Moc10g09960 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g09960
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ubiquitin domain-containing protein
Location	chr10: 7573904 .. 7576433 (-)
RNA-Seq Expression	Moc10g09960
Synteny	Moc10g09960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATGTGCTGGATCGTCGCGGACCAACGGAGACGGTGAGGTTTCTTCACTTCTGTATTTCCTCTTTTTGATTCTTGGAGAGATTTTTGTTGTATGTTCGGCTGCTGGCTTGGATACGGGGAGTATTAGGTGATTATCAATGCAAGTTGGTTTGGTAGTTTTTAATTTGTTGCGGCTGTTTTCTCGATATTCTTTCTGCGGTTATGACGTTTCTTGATGGTGTGCTTTGGTTCGAGATTCTTGAACTTCACTTGTGGTTTAGTAGTAGTGCGTTCATTAGGATAAGAAGTTCTCGAACTCGGATGATTAAGTTAGTGTGAGGAAATTCTTTATTTGTTTTGAGAAGGACGGATTTCTGAAGGTTGCTTAAAGTTACTTCTCGCTGGTTTGTTGACATTGTTGTTGTCAGGAAAACGAACTCAGTTACATTTTCTGCTGGTGATTCAAATTCCACTAGGGATTGATTCTTTTAGAACGAAATTATCGAGGATTGCAGTTGGAATCTTGGCATATTTGTGCCTGAAAACTTCTTGCCGTATCGTATTCAAAGAATTTGATTGATTAGTTGAGGGTGTAATATTAGCATATGTATGAATAAAAATTTAAACTAACAAAAGATGGTCAGATATCTCATATTTCTGCTTTTATACTGAAATTTTGTTGATGCTATGCTGCGTTTAGAAGTTAGGACATGCTAATTTGTGGAATGTTAGTTGTCTTTCGACTCTTTTCTAGATATCTTCAGAATGTCAAAGGTAATAGCCATTGGCTTAAAATGGGAACAAAACTCTTATGGGGATACTGAAATGGAAAGGAAGCACTGCAAAAGAGAAAAGGGAAGGAAAGAGAAAATAGAAAAATTTTAGGATGAAGTTTTCTAATTCTTCAATGTTCGAAGTACTGGAGGTTATAATTTTAGTTGAACTTTACAAGGCCACCCTTTGTTACCAATGCTGCCAGGCCTGAATCTAGTGTTGTTGGTTTATACTTCATCCAAGACATTAACATATGACTGAAACTGCTTCTTTATTTAGGATCCACAAAGAGGATACGCAAGCCAAAACCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTCATGCAACTGCGGGATGAATTTTGGGACACTGCACCCCACTATGGTGGCCGAAATGGTAGTCCTGTCTCTAACATATTTTTGCCAGTGTTAAAGTCTTTGTGATTTAAGGTTACCTGATCGCAGAAATTACTAAGAGTTTAATTAATTAGGAATAGGTCTGCAATATTATATCTTACCCAGGAAGCATCTCGTGATTTCTGATGTCGAAATCCACTTTTCTTTCTTGAGGAAAAATGTAAAACTAAGGATAGATGACTGATCATCCATGGAAAAGGGAGACTACGGTAGTTGCAGGGGATCAAGGGTCTGGATGAATTATCCTCTTGTAAATGACAATGATATGTTACAAACATGACACGCGTATAGGAACAATTATTGGATTTATTTCCAATATCTAGGATCCTTACATTTTTTTTTCCTATTTCCTATTAGATTAAGTTCTTCAATTTGGAGAGATAAGGTTTCCTATTTTTATGTTGATTCCAAATTGATGTTTCCAAATCAAGATCTTAATGAAAGCCATTGGGAATTGCCAGAAAATTTTGAAGTGTCCTCCCTTGTTTAAATTTATTTTCCCTCATAAGGCATTAGCAGTCTTATTTTTATGAAACTTTCTACTTTCACTGTCCCCCACAACTGACTGTTATGCCATTGTATAATGAGAGGGCACAAGTATTTAGTTTTTCTGAAAGTCGAGGCCTAAAAATCTGAATTTGGAAGGCAGGATTCTAAATCGAGAAAAACAGAGAGGATCAAAGAAAAGTAGTGAAGGAGAATATTCTAAACACAGTAGGATTTACAAGAAAAAAAGCCACTAGGATCCTTACCCTAAACTCTCCGATTTATAAGAGTAATAAAGATCAGAAACCTTGAGATTCCTTCTAAAAGACAAATCTTGAGAAACGTGTGAGTACTAAATATTCAGTCCTCTGGGAGCGGAGGTTCAAACCCCACCCTCAAATAAATAAATAAATAAAATAAAGATTTAGGCCAAACAGTCGTGATCTGAAAATTGTGTCGAAGACCATGAAAGATTCTGAGACGATTTGGAAGTGAGAAAAACTTCTAAAAATGGGAATCCAAGAATTTTGCTCACTTTAAACTCATCTCAGAATATTTCAATGAAAATTTTACTAACTGTTTTTGGTTGATTCCAGAGATTTGGGATGCACTACGGGCAGCTGCTGAAGCTGAACCATCTCTTGCGCAAGCAATTATCGACAGCGCTGGGGTCATTGTTCAAAATGCAGATTTGACGGTCTGTTACGATGAGAGAGGTCCTTATCATTTCCTCATTTAAGAAATTATTATTATCATATGCTATCTTAGTTCAATCATCAATATTATTTTATCCTCAGGCGCAAAATATGAACTGCCCAACTATGTTTTGAGTGAGCCAACCAATTTGATTCGCGACAGTTCATAA

mRNA sequence

ATGGGATGTGCTGGATCGTCGCGGACCAACGGAGACGGTGAGGTTTCTTCACTTCTGTATTTCCTCTTTTTGATTCTTGGAGAGATTTTTGTTGTATGTTCGGCTGCTGGCTTGGATACGGGGAGTATTAGATATCTTCAGAATGTCAAAGGATCCACAAAGAGGATACGCAAGCCAAAACCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTCATGCAACTGCGGGATGAATTTTGGGACACTGCACCCCACTATGGTGGCCGAAATGAGATTTGGGATGCACTACGGGCAGCTGCTGAAGCTGAACCATCTCTTGCGCAAGCAATTATCGACAGCGCTGGGGTCATTGTTCAAAATGCAGATTTGACGGTCTGTTACGATGAGAGAGGCGCAAAATATGAACTGCCCAACTATGTTTTGAGTGAGCCAACCAATTTGATTCGCGACAGTTCATAA

Coding sequence (CDS)

ATGGGATGTGCTGGATCGTCGCGGACCAACGGAGACGGTGAGGTTTCTTCACTTCTGTATTTCCTCTTTTTGATTCTTGGAGAGATTTTTGTTGTATGTTCGGCTGCTGGCTTGGATACGGGGAGTATTAGATATCTTCAGAATGTCAAAGGATCCACAAAGAGGATACGCAAGCCAAAACCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTCATGCAACTGCGGGATGAATTTTGGGACACTGCACCCCACTATGGTGGCCGAAATGAGATTTGGGATGCACTACGGGCAGCTGCTGAAGCTGAACCATCTCTTGCGCAAGCAATTATCGACAGCGCTGGGGTCATTGTTCAAAATGCAGATTTGACGGTCTGTTACGATGAGAGAGGCGCAAAATATGAACTGCCCAACTATGTTTTGAGTGAGCCAACCAATTTGATTCGCGACAGTTCATAA

Protein sequence

MGCAGSSRTNGDGEVSSLLYFLFLILGEIFVVCSAAGLDTGSIRYLQNVKGSTKRIRKPKPWKHPQPITRSQLMQLRDEFWDTAPHYGGRNEIWDALRAAAEAEPSLAQAIIDSAGVIVQNADLTVCYDERGAKYELPNYVLSEPTNLIRDSS

Homology

[Close]

BLAST of Moc10g09960 vs. NCBI nr
Match: XP_022142761.1 (ubiquitin domain-containing protein 1-like [Momordica charantia] >XP_022142762.1 ubiquitin domain-containing protein 1-like [Momordica charantia])

HSP 1 Score: 219.2 bits (557), Expect = 2.5e-53
Identity = 114/153 (74.51%), Postives = 114/153 (74.51%), Query Frame = 0


Query: 1   MGCAGSSRTNGDGEVSSLLYFLFLILGEIFVVCSAAGLDTGSIRYLQNVKGSTKRIRKPK 60
           MGCAGSSRTNGD                                      GSTKRIRKPK
Sbjct: 1   MGCAGSSRTNGD--------------------------------------GSTKRIRKPK 60

Query: 61  PWKHPQPITRSQLMQLRDEFWDTAPHYGGRNEIWDALRAAAEAEPSLAQAIIDSAGVIVQ 120
           PWKHPQPITRSQLMQLRDEFWDTAPHYGGRNEIWDALRAAAEAE SLAQAIIDSAGVIVQ
Sbjct: 61  PWKHPQPITRSQLMQLRDEFWDTAPHYGGRNEIWDALRAAAEAEXSLAQAIIDSAGVIVQ 115

Query: 121 NADLTVCYDERGAKYELPNYVLSEPTNLIRDSS 154
           NADLTVCYDERGAKYELPNYVLSEPTNLIRDSS
Sbjct: 121 NADLTVCYDERGAKYELPNYVLSEPTNLIRDSS 115

[Close]

BLAST of Moc10g09960 vs. NCBI nr
Match: XP_022942916.1 (ubiquitin domain-containing protein 1-like [Cucurbita moschata] >XP_022983339.1 ubiquitin domain-containing protein 1-like isoform X2 [Cucurbita maxima] >XP_023527305.1 ubiquitin domain-containing protein 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 209.5 bits (532), Expect = 2.0e-50
Identity = 109/153 (71.24%), Postives = 111/153 (72.55%), Query Frame = 0


Query: 1   MGCAGSSRTNGDGEVSSLLYFLFLILGEIFVVCSAAGLDTGSIRYLQNVKGSTKRIRKPK 60
           MGC GSS+TNGD                                      GSTK+IRKPK
Sbjct: 1   MGCVGSSQTNGD--------------------------------------GSTKKIRKPK 60

Query: 61  PWKHPQPITRSQLMQLRDEFWDTAPHYGGRNEIWDALRAAAEAEPSLAQAIIDSAGVIVQ 120
           PWKHPQPITRSQL QLRDEFWDTAPHYGGRNEIWDALRAAAEAE SLAQAIIDSAGVIVQ
Sbjct: 61  PWKHPQPITRSQLTQLRDEFWDTAPHYGGRNEIWDALRAAAEAELSLAQAIIDSAGVIVQ 115

Query: 121 NADLTVCYDERGAKYELPNYVLSEPTNLIRDSS 154
           NADLTVCYDERGAKYELP YVLSEPTNLIRDSS
Sbjct: 121 NADLTVCYDERGAKYELPKYVLSEPTNLIRDSS 115

[Close]

BLAST of Moc10g09960 vs. NCBI nr
Match: XP_038882682.1 (ubiquitin domain-containing protein 2-like [Benincasa hispida] >XP_038882691.1 ubiquitin domain-containing protein 2-like [Benincasa hispida] >XP_038882701.1 ubiquitin domain-containing protein 2-like [Benincasa hispida] >XP_038882708.1 ubiquitin domain-containing protein 2-like [Benincasa hispida])

HSP 1 Score: 207.6 bits (527), Expect = 7.6e-50
Identity = 108/153 (70.59%), Postives = 111/153 (72.55%), Query Frame = 0


Query: 1   MGCAGSSRTNGDGEVSSLLYFLFLILGEIFVVCSAAGLDTGSIRYLQNVKGSTKRIRKPK 60
           MGCAGSS+TNGD                                      GS K+IRKPK
Sbjct: 1   MGCAGSSQTNGD--------------------------------------GSIKKIRKPK 60

Query: 61  PWKHPQPITRSQLMQLRDEFWDTAPHYGGRNEIWDALRAAAEAEPSLAQAIIDSAGVIVQ 120
            WKHPQPITRSQLMQLRDEFWDTAPHYGGR EIWDALRAAAEAE SLAQAIIDSAGVIVQ
Sbjct: 61  SWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQ 115

Query: 121 NADLTVCYDERGAKYELPNYVLSEPTNLIRDSS 154
           NADLT+CYDERGAKYELPNYVLSEPTNLIRDSS
Sbjct: 121 NADLTICYDERGAKYELPNYVLSEPTNLIRDSS 115

[Close]

BLAST of Moc10g09960 vs. NCBI nr
Match: KAG6577030.1 (Ubiquitin domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 205.7 bits (522), Expect = 2.9e-49
Identity = 112/164 (68.29%), Postives = 122/164 (74.39%), Query Frame = 0


Query: 1   MGCAGSSRTNGDGEVSSLLYFLFLILGEI---------FVVCSAAGLD--TGSIRYLQNV 60
           MGCAGSS+TNGDG +      L     E          F + +   LD     I  L  V
Sbjct: 1   MGCAGSSQTNGDGILDDNQCKLICCGRESGSVGLVVLNFSIMNWIALDFIYSVIALLDGV 60

Query: 61  KGSTKRIRKPKPWKHPQPITRSQLMQLRDEFWDTAPHYGGRNEIWDALRAAAEAEPSLAQ 120
           + S K+I KPK WKHPQPITRSQL+QLR+EFWDTAPHYGGR EIWDALRAAAEAE SLAQ
Sbjct: 61  R-SIKKICKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQ 120

Query: 121 AIIDSAGVIVQNADLTVCYDERGAKYELPNYVLSEPTNLIRDSS 154
           AIIDSAGVI+QNADLT+CYDERGAKYELPNYVLSEPTNLIRDSS
Sbjct: 121 AIIDSAGVIIQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS 163

[Close]

BLAST of Moc10g09960 vs. NCBI nr
Match: XP_022931411.1 (ubiquitin domain-containing protein 2-like [Cucurbita moschata])

HSP 1 Score: 204.1 bits (518), Expect = 8.4e-49
Identity = 105/153 (68.63%), Postives = 111/153 (72.55%), Query Frame = 0


Query: 1   MGCAGSSRTNGDGEVSSLLYFLFLILGEIFVVCSAAGLDTGSIRYLQNVKGSTKRIRKPK 60
           MGCAGSS+TNGD                                      GS K+IRKPK
Sbjct: 1   MGCAGSSQTNGD--------------------------------------GSIKKIRKPK 60

Query: 61  PWKHPQPITRSQLMQLRDEFWDTAPHYGGRNEIWDALRAAAEAEPSLAQAIIDSAGVIVQ 120
            WKHPQPITRSQL+QLR+EFWDTAPHYGGR EIWDALRAAAEAE SLAQAIIDSAGVI+Q
Sbjct: 61  SWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQ 115

Query: 121 NADLTVCYDERGAKYELPNYVLSEPTNLIRDSS 154
           NADLT+CYDERGAKYELPNYVLSEPTNLIRDSS
Sbjct: 121 NADLTICYDERGAKYELPNYVLSEPTNLIRDSS 115

[Close]

BLAST of Moc10g09960 vs. ExPASy Swiss-Prot
Match: Q6DG43 (Ubiquitin domain-containing protein 2 OS=Danio rerio OX=7955 GN=ubtd2 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.7e-23
Identity = 55/108 (50.93%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 51  GSTKRIRKPKP-WKHPQPITRSQLMQLRDEFWDTAPHYGGRNEIWDALRAAAEA----EP 110
           G  + +++ KP WK   P+T  QL   RDEFWDTAP + GR EIWDAL+AAA+A    + 
Sbjct: 27  GRNQPLKREKPKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAQAFESNDH 86

Query: 111 SLAQAIIDSAGVIVQNADLTVCYDERGAKYELPNYVLSEPTNLIRDSS 154
            LAQAIID A + + +  LT CYDE G +Y+LP Y LS P N+I + S
Sbjct: 87  ELAQAIIDGASITLPHGALTECYDELGNRYQLPVYCLSPPVNMIEEKS 134

[Close]

BLAST of Moc10g09960 vs. ExPASy Swiss-Prot
Match: Q4V8W7 (Ubiquitin domain-containing protein 1 OS=Danio rerio OX=7955 GN=ubtd1 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.8e-23
Identity = 55/108 (50.93%), Postives = 70/108 (64.81%), Query Frame = 0


Query: 51  GSTKRIRKPKP-WKHPQPITRSQLMQLRDEFWDTAPHYGGRNEIWDALRAAAEA----EP 110
           G  + ++K KP WK   P+T  QL   RDEFWDTAP + GR EIWDAL+AAA A    + 
Sbjct: 25  GRNEPLKKDKPKWKSDYPMTEGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAVALECSDH 84

Query: 111 SLAQAIIDSAGVIVQNADLTVCYDERGAKYELPNYVLSEPTNLIRDSS 154
            LAQAI+D A + + +  LT CYDE G +Y+LP Y L+ P NLI + S
Sbjct: 85  ELAQAIVDGANITLPHGSLTECYDELGNRYQLPVYCLAPPVNLISERS 132

[Close]

BLAST of Moc10g09960 vs. ExPASy Swiss-Prot
Match: Q640W6 (Ubiquitin domain-containing protein 1 OS=Xenopus laevis OX=8355 GN=ubtd1 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 8.2e-23
Identity = 55/108 (50.93%), Postives = 70/108 (64.81%), Query Frame = 0


Query: 51  GSTKRIRKPKP-WKHPQPITRSQLMQLRDEFWDTAPHYGGRNEIWDALRAAAEA----EP 110
           G  + ++K KP WK   P+T  QL   RDEFWDTAP + GR EIWDAL+AAA A    + 
Sbjct: 27  GRNQPLKKDKPKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAHAFESNDH 86

Query: 111 SLAQAIIDSAGVIVQNADLTVCYDERGAKYELPNYVLSEPTNLIRDSS 154
            LAQAIID A + + +  LT CYDE G +Y+LP Y L+ P N+I + S
Sbjct: 87  ELAQAIIDGASITLPHGALTECYDELGNRYQLPVYCLAPPINMIEEKS 134

[Close]

BLAST of Moc10g09960 vs. ExPASy Swiss-Prot
Match: Q5EAE3 (Ubiquitin domain-containing protein 2 OS=Bos taurus OX=9913 GN=UBTD2 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 8.2e-23
Identity = 55/108 (50.93%), Postives = 70/108 (64.81%), Query Frame = 0


Query: 51  GSTKRIRKPKP-WKHPQPITRSQLMQLRDEFWDTAPHYGGRNEIWDALRAAAEA----EP 110
           G  + ++K KP WK   P+T  QL   RDEFWDTAP + GR EIWDAL+AAA A    + 
Sbjct: 27  GRNQPLKKEKPKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAHAFESNDH 86

Query: 111 SLAQAIIDSAGVIVQNADLTVCYDERGAKYELPNYVLSEPTNLIRDSS 154
            LAQAIID A + + +  LT CYDE G +Y+LP Y L+ P N+I + S
Sbjct: 87  ELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPPINMIEEKS 134

[Close]

BLAST of Moc10g09960 vs. ExPASy Swiss-Prot
Match: Q8WUN7 (Ubiquitin domain-containing protein 2 OS=Homo sapiens OX=9606 GN=UBTD2 PE=1 SV=2)

HSP 1 Score: 108.2 bits (269), Expect = 8.2e-23
Identity = 55/108 (50.93%), Postives = 70/108 (64.81%), Query Frame = 0


Query: 51  GSTKRIRKPKP-WKHPQPITRSQLMQLRDEFWDTAPHYGGRNEIWDALRAAAEA----EP 110
           G  + ++K KP WK   P+T  QL   RDEFWDTAP + GR EIWDAL+AAA A    + 
Sbjct: 27  GRNQPLKKEKPKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAHAFESNDH 86

Query: 111 SLAQAIIDSAGVIVQNADLTVCYDERGAKYELPNYVLSEPTNLIRDSS 154
            LAQAIID A + + +  LT CYDE G +Y+LP Y L+ P N+I + S
Sbjct: 87  ELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPPINMIEEKS 134

[Close]

BLAST of Moc10g09960 vs. ExPASy TrEMBL
Match: A0A6J1CN58 (ubiquitin domain-containing protein 1-like OS=Momordica charantia OX=3673 GN=LOC111012801 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.2e-53
Identity = 114/153 (74.51%), Postives = 114/153 (74.51%), Query Frame = 0


Query: 1   MGCAGSSRTNGDGEVSSLLYFLFLILGEIFVVCSAAGLDTGSIRYLQNVKGSTKRIRKPK 60
           MGCAGSSRTNGD                                      GSTKRIRKPK
Sbjct: 1   MGCAGSSRTNGD--------------------------------------GSTKRIRKPK 60

Query: 61  PWKHPQPITRSQLMQLRDEFWDTAPHYGGRNEIWDALRAAAEAEPSLAQAIIDSAGVIVQ 120
           PWKHPQPITRSQLMQLRDEFWDTAPHYGGRNEIWDALRAAAEAE SLAQAIIDSAGVIVQ
Sbjct: 61  PWKHPQPITRSQLMQLRDEFWDTAPHYGGRNEIWDALRAAAEAEXSLAQAIIDSAGVIVQ 115

Query: 121 NADLTVCYDERGAKYELPNYVLSEPTNLIRDSS 154
           NADLTVCYDERGAKYELPNYVLSEPTNLIRDSS
Sbjct: 121 NADLTVCYDERGAKYELPNYVLSEPTNLIRDSS 115

[Close]

BLAST of Moc10g09960 vs. ExPASy TrEMBL
Match: A0A6J1J725 (ubiquitin domain-containing protein 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481944 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 9.7e-51
Identity = 109/153 (71.24%), Postives = 111/153 (72.55%), Query Frame = 0


Query: 1   MGCAGSSRTNGDGEVSSLLYFLFLILGEIFVVCSAAGLDTGSIRYLQNVKGSTKRIRKPK 60
           MGC GSS+TNGD                                      GSTK+IRKPK
Sbjct: 1   MGCVGSSQTNGD--------------------------------------GSTKKIRKPK 60

Query: 61  PWKHPQPITRSQLMQLRDEFWDTAPHYGGRNEIWDALRAAAEAEPSLAQAIIDSAGVIVQ 120
           PWKHPQPITRSQL QLRDEFWDTAPHYGGRNEIWDALRAAAEAE SLAQAIIDSAGVIVQ
Sbjct: 61  PWKHPQPITRSQLTQLRDEFWDTAPHYGGRNEIWDALRAAAEAELSLAQAIIDSAGVIVQ 115

Query: 121 NADLTVCYDERGAKYELPNYVLSEPTNLIRDSS 154
           NADLTVCYDERGAKYELP YVLSEPTNLIRDSS
Sbjct: 121 NADLTVCYDERGAKYELPKYVLSEPTNLIRDSS 115

[Close]

BLAST of Moc10g09960 vs. ExPASy TrEMBL
Match: A0A6J1FQA3 (ubiquitin domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111447800 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 9.7e-51
Identity = 109/153 (71.24%), Postives = 111/153 (72.55%), Query Frame = 0


Query: 1   MGCAGSSRTNGDGEVSSLLYFLFLILGEIFVVCSAAGLDTGSIRYLQNVKGSTKRIRKPK 60
           MGC GSS+TNGD                                      GSTK+IRKPK
Sbjct: 1   MGCVGSSQTNGD--------------------------------------GSTKKIRKPK 60

Query: 61  PWKHPQPITRSQLMQLRDEFWDTAPHYGGRNEIWDALRAAAEAEPSLAQAIIDSAGVIVQ 120
           PWKHPQPITRSQL QLRDEFWDTAPHYGGRNEIWDALRAAAEAE SLAQAIIDSAGVIVQ
Sbjct: 61  PWKHPQPITRSQLTQLRDEFWDTAPHYGGRNEIWDALRAAAEAELSLAQAIIDSAGVIVQ 115

Query: 121 NADLTVCYDERGAKYELPNYVLSEPTNLIRDSS 154
           NADLTVCYDERGAKYELP YVLSEPTNLIRDSS
Sbjct: 121 NADLTVCYDERGAKYELPKYVLSEPTNLIRDSS 115

[Close]

BLAST of Moc10g09960 vs. ExPASy TrEMBL
Match: A0A6J1ETK8 (ubiquitin domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111437602 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 4.1e-49
Identity = 105/153 (68.63%), Postives = 111/153 (72.55%), Query Frame = 0


Query: 1   MGCAGSSRTNGDGEVSSLLYFLFLILGEIFVVCSAAGLDTGSIRYLQNVKGSTKRIRKPK 60
           MGCAGSS+TNGD                                      GS K+IRKPK
Sbjct: 1   MGCAGSSQTNGD--------------------------------------GSIKKIRKPK 60

Query: 61  PWKHPQPITRSQLMQLRDEFWDTAPHYGGRNEIWDALRAAAEAEPSLAQAIIDSAGVIVQ 120
            WKHPQPITRSQL+QLR+EFWDTAPHYGGR EIWDALRAAAEAE SLAQAIIDSAGVI+Q
Sbjct: 61  SWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQ 115

Query: 121 NADLTVCYDERGAKYELPNYVLSEPTNLIRDSS 154
           NADLT+CYDERGAKYELPNYVLSEPTNLIRDSS
Sbjct: 121 NADLTICYDERGAKYELPNYVLSEPTNLIRDSS 115

[Close]

BLAST of Moc10g09960 vs. ExPASy TrEMBL
Match: A0A0A0KVJ9 (UBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G083480 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 5.9e-48
Identity = 104/153 (67.97%), Postives = 108/153 (70.59%), Query Frame = 0


Query: 1   MGCAGSSRTNGDGEVSSLLYFLFLILGEIFVVCSAAGLDTGSIRYLQNVKGSTKRIRKPK 60
           MGCAGSS+T  D                                      GS K+IRKPK
Sbjct: 1   MGCAGSSQTKAD--------------------------------------GSIKKIRKPK 60

Query: 61  PWKHPQPITRSQLMQLRDEFWDTAPHYGGRNEIWDALRAAAEAEPSLAQAIIDSAGVIVQ 120
            WKHPQPITRSQL QLRDEFWDTAPHYGGR EIWDALRAAAEAE SLAQAI+DSAGVIVQ
Sbjct: 61  SWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIVDSAGVIVQ 115

Query: 121 NADLTVCYDERGAKYELPNYVLSEPTNLIRDSS 154
           NADLT+CYDERGAKYELPNYVLSEPTNLIRDSS
Sbjct: 121 NADLTICYDERGAKYELPNYVLSEPTNLIRDSS 115

[Close]

BLAST of Moc10g09960 vs. TAIR 10
Match: AT1G53400.1 (Ubiquitin domain-containing protein )

HSP 1 Score: 181.8 bits (460), Expect = 4.2e-46
Identity = 84/98 (85.71%), Postives = 92/98 (93.88%), Query Frame = 0


Query: 51  GSTKRIRKPKPWKHPQPITRSQLMQLRDEFWDTAPHYGGRNEIWDALRAAAEAEPSLAQA 110
           GS K+IRKPKPWKH QPIT+++LM+LR+EFWDTAPHYGGR EIWDALRAAAEA+ SLAQA
Sbjct: 13  GSVKKIRKPKPWKHTQPITKAELMKLREEFWDTAPHYGGRKEIWDALRAAAEADISLAQA 72

Query: 111 IIDSAGVIVQNADLTVCYDERGAKYELPNYVLSEPTNL 149
           I+DSAGVIVQN DLTVCYDERGAKYELP YVLSEPTNL
Sbjct: 73  IVDSAGVIVQNTDLTVCYDERGAKYELPKYVLSEPTNL 110

[Close]

BLAST of Moc10g09960 vs. TAIR 10
Match: AT5G45740.1 (Ubiquitin domain-containing protein )

HSP 1 Score: 163.7 bits (413), Expect = 1.2e-40
Identity = 73/98 (74.49%), Postives = 87/98 (88.78%), Query Frame = 0


Query: 54  KRIRKPKPWKHPQPITRSQLMQLRDEFWDTAPHYGGRNEIWDALRAAAEAEPSLAQAIID 113
           K+I KPKPW H +PITR+QL  +R+EFWDT+PHYGG+ EIW+ALRAAAEA+  LAQ I+D
Sbjct: 18  KKIMKPKPWAHTEPITRAQLTNMREEFWDTSPHYGGQREIWEALRAAAEADLKLAQTIVD 77

Query: 114 SAGVIVQNADLTVCYDERGAKYELPNYVLSEPTNLIRD 152
           SAGVIVQN DLT+C+DERGA+YELP YVLSEPTNLIR+
Sbjct: 78  SAGVIVQNRDLTLCWDERGARYELPRYVLSEPTNLIRE 115

[Close]

BLAST of Moc10g09960 vs. TAIR 10
Match: AT1G16960.1 (Ubiquitin domain-containing protein )

HSP 1 Score: 159.5 bits (402), Expect = 2.2e-39
Identity = 71/101 (70.30%), Postives = 88/101 (87.13%), Query Frame = 0


Query: 50  KGSTKRIRKPKPWKHPQPITRSQLMQLRDEFWDTAPHYGGRNEIWDALRAAAEAEP-SLA 109
           +G  ++IR+PK WKHPQPI+R +L Q+R+EFWDTAPHYGG+ EIWDALRAAAE +  SLA
Sbjct: 11  EGKKEKIRRPKTWKHPQPISRDELTQMREEFWDTAPHYGGKKEIWDALRAAAEEDDLSLA 70

Query: 110 QAIIDSAGVIVQNADLTVCYDERGAKYELPNYVLSEPTNLI 150
           Q I++SAGVIVQN DLT+CYDE+G+KYELP YVL +P+NLI
Sbjct: 71  QTILESAGVIVQNTDLTICYDEKGSKYELPKYVLRDPSNLI 111

The following BLAST results are available for this feature:

BLAST of Moc10g09960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142761.1	2.5e-53	74.51	ubiquitin domain-containing protein 1-like [Momordica charantia] >XP_022142762.1...	[more]
XP_022942916.1	2.0e-50	71.24	ubiquitin domain-containing protein 1-like [Cucurbita moschata] >XP_022983339.1 ...	[more]
XP_038882682.1	7.6e-50	70.59	ubiquitin domain-containing protein 2-like [Benincasa hispida] >XP_038882691.1 u...	[more]
KAG6577030.1	2.9e-49	68.29	Ubiquitin domain-containing protein 2, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022931411.1	8.4e-49	68.63	ubiquitin domain-containing protein 2-like [Cucurbita moschata]	[more]

BLAST of Moc10g09960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DG43	3.7e-23	50.93	Ubiquitin domain-containing protein 2 OS=Danio rerio OX=7955 GN=ubtd2 PE=2 SV=1	[more]
Q4V8W7	4.8e-23	50.93	Ubiquitin domain-containing protein 1 OS=Danio rerio OX=7955 GN=ubtd1 PE=2 SV=1	[more]
Q640W6	8.2e-23	50.93	Ubiquitin domain-containing protein 1 OS=Xenopus laevis OX=8355 GN=ubtd1 PE=2 SV...	[more]
Q5EAE3	8.2e-23	50.93	Ubiquitin domain-containing protein 2 OS=Bos taurus OX=9913 GN=UBTD2 PE=2 SV=1	[more]
Q8WUN7	8.2e-23	50.93	Ubiquitin domain-containing protein 2 OS=Homo sapiens OX=9606 GN=UBTD2 PE=1 SV=2	[more]

BLAST of Moc10g09960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CN58	1.2e-53	74.51	ubiquitin domain-containing protein 1-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1J725	9.7e-51	71.24	ubiquitin domain-containing protein 1-like isoform X2 OS=Cucurbita maxima OX=366...	[more]
A0A6J1FQA3	9.7e-51	71.24	ubiquitin domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1ETK8	4.1e-49	68.63	ubiquitin domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A0A0KVJ9	5.9e-48	67.97	UBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G083480 PE=4 SV...	[more]

BLAST of Moc10g09960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53400.1	4.2e-46	85.71	Ubiquitin domain-containing protein	[more]
AT5G45740.1	1.2e-40	74.49	Ubiquitin domain-containing protein	[more]
AT1G16960.1	2.2e-39	70.30	Ubiquitin domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032752	DC-UbP/UBTD2, N-terminal domain	PFAM	PF16455	UBD	coord: 54..151 e-value: 3.6E-34 score: 117.0
IPR038169	DC-UbP/UBTD2, N-terminal domain superfamily	GENE3D	1.20.225.20		coord: 69..142 e-value: 2.3E-26 score: 93.8
None	No IPR available	PANTHER	PTHR13609:SF25	BINDING PROTEIN, PUTATIVE-RELATED	coord: 51..150
IPR039869	Ubiquitin domain-containing protein 1/2	PANTHER	PTHR13609	UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED	coord: 51..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g09960.1	Moc10g09960.1	mRNA