Moc09g14710 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g14710
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Reverse transcriptase domain-containing protein
Location	chr9: 12628549 .. 12633421 (-)
RNA-Seq Expression	Moc09g14710
Synteny	Moc09g14710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGGGTGGGGCGCCTTGTTCAAGTTCCGGAGTCAGCATTTAAGGGAACACTCATCTACTCCCTTAAAGTCGGAGAGGAGTGAATTCCATCTTGTGAAGTTATGTTCCCAGCTCCCCACTCGGTCTCGTCTCCAAAATGGTAGGAATATTGAGTCGGCAACTCGGGCCACTCTCACCTATACAGATCAAAGGACGAGCCCTCACAGGCAGAAGTCCATAACTCACTCAGGATTGAGAATGAGTTGTCTGGTCATCCTAAGAAACAACAATCTATTAGTTAACGATGTTAGATCTAAAGATTGGCTATTTCGTGGTCCGGTCTTATACAAACTCATTGTATAGGATACCCCCACTCGCATGTCTCCACACGAATGACCTGGATCGAGTTGTCTCTAACCTGTACAGAGTGGGTCGTATCCATAGTGTTGCCAGGATAAGGTACCCAGCCTTATCCATATACTATGGACCCTTTAGATTATTCACGGGACATTATCCACTTGTATATCAGGATATATCAAATATATACCTCGTATATCAGGGGTATATCAAATATATACCCAGTACATATATTGTCCCGGTTACACTAAAATAACCTCGGATGTTTAGTTTATTGGATTTTGAACAATGCAATGCTATGAATTCAACAACAAATTTATTGAATAAAACTTTATTGAATATACATTTGTTTTTACACAAAATACAAACTACGAGTTTAGGGCAACACACCCAACACCAGGTCGTTCGTGTGGAGACATGCGAGTGAGGGTATCCTATACAATGAGTTTGTATAAGATCGGACCACGAAATAGCCAATCTTTAGATGTAACACCGTTGACTAATAGATTGCTATTTCATTGGATGACCAGGTAACTCATTCTCAATCCTGAGTGAGTTATGGACTCTTACCCGTGAGGACTCGTCCTTTGATCTCTATGGGTGAAAGTGGCCCAGTCGCCGACTCAATTTCCTACCATTTTTGGGGACGAGACCGAGCGGGGAGCTGGGAACATAACTTCATGAGATGGAATTCACTCCTCCCTGACTCTCGAGGAGTAGATGAGTGTTCTCTTAAATGATGACTCCGGGACTTGAACAAAGGGTCCCACCCTCTCATTGGCTCGAGAGGGACTTTCGGTTATTGGTTGAACCATAACTAGGTTCTTCATTAGAGGAGCAGTGGTATTTAAGGAGTAAGATGTAACTCAGGGGTAAAACGATAATTTGACCCAACTTGAGTTATAAGCACTCGTGAAGGATTGACTTGTCATTAATGGTTGTATACCCATGGACACGAAAATATTATGTAGTGAGAAGACTGCAACTGCGGGTCTTTAGTGGAGTGACTCGTAGTTAACAAATGTTTATTAACTCGGTCAATGAGTTTGACTAATTGATCTTGTATCGTTGGAGCTTCTGATCTGTAGGTCAATTAGGTCCCCTTGCTAGCTCACAACGGGTAAAACGAGGATCAAGAATTATTAAATAGTTTGAAATTTTCAAATTTTATAAGGGAAATTATATAAGGGAATGTATATAATGTATATTGATACATTATATATAAATATATATTAATTTTGGATAAAGATTCAAAATAAATTAGGGAGAAATTATTTGAATGAGATTCAAATAATAAAGGGGAACGTTCTTGCGAGATGGAATGATGTTATAAAAAAAACAAAATATAGGCTTCATCGAGAATACCAAGTCGATCGGCAACTACTGTACAGGTTTCGCTCGCCCATGCTTTAATGAGAGTACTATTTCCATTAGGAGCTTCGCCCTATGCTCTACCATTAAGCTATTTCCGCCAACTACGGTAATGACGAAGCACTACTGAGCAATTCAAGTATCACGTCGAGACGGACGACATGTTTTTCCGTCGGACCACACTCGTCGACCTCCGATTGAGCTACGAGCACGAGTAGGTAGGCGGAAAGCATACCGACAGTTTGAGTCGCGAAAGGGCCGCTTGCATAATTATATTTATTCATATGAATTGGATTCATATTAAATCTATAGGTTATACAATAGAATTATTTGAATTAAAATATATATATTTTTAATTAAATATGTGATATTTAATTAATATTCAAAATTTGACTAATTAATTATTAATTAGATTAATAATTATTAATCAAATTAATTATTATTTAGATTAGTAATTATTAAATAAATAATTAATTATTAATTAGATCAATAATTAATTAATTAAATTATTTAAATGTTAATTAATTTAATTTAAATATAATTAATAAAATAAAATAAAATAAAATAAATAAACTCCCGTGCACAAATGCAGAGGAGTGGTGACGTGGGGTAACTCCCCACGTCAGTTTGTTTCAACTGTACAAAAGTTCTGCAGTTCTTTTCTCTCTCTTTGACCTATAAAAAAAACAGAGATTGGCTCTCAATTTGCTCTCTTGAATAATCCCTTTTGGTTTAAAAAAAAAACTATTGCTCCCACAAGCAAGTACTCGGTATCCAGAGGATAGTAAAGAAGATCTTTTTGGTGGTGTTGAACGGACTTACCGGTGATTCTTAAGAAAGTCTTCAAAAGTAAGTTTCGGTTTCCCCTGCATTTTCCTTTTCATTTGTATGGTTTTGTTCTTCAAAAATTCAAGAACAAGATCTGTTTCCGTTGCGGGATTAGCGTGCATTGAAGGGATGAAATCCCAAGCGGAAGCAATTTATCGCTTGTGATTCAACTCAAATTAGAAATTAAACGTTACTAGTTTTCTAAAAACAGAACATTTCTATTAAAGAAGAGGTTAAGCCTCACGGGAAGAAGAAAATAGCTTACGTTTGTGTATTGTTGATGAGATCTTGTTCCTCAAATCTGGTTTTTGCTTAACACGAATGAATGTTCCCGTGCACACGAACCAAGTGTTGGACACTACCACGTAGTTACCTCACTATATCTTTAGGAACAAAAATGGGATTGTGGGATCCTTGGAGAGGAAAAATAAGAGAATTACACTTGTGAGTGAGAGATCATATTTTCTTGGAAGAAAAAACCAACCAAAACCACCACCATCTTGTGTTTTTTTTTTATGCAAAGACGGAGGAGAGAGCTCCACCTCACCACTTCCCAGCAAAATTGCTGGAGAGTGATGGTTTTTATTAATTAAGTAAATTAAATAATTTCATATTTAATATTAATTTAATTTAATTTAAATAAATTAAATAATTAATTAAATTAAAACTATTTTAATTTAATTAATAATTAATTAAATCTTCATTAATTAAATAAACATAATTTAATTCTAATTAAATTAATTAATATTTGAATCATATTCAAATATTGATTCCTTCCTAACCTATAGTATTTAATACGAATCTAATTCACATTAAATCTTAACCTATAGTTTCTTAATGTGAATCTTATTCACATTATTCTCTCATAATATGTAGTTCTATAATGCATCATCATACATTATATTAAATTGTGTCATACACAATTAGCTCGAATTCTCTTTAATTAAATTTGAACAATTCAATTCCTTCCAAGACTTAATGTTCTTAATTACCCTTTACGAACTAGCAAGAGGACCTAATGGACCTATAAATCAGAAATTCCAACATTACGATATTAATTGATCAAACTCATTAACCACCTTAATCAACATACGTTAACTACGGGTTACTCCACTAAAAACTCATAGCTGAACTCTTCTCACTATAGAATATTTCTGTGTCCATGGATATCGACCATTAATTGAAAGCTAATCCTTCACAAGTGTTTGTAACCACAGATGGGTTAAATTACCATTTTACCCTTGTGTTACATCTTGTACCTTAAGTACCGATGATCCTCTAATGAACAACTCGGTTATGGTCCGACCAATAATCGGAAGTCCCTCTTGGACCAGTGAGAGGGTGGGGCCCCTTGTTCAAGTCCCGGAGTCAGCACTAACGGGAACATTCATCTACTCTCCGAGAGTAGGGGAGGAGTGAATTCCATCTCGTGAAATTATGTTCTCAGTTCCCCACTTGGTTTCTTCCCGAAAATGGTAGGAATATTTGAGTCGGTGACTCGGGTCACTCTCACCCATATAGATCAAAGGACGAGCCCTCATGGGCAGAACTCCATAACTCACTCAGGATTGAGAATGAGTTGTCTGGTCATCCTATGAAATAACAATCTATTAGTCAACAGCGTTACATCTAAAGATCGGATATTTCGTGGTCCGGTCTTATACAAACTCATTGTATAGGATACCCCAACTCGGATGTCTCCACACGAACGACCTAGATCGGGTCGTCTGTAACATTTACAAAGTGGGTCATATCCATAGTATTGTCAGGATAAGGTACCCAACCTTATCCATATACTATATAGACCCTTTAGGTTATTCCCAGGACATTATCTATTTGTATATGGAGAGTATATCAAATATATATTATCCCGGTTCCATGATAATAACCTTGGATGTTTAGTTTATTGGATTTAGACAATTGCAATGAATTCAACAACAAATTTATTGAATATAAATTTGGTTTTACATAAATATAAACTACGAGTTTAGGGCAACACACCCAACAAAGAGTTGCTGAGAGAGTCTTAGTAAAGTTGGGGACATGGAGTGGACAAATTGATTTTGTGATAGTTCGGATGGATGACTTTGATGTAGTGCTAGGAACAAAGTTTCTTTTGGAGCATAAAGTCATCCTTATGCTTCTTGCAAAGTGCCTGGTTGTAACGAGATCCGACCCCATCATCGTTCAGACAAGCATCAAGCAGCCAAGTGAAGTGAAGATAATATCAGCACTCCAACTAAAGAAGGGTCTCCCTCACGACGAACTGACATTTATGGCCATTATTGTAGTAGAAAACTCGAACTCTGAAGAGTCGGTTCCTCAAGAAGTCTAG

