Moc09g33620 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g33620
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Pentatricopeptide repeat-containing protein
Location	chr9: 25521819 .. 25523936 (+)
RNA-Seq Expression	Moc09g33620
Synteny	Moc09g33620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGTTTACCGTGGAACCTCAATTGGTTTTGACACCCTCGTGCCAAAGGCAAGCCACGAAACCTTGAACTTTCGTCGATTTTCGTTTTTACAATTTCTCAGTGATTAATCGGACAATTTCCCCCTTTTGCTTTCAGAAAGATTGCATTTGCAATTTCAACAAATTGACATTTAGAGCCGCTAGTTTCAAGTGTTCCCACAACCAAGCCGTGCAGCCGTTTACTAGTTCCCCCACAATTGAGAGGTTCTCTTTTTTCTTTTCTATTCTTGGTTTCTGGGTTTCCTTTAAATTGACCCCAGAATTTTGATTTTAGTGTTCTTTGCTTAAATGTAGGCGTATTGTGAAGAAGGTTGGGAAGGAGGCGCATCATTTATGGAAGAAAAGAGATTCTGCTGGCTCTGGGCAAAAGGCCCTTAATCTTGTTAGAATTGTATGTTGCATTTTGTATAATTTTCTTTCTAATTGCCCTTCCAATATTGAGATGAAAGCATGGAAATGCCAAGTGATTTCATATTAATTGATTTCCTTAACATATTGTGATATTCCTCCTCTTTGTCCTTTACTGTCAGGTCTCCCAATGTCCTAATGAAAAAGAAGCTGTCTATGGAGCGTTAAATAAGTGGATAGCTTGGGAGACAGAGTTTCCGTTGATTGCGGCTGCTAAAGCTTTAAGAATACTGAGGAAGAGAAGTCAATGGAAGCGAGTCATTCAAGTATGAATCAATGTTTTACTCATTGTCTTTTGAGCCTTTGGCATATTGGTATATCGCTCATTATGAATTCTCATCGATAGACATTTTAGGTTTTGATTCTAAACTATGAAGTTGTGCCTATTAAGATTAAATCTTCTCCAGCTCTTATAGCTATTACTTTGCTTATTGTTTTTGTCAGCTAACCTACTCGTGTGCTAGATTTTTATTGTAATGTGGCATTGGCTTGATTGGTTGTGGTGTTTTCAGTTCTTATTATTGAAGTTTTGATCTTGAACCTTGCTCATCTGGACTTTCTTATGGTTAAAATATGACTGGAGGAAAATTACTTATAGACAGATAACCACTTCAGATTTGGTTGGTATATCAAATTGTCTAATTCTTGTTTAAGGTTTAGCTTTATGGACAAAGAATTGATGGTTGTCAGTTCCAGAATTTTGAATTATGAAACAATAGCGATTTCTTGTCTGAGAAAAATGTTTGTCGAACTATAATACCACCGAGACTGGCTATGGTGTTGGAAGCCACAATGTTGAACTTGCTCATTACTTATGTTTTTGACATGTAAAAAGATTATCTTAAAAAAATTGTAGAAGAAGAAGAGCTGTTGTCTTTTGCCAATGTAAATTCCTCAGAGTCCATTTTCCATAGTAAATCTTGGGCTATTCATGGTAGTTTCTGTATACAATATTTTATAGTGGCCTTTTGCCTTCCACTAGGAAACTGATAAGTTATGGCCTTTTTGCGAAGTGTCTTGGCTTGATGAGGGTCTGTTCAATGGCCGAACATTGTTTCTTCCACCGCGTCCTATTGTTAATTGATGTTTCTTATTACCCAGGTGGCGAAGTGGATGTTAAGCAAGGGTCAAGGAGCCACAATGGGAACATATGACTCCCTTTTACTGGCATTCGATATGGACAAGAGGGTGGACGAAGCCGAATCCTTATGGAACATGATTTTGCATACGCATACACGTTCCATCTCTAAGCAGTTATTTTCTAGGATGATCTCTTTGTACGATCATCATGACTTGCAAGATAAGGTTATCGAGGTATCGATAATGGAGACCCCACGTATTGGCATCGCTTGTGCTCTTATTTTCTAGTCTTACACCCCCTACACCTGTGTTTTCTGCAATCTTCTCCTCTTCATATCCTCATCAATGATCTTGTGCTTCAATTTCTTCTTTCTCTTGATACAGATATTTGCAGACATGGAGGAGTTAGGTGTAAAACCAGATGAAGATACTGTTAGAAGAGTCGCACGTGCCTTTCAGAAATTAGGTCAAGAAGAAAACCGCAAAATGGTCCATAAAAGATATGGCTGCAAATGGAAATATATACACTTTAAAGGTGAGAGGGTTAGAGTGAAAAGAGATGGATGGGATGAAGATGATGAAAGATGA

mRNA sequence

ATGTCGGTTTACCGTGGAACCTCAATTGGTTTTGACACCCTCGTGCCAAAGAAAGATTGCATTTGCAATTTCAACAAATTGACATTTAGAGCCGCTAGTTTCAAGTGTTCCCACAACCAAGCCGTGCAGCCGTTTACTAGTTCCCCCACAATTGAGAGGCGTATTGTGAAGAAGGTTGGGAAGGAGGCGCATCATTTATGGAAGAAAAGAGATTCTGCTGGCTCTGGGCAAAAGGCCCTTAATCTTGTTAGAATTGTCTCCCAATGTCCTAATGAAAAAGAAGCTGTCTATGGAGCGTTAAATAAGTGGATAGCTTGGGAGACAGAGTTTCCGTTGATTGCGGCTGCTAAAGCTTTAAGAATACTGAGGAAGAGAAGTCAATGGAAGCGAGTCATTCAAGTGGCGAAGTGGATGTTAAGCAAGGGTCAAGGAGCCACAATGGGAACATATGACTCCCTTTTACTGGCATTCGATATGGACAAGAGGGTGGACGAAGCCGAATCCTTATGGAACATGATTTTGCATACGCATACACGTTCCATCTCTAAGCAGTTATTTTCTAGGATGATCTCTTTGTACGATCATCATGACTTGCAAGATAAGGTTATCGAGATATTTGCAGACATGGAGGAGTTAGGTGTAAAACCAGATGAAGATACTGTTAGAAGAGTCGCACGTGCCTTTCAGAAATTAGGTCAAGAAGAAAACCGCAAAATGGTCCATAAAAGATATGGCTGCAAATGGAAATATATACACTTTAAAGGTGAGAGGGTTAGAGTGAAAAGAGATGGATGGGATGAAGATGATGAAAGATGA

Coding sequence (CDS)

ATGTCGGTTTACCGTGGAACCTCAATTGGTTTTGACACCCTCGTGCCAAAGAAAGATTGCATTTGCAATTTCAACAAATTGACATTTAGAGCCGCTAGTTTCAAGTGTTCCCACAACCAAGCCGTGCAGCCGTTTACTAGTTCCCCCACAATTGAGAGGCGTATTGTGAAGAAGGTTGGGAAGGAGGCGCATCATTTATGGAAGAAAAGAGATTCTGCTGGCTCTGGGCAAAAGGCCCTTAATCTTGTTAGAATTGTCTCCCAATGTCCTAATGAAAAAGAAGCTGTCTATGGAGCGTTAAATAAGTGGATAGCTTGGGAGACAGAGTTTCCGTTGATTGCGGCTGCTAAAGCTTTAAGAATACTGAGGAAGAGAAGTCAATGGAAGCGAGTCATTCAAGTGGCGAAGTGGATGTTAAGCAAGGGTCAAGGAGCCACAATGGGAACATATGACTCCCTTTTACTGGCATTCGATATGGACAAGAGGGTGGACGAAGCCGAATCCTTATGGAACATGATTTTGCATACGCATACACGTTCCATCTCTAAGCAGTTATTTTCTAGGATGATCTCTTTGTACGATCATCATGACTTGCAAGATAAGGTTATCGAGATATTTGCAGACATGGAGGAGTTAGGTGTAAAACCAGATGAAGATACTGTTAGAAGAGTCGCACGTGCCTTTCAGAAATTAGGTCAAGAAGAAAACCGCAAAATGGTCCATAAAAGATATGGCTGCAAATGGAAATATATACACTTTAAAGGTGAGAGGGTTAGAGTGAAAAGAGATGGATGGGATGAAGATGATGAAAGATGA

Protein sequence

MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERVRVKRDGWDEDDER

Homology

[Close]

BLAST of Moc09g33620 vs. NCBI nr
Match: XP_022139301.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Momordica charantia] >XP_022139302.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 552.4 bits (1422), Expect = 2.2e-153
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVG 60
           MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVG
Sbjct: 1   MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVG 60

Query: 61  KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALR 120
           KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALR
Sbjct: 61  KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMV 240
           ISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMV
Sbjct: 181 ISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMV 240

Query: 241 HKRYGCKWKYIHFKGERVRVKRDGWDEDDER 272
           HKRYGCKWKYIHFKGERVRVKRDGWDEDDER
Sbjct: 241 HKRYGCKWKYIHFKGERVRVKRDGWDEDDER 271

[Close]

BLAST of Moc09g33620 vs. NCBI nr
Match: XP_022139303.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 542.3 bits (1396), Expect = 2.3e-150
Identity = 268/271 (98.89%), Postives = 268/271 (98.89%), Query Frame = 0


Query: 1   MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVG 60
           MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVG
Sbjct: 1   MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVG 60

Query: 61  KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALR 120
           KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALR
Sbjct: 61  KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMV 240
           ISKQLFSRMISLYDHHDLQDK   IFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMV
Sbjct: 181 ISKQLFSRMISLYDHHDLQDK---IFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMV 240

Query: 241 HKRYGCKWKYIHFKGERVRVKRDGWDEDDER 272
           HKRYGCKWKYIHFKGERVRVKRDGWDEDDER
Sbjct: 241 HKRYGCKWKYIHFKGERVRVKRDGWDEDDER 268

[Close]

BLAST of Moc09g33620 vs. NCBI nr
Match: XP_023541595.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023541609.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 485.3 bits (1248), Expect = 3.3e-133
Identity = 239/271 (88.19%), Postives = 251/271 (92.62%), Query Frame = 0


Query: 1   MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIV-KKV 60
           M  YRG+S GFD LVPKK CI N+NKL FRAAS KC H QA Q  TSS T ERRIV KKV
Sbjct: 1   MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKV 60

Query: 61  GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKAL 120
           GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG LNKWIAWETEFPLIAA+KAL
Sbjct: 61  GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKAL 120

Query: 121 RILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTR 180
           RILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILH HTR
Sbjct: 121 RILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTR 180

Query: 181 SISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKM 240
           SISK+LFSRMISLYDHHDLQDK+IEIFADMEELGV+PDEDTVRRVA AF+KLGQEEN K+
Sbjct: 181 SISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKL 240

Query: 241 VHKRYGCKWKYIHFKGERVRVKRDGWDEDDE 271
           V+KRYGCKWKYIHFKGERVRV+RDGWDEDD+
Sbjct: 241 VYKRYGCKWKYIHFKGERVRVRRDGWDEDDK 271

[Close]

BLAST of Moc09g33620 vs. NCBI nr
Match: XP_022942519.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita moschata] >XP_022942520.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita moschata])

HSP 1 Score: 485.0 bits (1247), Expect = 4.4e-133
Identity = 239/271 (88.19%), Postives = 250/271 (92.25%), Query Frame = 0


Query: 1   MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIV-KKV 60
           M  YRG+S GFD LVPKK CI N+NKL FRAAS KC H QA Q  T S T ERRIV KKV
Sbjct: 1   MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKV 60

Query: 61  GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKAL 120
           GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG LNKWIAWETEFPLIAA+KAL
Sbjct: 61  GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKAL 120

Query: 121 RILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTR 180
           RILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILH HTR
Sbjct: 121 RILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTR 180

Query: 181 SISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKM 240
           SISK+LFSRMISLYDHHDLQDK+IEIFADMEELGV+PDEDTVRRVA AF+KLGQEEN KM
Sbjct: 181 SISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKM 240

Query: 241 VHKRYGCKWKYIHFKGERVRVKRDGWDEDDE 271
           V+KRYGCKWKYIHFKGERVRV+RDGWDEDD+
Sbjct: 241 VYKRYGCKWKYIHFKGERVRVRRDGWDEDDK 271

[Close]

BLAST of Moc09g33620 vs. NCBI nr
Match: KAG6600024.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030693.1 Pentatricopeptide repeat-containing protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 484.2 bits (1245), Expect = 7.4e-133
Identity = 239/271 (88.19%), Postives = 250/271 (92.25%), Query Frame = 0


Query: 1   MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIV-KKV 60
           M  YRG+S GFD LVPKK CI N+NKL FRAAS KC H QA Q  TSS T ERRIV KKV
Sbjct: 1   MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKV 60

Query: 61  GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKAL 120
           GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG LNKWIAWETEFPLIAA+KAL
Sbjct: 61  GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKAL 120

Query: 121 RILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTR 180
           RILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILH HTR
Sbjct: 121 RILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTR 180

Query: 181 SISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKM 240
           SISK+LFSRMISLYDHHDLQDK+IEIFADMEELGV+PDEDTVRRVA AF+KLGQ EN KM
Sbjct: 181 SISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKM 240

Query: 241 VHKRYGCKWKYIHFKGERVRVKRDGWDEDDE 271
           V+KRYGCKWKYIHFKGERVRV+RDGWDEDD+
Sbjct: 241 VYKRYGCKWKYIHFKGERVRVRRDGWDEDDK 271

[Close]

BLAST of Moc09g33620 vs. ExPASy Swiss-Prot
Match: Q2V3H0 (Pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g18975 PE=2 SV=2)

HSP 1 Score: 342.8 bits (878), Expect = 3.5e-93
Identity = 166/213 (77.93%), Postives = 191/213 (89.67%), Query Frame = 0


Query: 50  TIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETE 109
           T+  + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYGALNKW+AWE E
Sbjct: 69  TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 128

Query: 110 FPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESL 169
           FP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 129 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 188

Query: 170 WNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQ 229
           WNMILHTHTRSI ++LF+RMI+LY HHDL DKVIE+FADMEEL V PDED+ RRVARAF+
Sbjct: 189 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 248

Query: 230 KLGQEENRKMVHKRYGCKWKYIHFKGERVRVKR 263
           +L QEENRK++ +RY  ++KYI+F GERVRVKR
Sbjct: 249 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 281

[Close]

BLAST of Moc09g33620 vs. ExPASy Swiss-Prot
Match: Q8LG95 (Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana OX=3702 GN=EMB1417 PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 6.1e-45
Identity = 95/206 (46.12%), Postives = 129/206 (62.62%), Query Frame = 0


Query: 66  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKR 125
           +WK R   G+  KA  ++  +    N KE VYGAL+ +IAWE EFPL+   KAL IL   
Sbjct: 45  VWKTRKRIGTISKAAKMIACIKGLSNVKEEVYGALDSFIAWELEFPLVIVKKALVILEDE 104

Query: 126 SQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQL 185
            +WK++IQV KWMLSKGQG TMGTY SLL A   D R+DEAE LWN +   H     ++ 
Sbjct: 105 KEWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKF 164

Query: 186 FSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRY- 245
           F++MIS+Y   D+  K+ E+FADMEELGVKP+   V  V + F KL  ++  + + K+Y 
Sbjct: 165 FNKMISIYYKRDMHQKLFEVFADMEELGVKPNVAIVSMVGKVFVKLEMKDKYEKLMKKYP 224

Query: 246 GCKWKYIHFKGERVRVKRDGWDEDDE 271
             +W++ + KG RV+VK    +E  E
Sbjct: 225 PPQWEFRYIKGRRVKVKAKQLNELSE 250

[Close]

BLAST of Moc09g33620 vs. ExPASy TrEMBL
Match: A0A6J1CC95 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010251 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.1e-153
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVG 60
           MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVG
Sbjct: 1   MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVG 60

Query: 61  KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALR 120
           KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALR
Sbjct: 61  KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMV 240
           ISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMV
Sbjct: 181 ISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMV 240

Query: 241 HKRYGCKWKYIHFKGERVRVKRDGWDEDDER 272
           HKRYGCKWKYIHFKGERVRVKRDGWDEDDER
Sbjct: 241 HKRYGCKWKYIHFKGERVRVKRDGWDEDDER 271

[Close]

BLAST of Moc09g33620 vs. ExPASy TrEMBL
Match: A0A6J1CFD3 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010251 PE=4 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 1.1e-150
Identity = 268/271 (98.89%), Postives = 268/271 (98.89%), Query Frame = 0


Query: 1   MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVG 60
           MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVG
Sbjct: 1   MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVG 60

Query: 61  KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALR 120
           KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALR
Sbjct: 61  KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMV 240
           ISKQLFSRMISLYDHHDLQDK   IFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMV
Sbjct: 181 ISKQLFSRMISLYDHHDLQDK---IFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMV 240

Query: 241 HKRYGCKWKYIHFKGERVRVKRDGWDEDDER 272
           HKRYGCKWKYIHFKGERVRVKRDGWDEDDER
Sbjct: 241 HKRYGCKWKYIHFKGERVRVKRDGWDEDDER 268

[Close]

BLAST of Moc09g33620 vs. ExPASy TrEMBL
Match: A0A6J1FWG3 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447531 PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 2.1e-133
Identity = 239/271 (88.19%), Postives = 250/271 (92.25%), Query Frame = 0


Query: 1   MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIV-KKV 60
           M  YRG+S GFD LVPKK CI N+NKL FRAAS KC H QA Q  T S T ERRIV KKV
Sbjct: 1   MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKV 60

Query: 61  GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKAL 120
           GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG LNKWIAWETEFPLIAA+KAL
Sbjct: 61  GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKAL 120

Query: 121 RILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTR 180
           RILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILH HTR
Sbjct: 121 RILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTR 180

Query: 181 SISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKM 240
           SISK+LFSRMISLYDHHDLQDK+IEIFADMEELGV+PDEDTVRRVA AF+KLGQEEN KM
Sbjct: 181 SISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKM 240

Query: 241 VHKRYGCKWKYIHFKGERVRVKRDGWDEDDE 271
           V+KRYGCKWKYIHFKGERVRV+RDGWDEDD+
Sbjct: 241 VYKRYGCKWKYIHFKGERVRVRRDGWDEDDK 271

[Close]

BLAST of Moc09g33620 vs. ExPASy TrEMBL
Match: A0A6J1K6G2 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111491588 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 4.0e-132
Identity = 237/271 (87.45%), Postives = 249/271 (91.88%), Query Frame = 0


Query: 1   MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIV-KKV 60
           M  YRG+S GFD LVPKK CI N+NKL FRAAS KC H QA Q  TSS T ERRIV KKV
Sbjct: 1   MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKV 60

Query: 61  GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKAL 120
           GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG LNKWIAWETEFPLIAA+KAL
Sbjct: 61  GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKAL 120

Query: 121 RILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTR 180
           RILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILH HTR
Sbjct: 121 RILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTR 180

Query: 181 SISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKM 240
           SISK+LFSRMI+LYDHHDLQDK+IEIFADMEELGV+PDEDTVRRVA AF+KLGQEEN K 
Sbjct: 181 SISKRLFSRMIALYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKT 240

Query: 241 VHKRYGCKWKYIHFKGERVRVKRDGWDEDDE 271
           V+KRYGCKWKYIHFK ERVRV+RDGWDEDD+
Sbjct: 241 VYKRYGCKWKYIHFKSERVRVRRDGWDEDDK 271

[Close]

BLAST of Moc09g33620 vs. ExPASy TrEMBL
Match: A0A5A7UD21 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G00890 PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 1.2e-131
Identity = 234/270 (86.67%), Postives = 247/270 (91.48%), Query Frame = 0


Query: 1   MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVG 60
           M V  G+S GFD LVPK DCI   NK  FR AS  C HNQA QP TS  T ERR+VKKVG
Sbjct: 1   MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVG 60

Query: 61  KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALR 120
           KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG LNKWIAWETEFPLIAAAKALR
Sbjct: 61  KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMV 240
           ISK++FSRMISLY+HHDLQDK+IEIFADMEELGVKPDEDTVRR+ RAFQKLGQEENRKMV
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMV 240

Query: 241 HKRYGCKWKYIHFKGERVRVKRDGWDEDDE 271
           +KRY C+WKYIHFKGERVRV++DGWDEDD+
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRKDGWDEDDQ 270

[Close]

BLAST of Moc09g33620 vs. TAIR 10
Match: AT4G18975.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 342.8 bits (878), Expect = 2.5e-94
Identity = 166/213 (77.93%), Postives = 191/213 (89.67%), Query Frame = 0


Query: 50  TIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETE 109
           T+  + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYGALNKW+AWE E
Sbjct: 69  TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 128

Query: 110 FPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESL 169
           FP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 129 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 188

Query: 170 WNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQ 229
           WNMILHTHTRSI ++LF+RMI+LY HHDL DKVIE+FADMEEL V PDED+ RRVARAF+
Sbjct: 189 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 248

Query: 230 KLGQEENRKMVHKRYGCKWKYIHFKGERVRVKR 263
           +L QEENRK++ +RY  ++KYI+F GERVRVKR
Sbjct: 249 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 281

[Close]

BLAST of Moc09g33620 vs. TAIR 10
Match: AT4G18975.2 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 342.8 bits (878), Expect = 2.5e-94
Identity = 166/213 (77.93%), Postives = 191/213 (89.67%), Query Frame = 0


Query: 50  TIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETE 109
           T+  + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYGALNKW+AWE E
Sbjct: 42  TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 101

Query: 110 FPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESL 169
           FP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 102 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 161

Query: 170 WNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQ 229
           WNMILHTHTRSI ++LF+RMI+LY HHDL DKVIE+FADMEEL V PDED+ RRVARAF+
Sbjct: 162 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 221

Query: 230 KLGQEENRKMVHKRYGCKWKYIHFKGERVRVKR 263
           +L QEENRK++ +RY  ++KYI+F GERVRVKR
Sbjct: 222 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 254

[Close]

BLAST of Moc09g33620 vs. TAIR 10
Match: AT4G18975.3 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 342.8 bits (878), Expect = 2.5e-94
Identity = 166/213 (77.93%), Postives = 191/213 (89.67%), Query Frame = 0


Query: 50  TIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETE 109
           T+  + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYGALNKW+AWE E
Sbjct: 69  TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 128

Query: 110 FPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESL 169
           FP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 129 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 188

Query: 170 WNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQ 229
           WNMILHTHTRSI ++LF+RMI+LY HHDL DKVIE+FADMEEL V PDED+ RRVARAF+
Sbjct: 189 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 248

Query: 230 KLGQEENRKMVHKRYGCKWKYIHFKGERVRVKR 263
           +L QEENRK++ +RY  ++KYI+F GERVRVKR
Sbjct: 249 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 281

[Close]

BLAST of Moc09g33620 vs. TAIR 10
Match: AT4G18975.4 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 342.8 bits (878), Expect = 2.5e-94
Identity = 166/213 (77.93%), Postives = 191/213 (89.67%), Query Frame = 0


Query: 50  TIERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETE 109
           T+  + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYGALNKW+AWE E
Sbjct: 69  TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 128

Query: 110 FPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESL 169
           FP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 129 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 188

Query: 170 WNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQ 229
           WNMILHTHTRSI ++LF+RMI+LY HHDL DKVIE+FADMEEL V PDED+ RRVARAF+
Sbjct: 189 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 248

Query: 230 KLGQEENRKMVHKRYGCKWKYIHFKGERVRVKR 263
           +L QEENRK++ +RY  ++KYI+F GERVRVKR
Sbjct: 249 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 281

[Close]

BLAST of Moc09g33620 vs. TAIR 10
Match: AT4G21190.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 182.6 bits (462), Expect = 4.3e-46
Identity = 95/206 (46.12%), Postives = 129/206 (62.62%), Query Frame = 0


Query: 66  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKR 125
           +WK R   G+  KA  ++  +    N KE VYGAL+ +IAWE EFPL+   KAL IL   
Sbjct: 45  VWKTRKRIGTISKAAKMIACIKGLSNVKEEVYGALDSFIAWELEFPLVIVKKALVILEDE 104

Query: 126 SQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQL 185
            +WK++IQV KWMLSKGQG TMGTY SLL A   D R+DEAE LWN +   H     ++ 
Sbjct: 105 KEWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKF 164

Query: 186 FSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRY- 245
           F++MIS+Y   D+  K+ E+FADMEELGVKP+   V  V + F KL  ++  + + K+Y 
Sbjct: 165 FNKMISIYYKRDMHQKLFEVFADMEELGVKPNVAIVSMVGKVFVKLEMKDKYEKLMKKYP 224

Query: 246 GCKWKYIHFKGERVRVKRDGWDEDDE 271
             +W++ + KG RV+VK    +E  E
Sbjct: 225 PPQWEFRYIKGRRVKVKAKQLNELSE 250

The following BLAST results are available for this feature:

BLAST of Moc09g33620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139301.1	2.2e-153	100.00	pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 ...	[more]
XP_022139303.1	2.3e-150	98.89	pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 ...	[more]
XP_023541595.1	3.3e-133	88.19	pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita ...	[more]
XP_022942519.1	4.4e-133	88.19	pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita ...	[more]
KAG6600024.1	7.4e-133	88.19	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]

BLAST of Moc09g33620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2V3H0	3.5e-93	77.93	Pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Arabidop...	[more]
Q8LG95	6.1e-45	46.12	Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana OX...	[more]

BLAST of Moc09g33620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CC95	1.1e-153	100.00	pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 ...	[more]
A0A6J1CFD3	1.1e-150	98.89	pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 ...	[more]
A0A6J1FWG3	2.1e-133	88.19	pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Cucurbit...	[more]
A0A6J1K6G2	4.0e-132	87.45	pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Cucurbit...	[more]
A0A5A7UD21	1.2e-131	86.67	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Moc09g33620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18975.1	2.5e-94	77.93	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G18975.2	2.5e-94	77.93	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G18975.3	2.5e-94	77.93	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G18975.4	2.5e-94	77.93	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G21190.1	4.3e-46	46.12	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 76..247 e-value: 1.1E-14 score: 56.2
IPR044646	Pentatricopeptide repeat-containing protein EMB1417-like	PANTHER	PTHR46782	OS01G0757700 PROTEIN	coord: 23..266
None	No IPR available	PANTHER	PTHR46782:SF2	OS07G0545900 PROTEIN	coord: 23..266
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 182..216 score: 8.560833

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g33620.1	Moc09g33620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding