Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGAATCAGACCGACGTCGTCGGTTGTGGCGGTTGTGTGGGTGGTGCTGGCGGTGGCGGTGGGCGTGGAGAAATGCATGGGGTGGGAGGAGACGGTGCAAGACGTGAAGAGTAAAATAACCCAAATGTCGGATGACGCAAATATTCCTGAAAAGGCAGAGGCCGTTAAGGAAGGCGCCGCTGGAGTTTTCCATGACGCCAAGGACACGGCCGAGTCCTGGTCCAGCTGGGTTTACAACAAATTTTCCGGGTAATTTTAATTTAATTTTTTGTTTCTTAATTAAAATTTAAATTATCGTCGATAAAATGTGATTTCGGGCGTGTTTGGCAGGGGATCGAAACCGGAGGAGGAAGCGGTGCCGAAAGAGACGGCTCACTTCTCGATGGACGGAGGAGTGGATGCACCGTCGGGGGCGGCGCTTGGAGGGGCGGCGAACGCTGCGGCGGACGCGGCGGGGAGAGCGATTGAGACTGGGAAAGAGATGGCGGCGGCGGCGGCGGACAAGGCGAGTGGCGCCAAAGACAAGGCGGCGGATTTTGGAGCTAAGATCAAGGAAAAGACTCAGAGTATTGAGTTATGA
mRNA sequence
ATGGCGAGAATCAGACCGACGTCGTCGGTTGTGGCGGTTGTGTGGGTGGTGCTGGCGGTGGCGGTGGGCGTGGAGAAATGCATGGGGTGGGAGGAGACGGTGCAAGACGTGAAGAGTAAAATAACCCAAATGTCGGATGACGCAAATATTCCTGAAAAGGCAGAGGCCGTTAAGGAAGGCGCCGCTGGAGTTTTCCATGACGCCAAGGACACGGCCGAGTCCTGGTCCAGCTGGGTTTACAACAAATTTTCCGGGGGATCGAAACCGGAGGAGGAAGCGGTGCCGAAAGAGACGGCTCACTTCTCGATGGACGGAGGAGTGGATGCACCGTCGGGGGCGGCGCTTGGAGGGGCGGCGAACGCTGCGGCGGACGCGGCGGGGAGAGCGATTGAGACTGGGAAAGAGATGGCGGCGGCGGCGGCGGACAAGGCGAGTGGCGCCAAAGACAAGGCGGCGGATTTTGGAGCTAAGATCAAGGAAAAGACTCAGAGTATTGAGTTATGA
Coding sequence (CDS)
ATGGCGAGAATCAGACCGACGTCGTCGGTTGTGGCGGTTGTGTGGGTGGTGCTGGCGGTGGCGGTGGGCGTGGAGAAATGCATGGGGTGGGAGGAGACGGTGCAAGACGTGAAGAGTAAAATAACCCAAATGTCGGATGACGCAAATATTCCTGAAAAGGCAGAGGCCGTTAAGGAAGGCGCCGCTGGAGTTTTCCATGACGCCAAGGACACGGCCGAGTCCTGGTCCAGCTGGGTTTACAACAAATTTTCCGGGGGATCGAAACCGGAGGAGGAAGCGGTGCCGAAAGAGACGGCTCACTTCTCGATGGACGGAGGAGTGGATGCACCGTCGGGGGCGGCGCTTGGAGGGGCGGCGAACGCTGCGGCGGACGCGGCGGGGAGAGCGATTGAGACTGGGAAAGAGATGGCGGCGGCGGCGGCGGACAAGGCGAGTGGCGCCAAAGACAAGGCGGCGGATTTTGGAGCTAAGATCAAGGAAAAGACTCAGAGTATTGAGTTATGA
Protein sequence
MARIRPTSSVVAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVFHDAKDTAESWSSWVYNKFSGGSKPEEEAVPKETAHFSMDGGVDAPSGAALGGAANAAADAAGRAIETGKEMAAAAADKASGAKDKAADFGAKIKEKTQSIEL
Homology
BLAST of Moc10g07520 vs. NCBI nr
Match:
XP_022136788.1 (uncharacterized protein LOC111008401 [Momordica charantia])
HSP 1 Score: 307.0 bits (785), Expect = 1.0e-79
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0
Query: 1 MARIRPTSSVVAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEG 60
MARIRPTSSVVAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEG
Sbjct: 1 MARIRPTSSVVAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEG 60
Query: 61 AAGVFHDAKDTAESWSSWVYNKFSGGSKPEEEAVPKETAHFSMDGGVDAPSGAALGGAAN 120
AAGVFHDAKDTAESWSSWVYNKFSGGSKPEEEAVPKETAHFSMDGGVDAPSGAALGGAAN
Sbjct: 61 AAGVFHDAKDTAESWSSWVYNKFSGGSKPEEEAVPKETAHFSMDGGVDAPSGAALGGAAN 120
Query: 121 AAADAAGRAIETGKEMAAAAADKASGAKDKAADFGAKIKEKTQSIEL 168
AAADAAGRAIETGKEMAAAAADKASGAKDKAADFGAKIKEKTQSIEL
Sbjct: 121 AAADAAGRAIETGKEMAAAAADKASGAKDKAADFGAKIKEKTQSIEL 167
BLAST of Moc10g07520 vs. NCBI nr
Match:
XP_038906279.1 (late embryogenesis abundant protein D-29 isoform X2 [Benincasa hispida])
HSP 1 Score: 95.1 bits (235), Expect = 6.0e-16
Identity = 69/159 (43.40%), Postives = 93/159 (58.49%), Query Frame = 0
Query: 9 SVVAVVWVVLAVAVGVEKCMGW-EETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVFHD 68
SVVAVVW++L +KC G EE +QDVK +++++ D ++ EKAEAVK GA+ VFHD
Sbjct: 8 SVVAVVWLLLV----ADKCRGMGEEALQDVKDNVSEITKDTSLDEKAEAVKSGASDVFHD 67
Query: 69 AKDTAESWSSWVYNKFSGGSKPEEEAVPKETAHFSMDGGVDAPSGAALGGAANAAADAAG 128
AK+ AESWS+W Y K S G E + KETAH+ +D DA + + AA+DA+
Sbjct: 68 AKENAESWSNWAYGKISKGLGFNGEEL-KETAHYVVDKAGDAAT-KTTEKVSTAASDASN 127
Query: 129 RAIETGKEMAAAAADKASGAKDKAADFGAKIKEKTQSIE 167
A E E AA+D A K K+ D EK I+
Sbjct: 128 YASEKAGEAVKAASDAAGNLKSKSGDVIGTATEKASDIK 160
BLAST of Moc10g07520 vs. NCBI nr
Match:
XP_038906272.1 (late embryogenesis abundant protein D-29 isoform X1 [Benincasa hispida])
HSP 1 Score: 94.4 bits (233), Expect = 1.0e-15
Identity = 69/161 (42.86%), Postives = 94/161 (58.39%), Query Frame = 0
Query: 9 SVVAVVWVVLAVAVGVEKCMGW-EETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVFHD 68
SVVAVVW++L +KC G EE +QDVK +++++ D ++ EKAEAVK GA+ VFHD
Sbjct: 8 SVVAVVWLLLV----ADKCRGMGEEALQDVKDNVSEITKDTSLDEKAEAVKSGASDVFHD 67
Query: 69 AKDTAESWSSWVYNKFSGGSKPEEEAVPKETAHFSMDGGVDAPSGAA--LGGAANAAADA 128
AK+ AESWS+W Y K S G E + KETAH+ +D DA + + AA+ +DA
Sbjct: 68 AKENAESWSNWAYGKISKGLGFNGEEL-KETAHYVVDKAGDAATKTTEKVSTAASELSDA 127
Query: 129 AGRAIETGKEMAAAAADKASGAKDKAADFGAKIKEKTQSIE 167
+ A E E AA+D A K K+ D EK I+
Sbjct: 128 SNYASEKAGEAVKAASDAAGNLKSKSGDVIGTATEKASDIK 163
BLAST of Moc10g07520 vs. NCBI nr
Match:
XP_022942848.1 (late embryogenesis abundant protein D-29-like [Cucurbita moschata])
HSP 1 Score: 93.6 bits (231), Expect = 1.7e-15
Identity = 74/164 (45.12%), Postives = 99/164 (60.37%), Query Frame = 0
Query: 7 TSSVVAVVWVVLAVAVG-VEKCMG--WEETVQDVKSKITQMSDDANIPEKAEAVKEGAAG 66
T S VAV+W++ A +G VEKC G + ++DVK IT++ + NI KAEAVK+GA+
Sbjct: 5 TWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASE 64
Query: 67 VFHDAKDTAESWSSWVYNKFSGGSKPEEEAVPKETAHFSMDGGVDAPSGA--ALGGAANA 126
VF+DAKD AESWS+W + S G EEE + K+TAH MD DA + +G AA+
Sbjct: 65 VFNDAKDAAESWSNWASAQISKGLGLEEEGL-KQTAHHMMDKAGDAATKTTHTIGTAASD 124
Query: 127 AADAAGRAIETGKEMAAAAADKASGAKDKAADFGAKIKEKTQSI 166
A+D AG A++ A +DKAS AK KA D KEK +
Sbjct: 125 ASDKAGEAVK-------AVSDKASDAKTKAKDTFVNGKEKAAKV 160
BLAST of Moc10g07520 vs. NCBI nr
Match:
XP_004146505.1 (late embryogenesis abundant protein D-29 [Cucumis sativus] >KGN53307.1 hypothetical protein Csa_014395 [Cucumis sativus])
HSP 1 Score: 90.1 bits (222), Expect = 1.9e-14
Identity = 49/94 (52.13%), Postives = 63/94 (67.02%), Query Frame = 0
Query: 11 VAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVFHDAKD 70
VAVVW+VL +KC G+EE VQD+K + QM++DA + EKAEAVK A+ V+ DAKD
Sbjct: 12 VAVVWLVLV----ADKCSGFEEAVQDMKDNVKQMAEDAKLDEKAEAVKSKASEVYTDAKD 71
Query: 71 TAESWSSWVYNKFSGGSKPEEEAVPKETAHFSMD 105
A SWS+W Y+K S G EE+ KETA + D
Sbjct: 72 KASSWSNWAYDKISAGLGLSEESKEKETAPNAAD 101
BLAST of Moc10g07520 vs. ExPASy TrEMBL
Match:
A0A6J1C8I5 (uncharacterized protein LOC111008401 OS=Momordica charantia OX=3673 GN=LOC111008401 PE=4 SV=1)
HSP 1 Score: 307.0 bits (785), Expect = 4.9e-80
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0
Query: 1 MARIRPTSSVVAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEG 60
MARIRPTSSVVAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEG
Sbjct: 1 MARIRPTSSVVAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEG 60
Query: 61 AAGVFHDAKDTAESWSSWVYNKFSGGSKPEEEAVPKETAHFSMDGGVDAPSGAALGGAAN 120
AAGVFHDAKDTAESWSSWVYNKFSGGSKPEEEAVPKETAHFSMDGGVDAPSGAALGGAAN
Sbjct: 61 AAGVFHDAKDTAESWSSWVYNKFSGGSKPEEEAVPKETAHFSMDGGVDAPSGAALGGAAN 120
Query: 121 AAADAAGRAIETGKEMAAAAADKASGAKDKAADFGAKIKEKTQSIEL 168
AAADAAGRAIETGKEMAAAAADKASGAKDKAADFGAKIKEKTQSIEL
Sbjct: 121 AAADAAGRAIETGKEMAAAAADKASGAKDKAADFGAKIKEKTQSIEL 167
BLAST of Moc10g07520 vs. ExPASy TrEMBL
Match:
A0A6J1FVT6 (late embryogenesis abundant protein D-29-like OS=Cucurbita moschata OX=3662 GN=LOC111447755 PE=4 SV=1)
HSP 1 Score: 93.6 bits (231), Expect = 8.4e-16
Identity = 74/164 (45.12%), Postives = 99/164 (60.37%), Query Frame = 0
Query: 7 TSSVVAVVWVVLAVAVG-VEKCMG--WEETVQDVKSKITQMSDDANIPEKAEAVKEGAAG 66
T S VAV+W++ A +G VEKC G + ++DVK IT++ + NI KAEAVK+GA+
Sbjct: 5 TWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASE 64
Query: 67 VFHDAKDTAESWSSWVYNKFSGGSKPEEEAVPKETAHFSMDGGVDAPSGA--ALGGAANA 126
VF+DAKD AESWS+W + S G EEE + K+TAH MD DA + +G AA+
Sbjct: 65 VFNDAKDAAESWSNWASAQISKGLGLEEEGL-KQTAHHMMDKAGDAATKTTHTIGTAASD 124
Query: 127 AADAAGRAIETGKEMAAAAADKASGAKDKAADFGAKIKEKTQSI 166
A+D AG A++ A +DKAS AK KA D KEK +
Sbjct: 125 ASDKAGEAVK-------AVSDKASDAKTKAKDTFVNGKEKAAKV 160
BLAST of Moc10g07520 vs. ExPASy TrEMBL
Match:
A0A0A0KY19 (Late embryogenesis abundant OS=Cucumis sativus OX=3659 GN=Csa_4G046700 PE=4 SV=1)
HSP 1 Score: 90.1 bits (222), Expect = 9.3e-15
Identity = 49/94 (52.13%), Postives = 63/94 (67.02%), Query Frame = 0
Query: 11 VAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVFHDAKD 70
VAVVW+VL +KC G+EE VQD+K + QM++DA + EKAEAVK A+ V+ DAKD
Sbjct: 12 VAVVWLVLV----ADKCSGFEEAVQDMKDNVKQMAEDAKLDEKAEAVKSKASEVYTDAKD 71
Query: 71 TAESWSSWVYNKFSGGSKPEEEAVPKETAHFSMD 105
A SWS+W Y+K S G EE+ KETA + D
Sbjct: 72 KASSWSNWAYDKISAGLGLSEESKEKETAPNAAD 101
BLAST of Moc10g07520 vs. ExPASy TrEMBL
Match:
A0A5A7TSE6 (Late embryogenesis abundant protein D-29-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004980 PE=4 SV=1)
HSP 1 Score: 89.7 bits (221), Expect = 1.2e-14
Identity = 69/160 (43.12%), Postives = 92/160 (57.50%), Query Frame = 0
Query: 10 VVAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVFHDAK 69
VVAVVW+VL EKC G+ E V+DVK ++++++DA + EKAEAVK A+ V+ DAK
Sbjct: 9 VVAVVWLVLV----AEKCSGYGEAVRDVKDNVSEIAEDAKLDEKAEAVKSTASEVYSDAK 68
Query: 70 DTAESWSSWVYNKFSGGSKPEEEAVPKETAHFSMDGGVDA------PSGAALGGAANAAA 129
D AESWS+W Y+K S G E+ + KETAH D DA A GA+N A+
Sbjct: 69 DKAESWSNWAYDKISKGLGLSEKEL-KETAHNVADKAGDAAIKTTEKINTAASGASNYAS 128
Query: 130 DAAGRAIETGKEMAAAAADKASGAKDKAADFGAKIKEKTQ 164
+ AG E A AA++ AS K K+ D EK +
Sbjct: 129 EKAG-------EAAKAASEAASNLKSKSGDVVGTATEKVK 156
BLAST of Moc10g07520 vs. ExPASy TrEMBL
Match:
A0A1S3BT31 (late embryogenesis abundant protein D-29-like OS=Cucumis melo OX=3656 GN=LOC103493195 PE=4 SV=1)
HSP 1 Score: 89.7 bits (221), Expect = 1.2e-14
Identity = 69/160 (43.12%), Postives = 92/160 (57.50%), Query Frame = 0
Query: 10 VVAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVFHDAK 69
VVAVVW+VL EKC G+ E V+DVK ++++++DA + EKAEAVK A+ V+ DAK
Sbjct: 9 VVAVVWLVLV----AEKCSGYGEAVRDVKDNVSEIAEDAKLDEKAEAVKSTASEVYSDAK 68
Query: 70 DTAESWSSWVYNKFSGGSKPEEEAVPKETAHFSMDGGVDA------PSGAALGGAANAAA 129
D AESWS+W Y+K S G E+ + KETAH D DA A GA+N A+
Sbjct: 69 DKAESWSNWAYDKISKGLGLSEKEL-KETAHNVADKAGDAAIKTTEKINTAASGASNYAS 128
Query: 130 DAAGRAIETGKEMAAAAADKASGAKDKAADFGAKIKEKTQ 164
+ AG E A AA++ AS K K+ D EK +
Sbjct: 129 EKAG-------EAAKAASEAASNLKSKSGDVVGTATEKVK 156
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022136788.1 | 1.0e-79 | 100.00 | uncharacterized protein LOC111008401 [Momordica charantia] | [more] |
| XP_038906279.1 | 6.0e-16 | 43.40 | late embryogenesis abundant protein D-29 isoform X2 [Benincasa hispida] | [more] |
| XP_038906272.1 | 1.0e-15 | 42.86 | late embryogenesis abundant protein D-29 isoform X1 [Benincasa hispida] | [more] |
| XP_022942848.1 | 1.7e-15 | 45.12 | late embryogenesis abundant protein D-29-like [Cucurbita moschata] | [more] |
| XP_004146505.1 | 1.9e-14 | 52.13 | late embryogenesis abundant protein D-29 [Cucumis sativus] >KGN53307.1 hypotheti... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1C8I5 | 4.9e-80 | 100.00 | uncharacterized protein LOC111008401 OS=Momordica charantia OX=3673 GN=LOC111008... | [more] |
| A0A6J1FVT6 | 8.4e-16 | 45.12 | late embryogenesis abundant protein D-29-like OS=Cucurbita moschata OX=3662 GN=L... | [more] |
| A0A0A0KY19 | 9.3e-15 | 52.13 | Late embryogenesis abundant OS=Cucumis sativus OX=3659 GN=Csa_4G046700 PE=4 SV=1 | [more] |
| A0A5A7TSE6 | 1.2e-14 | 43.13 | Late embryogenesis abundant protein D-29-like OS=Cucumis melo var. makuwa OX=119... | [more] |
| A0A1S3BT31 | 1.2e-14 | 43.13 | late embryogenesis abundant protein D-29-like OS=Cucumis melo OX=3656 GN=LOC1034... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