mRNA sequence

ATGAGAGGGTGGGGCGCCTTGTTCAAGTTCCGGAGTCAGCATTTAAGGGAACACTCATCTACTCCCTTAAAGTCGGAGAGGAGTGAATTCCATCTTGTGAAGTTATGTTCCCAGCTCCCCACTCGGTCTCGTCTCCAAAATGGTAGGAATATTGAGTCGGCAACTCGGGCCACTCTCACCTATACAGATCAAAGGACGAGCCCTCACAGGCAGAAGTCCATAACTCACTCAGGATTGAGAATGAGTTGTCTGGTCATCCTAAGAAACAACAATCTATTAGTTAACGATGTTAGATCTAAAGATTGGCTATTTCGTGTTCGGATGGATGACTTTGATGTAGTGCTAGGAACAAAGTTTCTTTTGGAGCATAAAGTCATCCTTATGCTTCTTGCAAAGTGCCTGGTTGTAACGAGATCCGACCCCATCATCGTTCAGACAAGCATCAAGCAGCCAAGTGAAGTGAAGATAATATCAGCACTCCAACTAAAGAAGGGTCTCCCTCACGACGAACTGACATTTATGGCCATTATTGTAGTAGAAAACTCGAACTCTGAAGAGTCGGTTCCTCAAGAAGTCTAG

Coding sequence (CDS)

ATGAGAGGGTGGGGCGCCTTGTTCAAGTTCCGGAGTCAGCATTTAAGGGAACACTCATCTACTCCCTTAAAGTCGGAGAGGAGTGAATTCCATCTTGTGAAGTTATGTTCCCAGCTCCCCACTCGGTCTCGTCTCCAAAATGGTAGGAATATTGAGTCGGCAACTCGGGCCACTCTCACCTATACAGATCAAAGGACGAGCCCTCACAGGCAGAAGTCCATAACTCACTCAGGATTGAGAATGAGTTGTCTGGTCATCCTAAGAAACAACAATCTATTAGTTAACGATGTTAGATCTAAAGATTGGCTATTTCGTGTTCGGATGGATGACTTTGATGTAGTGCTAGGAACAAAGTTTCTTTTGGAGCATAAAGTCATCCTTATGCTTCTTGCAAAGTGCCTGGTTGTAACGAGATCCGACCCCATCATCGTTCAGACAAGCATCAAGCAGCCAAGTGAAGTGAAGATAATATCAGCACTCCAACTAAAGAAGGGTCTCCCTCACGACGAACTGACATTTATGGCCATTATTGTAGTAGAAAACTCGAACTCTGAAGAGTCGGTTCCTCAAGAAGTCTAG

Protein sequence

MRGWGALFKFRSQHLREHSSTPLKSERSEFHLVKLCSQLPTRSRLQNGRNIESATRATLTYTDQRTSPHRQKSITHSGLRMSCLVILRNNNLLVNDVRSKDWLFRVRMDDFDVVLGTKFLLEHKVILMLLAKCLVVTRSDPIIVQTSIKQPSEVKIISALQLKKGLPHDELTFMAIIVVENSNSEESVPQEV

Homology

[Close]

BLAST of Moc09g14710 vs. NCBI nr
Match: XP_022155185.1 (uncharacterized protein LOC111022320 [Momordica charantia])

HSP 1 Score: 126.7 bits (317), Expect = 2.1e-25
Identity = 69/87 (79.31%), Postives = 74/87 (85.06%), Query Frame = 0


Query: 106 VRMDDFDVVLGTKFLLEHKVILMLLAKCLVVTRSDPIIVQTSIKQPSEVKIISALQLKKG 165
           VRMDDFDVVLG KFLLEHKVI M LAKCLVVT SDPI+VQTSIKQPS VK+ISALQLKKG
Sbjct: 503 VRMDDFDVVLGIKFLLEHKVIPMPLAKCLVVTSSDPIVVQTSIKQPSGVKMISALQLKKG 562

Query: 166 LPHDELTFMAIIVVENSNSEESVPQEV 193
           +  DE TFMAI V E  NSEE VP+E+
Sbjct: 563 IAQDEPTFMAIPVAEGRNSEELVPREI 589

[Close]

BLAST of Moc09g14710 vs. NCBI nr
Match: XP_023526180.1 (uncharacterized protein LOC111789739 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 109.4 bits (272), Expect = 3.5e-20
Identity = 57/97 (58.76%), Postives = 75/97 (77.32%), Query Frame = 0


Query: 101 DW-----LFRVRMDDFDVVLGTKFLLEHKVILMLLAKCLVVTRSDPIIVQTSIKQPSEVK 160
           DW     L  VRMDDFDVVLG +FLLEHKVI M LAKCLV+T  +PI++  SIKQP  ++
Sbjct: 459 DWTGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVITDRNPIVIPASIKQPGNLR 518

Query: 161 IISALQLKKGLPHDELTFMAIIVVENSNSEESVPQEV 193
           +ISA+QLK+GL  +E TFMAI ++E + +EE+VP+E+
Sbjct: 519 MISAIQLKRGLAREEPTFMAIPLIEEATTEETVPEEI 555

[Close]

BLAST of Moc09g14710 vs. NCBI nr
Match: XP_023537907.1 (uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-19
Identity = 56/97 (57.73%), Postives = 74/97 (76.29%), Query Frame = 0


Query: 101 DW-----LFRVRMDDFDVVLGTKFLLEHKVILMLLAKCLVVTRSDPIIVQTSIKQPSEVK 160
           DW     L  VRMDDFDVVLG +FLLEHKVI M LAKCLV+T  +P ++  SIKQP  ++
Sbjct: 528 DWTGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVITDRNPTVIPASIKQPGNLR 587

Query: 161 IISALQLKKGLPHDELTFMAIIVVENSNSEESVPQEV 193
           +ISA+QLK+GL  +E TFMAI ++E + +EE+VP+E+
Sbjct: 588 MISAIQLKRGLAREEPTFMAIPLIEEATTEETVPEEI 624

[Close]

BLAST of Moc09g14710 vs. NCBI nr
Match: XP_023524533.1 (uncharacterized protein LOC111788429 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-19
Identity = 56/97 (57.73%), Postives = 74/97 (76.29%), Query Frame = 0


Query: 101 DW-----LFRVRMDDFDVVLGTKFLLEHKVILMLLAKCLVVTRSDPIIVQTSIKQPSEVK 160
           DW     L  VRMDDFDVVLG +FLLEHKVI M LAKCLV+T  +P ++  SIKQP  ++
Sbjct: 528 DWTGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVITDRNPTVIPASIKQPGNLR 587

Query: 161 IISALQLKKGLPHDELTFMAIIVVENSNSEESVPQEV 193
           +ISA+QLK+GL  +E TFMAI ++E + +EE+VP+E+
Sbjct: 588 MISAIQLKRGLAREEPTFMAIPLIEEATTEETVPEEI 624

[Close]

BLAST of Moc09g14710 vs. NCBI nr
Match: KAA0051250.1 (uncharacterized protein E6C27_scaffold2143G00060 [Cucumis melo var. makuwa] >TYK28093.1 uncharacterized protein E5676_scaffold1510G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 105.5 bits (262), Expect = 5.1e-19
Identity = 77/191 (40.31%), Postives = 109/191 (57.07%), Query Frame = 0


Query: 5   GALFKFRSQHLREHSSTPLKSERSEFHLVKLCSQLPTRSRL-QNGRNIESATRATLTYTD 64
           GAL KF S   ++   T    ER   ++  L +Q PT+S +  +G      T A     +
Sbjct: 183 GAL-KFLSSLQKKVGETNTPVERGLMYVDNLINQKPTKSTMVDSGATHNFITEAEAKRLN 242

Query: 65  QR--TSPHRQKSITHSGLRMSCLVILRNNNLLVNDVRSKDWLFRVRMDDFDVVLGTKFLL 124
            R      R K++  + L +  LV  +   + +           V+MDDFDVVLG +FLL
Sbjct: 243 LRWEKDAGRMKAVNFAALPIIRLV--KRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLL 302

Query: 125 EHKVILMLLAKCLVVTRSDPIIVQTSIKQPSEVKIISALQLKKGLPHDELTFMAIIVVEN 184
           EH+VI M LAKCL +T S P +VQT ++QP  +K+ISA+QLKKGL  DE TFMAI +  +
Sbjct: 303 EHQVIPMPLAKCLAITGSTPSVVQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSS 362

Query: 185 SNSEESVPQEV 193
            NSEE+VP+++
Sbjct: 363 KNSEETVPKKI 370

[Close]

BLAST of Moc09g14710 vs. ExPASy TrEMBL
Match: A0A6J1DLQ6 (uncharacterized protein LOC111022320 OS=Momordica charantia OX=3673 GN=LOC111022320 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.0e-25
Identity = 69/87 (79.31%), Postives = 74/87 (85.06%), Query Frame = 0


Query: 106 VRMDDFDVVLGTKFLLEHKVILMLLAKCLVVTRSDPIIVQTSIKQPSEVKIISALQLKKG 165
           VRMDDFDVVLG KFLLEHKVI M LAKCLVVT SDPI+VQTSIKQPS VK+ISALQLKKG
Sbjct: 503 VRMDDFDVVLGIKFLLEHKVIPMPLAKCLVVTSSDPIVVQTSIKQPSGVKMISALQLKKG 562

Query: 166 LPHDELTFMAIIVVENSNSEESVPQEV 193
           +  DE TFMAI V E  NSEE VP+E+
Sbjct: 563 IAQDEPTFMAIPVAEGRNSEELVPREI 589

[Close]

BLAST of Moc09g14710 vs. ExPASy TrEMBL
Match: A0A5A7U7S3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1510G00040 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.5e-19
Identity = 77/191 (40.31%), Postives = 109/191 (57.07%), Query Frame = 0


Query: 5   GALFKFRSQHLREHSSTPLKSERSEFHLVKLCSQLPTRSRL-QNGRNIESATRATLTYTD 64
           GAL KF S   ++   T    ER   ++  L +Q PT+S +  +G      T A     +
Sbjct: 183 GAL-KFLSSLQKKVGETNTPVERGLMYVDNLINQKPTKSTMVDSGATHNFITEAEAKRLN 242

Query: 65  QR--TSPHRQKSITHSGLRMSCLVILRNNNLLVNDVRSKDWLFRVRMDDFDVVLGTKFLL 124
            R      R K++  + L +  LV  +   + +           V+MDDFDVVLG +FLL
Sbjct: 243 LRWEKDAGRMKAVNFAALPIIRLV--KRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLL 302

Query: 125 EHKVILMLLAKCLVVTRSDPIIVQTSIKQPSEVKIISALQLKKGLPHDELTFMAIIVVEN 184
           EH+VI M LAKCL +T S P +VQT ++QP  +K+ISA+QLKKGL  DE TFMAI +  +
Sbjct: 303 EHQVIPMPLAKCLAITGSTPSVVQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSS 362

Query: 185 SNSEESVPQEV 193
            NSEE+VP+++
Sbjct: 363 KNSEETVPKKI 370

[Close]

BLAST of Moc09g14710 vs. ExPASy TrEMBL
Match: A0A5A7SQA2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G005090 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.5e-19
Identity = 55/87 (63.22%), Postives = 69/87 (79.31%), Query Frame = 0


Query: 106 VRMDDFDVVLGTKFLLEHKVILMLLAKCLVVTRSDPIIVQTSIKQPSEVKIISALQLKKG 165
           V+MDDFDVVLG KFLLEH+VI M LAKCLV+T   P +VQT ++QP  +K+ISA+QLKKG
Sbjct: 63  VKMDDFDVVLGMKFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLKKG 122

Query: 166 LPHDELTFMAIIVVENSNSEESVPQEV 193
           L  DE TFMAI +  + NS E+VP+E+
Sbjct: 123 LSRDEPTFMAIPLKSSENSGETVPKEI 149

[Close]

BLAST of Moc09g14710 vs. ExPASy TrEMBL
Match: A0A5D3C8W7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00190 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 3.2e-19
Identity = 54/87 (62.07%), Postives = 70/87 (80.46%), Query Frame = 0


Query: 106 VRMDDFDVVLGTKFLLEHKVILMLLAKCLVVTRSDPIIVQTSIKQPSEVKIISALQLKKG 165
           V++DDFDVVLG +FLLEH+VILM LAKCLV+T S P +VQ  ++QP  +K+ISA+QLKKG
Sbjct: 63  VKIDDFDVVLGMEFLLEHQVILMPLAKCLVITGSTPSVVQVDLRQPDGLKMISAMQLKKG 122

Query: 166 LPHDELTFMAIIVVENSNSEESVPQEV 193
           L  DE TFMAI +  + NS E+VP+E+
Sbjct: 123 LSRDEPTFMAIPLKSSENSGETVPKEI 149

[Close]

BLAST of Moc09g14710 vs. ExPASy TrEMBL
Match: A0A5A7UAP7 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G00960 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 5.5e-19
Identity = 54/87 (62.07%), Postives = 69/87 (79.31%), Query Frame = 0


Query: 106 VRMDDFDVVLGTKFLLEHKVILMLLAKCLVVTRSDPIIVQTSIKQPSEVKIISALQLKKG 165
           V+MDDFDVVLG +FLLEH+VI M LAKCLV+T   P +VQT ++QP  +K+ISA+QLKKG
Sbjct: 267 VKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLKKG 326

Query: 166 LPHDELTFMAIIVVENSNSEESVPQEV 193
           L  DE TFMAI +  + NS E+VP+E+
Sbjct: 327 LSRDEPTFMAIPLNSSENSRETVPKEI 353

The following BLAST results are available for this feature:

BLAST of Moc09g14710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155185.1	2.1e-25	79.31	uncharacterized protein LOC111022320 [Momordica charantia]	[more]
XP_023526180.1	3.5e-20	58.76	uncharacterized protein LOC111789739 [Cucurbita pepo subsp. pepo]	[more]
XP_023537907.1	1.3e-19	57.73	uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo]	[more]
XP_023524533.1	1.3e-19	57.73	uncharacterized protein LOC111788429 [Cucurbita pepo subsp. pepo]	[more]
KAA0051250.1	5.1e-19	40.31	uncharacterized protein E6C27_scaffold2143G00060 [Cucumis melo var. makuwa] >TYK...	[more]

BLAST of Moc09g14710 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc09g14710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DLQ6	1.0e-25	79.31	uncharacterized protein LOC111022320 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A5A7U7S3	2.5e-19	40.31	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SQA2	2.5e-19	63.22	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5D3C8W7	3.2e-19	62.07	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold65...	[more]
A0A5A7UAP7	5.5e-19	62.07	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of Moc09g14710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g14710.1	Moc09g14710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity