Moc10g05090 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g05090
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Glutelin type-A 2
Location	chr10: 3530668 .. 3531630 (+)
RNA-Seq Expression	Moc10g05090
Synteny	Moc10g05090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTCGACTTGAAGGCAATGAATGACCAGACCTTCTCGGAGAGCGACGGCGGAGCCTACTACAACTGGCCGTCTTCTCAGTTTCCGGTGCTGTCGAAAGCCGATGTCGCCGCTGGCAGACTCGTCCTCCGCCCCCGCGGCTTCGCCCTCCCCCATTACGCCGATTCTTCTAAAGTTGGTTACGTTACACAAGGTGAGCTTATCTCGATGTTTAATTTAGATACCTTCTAGAAAAATTGGCATGGAAGGACATCGAAAAGATGACTTGAGGAGACTTCCTTAAAATTTGTCATTCTTAGTATACTATATGCCAAGAATTTTATTGTCAAATATGAGTCGGCATATATTTTTTTCCTTTTAAGATCGGGAGTTCAAATTCACACTCTCATATAGATTGCACAGCTCGTAATTCTATTAATTTCTTAAGGAGTTTCAAATGCTTTAGACTAATATAGTTTTCGTCTAAACAAAAATAACTAATAACACCTTAACACACTTTAATTCCTATATATTTTTGGTCGTCTTACGAGATTAATCGACGTGTGCATGCACGTAAATTGACATGGACATTTATGGATATATATATATATATAACCTTAGTATTTTTTTACCTTGTATAGTACCTTAAATATTTATGATACAATAGGCAATGGAGTGGTGGGATTGGTGCTTCCAAATGAGTCAAAAGAGCAAATTTTGGAGCTGAATAAAGGAGATGCAATACCAGTTCCGCCGGAGCCGTCTCCTGGTGGTTCAACGGCGGCGAAGATTCCGATTTGGAAATCATATTCCTCGGCGAGACTTCAAATTCCCACATCCATGGCGAACTTACCTACTTCCTTCTCGCCGGAGCTCAAGGAATCCTCTCAACTTTCTCGCCGGAGTTCATTTCCAAAGCCTATAATTTTAACAATATTGAAGAAGCAAACAAGCTCACGCGTAGTCAATCAGGGGTTTTGA

mRNA sequence

ATGGAGTTCGACTTGAAGGCAATGAATGACCAGACCTTCTCGGAGAGCGACGGCGGAGCCTACTACAACTGGCCGTCTTCTCAGTTTCCGGTGCTGTCGAAAGCCGATGTCGCCGCTGGCAGACTCGTCCTCCGCCCCCGCGGCTTCGCCCTCCCCCATTACGCCGATTCTTCTAAAGTTGGTTACGTTACACAAGGCAATGGAGTGGTGGGATTGGTGCTTCCAAATGAGTCAAAAGAGCAAATTTTGGAGCTGAATAAAGGAGATGCAATACCAGTTCCGCCGGAGCCGTCTCCTGGTGGTTCAACGGCGGCGAAGATTCCGATTTGGAAATCATATTCCTCGGCGAGACTTCAAATTCCCACATCCATGGCGAACTTACCTACTTCCTTCTCGCCGGAGCTCAAGGAATCCTCTCAACTTTCTCGCCGGAGTTCATTTCCAAAGCCTATAATTTTAACAATATTGAAGAAGCAAACAAGCTCACGCGTAGTCAATCAGGGGTTTTGA

Coding sequence (CDS)

ATGGAGTTCGACTTGAAGGCAATGAATGACCAGACCTTCTCGGAGAGCGACGGCGGAGCCTACTACAACTGGCCGTCTTCTCAGTTTCCGGTGCTGTCGAAAGCCGATGTCGCCGCTGGCAGACTCGTCCTCCGCCCCCGCGGCTTCGCCCTCCCCCATTACGCCGATTCTTCTAAAGTTGGTTACGTTACACAAGGCAATGGAGTGGTGGGATTGGTGCTTCCAAATGAGTCAAAAGAGCAAATTTTGGAGCTGAATAAAGGAGATGCAATACCAGTTCCGCCGGAGCCGTCTCCTGGTGGTTCAACGGCGGCGAAGATTCCGATTTGGAAATCATATTCCTCGGCGAGACTTCAAATTCCCACATCCATGGCGAACTTACCTACTTCCTTCTCGCCGGAGCTCAAGGAATCCTCTCAACTTTCTCGCCGGAGTTCATTTCCAAAGCCTATAATTTTAACAATATTGAAGAAGCAAACAAGCTCACGCGTAGTCAATCAGGGGTTTTGA

Protein sequence

MEFDLKAMNDQTFSESDGGAYYNWPSSQFPVLSKADVAAGRLVLRPRGFALPHYADSSKVGYVTQGNGVVGLVLPNESKEQILELNKGDAIPVPPEPSPGGSTAAKIPIWKSYSSARLQIPTSMANLPTSFSPELKESSQLSRRSSFPKPIILTILKKQTSSRVVNQGF

Homology

[Close]

BLAST of Moc10g05090 vs. NCBI nr
Match: XP_022149142.1 (uncharacterized protein LOC111017635 isoform X1 [Momordica charantia] >XP_022149143.1 uncharacterized protein LOC111017635 isoform X1 [Momordica charantia])

HSP 1 Score: 336.3 bits (861), Expect = 1.6e-88
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MEFDLKAMNDQTFSESDGGAYYNWPSSQFPVLSKADVAAGRLVLRPRGFALPHYADSSKV 60
           MEFDLKAMNDQTFSESDGGAYYNWPSSQFPVLSKADVAAGRLVLRPRGFALPHYADSSKV
Sbjct: 1   MEFDLKAMNDQTFSESDGGAYYNWPSSQFPVLSKADVAAGRLVLRPRGFALPHYADSSKV 60

Query: 61  GYVTQGNGVVGLVLPNESKEQILELNKGDAIPVPPEPSPGGSTAAKIPIWKSYSSARLQI 120
           GYVTQGNGVVGLVLPNESKEQILELNKGDAIPVPPEPSPGGSTAAKIPIWKSYSSARLQI
Sbjct: 61  GYVTQGNGVVGLVLPNESKEQILELNKGDAIPVPPEPSPGGSTAAKIPIWKSYSSARLQI 120

Query: 121 PTSMANLPTSFSPELKESSQLSRRSSFPKPIILTILKKQTSSRVVNQGF 170
           PTSMANLPTSFSPELKESSQLSRRSSFPKPIILTILKKQTSSRVVNQGF
Sbjct: 121 PTSMANLPTSFSPELKESSQLSRRSSFPKPIILTILKKQTSSRVVNQGF 169

[Close]

BLAST of Moc10g05090 vs. NCBI nr
Match: TKY60163.1 (Glutelin type-A 2 [Spatholobus suberectus])

HSP 1 Score: 129.4 bits (324), Expect = 2.9e-26
Identity = 61/95 (64.21%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 1  MEFDLKAMNDQTFSESDGGAYYNWPSSQFPVLSKADVAAGRLVLRPRGFALPHYADSSKV 60
          ME DL     Q   E DGG+YY W SSQ P+L+K +V AGRLVL+PRGFALPHYADSSKV
Sbjct: 1  MELDLTPKTAQPMFEGDGGSYYTWSSSQMPILAKTNVGAGRLVLQPRGFALPHYADSSKV 60

Query: 61 GYVTQG-NGVVGLVLPNESKEQILELNKGDAIPVP 95
          GYV +G  G+VG+VLPN  +E +L+L KGD IPVP
Sbjct: 61 GYVIEGTEGIVGMVLPNTGEEVVLKLKKGDVIPVP 95

[Close]

BLAST of Moc10g05090 vs. NCBI nr
Match: XP_004504184.1 (11S globulin seed storage protein 2-like [Cicer arietinum])

HSP 1 Score: 129.4 bits (324), Expect = 2.9e-26
Identity = 63/95 (66.32%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 1  MEFDLKAMNDQTFSESDGGAYYNWPSSQFPVLSKADVAAGRLVLRPRGFALPHYADSSKV 60
          ME DL     +T  E DGG YY W SSQ PVL+K +V AG+LVLRPRGFALPHYADS+K+
Sbjct: 1  MELDLTPKVAETLLEGDGGGYYIWLSSQVPVLAKTNVGAGQLVLRPRGFALPHYADSNKI 60

Query: 61 GYVTQG-NGVVGLVLPNESKEQILELNKGDAIPVP 95
          GYV QG NGV GLVLPN  KE +++L KGD IPVP
Sbjct: 61 GYVIQGTNGVAGLVLPNSGKEVVVKLKKGDVIPVP 95

[Close]

BLAST of Moc10g05090 vs. NCBI nr
Match: XP_020213705.1 (11S globulin [Cajanus cajan] >XP_029127371.1 11S globulin [Cajanus cajan] >KYP76803.1 Glutelin type-A 2 [Cajanus cajan])

HSP 1 Score: 129.0 bits (323), Expect = 3.8e-26
Identity = 62/95 (65.26%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 1  MEFDLKAMNDQTFSESDGGAYYNWPSSQFPVLSKADVAAGRLVLRPRGFALPHYADSSKV 60
          ME DL     +T  E DGG YY W SSQ P+L+K +V AGRL+L PRGFALPHYADSSK+
Sbjct: 1  MELDLTPRRAETMFEGDGGGYYTWSSSQVPLLAKNNVCAGRLLLHPRGFALPHYADSSKI 60

Query: 61 GYVTQG-NGVVGLVLPNESKEQILELNKGDAIPVP 95
          GYV QG +GVVGLVLPN  +E +L+L KGD IPVP
Sbjct: 61 GYVIQGTDGVVGLVLPNTGEEVVLKLKKGDVIPVP 95

[Close]

BLAST of Moc10g05090 vs. NCBI nr
Match: XP_018835514.1 (cocosin 1-like [Juglans regia] >XP_018835515.1 cocosin 1-like [Juglans regia] >KAF5444083.1 hypothetical protein F2P56_036587 [Juglans regia] >KAF5444084.1 hypothetical protein F2P56_036588 [Juglans regia])

HSP 1 Score: 128.6 bits (322), Expect = 4.9e-26
Identity = 61/95 (64.21%), Postives = 75/95 (78.95%), Query Frame = 0


Query: 1  MEFDLKAMNDQTFSESDGGAYYNWPSSQFPVLSKADVAAGRLVLRPRGFALPHYADSSKV 60
          MEFDL + + Q   E DGG+YY+W SS+FPVL ++ V AG+LVL+PRGFALPH+ADSSKV
Sbjct: 1  MEFDLASKSAQKIFEGDGGSYYSWSSSEFPVLRESKVGAGKLVLQPRGFALPHHADSSKV 60

Query: 61 GYVTQG-NGVVGLVLPNESKEQILELNKGDAIPVP 95
          GYV QG +GVVG V PN  +E +L+L KGD IPVP
Sbjct: 61 GYVLQGSDGVVGFVFPNTEEEVVLKLKKGDVIPVP 95

[Close]

BLAST of Moc10g05090 vs. ExPASy Swiss-Prot
Match: P05190 (Legumin type B OS=Vicia faba OX=3906 GN=LEB4 PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 6.5e-05
Identity = 32/113 (28.32%), Postives = 48/113 (42.48%), Query Frame = 0


Query: 4   DLKAMNDQTFSESDGGAYYNWPSSQFPVLSKADVAAGRLVLRPRGFALPHYADSSKVGYV 63
           ++ A+      ES+ G    W +   P L  A V+  R  + P G  LP Y+ S ++ Y+
Sbjct: 37  NINALEPDHRVESEAGLTETW-NPNHPELRCAGVSLIRRTIDPNGLHLPSYSPSPQLIYI 96

Query: 64  TQGNGVVGLVLPN----------------------ESKEQILELNKGDAIPVP 95
            QG GV+GL LP                       +S ++I    KGD I +P
Sbjct: 97  IQGKGVIGLTLPGCPQTYQEPRSSQSRQGSRQQQPDSHQKIRRFRKGDIIAIP 148

[Close]

BLAST of Moc10g05090 vs. ExPASy TrEMBL
Match: A0A6J1D711 (uncharacterized protein LOC111017635 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017635 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 7.6e-89
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MEFDLKAMNDQTFSESDGGAYYNWPSSQFPVLSKADVAAGRLVLRPRGFALPHYADSSKV 60
           MEFDLKAMNDQTFSESDGGAYYNWPSSQFPVLSKADVAAGRLVLRPRGFALPHYADSSKV
Sbjct: 1   MEFDLKAMNDQTFSESDGGAYYNWPSSQFPVLSKADVAAGRLVLRPRGFALPHYADSSKV 60

Query: 61  GYVTQGNGVVGLVLPNESKEQILELNKGDAIPVPPEPSPGGSTAAKIPIWKSYSSARLQI 120
           GYVTQGNGVVGLVLPNESKEQILELNKGDAIPVPPEPSPGGSTAAKIPIWKSYSSARLQI
Sbjct: 61  GYVTQGNGVVGLVLPNESKEQILELNKGDAIPVPPEPSPGGSTAAKIPIWKSYSSARLQI 120

Query: 121 PTSMANLPTSFSPELKESSQLSRRSSFPKPIILTILKKQTSSRVVNQGF 170
           PTSMANLPTSFSPELKESSQLSRRSSFPKPIILTILKKQTSSRVVNQGF
Sbjct: 121 PTSMANLPTSFSPELKESSQLSRRSSFPKPIILTILKKQTSSRVVNQGF 169

[Close]

BLAST of Moc10g05090 vs. ExPASy TrEMBL
Match: A0A1S2YGT3 (11S globulin seed storage protein 2-like OS=Cicer arietinum OX=3827 GN=LOC101488886 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 1.4e-26
Identity = 63/95 (66.32%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 1  MEFDLKAMNDQTFSESDGGAYYNWPSSQFPVLSKADVAAGRLVLRPRGFALPHYADSSKV 60
          ME DL     +T  E DGG YY W SSQ PVL+K +V AG+LVLRPRGFALPHYADS+K+
Sbjct: 1  MELDLTPKVAETLLEGDGGGYYIWLSSQVPVLAKTNVGAGQLVLRPRGFALPHYADSNKI 60

Query: 61 GYVTQG-NGVVGLVLPNESKEQILELNKGDAIPVP 95
          GYV QG NGV GLVLPN  KE +++L KGD IPVP
Sbjct: 61 GYVIQGTNGVAGLVLPNSGKEVVVKLKKGDVIPVP 95

[Close]

BLAST of Moc10g05090 vs. ExPASy TrEMBL
Match: A0A151UBW6 (Glutelin type-A 2 OS=Cajanus cajan OX=3821 GN=KK1_021060 PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.8e-26
Identity = 62/95 (65.26%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 1  MEFDLKAMNDQTFSESDGGAYYNWPSSQFPVLSKADVAAGRLVLRPRGFALPHYADSSKV 60
          ME DL     +T  E DGG YY W SSQ P+L+K +V AGRL+L PRGFALPHYADSSK+
Sbjct: 1  MELDLTPRRAETMFEGDGGGYYTWSSSQVPLLAKNNVCAGRLLLHPRGFALPHYADSSKI 60

Query: 61 GYVTQG-NGVVGLVLPNESKEQILELNKGDAIPVP 95
          GYV QG +GVVGLVLPN  +E +L+L KGD IPVP
Sbjct: 61 GYVIQGTDGVVGLVLPNTGEEVVLKLKKGDVIPVP 95

[Close]

BLAST of Moc10g05090 vs. ExPASy TrEMBL
Match: A0A2I4FV44 (cocosin 1-like OS=Juglans regia OX=51240 GN=LOC109002291 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.4e-26
Identity = 61/95 (64.21%), Postives = 75/95 (78.95%), Query Frame = 0


Query: 1  MEFDLKAMNDQTFSESDGGAYYNWPSSQFPVLSKADVAAGRLVLRPRGFALPHYADSSKV 60
          MEFDL + + Q   E DGG+YY+W SS+FPVL ++ V AG+LVL+PRGFALPH+ADSSKV
Sbjct: 1  MEFDLASKSAQKIFEGDGGSYYSWSSSEFPVLRESKVGAGKLVLQPRGFALPHHADSSKV 60

Query: 61 GYVTQG-NGVVGLVLPNESKEQILELNKGDAIPVP 95
          GYV QG +GVVG V PN  +E +L+L KGD IPVP
Sbjct: 61 GYVLQGSDGVVGFVFPNTEEEVVLKLKKGDVIPVP 95

[Close]

BLAST of Moc10g05090 vs. ExPASy TrEMBL
Match: A0A445KQ46 (Glutelin type-A 2 isoform A OS=Glycine soja OX=3848 GN=D0Y65_012542 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 4.1e-26
Identity = 61/95 (64.21%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 1  MEFDLKAMNDQTFSESDGGAYYNWPSSQFPVLSKADVAAGRLVLRPRGFALPHYADSSKV 60
          ME DL     +   E DGG YY W SSQ P+L+K +V AGRLVL+PRGFALPHYADSSK+
Sbjct: 1  MELDLTPKTAEALFEGDGGGYYTWSSSQVPLLAKNNVGAGRLVLQPRGFALPHYADSSKI 60

Query: 61 GYVTQG-NGVVGLVLPNESKEQILELNKGDAIPVP 95
          GYV QG +GVVG+VLPN  +E +L+L KGD IPVP
Sbjct: 61 GYVIQGTDGVVGMVLPNTKEEVVLKLKKGDVIPVP 95

[Close]

BLAST of Moc10g05090 vs. TAIR 10
Match: AT1G07750.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 4.5e-17
Identity = 39/94 (41.49%), Postives = 59/94 (62.77%), Query Frame = 0


Query: 1  MEFDLKAMNDQTFSESDGGAYYNWPSSQFPVLSKADVAAGRLVLRPRGFALPHYADSSKV 60
          ME DL     +     DGG+Y  W   + P+L + ++ A +L L   GFA+P Y+DSSKV
Sbjct: 1  MELDLTPKLPKKVYGGDGGSYSAWCPEELPMLKQGNIGAAKLALEKNGFAVPRYSDSSKV 60

Query: 61 GYVTQGNGVVGLVLPNESKEQILELNKGDAIPVP 95
           YV QG+G  G+VLP E +E+++ + +GD+I +P
Sbjct: 61 AYVLQGSGTAGIVLP-EKEEKVIAIKQGDSIALP 93

[Close]

BLAST of Moc10g05090 vs. TAIR 10
Match: AT2G28680.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 2.2e-16
Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 0


Query: 1  MEFDLKAMNDQTFSESDGGAYYNWPSSQFPVLSKADVAAGRLVLRPRGFALPHYADSSKV 60
          ME DL     +     DGG+Y+ W   + P+L   ++ A +L L   G ALP Y+DS KV
Sbjct: 1  MELDLSPRLPKKVYGGDGGSYFAWCPEELPMLRDGNIGASKLALEKYGLALPRYSDSPKV 60

Query: 61 GYVTQGNGVVGLVLPNESKEQILELNKGDAIPVP 95
           YV QG G  G+VLP E +E+++ + KGD+I +P
Sbjct: 61 AYVLQGAGTAGIVLP-EKEEKVIAIKKGDSIALP 93

The following BLAST results are available for this feature:

BLAST of Moc10g05090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149142.1	1.6e-88	100.00	uncharacterized protein LOC111017635 isoform X1 [Momordica charantia] >XP_022149...	[more]
TKY60163.1	2.9e-26	64.21	Glutelin type-A 2 [Spatholobus suberectus]	[more]
XP_004504184.1	2.9e-26	66.32	11S globulin seed storage protein 2-like [Cicer arietinum]	[more]
XP_020213705.1	3.8e-26	65.26	11S globulin [Cajanus cajan] >XP_029127371.1 11S globulin [Cajanus cajan] >KYP76...	[more]
XP_018835514.1	4.9e-26	64.21	cocosin 1-like [Juglans regia] >XP_018835515.1 cocosin 1-like [Juglans regia] >K...	[more]

BLAST of Moc10g05090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P05190	6.5e-05	28.32	Legumin type B OS=Vicia faba OX=3906 GN=LEB4 PE=3 SV=1	[more]

BLAST of Moc10g05090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D711	7.6e-89	100.00	uncharacterized protein LOC111017635 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A1S2YGT3	1.4e-26	66.32	11S globulin seed storage protein 2-like OS=Cicer arietinum OX=3827 GN=LOC101488...	[more]
A0A151UBW6	1.8e-26	65.26	Glutelin type-A 2 OS=Cajanus cajan OX=3821 GN=KK1_021060 PE=3 SV=1	[more]
A0A2I4FV44	2.4e-26	64.21	cocosin 1-like OS=Juglans regia OX=51240 GN=LOC109002291 PE=4 SV=1	[more]
A0A445KQ46	4.1e-26	64.21	Glutelin type-A 2 isoform A OS=Glycine soja OX=3848 GN=D0Y65_012542 PE=3 SV=1	[more]

BLAST of Moc10g05090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07750.1	4.5e-17	41.49	RmlC-like cupins superfamily protein	[more]
AT2G28680.1	2.2e-16	41.49	RmlC-like cupins superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 3..148 e-value: 3.6E-11 score: 53.1
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 13..95 e-value: 4.8E-16 score: 58.7
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 7..97 e-value: 3.1E-21 score: 77.4
None	No IPR available	PANTHER	PTHR31189	OS03G0336100 PROTEIN-RELATED	coord: 3..94
None	No IPR available	PANTHER	PTHR31189:SF45	11S GLOBULIN SEED STORAGE PROTEIN 2-LIKE	coord: 3..94
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 5..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g05090.1	Moc10g05090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005773	vacuole