAGAAGGTATTCCCATTCAACAAAAAGTCTTGAATTTCCAAGGACGTAGGCTTGAAGATAGCGAAACTCTAGCAGACTATGGCATCAGAAGCGATAATGTTGTGTGCATGTTTTAG

Coding sequence (CDS)

ATGAATGACAAATTGCGAAGAAAATGGTTGATACGGAAACTTCGTCCCAAGGACAAGATGAAGATTTGTTTGAGAGTGGCCATAAACAAGGTAGTTGTTCTATGGGTTTGGAGATTGTATATGATCGCGGATTTGAAGGCTAAAATTGCAGCAGAAGAAGGTATTCCCATTCAACAAAAAGTCTTGAATTTCCAAGGACGTAGGCTTGAAGATAGCGAAACTCTAGCAGACTATGGCATCAGAAGCGATAATGTTGTGTGCATGTTTTAG

Protein sequence

MNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYGIRSDNVVCMF

Homology

[Close]

BLAST of Moc10g12640 vs. NCBI nr
Match: XP_008463442.1 (PREDICTED: polyubiquitin-like [Cucumis melo] >KAA0025478.1 polyubiquitin-like [Cucumis melo var. makuwa] >TYK00387.1 polyubiquitin-like [Cucumis melo var. makuwa])

HSP 1 Score: 65.9 bits (159), Expect = 2.1e-07
Identity = 38/82 (46.34%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 1   MNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQK 60
           M+ KLRRKWLI+KLRP+ +M+I ++    + + L V     I D+KAKI A+EG P QQ+
Sbjct: 54  MDAKLRRKWLIKKLRPQPEMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAKEGYPQQQQ 113

Query: 61  VLNFQGRRLEDSETLADYGIRS 83
            L F G +L+D  TL   G+ S
Sbjct: 114 RLVFNGWKLDDDRTLGSCGLWS 135

[Close]

BLAST of Moc10g12640 vs. NCBI nr
Match: KAG2582037.1 (hypothetical protein PVAP13_6KG092800 [Panicum virgatum])

HSP 1 Score: 61.2 bits (147), Expect = 5.1e-06
Identity = 32/72 (44.44%), Postives = 46/72 (63.89%), Query Frame = 0


Query: 15  RPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSET 74
           RP D M+I L+    K   L V   Y IA++KAKI  +EGIP+ Q+ L F  + LED +T
Sbjct: 149 RPFDGMQIFLKQLTGKTTTLEVESCYTIANVKAKIQDKEGIPMDQQHLFFADKELEDGQT 208

Query: 75  LADYGIRSDNVV 87
           LADY I+ ++++
Sbjct: 209 LADYNIQEESIL 220

[Close]

BLAST of Moc10g12640 vs. NCBI nr
Match: XP_022154970.1 (ubiquitin-like isoform X1 [Momordica charantia] >XP_022154971.1 ubiquitin-like isoform X1 [Momordica charantia])

HSP 1 Score: 60.1 bits (144), Expect = 1.1e-05
Identity = 34/88 (38.64%), Postives = 53/88 (60.23%), Query Frame = 0


Query: 1   MNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQK 60
           ++ KLR++WL+R L    +M+I +++   K +   +     I  +KAKI A EG P  Q+
Sbjct: 50  LDRKLRKRWLLRNLPRSGQMQINVKMLTGKTLCFEILASNTIDVVKAKIEAMEGYPPDQQ 109

Query: 61  VLNFQGRRLEDSETLADYGIRSDNVVCM 89
            L + GR+LED  TLA+Y IRS + + M
Sbjct: 110 RLIYGGRQLEDGRTLAEYNIRSGSTLHM 137

[Close]

BLAST of Moc10g12640 vs. NCBI nr
Match: CAD6225216.1 (unnamed protein product [Miscanthus lutarioriparius])

HSP 1 Score: 58.5 bits (140), Expect = 3.3e-05
Identity = 31/70 (44.29%), Postives = 46/70 (65.71%), Query Frame = 0


Query: 17 KDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLA 76
          K+KM+I ++    K V L V R   +A++KAKI  +EGIP  Q+ L F G++LED  TLA
Sbjct: 23 KNKMQIFVKTLTGKTVTLEVERSDTVANVKAKIHDKEGIPPDQQRLVFAGKQLEDERTLA 82

Query: 77 DYGIRSDNVV 87
          DY I+ ++ +
Sbjct: 83 DYNIQKESTL 92

[Close]

BLAST of Moc10g12640 vs. NCBI nr
Match: CAE8715441.1 (unnamed protein product, partial [Polarella glacialis])

HSP 1 Score: 57.8 bits (138), Expect = 5.6e-05
Identity = 29/71 (40.85%), Postives = 45/71 (63.38%), Query Frame = 0


Query: 16   PKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETL 75
            P   ++I ++    K++ L V     I D+KAKI  +EGIP  Q++L F+GR+LED  TL
Sbjct: 962  PSPPIQIFVKTLTGKIITLDVEPNDTIDDVKAKIQDKEGIPPDQQILIFEGRQLEDCRTL 1021

Query: 76   ADYGIRSDNVV 87
            +DY I+ +N +
Sbjct: 1022 SDYNIQKENTL 1032

[Close]

BLAST of Moc10g12640 vs. ExPASy Swiss-Prot
Match: P16709 (viral Ubiquitin OS=Autographa californica nuclear polyhedrosis virus OX=46015 GN=vUbi PE=1 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 2.2e-07
Identity = 27/69 (39.13%), Postives = 44/69 (63.77%), Query Frame = 0


Query: 20 MKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYG 79
          M+I ++    K +         +ADLK KIA +EG+P+ Q+ L F G++LEDS+T+ADY 
Sbjct: 1  MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 60

Query: 80 IRSDNVVCM 89
          I+ ++ + M
Sbjct: 61 IQKESTLHM 69

[Close]

BLAST of Moc10g12640 vs. ExPASy Swiss-Prot
Match: P0CG71 (Polyubiquitin-A OS=Caenorhabditis elegans OX=6239 GN=ubq-1 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.4e-06
Identity = 29/73 (39.73%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 14  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSE 73
           LR +  M+I ++  I K + L V     I ++KAKI  +EGIP  Q+ L F G++LED  
Sbjct: 375 LRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 434

Query: 74  TLADYGIRSDNVV 87
           TL+DY I+ ++ +
Sbjct: 435 TLSDYNIQKESTL 447

[Close]

BLAST of Moc10g12640 vs. ExPASy Swiss-Prot
Match: P69315 (Polyubiquitin (Fragment) OS=Linum usitatissimum OX=4006 PE=3 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 2.4e-06
Identity = 30/73 (41.10%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 14  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSE 73
           LR +  M+I L+    K + L V     I ++KAKI  +EGIP  Q+ L F G++LED  
Sbjct: 36  LRLRGGMQIFLKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 95

Query: 74  TLADYGIRSDNVV 87
           TLADY I+ ++ +
Sbjct: 96  TLADYNIQKESTL 108

[Close]

BLAST of Moc10g12640 vs. ExPASy Swiss-Prot
Match: Q3E7K8 (Polyubiquitin 12 OS=Arabidopsis thaliana OX=3702 GN=UBQ12 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 3.1e-06
Identity = 30/73 (41.10%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 14  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSE 73
           LR +  M+I ++    K + L V     I +LKAKI  +EGIP  Q+ L F G++LED  
Sbjct: 71  LRFRGGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130

Query: 74  TLADYGIRSDNVV 87
           TLADY I+ ++ +
Sbjct: 131 TLADYNIQKESTL 143

[Close]

BLAST of Moc10g12640 vs. ExPASy Swiss-Prot
Match: P0CH27 (Ubiquitin-60S ribosomal protein L40 OS=Trypanosoma cruzi OX=5693 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 4.1e-06
Identity = 29/73 (39.73%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 14  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSE 73
           LR +  M+I ++    K + L V     I ++KAKI  +EGIP  Q+ L F G++LED  
Sbjct: 71  LRLRGGMQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130

Query: 74  TLADYGIRSDNVV 87
           TLADY I+ ++ +
Sbjct: 131 TLADYNIQKESTL 143

[Close]

BLAST of Moc10g12640 vs. ExPASy TrEMBL
Match: A0A5D3BMH5 (Polyubiquitin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00560 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.0e-07
Identity = 38/82 (46.34%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 1   MNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQK 60
           M+ KLRRKWLI+KLRP+ +M+I ++    + + L V     I D+KAKI A+EG P QQ+
Sbjct: 54  MDAKLRRKWLIKKLRPQPEMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAKEGYPQQQQ 113

Query: 61  VLNFQGRRLEDSETLADYGIRS 83
            L F G +L+D  TL   G+ S
Sbjct: 114 RLVFNGWKLDDDRTLGSCGLWS 135

[Close]

BLAST of Moc10g12640 vs. ExPASy TrEMBL
Match: A0A1S3CKU5 (polyubiquitin-like OS=Cucumis melo OX=3656 GN=LOC103501609 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.0e-07
Identity = 38/82 (46.34%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 1   MNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQK 60
           M+ KLRRKWLI+KLRP+ +M+I ++    + + L V     I D+KAKI A+EG P QQ+
Sbjct: 54  MDAKLRRKWLIKKLRPQPEMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAKEGYPQQQQ 113

Query: 61  VLNFQGRRLEDSETLADYGIRS 83
            L F G +L+D  TL   G+ S
Sbjct: 114 RLVFNGWKLDDDRTLGSCGLWS 135

[Close]

BLAST of Moc10g12640 vs. ExPASy TrEMBL
Match: A0A6J1DL46 (ubiquitin-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022115 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.5e-06
Identity = 34/88 (38.64%), Postives = 53/88 (60.23%), Query Frame = 0


Query: 1   MNDKLRRKWLIRKLRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQK 60
           ++ KLR++WL+R L    +M+I +++   K +   +     I  +KAKI A EG P  Q+
Sbjct: 50  LDRKLRKRWLLRNLPRSGQMQINVKMLTGKTLCFEILASNTIDVVKAKIEAMEGYPPDQQ 109

Query: 61  VLNFQGRRLEDSETLADYGIRSDNVVCM 89
            L + GR+LED  TLA+Y IRS + + M
Sbjct: 110 RLIYGGRQLEDGRTLAEYNIRSGSTLHM 137

[Close]

BLAST of Moc10g12640 vs. ExPASy TrEMBL
Match: A0A0D2VG82 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_013G163500 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 6.1e-05
Identity = 31/74 (41.89%), Postives = 45/74 (60.81%), Query Frame = 0


Query: 14  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSE 73
           LR +  M+I ++    K + L V     I ++KAKI  +EGIP  Q+ L F G++LED  
Sbjct: 299 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358

Query: 74  TLADYGIRSDNVVC 88
           TLADY I+ +N +C
Sbjct: 359 TLADYNIQKENPLC 372

[Close]

BLAST of Moc10g12640 vs. ExPASy TrEMBL
Match: S5G9A4 (Ac-v-ubi OS=Autographa californica nuclear polyhedrosis virus OX=46015 GN=Ac-v-ubi PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 8.0e-05
Identity = 27/69 (39.13%), Postives = 44/69 (63.77%), Query Frame = 0


Query: 20 MKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYG 79
          M+I ++    K +         +ADLK KIA +EG+P+ Q+ L F G++LEDS+T+ADY 
Sbjct: 1  MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 60

Query: 80 IRSDNVVCM 89
          I+ ++ + M
Sbjct: 61 IQKESTLHM 69

[Close]

BLAST of Moc10g12640 vs. TAIR 10
Match: AT1G53930.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 53.5 bits (127), Expect = 9.9e-08
Identity = 27/67 (40.30%), Postives = 45/67 (67.16%), Query Frame = 0


Query: 20  MKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSETLADYG 79
           M I ++    + +VL V     I ++KAKI  ++GIP+ Q+ L F+G++LED  TLADY 
Sbjct: 86  MFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYN 145

Query: 80  IRSDNVV 87
           I++D+++
Sbjct: 146 IQNDSIL 152

[Close]

BLAST of Moc10g12640 vs. TAIR 10
Match: AT1G55060.1 (ubiquitin 12 )

HSP 1 Score: 52.4 bits (124), Expect = 2.2e-07
Identity = 30/73 (41.10%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 14  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSE 73
           LR +  M+I ++    K + L V     I +LKAKI  +EGIP  Q+ L F G++LED  
Sbjct: 71  LRFRGGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130

Query: 74  TLADYGIRSDNVV 87
           TLADY I+ ++ +
Sbjct: 131 TLADYNIQKESTL 143

[Close]

BLAST of Moc10g12640 vs. TAIR 10
Match: AT4G05320.2 (polyubiquitin 10 )

HSP 1 Score: 51.6 bits (122), Expect = 3.8e-07
Identity = 29/73 (39.73%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 14  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSE 73
           LR +  M+I ++    K + L V     I ++KAKI  +EGIP  Q+ L F G++LED  
Sbjct: 71  LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130

Query: 74  TLADYGIRSDNVV 87
           TLADY I+ ++ +
Sbjct: 131 TLADYNIQKESTL 143

[Close]

BLAST of Moc10g12640 vs. TAIR 10
Match: AT4G02890.1 (Ubiquitin family protein )

HSP 1 Score: 51.6 bits (122), Expect = 3.8e-07
Identity = 29/73 (39.73%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 14  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSE 73
           LR +  M+I ++    K + L V     I ++KAKI  +EGIP  Q+ L F G++LED  
Sbjct: 71  LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130

Query: 74  TLADYGIRSDNVV 87
           TLADY I+ ++ +
Sbjct: 131 TLADYNIQKESTL 143

[Close]

BLAST of Moc10g12640 vs. TAIR 10
Match: AT4G05050.1 (ubiquitin 11 )

HSP 1 Score: 51.6 bits (122), Expect = 3.8e-07
Identity = 29/73 (39.73%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 14  LRPKDKMKICLRVAINKVVVLWVWRLYMIADLKAKIAAEEGIPIQQKVLNFQGRRLEDSE 73
           LR +  M+I ++    K + L V     I ++KAKI  +EGIP  Q+ L F G++LED  
Sbjct: 71  LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130

Query: 74  TLADYGIRSDNVV 87
           TLADY I+ ++ +
Sbjct: 131 TLADYNIQKESTL 143

The following BLAST results are available for this feature:

BLAST of Moc10g12640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463442.1	2.1e-07	46.34	PREDICTED: polyubiquitin-like [Cucumis melo] >KAA0025478.1 polyubiquitin-like [C...	[more]
KAG2582037.1	5.1e-06	44.44	hypothetical protein PVAP13_6KG092800 [Panicum virgatum]	[more]
XP_022154970.1	1.1e-05	38.64	ubiquitin-like isoform X1 [Momordica charantia] >XP_022154971.1 ubiquitin-like i...	[more]
CAD6225216.1	3.3e-05	44.29	unnamed protein product [Miscanthus lutarioriparius]	[more]
CAE8715441.1	5.6e-05	40.85	unnamed protein product, partial [Polarella glacialis]	[more]

BLAST of Moc10g12640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P16709	2.2e-07	39.13	viral Ubiquitin OS=Autographa californica nuclear polyhedrosis virus OX=46015 GN...	[more]
P0CG71	2.4e-06	39.73	Polyubiquitin-A OS=Caenorhabditis elegans OX=6239 GN=ubq-1 PE=3 SV=1	[more]
P69315	2.4e-06	41.10	Polyubiquitin (Fragment) OS=Linum usitatissimum OX=4006 PE=3 SV=2	[more]
Q3E7K8	3.1e-06	41.10	Polyubiquitin 12 OS=Arabidopsis thaliana OX=3702 GN=UBQ12 PE=3 SV=1	[more]
P0CH27	4.1e-06	39.73	Ubiquitin-60S ribosomal protein L40 OS=Trypanosoma cruzi OX=5693 PE=2 SV=1	[more]

BLAST of Moc10g12640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BMH5	1.0e-07	46.34	Polyubiquitin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G...	[more]
A0A1S3CKU5	1.0e-07	46.34	polyubiquitin-like OS=Cucumis melo OX=3656 GN=LOC103501609 PE=4 SV=1	[more]
A0A6J1DL46	5.5e-06	38.64	ubiquitin-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022115 PE=4 SV...	[more]
A0A0D2VG82	6.1e-05	41.89	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_013G163500 PE=4 ...	[more]
S5G9A4	8.0e-05	39.13	Ac-v-ubi OS=Autographa californica nuclear polyhedrosis virus OX=46015 GN=Ac-v-u...	[more]

BLAST of Moc10g12640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53930.1	9.9e-08	40.30	Ubiquitin-like superfamily protein	[more]
AT1G55060.1	2.2e-07	41.10	ubiquitin 12	[more]
AT4G05320.2	3.8e-07	39.73	polyubiquitin 10	[more]
AT4G02890.1	3.8e-07	39.73	Ubiquitin family protein	[more]
AT4G05050.1	3.8e-07	39.73	ubiquitin 11	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019956	Ubiquitin domain	PRINTS	PR00348	UBIQUITIN	coord: 51..71 score: 50.17 coord: 30..50 score: 34.94 coord: 72..89 score: 23.85
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 22..88 e-value: 8.4E-6 score: 35.3
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 41..88 e-value: 1.4E-13 score: 50.4
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 20..89 score: 15.993241
None	No IPR available	GENE3D	3.10.20.90		coord: 10..89 e-value: 2.2E-15 score: 58.1
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 11..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g12640.1	Moc10g12640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding