Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAGCTCCTCAAACGACCTGAGAAGCTCCGAGGAGACCCAGAGAAGCGCAACAAAGATAAGTACTGTCGTTTTCACCGTGACAACGGCCATAATACGACAAGCTGCTGGGAATTGAAGCGCCAGATTGAAGATCTCATTCAAGATGGCTACTTCAAAAAATTTGTGAGCAAACCGAGGTCTAACTCGGTCGAAAAGAAAGAAGAGACGAAGCGTTCACGAACGCCGCCTCGCCGGAATGATCGACCTGCGGTCATCAACACTATTTTTGGAGGTCCGAGCGGGGGCCAGTCCGGAAACAAGAGGAAGGAGCTAGCTCGCGAGGCCAGGCGCGAGGTATGCATCATCAGGGAGCAGAAACCTACTTGCTCCATCACTTTCGGCGATGCCGATTTGGAGGGGATCCATTTGCCCCACAATGACGCACTCGTGATCGCCCCTCTTATTGATCACGTCCTGGTCCGAAGAGTATTGGTTCATGGAGGCGCATCTGCGAACATCTTGTCCCTCCCAACATATTTAGCATTGGGATGGACCAGGTCACAATTGAAGAAGAGTCCAACACCCTTGGTTGGATTCTCTGGAGAATCAGTCTCCCCAGAAGGGTGCATCAACCTGCCGGTAACTATCGGGCAAGATGCTACCCAGATAA
mRNA sequence
ATGGAAAAGCTCCTCAAACGACCTGAGAAGCTCCGAGGAGACCCAGAGAAGCGCAACAAAGATAAGTACTGTCGTTTTCACCGTGACAACGGCCATAATACGACAAGCTGCTGGGAATTGAAGCGCCAGATTGAAGATCTCATTCAAGATGGCTACTTCAAAAAATTTGTGAGCAAACCGAGGTCTAACTCGGTCGAAAAGAAAGAAGAGACGAAGCGTTCACGAACGCCGCCTCGCCGGAATGATCGACCTGCGGTCATCAACACTATTTTTGGAGGTCCGAGCGGGGGCCAGTCCGGAAACAAGAGGAAGGAGCTAGCTCGCGAGGCCAGGCGCGAGGTATGCATCATCAGGGAGCAGAAACCTACTTGCTCCATCACTTTCGGCGATGCCGATTTGGAGGGGATCCATTTGCCCCACAATGACGCACTCGTGATCGCCCCTCTTATTGATCACGTCCTGGTCCGAAGAGTATTGGTTCATGGAGGCGCATCTGCGAACATCTTGTCCCTCCCAACATATTTAGCATTGGGATGGACCAGATAA
Coding sequence (CDS)
ATGGAAAAGCTCCTCAAACGACCTGAGAAGCTCCGAGGAGACCCAGAGAAGCGCAACAAAGATAAGTACTGTCGTTTTCACCGTGACAACGGCCATAATACGACAAGCTGCTGGGAATTGAAGCGCCAGATTGAAGATCTCATTCAAGATGGCTACTTCAAAAAATTTGTGAGCAAACCGAGGTCTAACTCGGTCGAAAAGAAAGAAGAGACGAAGCGTTCACGAACGCCGCCTCGCCGGAATGATCGACCTGCGGTCATCAACACTATTTTTGGAGGTCCGAGCGGGGGCCAGTCCGGAAACAAGAGGAAGGAGCTAGCTCGCGAGGCCAGGCGCGAGGTATGCATCATCAGGGAGCAGAAACCTACTTGCTCCATCACTTTCGGCGATGCCGATTTGGAGGGGATCCATTTGCCCCACAATGACGCACTCGTGATCGCCCCTCTTATTGATCACGTCCTGGTCCGAAGAGTATTGGTTCATGGAGGCGCATCTGCGAACATCTTGTCCCTCCCAACATATTTAGCATTGGGATGGACCAGATAA
Protein sequence
MEKLLKRPEKLRGDPEKRNKDKYCRFHRDNGHNTTSCWELKRQIEDLIQDGYFKKFVSKPRSNSVEKKEETKRSRTPPRRNDRPAVINTIFGGPSGGQSGNKRKELAREARREVCIIREQKPTCSITFGDADLEGIHLPHNDALVIAPLIDHVLVRRVLVHGGASANILSLPTYLALGWTR
Homology
BLAST of Moc09g29000 vs. NCBI nr
Match:
XP_022158583.1 (uncharacterized protein LOC111025038 [Momordica charantia])
HSP 1 Score: 346.7 bits (888), Expect = 1.2e-91
Identity = 169/181 (93.37%), Postives = 175/181 (96.69%), Query Frame = 0
Query: 1 MEKLLKRPEKLRGDPEKRNKDKYCRFHRDNGHNTTSCWELKRQIEDLIQDGYFKKFVSKP 60
MEKLLKRPEKLRG+PEKRNKDKYCRFHRD+GHNT++CWELK Q EDLIQDGYFKKFV KP
Sbjct: 162 MEKLLKRPEKLRGEPEKRNKDKYCRFHRDHGHNTSNCWELKCQFEDLIQDGYFKKFVGKP 221
Query: 61 RSNSVEKKEETKRSRTPPRRNDRPAVINTIFGGPSGGQSGNKRKELAREARREVCIIREQ 120
RSNSVEKKEE KRSRTPPRR+DRPAVINTIFGGPSGGQSGNKRKELAREARREVCIIREQ
Sbjct: 222 RSNSVEKKEERKRSRTPPRRDDRPAVINTIFGGPSGGQSGNKRKELAREARREVCIIREQ 281
Query: 121 KPTCSITFGDADLEGIHLPHNDALVIAPLIDHVLVRRVLVHGGASANILSLPTYLALGWT 180
KPTCSITFGDADLEG+HLPHNDA VIAPLIDHVLVRRVLV GGASANILSLPTYLALGWT
Sbjct: 282 KPTCSITFGDADLEGVHLPHNDAFVIAPLIDHVLVRRVLVDGGASANILSLPTYLALGWT 341
Query: 181 R 182
R
Sbjct: 342 R 342
BLAST of Moc09g29000 vs. NCBI nr
Match:
XP_022157474.1 (uncharacterized protein LOC111024166 [Momordica charantia])
HSP 1 Score: 337.0 bits (863), Expect = 9.8e-89
Identity = 166/181 (91.71%), Postives = 170/181 (93.92%), Query Frame = 0
Query: 1 MEKLLKRPEKLRGDPEKRNKDKYCRFHRDNGHNTTSCWELKRQIEDLIQDGYFKKFVSKP 60
MEKLLKRP KLRGD EK NKDKYCRFHRD+GHNT+SCWELKRQIEDLIQD YFKKFV KP
Sbjct: 118 MEKLLKRPXKLRGDXEKXNKDKYCRFHRDHGHNTSSCWELKRQIEDLIQDXYFKKFVGKP 177
Query: 61 RSNSVEKKEETKRSRTPPRRNDRPAVINTIFGGPSGGQSGNKRKELAREARREVCIIREQ 120
RSN EKKEE KRSRTPPR +DRP VINTIFGGPSGGQSGNKRKELAREARREVCIIREQ
Sbjct: 178 RSNXXEKKEERKRSRTPPRXDDRPXVINTIFGGPSGGQSGNKRKELAREARREVCIIREQ 237
Query: 121 KPTCSITFGDADLEGIHLPHNDALVIAPLIDHVLVRRVLVHGGASANILSLPTYLALGWT 180
KPTCSITFGDADLEG+HLPHNDALVIAPLIDHVLVRRVLV GGASANILSLPTYLALGWT
Sbjct: 238 KPTCSITFGDADLEGVHLPHNDALVIAPLIDHVLVRRVLVDGGASANILSLPTYLALGWT 297
Query: 181 R 182
R
Sbjct: 298 R 298
BLAST of Moc09g29000 vs. NCBI nr
Match:
XP_022150852.1 (uncharacterized protein LOC111018897 [Momordica charantia])
HSP 1 Score: 335.5 bits (859), Expect = 2.9e-88
Identity = 163/181 (90.06%), Postives = 170/181 (93.92%), Query Frame = 0
Query: 1 MEKLLKRPEKLRGDPEKRNKDKYCRFHRDNGHNTTSCWELKRQIEDLIQDGYFKKFVSKP 60
MEKLLKRPEKLRGDPEKRNKDKYC FH D+GHNTT+CWELKRQIEDLIQDGYFKKFV KP
Sbjct: 1 MEKLLKRPEKLRGDPEKRNKDKYCHFHHDHGHNTTNCWELKRQIEDLIQDGYFKKFVGKP 60
Query: 61 RSNSVEKKEETKRSRTPPRRNDRPAVINTIFGGPSGGQSGNKRKELAREARREVCIIREQ 120
R+NSVEK EE KRSRTPPRR+DRPAVINTIFGGPSGGQ GNKRKELAREARREVCIIR+Q
Sbjct: 61 RTNSVEKTEERKRSRTPPRRDDRPAVINTIFGGPSGGQFGNKRKELAREARREVCIIRKQ 120
Query: 121 KPTCSITFGDADLEGIHLPHNDALVIAPLIDHVLVRRVLVHGGASANILSLPTYLALGWT 180
KPTCSITFGD DLE +HLPHNDA V+ PLIDHVLVRRVLV GGASANILSLPTYLALGWT
Sbjct: 121 KPTCSITFGDTDLEEVHLPHNDAPVVTPLIDHVLVRRVLVDGGASANILSLPTYLALGWT 180
Query: 181 R 182
R
Sbjct: 181 R 181
BLAST of Moc09g29000 vs. NCBI nr
Match:
XP_022153197.1 (uncharacterized protein LOC111020752 [Momordica charantia])
HSP 1 Score: 334.0 bits (855), Expect = 8.3e-88
Identity = 162/180 (90.00%), Postives = 172/180 (95.56%), Query Frame = 0
Query: 1 MEKLLKRPEKLRGDPEKRNKDKYCRFHRDNGHNTTSCWELKRQIEDLIQDGYFKKFVSKP 60
MEKL+KRP+KLRGDP+KRNKDKYCRFHRD+ HNT++CWELK QIEDLIQDGYFKKFV KP
Sbjct: 1 MEKLIKRPDKLRGDPKKRNKDKYCRFHRDHCHNTSNCWELKCQIEDLIQDGYFKKFVGKP 60
Query: 61 RSNSVEKKEETKRSRTPPRRNDRPAVINTIFGGPSGGQSGNKRKELAREARREVCIIREQ 120
RSNSVEKKEE KRSRTPPRR+DRP VINTIFGGPSGGQSGNKRK+LAREA+REVCIIREQ
Sbjct: 61 RSNSVEKKEERKRSRTPPRRDDRPMVINTIFGGPSGGQSGNKRKDLAREAKREVCIIREQ 120
Query: 121 KPTCSITFGDADLEGIHLPHNDALVIAPLIDHVLVRRVLVHGGASANILSLPTYLALGWT 180
KPTCSITF DADLEG+HLPHNDALVI PLIDHVLVRRVLV GGASANILSLPTYLALGWT
Sbjct: 121 KPTCSITFSDADLEGVHLPHNDALVITPLIDHVLVRRVLVDGGASANILSLPTYLALGWT 180
BLAST of Moc09g29000 vs. NCBI nr
Match:
XP_022149377.1 (uncharacterized protein LOC111017807 [Momordica charantia])
HSP 1 Score: 333.2 bits (853), Expect = 1.4e-87
Identity = 167/181 (92.27%), Postives = 172/181 (95.03%), Query Frame = 0
Query: 1 MEKLLKRPEKLRGDPEKRNKDKYCRFHRDNGHNTTSCWELKRQIEDLIQDGYFKKFVSKP 60
MEKLLK PEKLRGDPEKR+KDK CRFHRD+ HNTTSCWELKRQIEDLIQDGYFKKFV KP
Sbjct: 259 MEKLLKSPEKLRGDPEKRSKDKNCRFHRDHDHNTTSCWELKRQIEDLIQDGYFKKFVGKP 318
Query: 61 RSNSVEKKEETKRSRTPPRRNDRPAVINTIFGGPSGGQSGNKRKELAREARREVCIIREQ 120
RSNSVEKKEE KRSRTPPRR+DRPAVINTIFGGPSGGQSGNKRKELAREARREVCIIREQ
Sbjct: 319 RSNSVEKKEERKRSRTPPRRDDRPAVINTIFGGPSGGQSGNKRKELAREARREVCIIREQ 378
Query: 121 KPTCSITFGDADLEGIHLPHNDALVIAPLIDHVLVRRVLVHGGASANILSLPTYLALGWT 180
KPTCSITF DADLEG+HLPHNDALVIAPLIDHVLV +LV GGASANILSLPTYLALGWT
Sbjct: 379 KPTCSITFDDADLEGVHLPHNDALVIAPLIDHVLV--LLVDGGASANILSLPTYLALGWT 437
Query: 181 R 182
R
Sbjct: 439 R 437
BLAST of Moc09g29000 vs. ExPASy TrEMBL
Match:
A0A6J1DWH9 (uncharacterized protein LOC111025038 OS=Momordica charantia OX=3673 GN=LOC111025038 PE=4 SV=1)
HSP 1 Score: 346.7 bits (888), Expect = 6.0e-92
Identity = 169/181 (93.37%), Postives = 175/181 (96.69%), Query Frame = 0
Query: 1 MEKLLKRPEKLRGDPEKRNKDKYCRFHRDNGHNTTSCWELKRQIEDLIQDGYFKKFVSKP 60
MEKLLKRPEKLRG+PEKRNKDKYCRFHRD+GHNT++CWELK Q EDLIQDGYFKKFV KP
Sbjct: 162 MEKLLKRPEKLRGEPEKRNKDKYCRFHRDHGHNTSNCWELKCQFEDLIQDGYFKKFVGKP 221
Query: 61 RSNSVEKKEETKRSRTPPRRNDRPAVINTIFGGPSGGQSGNKRKELAREARREVCIIREQ 120
RSNSVEKKEE KRSRTPPRR+DRPAVINTIFGGPSGGQSGNKRKELAREARREVCIIREQ
Sbjct: 222 RSNSVEKKEERKRSRTPPRRDDRPAVINTIFGGPSGGQSGNKRKELAREARREVCIIREQ 281
Query: 121 KPTCSITFGDADLEGIHLPHNDALVIAPLIDHVLVRRVLVHGGASANILSLPTYLALGWT 180
KPTCSITFGDADLEG+HLPHNDA VIAPLIDHVLVRRVLV GGASANILSLPTYLALGWT
Sbjct: 282 KPTCSITFGDADLEGVHLPHNDAFVIAPLIDHVLVRRVLVDGGASANILSLPTYLALGWT 341
Query: 181 R 182
R
Sbjct: 342 R 342
BLAST of Moc09g29000 vs. ExPASy TrEMBL
Match:
A0A6J1DWK7 (uncharacterized protein LOC111024166 OS=Momordica charantia OX=3673 GN=LOC111024166 PE=4 SV=1)
HSP 1 Score: 337.0 bits (863), Expect = 4.7e-89
Identity = 166/181 (91.71%), Postives = 170/181 (93.92%), Query Frame = 0
Query: 1 MEKLLKRPEKLRGDPEKRNKDKYCRFHRDNGHNTTSCWELKRQIEDLIQDGYFKKFVSKP 60
MEKLLKRP KLRGD EK NKDKYCRFHRD+GHNT+SCWELKRQIEDLIQD YFKKFV KP
Sbjct: 118 MEKLLKRPXKLRGDXEKXNKDKYCRFHRDHGHNTSSCWELKRQIEDLIQDXYFKKFVGKP 177
Query: 61 RSNSVEKKEETKRSRTPPRRNDRPAVINTIFGGPSGGQSGNKRKELAREARREVCIIREQ 120
RSN EKKEE KRSRTPPR +DRP VINTIFGGPSGGQSGNKRKELAREARREVCIIREQ
Sbjct: 178 RSNXXEKKEERKRSRTPPRXDDRPXVINTIFGGPSGGQSGNKRKELAREARREVCIIREQ 237
Query: 121 KPTCSITFGDADLEGIHLPHNDALVIAPLIDHVLVRRVLVHGGASANILSLPTYLALGWT 180
KPTCSITFGDADLEG+HLPHNDALVIAPLIDHVLVRRVLV GGASANILSLPTYLALGWT
Sbjct: 238 KPTCSITFGDADLEGVHLPHNDALVIAPLIDHVLVRRVLVDGGASANILSLPTYLALGWT 297
Query: 181 R 182
R
Sbjct: 298 R 298
BLAST of Moc09g29000 vs. ExPASy TrEMBL
Match:
A0A6J1DBW5 (uncharacterized protein LOC111018897 OS=Momordica charantia OX=3673 GN=LOC111018897 PE=4 SV=1)
HSP 1 Score: 335.5 bits (859), Expect = 1.4e-88
Identity = 163/181 (90.06%), Postives = 170/181 (93.92%), Query Frame = 0
Query: 1 MEKLLKRPEKLRGDPEKRNKDKYCRFHRDNGHNTTSCWELKRQIEDLIQDGYFKKFVSKP 60
MEKLLKRPEKLRGDPEKRNKDKYC FH D+GHNTT+CWELKRQIEDLIQDGYFKKFV KP
Sbjct: 1 MEKLLKRPEKLRGDPEKRNKDKYCHFHHDHGHNTTNCWELKRQIEDLIQDGYFKKFVGKP 60
Query: 61 RSNSVEKKEETKRSRTPPRRNDRPAVINTIFGGPSGGQSGNKRKELAREARREVCIIREQ 120
R+NSVEK EE KRSRTPPRR+DRPAVINTIFGGPSGGQ GNKRKELAREARREVCIIR+Q
Sbjct: 61 RTNSVEKTEERKRSRTPPRRDDRPAVINTIFGGPSGGQFGNKRKELAREARREVCIIRKQ 120
Query: 121 KPTCSITFGDADLEGIHLPHNDALVIAPLIDHVLVRRVLVHGGASANILSLPTYLALGWT 180
KPTCSITFGD DLE +HLPHNDA V+ PLIDHVLVRRVLV GGASANILSLPTYLALGWT
Sbjct: 121 KPTCSITFGDTDLEEVHLPHNDAPVVTPLIDHVLVRRVLVDGGASANILSLPTYLALGWT 180
Query: 181 R 182
R
Sbjct: 181 R 181
BLAST of Moc09g29000 vs. ExPASy TrEMBL
Match:
A0A6J1DI98 (uncharacterized protein LOC111020752 OS=Momordica charantia OX=3673 GN=LOC111020752 PE=4 SV=1)
HSP 1 Score: 334.0 bits (855), Expect = 4.0e-88
Identity = 162/180 (90.00%), Postives = 172/180 (95.56%), Query Frame = 0
Query: 1 MEKLLKRPEKLRGDPEKRNKDKYCRFHRDNGHNTTSCWELKRQIEDLIQDGYFKKFVSKP 60
MEKL+KRP+KLRGDP+KRNKDKYCRFHRD+ HNT++CWELK QIEDLIQDGYFKKFV KP
Sbjct: 1 MEKLIKRPDKLRGDPKKRNKDKYCRFHRDHCHNTSNCWELKCQIEDLIQDGYFKKFVGKP 60
Query: 61 RSNSVEKKEETKRSRTPPRRNDRPAVINTIFGGPSGGQSGNKRKELAREARREVCIIREQ 120
RSNSVEKKEE KRSRTPPRR+DRP VINTIFGGPSGGQSGNKRK+LAREA+REVCIIREQ
Sbjct: 61 RSNSVEKKEERKRSRTPPRRDDRPMVINTIFGGPSGGQSGNKRKDLAREAKREVCIIREQ 120
Query: 121 KPTCSITFGDADLEGIHLPHNDALVIAPLIDHVLVRRVLVHGGASANILSLPTYLALGWT 180
KPTCSITF DADLEG+HLPHNDALVI PLIDHVLVRRVLV GGASANILSLPTYLALGWT
Sbjct: 121 KPTCSITFSDADLEGVHLPHNDALVITPLIDHVLVRRVLVDGGASANILSLPTYLALGWT 180
BLAST of Moc09g29000 vs. ExPASy TrEMBL
Match:
A0A6J1D7S8 (uncharacterized protein LOC111017807 OS=Momordica charantia OX=3673 GN=LOC111017807 PE=4 SV=1)
HSP 1 Score: 333.2 bits (853), Expect = 6.9e-88
Identity = 167/181 (92.27%), Postives = 172/181 (95.03%), Query Frame = 0
Query: 1 MEKLLKRPEKLRGDPEKRNKDKYCRFHRDNGHNTTSCWELKRQIEDLIQDGYFKKFVSKP 60
MEKLLK PEKLRGDPEKR+KDK CRFHRD+ HNTTSCWELKRQIEDLIQDGYFKKFV KP
Sbjct: 259 MEKLLKSPEKLRGDPEKRSKDKNCRFHRDHDHNTTSCWELKRQIEDLIQDGYFKKFVGKP 318
Query: 61 RSNSVEKKEETKRSRTPPRRNDRPAVINTIFGGPSGGQSGNKRKELAREARREVCIIREQ 120
RSNSVEKKEE KRSRTPPRR+DRPAVINTIFGGPSGGQSGNKRKELAREARREVCIIREQ
Sbjct: 319 RSNSVEKKEERKRSRTPPRRDDRPAVINTIFGGPSGGQSGNKRKELAREARREVCIIREQ 378
Query: 121 KPTCSITFGDADLEGIHLPHNDALVIAPLIDHVLVRRVLVHGGASANILSLPTYLALGWT 180
KPTCSITF DADLEG+HLPHNDALVIAPLIDHVLV +LV GGASANILSLPTYLALGWT
Sbjct: 379 KPTCSITFDDADLEGVHLPHNDALVIAPLIDHVLV--LLVDGGASANILSLPTYLALGWT 437
Query: 181 R 182
R
Sbjct: 439 R 437
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DWH9 | 6.0e-92 | 93.37 | uncharacterized protein LOC111025038 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A6J1DWK7 | 4.7e-89 | 91.71 | uncharacterized protein LOC111024166 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A6J1DBW5 | 1.4e-88 | 90.06 | uncharacterized protein LOC111018897 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A6J1DI98 | 4.0e-88 | 90.00 | uncharacterized protein LOC111020752 OS=Momordica charantia OX=3673 GN=LOC111020... | [more] |
A0A6J1D7S8 | 6.9e-88 | 92.27 | uncharacterized protein LOC111017807 OS=Momordica charantia OX=3673 GN=LOC111017... | [more] |
Match Name | E-value | Identity | Description | |