Moc09g35500 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGTCATCGGCAGAAAACAGGCGAAGATCAGAAGAAGCAAGAAATCGGCCGCCGATTTCAAAGTCGTCTACATTTCGAGTCCGATGAAGGTGAAAACCAGCGCCTCCAAGTTCAGATCTCTCGTCCAGAAGCTCACCGGCCAGGACTCCGACGCCGAGCGCTTCATGGAGCTGATCGCCGCCGCCGCCGCCGCCGATCGGAATCATCTTCAGCCATCGTCGTCGGCGGCGTTCCTCGACCACCAACTCCTCTGCGACGCCGACGACGATCAAATCGATCGCGATAATCATCACCGTCTCGTGTCTGGTAACATCGAATCGTCGTATCAATCGTCGATTGCTCCGCCGGATGATTTGATTTTGCAGAACTTCGATGCGAATTTTGCAGACATGTTCCATGGCTTTTTGCACGATTCTTCTACACAAACTCAGATGCCGGGTTTGGCTCTACTGTAA ATGGATGTCATCGGCAGAAAACAGGCGAAGATCAGAAGAAGCAAGAAATCGGCCGCCGATTTCAAAGTCGTCTACATTTCGAGTCCGATGAAGGTGAAAACCAGCGCCTCCAAGTTCAGATCTCTCGTCCAGAAGCTCACCGGCCAGGACTCCGACGCCGAGCGCTTCATGGAGCTGATCGCCGCCGCCGCCGCCGCCGATCGGAATCATCTTCAGCCATCGTCGTCGGCGGCGTTCCTCGACCACCAACTCCTCTGCGACGCCGACGACGATCAAATCGATCGCGATAATCATCACCGTCTCGTGTCTGGTAACATCGAATCGTCGTATCAATCGTCGATTGCTCCGCCGGATGATTTGATTTTGCAGAACTTCGATGCGAATTTTGCAGACATGTTCCATGGCTTTTTGCACGATTCTTCTACACAAACTCAGATGCCGGGTTTGGCTCTACTGTAA ATGGATGTCATCGGCAGAAAACAGGCGAAGATCAGAAGAAGCAAGAAATCGGCCGCCGATTTCAAAGTCGTCTACATTTCGAGTCCGATGAAGGTGAAAACCAGCGCCTCCAAGTTCAGATCTCTCGTCCAGAAGCTCACCGGCCAGGACTCCGACGCCGAGCGCTTCATGGAGCTGATCGCCGCCGCCGCCGCCGCCGATCGGAATCATCTTCAGCCATCGTCGTCGGCGGCGTTCCTCGACCACCAACTCCTCTGCGACGCCGACGACGATCAAATCGATCGCGATAATCATCACCGTCTCGTGTCTGGTAACATCGAATCGTCGTATCAATCGTCGATTGCTCCGCCGGATGATTTGATTTTGCAGAACTTCGATGCGAATTTTGCAGACATGTTCCATGGCTTTTTGCACGATTCTTCTACACAAACTCAGATGCCGGGTTTGGCTCTACTGTAA MDVIGRKQAKIRRSKKSAADFKVVYISSPMKVKTSASKFRSLVQKLTGQDSDAERFMELIAAAAAADRNHLQPSSSAAFLDHQLLCDADDDQIDRDNHHRLVSGNIESSYQSSIAPPDDLILQNFDANFADMFHGFLHDSSTQTQMPGLALL Homology
BLAST of Moc09g35500 vs. NCBI nr
Match: XP_022139181.1 (uncharacterized protein LOC111010149 [Momordica charantia]) HSP 1 Score: 295.0 bits (754), Expect = 3.6e-76 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of Moc09g35500 vs. NCBI nr
Match: KAG6573793.1 (Sigma factor binding protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 192.2 bits (487), Expect = 3.3e-45 Identity = 108/155 (69.68%), Postives = 131/155 (84.52%), Query Frame = 0
BLAST of Moc09g35500 vs. NCBI nr
Match: XP_022945563.1 (sigma factor binding protein 1, chloroplastic-like [Cucurbita moschata] >KAG7012870.1 Sigma factor binding protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 192.2 bits (487), Expect = 3.3e-45 Identity = 108/155 (69.68%), Postives = 131/155 (84.52%), Query Frame = 0
BLAST of Moc09g35500 vs. NCBI nr
Match: XP_023542375.1 (sigma factor binding protein 1, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 191.8 bits (486), Expect = 4.3e-45 Identity = 108/155 (69.68%), Postives = 131/155 (84.52%), Query Frame = 0
BLAST of Moc09g35500 vs. NCBI nr
Match: XP_022966872.1 (sigma factor binding protein 1, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 190.3 bits (482), Expect = 1.2e-44 Identity = 107/155 (69.03%), Postives = 131/155 (84.52%), Query Frame = 0
BLAST of Moc09g35500 vs. ExPASy Swiss-Prot
Match: Q9LDH1 (Sigma factor binding protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SIB1 PE=1 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 2.9e-04 Identity = 32/76 (42.11%), Postives = 46/76 (60.53%), Query Frame = 0
BLAST of Moc09g35500 vs. ExPASy TrEMBL
Match: A0A6J1CBX0 (uncharacterized protein LOC111010149 OS=Momordica charantia OX=3673 GN=LOC111010149 PE=4 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 1.7e-76 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of Moc09g35500 vs. ExPASy TrEMBL
Match: A0A6J1G190 (sigma factor binding protein 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111449759 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.6e-45 Identity = 108/155 (69.68%), Postives = 131/155 (84.52%), Query Frame = 0
BLAST of Moc09g35500 vs. ExPASy TrEMBL
Match: A0A6J1HP65 (sigma factor binding protein 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111466446 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 6.0e-45 Identity = 107/155 (69.03%), Postives = 131/155 (84.52%), Query Frame = 0
BLAST of Moc09g35500 vs. ExPASy TrEMBL
Match: A0A6J1GZT9 (sigma factor binding protein 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458651 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 2.1e-34 Identity = 96/138 (69.57%), Postives = 109/138 (78.99%), Query Frame = 0
BLAST of Moc09g35500 vs. ExPASy TrEMBL
Match: D1MWZ4 (Sigma factor binding protein 1 OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=CitSIB PE=2 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 3.7e-34 Identity = 100/158 (63.29%), Postives = 118/158 (74.68%), Query Frame = 0
BLAST of Moc09g35500 vs. TAIR 10
Match: AT3G56710.1 (sigma factor binding protein 1 ) HSP 1 Score: 46.6 bits (109), Expect = 2.1e-05 Identity = 32/76 (42.11%), Postives = 46/76 (60.53%), Query Frame = 0
BLAST of Moc09g35500 vs. TAIR 10
Match: AT2G41180.1 (VQ motif-containing protein ) HSP 1 Score: 44.7 bits (104), Expect = 7.9e-05 Identity = 23/40 (57.50%), Postives = 30/40 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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