Moc09g13970 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g13970
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ribonuclease H
Location	chr9: 11911678 .. 11923034 (+)
RNA-Seq Expression	Moc09g13970
Synteny	Moc09g13970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCGGCACCCAACCTATAAGCTTGAGGTCGCCCACATGAAAGCACGAATGGAGGTTGTGATGGAGGCGCTGCAAGGTACTAGAGTCCCCCTCCATGAGCTATCTGAGCCTGAGATCCCCGAGGCCTTAGGAAGGGTAAAGCAAAACCGACTGATCAGAGGGCAATGACGTCGGTGAACCCTCACCCCTCCAAGTTGGTCGTTGGGGGAAACAATCGATCTTGACCCAATGAGGACCTCCGCTCATTCCTCTCAGCTCGCTCTTCGTAGAAAAAAGATAAGGTTCTTCGGAAGACCCTAACTCGCAAGCGGACATTGACTGTGCTGCGATTGACTCGGTCTGAATTAGTCAACAATGCCTGCAACTCTGACTTGATGTCAAAACCTATAATATAGAGTTTTGCTCCATTTCTCAAAGTATAGATCAAACTTATACTGACCTGACCGTCCAAGCTTTTATCTACCTGTGTAGGTTTTGACGTTCATCGGCCATCCAAGTTCGAGCTTCACGGAATTGATCATTTTGTGATCACAGAACTAGGTGATACAATAATTTGAAATATAAAAAACAAAGAATATATAATTTGAATAGACAACAGAACAAAATAATAAATGTTATTTGGCCCACTACCCCAGAAGTATATCCAAGTGAAAAGGTGAGCTAAGTTAAAAGTCTATATAGTTAGAAGAATGAGGGAGATGAAAAGTGGGATTTAAAGCCATTGTGGATGTGTGGATTCTTTTCAAGTGGGGTGATATTTAGGTGAGTGTGTGATTTTGGAGGGTGGAAAGTTTCTTTTTTTGTCTAAATATTATTTTGGTTCAATTTAGTTCTTATACTTTCAAAACATCTTGATTTATTAACTTTTAATTAACTTTTATTTATTTTAGTCTCGACCATTTTAGTCCATCACATTTTTTTTACCTTATTTCTTTAAATCACAATTTTAGTCTCAGTAAATTTCTTAAAATGTATCCATAAATTTGTATTAAAAGGTTTCTATGGTGCGTAAAATGTTTGTTAAAATTTTTTAAATAAGGACCAAATTAATCACTTTCTAAAAGTACATGATCAAAATGGACGTTTTAAAAATATAAGAACTAAAATAAAGAGCAATTGATAGTATATGAAAAAAAAAATATTTTGAAAGTACATGAACCAAAGATGAACAAAAGTAAAAAAGTAAACAATGAAAATAGTATTTAATCCAAGTTTTATTTCGTTTTGAAACATTTACTTATCAAATATATTGAATTAGTTAAAATCATCTTGGGGATGTAGCTCACATGGTAGGGCGCTCGCTTTGCATGCGAGAGGTACGGGGTTCGATACCCCGCATCTCCATTTTACTCTTTTTTCCTTTAAATTTGGTCCTTCTAGGAAAACCTTAAAAAGGCTTCTAAAAATTTGCAGAACTGGGCCGGCCCAGAACAGAAATAAACAATAAGTTATATCAGATATTGTAAATAATATACAATTAAGATTTTTTTAATTAATTAATTCGTTTTCTTTTTTATATTTTACCGTATTTGCATGATTACAGAATTTCATCTTAAATTTAATTATTTTAAATTATTTAATTATTTTCTTTTTATTTAAATCTCATTTCTTCCCTTCTGTCTCTATATTTAAATCTCTACCTTTAAGTTGTATTCAAAGAAAAAAAAAAGAAAAGAAATTTCCTATCTTTTTAAGATAGTGTTATAGCATGATTTGGATTTAGGTTCCAGCATGATGCTCCCACGAAATATTTGTGCTCGTAAAAAATCTACACATCAACGTGGTGGTAAGCCCAAAATGGATTTAGGTCTCAGCACGATGCTCCAACGAAATATTTGTGCATGTAAAAATCAAGAATTTACAGTAGGTGTCACTATTTGTCACCCGATATTGAAAAATGGTCCGATCATATTTGATAATAAAAAAATGTCCATTTATATTCTTTAACTGTTTTTCAAGTTTCATATTTGACACTTTTACCCTTCTGTTATTAGTTTTAAAATCAAAATATCCCGACTTCCATGATCTCTCTTATATTTTATCTCTCCTTAATTCTAGCTATTATAAATTTAGATATATATGAAGCTAGAATTCGCCAATTATAAGGAGACATCATATCGAGAAGATGATCAGAGAGGGAATCTATCAGAGCCAGTTGATGGGGAGTGGAGCGAGGGAACACCGGTGGGCAACGCAGTGGGTTGCAAGTGGGGTGGGGTAAAGGAGAGAAATGCCTATATGTTGAGTTTCCAGAGTTCGTGTAGCTTTTTTATTTGAGGTAGGGTGCTTTGTACTTTTGTATTAGTTGTTCACAAAATATATACCTTATTTCTTCACACTATTTGTATTTCTTTAGTTAATCTTGTTCGATGTATTTGTTACTCTCTCCTTATTTTTATATTTTTGTACTAATTGTTCACAAAAATATATCTTATTTCTTCACATTATTTGTATTTATTTAGTTGATCTTGTTCACTATATTTGTTACTCTCCTTATTTTTATATTTTTGTATTAATTGTTCAAAAAAATACACCTCTCTTCACCATATTTGTTCTTTTATTCACCATATTTGTTTATCTGTTCACCGTATTTGTTGTATTTTTGTGTTCACCGTATTTGTTATACTTTTGTTTCTATGTTCACCATATTTGTTATCCGTATTTGTTGTATTTTTGTTTCTCTATAACCATATTTGTTGTTTATTGTATTTTTGTTTCTTTGTTGCCCGCATTTTTTATTTGTTGTTCTTGTTTCTTTGTTTACCATATTTGTTATGTTTGTTTATCAATTTGTTCTAGCTTGAGTGTTATTTGAATTTCTAATTATTTGTTTTCCTTAGATTTGTTAGTATCTCTAAAATTGATTAGAAAATTATTTGAATTGAAAAATATAGATAGGATTCTTAAAATATTTGAATTATCCTATAAAGATGGTTAGGTAGGATTCTCCTATGAAAAAAGAAAAATAACCAATTAATTTTAAAATTATTTTAGAAGAGGATAATTTCGGCTGTAAAACATTAGTACAAATCTTACTTACTTGGCCATTATTGAAAAGCGAAAGTTGTTTGACCCATATTTTGAAATTGCCTATTTTAAATGGGTATATCTATTGTTACTCTCCAAACAAAAACTGTAAATCAATGTGGTGGGAAGCCCAAAATAGTCTAATGAGAAAAATAGTTTAGTTGAGAATAGCGGATTGTCAAAACGTAATTTAACCCATAACAACTCCAACCTGCTCTATTAGTATGATGGTGTTCATGGATTCGGATCCTTGGGTGGGCACGTCATAAAATCATTTTTAGAACTATATATCTATCTAAAACGAATTTTACTTATTAGCATTTTTACAAAAAAAATTTAAACTTTCATTAATTATATTATATTTATTTTTTATTTTGAATTTGAACTTGAACTTGAACTAGTTTGAATTCATTTTCTCTCAATTCTTTAGAATTTATTTTAGTCCCTTGGACTAATGGACCAACTCATGATTTCCAAATTTTGATTTTATTAACTTCAACTAATCTTGATAAAAGTACCTGCTACGCCTTCACAGAAGTTGGTAGTTTGATGATGTATGCTCTAAACTCGTGACATTAGGTAGATTATTTCGATATAAATAAAATAAACTTAATAATTAATCTGCATCTTGGTGTGAAATTGACACTTAATACTTAATTGCTTCTAAGATACCAAAAGTGTTTTTAAACGTTGTATGTAATGAAAATACGAGAGGATCCAATTTTACTGTAATAGCTTTAATAGTCTACGGTATATAGATAGGATTGGAGCCTTCTAATGACATTATTGCTACACTCACTTTGTAATTGTTACAAATAATCTTATCTCGATGGTTCATGTGCTCATATTGTGAGTGTATGGGCCACGATTTGTATTTTTAAATAAAAAATATATTTTTCATCTAATTAAATTAATTTTTTTTTAAAGAATTTATTCGTTCAACTATTTATATCAAAACAAATCAAAATTTATTAAAAATTCTTTACTAAATATTTTAAATTTTATTATTATTTTTTCAATATTTGTATGGATAATTCAGCAATATTTTATTTATTTATTTGTCCATTCATCATATTTTATTTAGAACAAAGTAATATAAAATGATGAATATATAAAATCATAATTTTTGGTATTTGTTTTACAATATTTTTAATATTTATACTAAATAAACTAATATGCAGAACGTTTTTTTTTTTTTTGAAAAATCTGCATAGTGCTTTATTATAATTTAATTTCAATATTACTTAATTTGAGTGTTTATAATAAATAAATATAATATTATATTTAAGAAGAAATTACTTTTTACTTTAAACTTTGGTAAGTTGTATCATTTTCACAATAAACTTTCAATTTCTACAAATTAAATGTTGAATTTAGATAAGTGTTACTGCAATTTTGACCTTCTACTCAATTCCTGATAATTTACCTATTAATTTAAAAAAAAAACATTTACCTATTAACTTAAGCAAAAAGCATTGTAAAAAATTAAAAAAATAAAAAAACAAACAAAAACCCACTTATTTAACAGAAATAAGCTTTTGTTCAAATCAAGTTTGAATAATTGAAAAAAAAATCCATAATTAAAAAAATATAATGTAACTTACAAAATAAAAAAAAAACCTCTAATATCGTTTTTGTAACTCTATCAATTTCATACCAGATATATGTGTTTATTATTTGACACCTATGATAATATTTTGTTCAACAAATTTTCTAATGAAAATCTATAAAATAGTAACAATTGCAATACTTTTTAAAATTTTAGGTGAAAATTATAATATGTTGATATTTTTCCATGATGTTTATATGTATTTGCATCCCTACACTGAACTTGGATTCACCACTATGTGAGTGGAGGTATCATATGCAATGGGATTCATAAGGCTAGACTGTATGATGTGTCTTACCGTTTCTGGTAAGATCATTAAAGAAAATGCATAAATATCACTAAGATGATCATATGCATATTTGATCTTAATCATGAGTGTGTTATGAACTTCAGCCTGATTGAGTGCTCTTTGATTAATTCACATGAGTGGGAGTGACGTGAAAATTCACCCATAAGTCTTTTGTTTTGAGAACACATTCAAGTGGAGAGTTGAAAACATTCATACACAAGAACGAATATGTAGCCTTTCAATAGTGGGAAGTGCAAATTATGCACTAATCCCTATTGAGTGTGCATATAAGTCATTCCCATAAAGTGCTGGTTCGAAGCTTAGCATGATAAGATCATGGAAGGCTATCTCCATTGGAGAACTAGAAGATTTAAGGAGTAAAAGATGGGACCAAGAACAAAACGGTAATTTCATTTAGATGGGACGATGGATCACTCTGTGAAGAATCAGATTAGCGATTCTTGTTATATTAATGGACAAAGCTCATCTATAGTGCATAAAGGTGCAACTATTGACACCAAAATAGAAAAAGAAAACTAAACTTTAGTTACATTCTCCAAGTATATATATACACATTGGAAATATCAAATAATAGAATTAGTTAATTACTTAAATAACTAACTAATTATAGCCTAACTTATTCCTATTACTCCCCCGCAAGACGGGCTGTAAATATCGAGAATACCCATGTTGGATAATAAGGAAAAGAAAGAGGAAGCAGGAAGTGGCTTAGTAAAGAGATCGGCAAGCTGCGAATGATTTCGAATAGGAAGGAGCTTGAGAAAGCCATCAACCAGCTGATCATGAACAAAATGACAGTCCAATTCAATGTGCTTAGTCCGTTAATGAAAAACGGGATTGGAAGCAATATGCACAGCAGCTTCGTTGTCACAAAATAAAAGTGCTGGTCGAGAAGAAGACACTTGAAGATTAGACAGTAGATGAGAAAGCTAAAGTAATTCACAAAAAGCAACAGCCAAGGCACGACACTCTGCTTCAGCAGGAGATCGAGATAGTAGTCGGTTTCTTGGACTTCTAAGATATCAAAGGATCTCCCAAGAAAACACAAAATCCAGTAGTTGAAGACCGAGTACCAAGGCAAGAAACCCACTCATAATCAACAAAGGCCTTGAGCTGAAAAGAGGAACAAACGAGAAGAAAAATACCTTGCCCCAGGGCATTTTTCAAGTAGTGTAATAAATGATGTGCTGCTGCTAAATGTGGCTTAGTGGGCTTAGAAACAACTTGACTCAATTTGTGAACAATAAACATGATGTCAGGTCCAGAAATATTCAAGTACAAAAGGTGACCAATGAGTCTTCAATAGACAGAGGCCTCAGGGAGCAATTCATCATCAGAAAAGCGAAGCTTCAACAAGGGATTCATAGGAACGACAGTAGGCTTGGAAGCCAAAAGTCTGCATCCTCAATGAGCTGAAGAGCATAATTCCGCTAAGAAATACATATACCAGCTTGAGAACAAGCAATTTCAAGGCCAAGAAAGTATCCAAGAGATTCCAAATCCTTAAGATGAAAATGAGCATTGAGCAAGGATTGCAACTACTCAAGATCCGAAGCACATGCACCAGTTATAAGAATGTCATCCACATATAAAAGTAGGGCAATGAATTGAGAACCAGAGCCCCAAACAAAAAGAGAGTAATCAGCCTTGGATTAGAAAAAGCCAAAAGATATTAGGTAGTAGAAAACTTCGCAAACCATTGACGATGGGCTTGTTTCAAGCCATAAATGAACTTGTTCAAACGACATACAAGGCGCTCCCCCTTAGGAGGAACATCAACTTGAGGTTTATAACCCAAGGGCAAATCCATGTACACTTTCTTAAAAAGATCATCGTGCAAGAAGACATTATTTATGTCCAACTGAACAAGAGGACAATTCTTAGAGACTACAATAGTGAGAAAAACTCGAACGATAACCAGTTTTGCCACTGGAGAAAAAGTCTCAATAAAGTCGAGACCCTTTTGTTTAGTGAAACCATTAGCAATCAGATAGGCCTTATATCGTTCAATAGAACCATCGGCCTTATGCTTGACTTTATACACCATTTGCACCTGTTAGGGTTGATTTTTTACTATAGAAACATGTGTCGGTAGCCTTGTTTGACCACGTTTTTGACCTATTTCCCATTATTATTTGGCCAAAAGGATCACATATTCTTAAAGTAGAACATACATAGATTATTTCTGTATAAAAGTCAAACTATGGTACTTTAGGAAAAATATGAGATAAATGCGGTCAAAGTTGGAAGAAAATAACAGAATTCTGTTTTTTTTTTGCAAAATTGCGCCCGGCGCATTTTTGGAGGGCAATTTGTCAAAACATACTTTTTGATTAATGAAGGGCAATGAGGACATTTCCCACATGTTTAAAATCATGAGTCCAAGTCCAAGTGAGGTGGTTAGGTTAATCTCAACCCTTTTCCACTTAAAATGGAGGGGAGTTTCAACCAACCTATGGTGCTATAAAAAGAAGCCATCCATCCCTCGGCAAATCATCTCTTCTAAGCTTCATTTCATCTTCTTTTAGATGCTCTCTAGTTGTGGAACACGTTTTTAGGGTTTATGTTCATGTTCTAATTGTTCATTTCTTTGTTTTTCACGCTTTTACCTTTCGTATTGCTTTAAATTTGAATTCTTACTTCCGTTCTTTGTTCATTCTGTTATCTTAAAGTTCTTTAGCGAGTTTCAACTCTCCTCACGCTCGAGAGAGAAGAGGGTCAAGCTAGAACTCCTTGTACGACTTATTTATTCATTTAAATTCAATGAAAAATACTTTCTTTATGTTTTCATGCATTTACTTTCATCTAATTATGTTCTAAATTAGTTATCAACCTCCTTGTGGAATGCGTTAGTCAAATGATTTGATTTTCAACATGCTCGGAATTTTGGCCAGATTGCGCCTGACACTTTTTTGGGTTGGTTTCTAAAAACTTTTCTTTACGCCTTTTTTCCATTCGGCCGGTGGGAACTTGATTTGTATACCAAAGCCCAACCATGAGAAAGGTGAGTTAAATAAAATAATAGGAAACCAATATGGGATGTGACTTAGTAATAAGCACATAAAATATGGTCCTAGGCATAGGTCCTCTGACCCATAATGCAAATGAGTTGGTAGATATCCTCTAGGATTGTAATCACACATAGGAATATGATTGTAGGTTACCCTAGCTTCTGCAGCAACCAAAAGCGGTAGTGAAAGAGTAGAACTCAAATCCCAAGAAAAGCCAGGAATTGCACCTGGTGCATTTTCCCAGCATAGTGTGTTTTCCATGTTTTGCATCAAAACTAAGGTAGGAGACAAGGAGGTTGAATTTCATTAAATTGCTTGATAGTTAAAACCCCAAATAACAACATTTCACCATTATTTTCTTCCTAAATCACAATTACATATTTGAACCATTTCACTGCATTACTTGATTTTGAAAAGCAACAAGTCCCTGAGGATTCGACTTTGGATTACTTCCGAGTATTACTTGTGACCGTGTGTGCTTGCACGAGTCTCTAATCTTTTTAAACATAGAGAAAGTCCCAACAGCACCAAATAGAATGTTTCCCATGAGGAAGAGAACAATACTCCAAGTATTATTTGATTCCATAACATGAAGCTCTTCACGCATATTTTGTTGCCAATGTTCAAATGGAGCAACCTGATGGTAAAATTGGGTTCAAAATGAGAAGGAACTGCCAAAGAGAATGCCCGAAAGGATAGTGAAAGAGAAGAATATGAAAGATAATGATGTAAAGGGTATCGAGTGTGTAAAGAAGGCAAATGTGAATTAGGCTACAATGATAGTTTTGAAGATAAATAAACAGTTTATGCACTCTAGTAGATCGGCGAAGAGGGGCTACAATAGGAACATTAGTGGATGGAAGATCATTTGAGGTAGAAAGGATAAGTAATGGTAGTTGAGGCAATAGGGTCAACTGATGAAAAAATGTCATTGGTAGGTGTTATACAAAGGAAAACCACAAATAAACCAACCAAGGGAACATAAGAGAATCGACGAGATGGCCGGCCAAACCGAGCCGAGCCGACCTGCCGAGCCAAGTCGAGCACGGCCCATTGTCGAGTTCGACATCCTCCCTCTTCTGTTATCCACGATGCCTTGGACCTTACGACGGTTATCTAGGGCTCACCTAGAAGGCTTTAGAACTCTCCAAACAACTATAAATAGACTATGCAACCTAACTCTAAGGAAAGCCGAATTCGACCCTTGAATTCTATTACTCTACTGCTCCCCCTTGCTAACTTATGCATCGGAGTCCATGTGACAAGTATCACACCGGTCTAGTCTTGTTCGATTTTGCAGGTCTTTGAGTCCCTAATAATCAAGCTTGGTGCGAACCTCGAGAGGAACCGGGAGAGCATAATCCACGCATCAACAATTGGCACCGTCTGTGGGGATGATACAGTCCGAGCAAGCTTGGCCGAGACGAAGCCCAGATCCGAGGGAGGTAGAATGGAGCGAATCGACGCGAGCCCTGGTGGAGGCAGATTCGAGGCCGGTAGAATGGAGCAAATCGACGCGAGCCCTAATGGAGGTAGATCCAAGGAGGGTAGAATGGAGCGAATCGACATGAATCCTAGTGGAGGCCAGCAATGTTTCGAAAAGAAGAGCCTGAACAAGGCTGCCGACCACTCGGGGGAAGTAAGTCTGAGCCCTAGTCATCAACTAAATCCGACCACCCCCGATAGGGGAGAACCGGCTGAGGAGGTAGAATCTCTCCCTCTGACAGCCAAGGATCGTTCGAGTAAACATCGGAAACAGGTTGGGGAATGAGGAAAGAAAGAGCCAAAGGGCAAACAGGTAAGGCCTGTCCAAAGGATTCTTTTCCCTTTCCCCGAATAGATCAACCGATTAACGCTACTGCTGGACATGAAAGGTTGAGTTTTATGGATGTCTACTCCAGATATAATCAAATCAAGATGCATTTACCAGATCAGGAGAAGACCTCTTTTGTCACGAGTTGAGGTTTATATTGCTACACGGTAATGCCGTTCGGGTTGAAGAGTGCAAGCGCAACCTACCAACAGATGATAAATCGAATGTTTGCAGCTTTAATTGGTAAAAATATAGAAGTCTACGTGGACGACAAGCTGGTAAAGAGTTGGAAAGACAAACAACATGAGGAAGATTTGGCAGAAGCATTTGACGTTTTAAGGAAGTACAAGATGAAGCTAAATCCTACTAAGTGCACGTTTGGAGTAACCTTAGGCAAGTTCCTGGAATTCCTGGTACACTAAAGGGGAATCGAAGCCTAGATAAGATCAAAGGTGTTTTGGAGATGGATCCACCTAGAAATCTAAAACAACTACAGGGCCTCAACGGAATGATAGCAGGTTCAACAGGTTTGTTAGCCGCTTAATTGACAAGTACCTGCCATTCTTCAAAATCCTAAGGAAGAAAGGGCAATTTGAATGGACAGAAAAGTTTGAGGCTGCCTTTAAAGAGCAAAGCAGTATCTGGGGGCAGCCATGCTCCTCTCAAAACCGATCGCTGGTGATGAACTCTACTTGTACTTAGTTGTATCCAACACTGCAGTGAGTTCCGCGTTGATAAAAGAAGGTGAACGACAATTTTCAGTCTACTATAAGAGTAAAGCGATGGTAGACGCAGAGCTTAGATACCCACAGGTGGAAAAATTGGCATTGACGCTGGTCACCTCGGCTCGGAGGCTACGTCCGTATTTCCAAGCCCACAAAATAACTGTCCTCACCAATTTTTCCCTGCAACAGATTTTGCAAAGGCCAGACACTTTAGGACGATTGGTAAAGTGGGCCGTGGAGCTCAGTGAGCACGACATCCACTATAAGCCAAGAGTTGCTATGAAAGGGCAGGCTGTAGCAGACTTCATAGCAGAACTAACACCTGCAGATCCTCAACTATGTAACATCGACTCACAGTTAGTTGAAGAAGAGCACTCCTGGACACTCTACGTAGATGGGTCCTCAAACTTTAAAGGTTATGGGGCAAGACTTCTACTGGTCTCTCTAGATAATGAGAGATTTGAATATCCACTGCGATTCAGTTTCTATGCATCCAACAACGAAGCCAAGTATGAGACTCTGGTAGCAGGATTAAGGGTGGCCAGGTACATTAGAGTCAGAAACATACTGATACTCAGTGATTCGCAACTGATTATAAGTTAGAAATATTAGGCTAGAGAGTCACAAATAGCGAAACCTTTCTCAGGTAAAAGACCAGCTCGGCCACTTCTCAAAATATGAGATTCGACAAATTCTTCGTACTCAAAACATCAACGCAAACGCGTTGGCTCGACTAGCTACAGCTTATGAAACCGACTTGGGAAGAACTATGCCAGTCGATATTTTGCCTAAGCCGAGCTTAGAAACTCGGAAGCAATGGATATCGACGAACAAGGATAACCAGAAGAAAACTGGATGA

mRNA sequence

ATGAGTCGGCACCCAACCTATAAGCTTGAGGTCGCCCACATGAAAGCACGAATGGAGGTTGTGATGGAGGCGCTGCAAGGTTTTGACGTTCATCGGCCATCCAAGTTCGAGCTTCACGGAATTGATCATTTTGTGATCACAGAACTAGAATTCGCCAATTATAAGGAGACATCATATCGAGAAGATGATCAGAGAGGGAATCTATCAGAGCCAGTTGATGGGGAGTGGAGCGAGGGAACACCGGTGGGCAACGCAGTGGGTTGCAAGTGGGGTGGGGTTACCCTAGCTTCTGCAGCAACCAAAAGCGGTAGTGAAAGAGTAGAACTCAAATCCCAAGAAAAGCCAGGAATTGCACCTGGTGCATTTTCCCAGCATAGTGTGTTTTCCATGTTTTGCATCAAAACTAAGGTCTTTGAGTCCCTAATAATCAAGCTTGGTGCGAACCTCGAGAGGAACCGGGAGAGCATAATCCACGCATCAACAATTGGCACCGTCTGTGGGGATGATACAGTCCGAGCAAGCTTGGCCGAGACGAAGCCCAGATCCGAGGGAGGTAGAATGGAGCGAATCGACGCGAGCCCTGGTGGAGGCAGATTCGAGGCCGGTAGAATGGAGCAAATCGACGCGAGCCCTAATGGAGGTAGATCCAAGGAGGGTAGAATGGAGCGAATCGACATGAATCCTAGTGGAGGCCAGCAATGTTTCGAAAAGAAGAGCCTGAACAAGGCTGCCGACCACTCGGGGGAAGTAAGTCTGAGCCCTAGTCATCAACTAAATCCGACCACCCCCGATAGGGGAGAACCGGCTGAGGAGGTAGAATCTCTCCCTCTGACAGCCAAGGATCGTTCGAGTAAACATCGGAAACAGGTAAAAGACCAGCTCGGCCACTTCTCAAAATATGAGATTCGACAAATTCTTCGTACTCAAAACATCAACGCAAACGCGTTGGCTCGACTAGCTACAGCTTATGAAACCGACTTGGGAAGAACTATGCCAGTCGATATTTTGCCTAAGCCGAGCTTAGAAACTCGGAAGCAATGGATATCGACGAACAAGGATAACCAGAAGAAAACTGGATGA

Coding sequence (CDS)

ATGAGTCGGCACCCAACCTATAAGCTTGAGGTCGCCCACATGAAAGCACGAATGGAGGTTGTGATGGAGGCGCTGCAAGGTTTTGACGTTCATCGGCCATCCAAGTTCGAGCTTCACGGAATTGATCATTTTGTGATCACAGAACTAGAATTCGCCAATTATAAGGAGACATCATATCGAGAAGATGATCAGAGAGGGAATCTATCAGAGCCAGTTGATGGGGAGTGGAGCGAGGGAACACCGGTGGGCAACGCAGTGGGTTGCAAGTGGGGTGGGGTTACCCTAGCTTCTGCAGCAACCAAAAGCGGTAGTGAAAGAGTAGAACTCAAATCCCAAGAAAAGCCAGGAATTGCACCTGGTGCATTTTCCCAGCATAGTGTGTTTTCCATGTTTTGCATCAAAACTAAGGTCTTTGAGTCCCTAATAATCAAGCTTGGTGCGAACCTCGAGAGGAACCGGGAGAGCATAATCCACGCATCAACAATTGGCACCGTCTGTGGGGATGATACAGTCCGAGCAAGCTTGGCCGAGACGAAGCCCAGATCCGAGGGAGGTAGAATGGAGCGAATCGACGCGAGCCCTGGTGGAGGCAGATTCGAGGCCGGTAGAATGGAGCAAATCGACGCGAGCCCTAATGGAGGTAGATCCAAGGAGGGTAGAATGGAGCGAATCGACATGAATCCTAGTGGAGGCCAGCAATGTTTCGAAAAGAAGAGCCTGAACAAGGCTGCCGACCACTCGGGGGAAGTAAGTCTGAGCCCTAGTCATCAACTAAATCCGACCACCCCCGATAGGGGAGAACCGGCTGAGGAGGTAGAATCTCTCCCTCTGACAGCCAAGGATCGTTCGAGTAAACATCGGAAACAGGTAAAAGACCAGCTCGGCCACTTCTCAAAATATGAGATTCGACAAATTCTTCGTACTCAAAACATCAACGCAAACGCGTTGGCTCGACTAGCTACAGCTTATGAAACCGACTTGGGAAGAACTATGCCAGTCGATATTTTGCCTAAGCCGAGCTTAGAAACTCGGAAGCAATGGATATCGACGAACAAGGATAACCAGAAGAAAACTGGATGA

Protein sequence

MSRHPTYKLEVAHMKARMEVVMEALQGFDVHRPSKFELHGIDHFVITELEFANYKETSYREDDQRGNLSEPVDGEWSEGTPVGNAVGCKWGGVTLASAATKSGSERVELKSQEKPGIAPGAFSQHSVFSMFCIKTKVFESLIIKLGANLERNRESIIHASTIGTVCGDDTVRASLAETKPRSEGGRMERIDASPGGGRFEAGRMEQIDASPNGGRSKEGRMERIDMNPSGGQQCFEKKSLNKAADHSGEVSLSPSHQLNPTTPDRGEPAEEVESLPLTAKDRSSKHRKQVKDQLGHFSKYEIRQILRTQNINANALARLATAYETDLGRTMPVDILPKPSLETRKQWISTNKDNQKKTG

Homology

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BLAST of Moc09g13970 vs. NCBI nr
Match: XP_022158579.1 (uncharacterized protein LOC111025033 [Momordica charantia])

HSP 1 Score: 83.6 bits (205), Expect = 3.9e-12
Identity = 44/74 (59.46%), Postives = 57/74 (77.03%), Query Frame = 0


Query: 282 RSSKHRKQVKDQLGHFSKYEIRQILRTQNINANALARLATAYETDLGRTMPVDILPKPSL 341
           R +K+  QV++QL  FSKYEIRQI   QN+NA+ LARLA AYETDLGRT+PV+ILP PS+
Sbjct: 400 RMAKYLSQVRNQLDQFSKYEIRQIPHAQNVNADVLARLAVAYETDLGRTVPVEILPGPSI 459

Query: 342 ETRKQWISTNKDNQ 356
           E ++   + + DNQ
Sbjct: 460 EAQE---AMDIDNQ 470

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BLAST of Moc09g13970 vs. NCBI nr
Match: XP_022154103.1 (uncharacterized protein LOC111021439 [Momordica charantia])

HSP 1 Score: 83.2 bits (204), Expect = 5.1e-12
Identity = 45/80 (56.25%), Postives = 60/80 (75.00%), Query Frame = 0


Query: 266 GEPAEEVESLPLTAKDRSSKHRKQVKDQLGHFSKYEIRQILRTQNINANALARLATAYET 325
           G+  EE ++     + R +K+  QV++QL  FSKYEIRQI R QN+NA+ALARLAT YET
Sbjct: 181 GQVKEEFQA----RESRMTKYLSQVRNQLDQFSKYEIRQIPRAQNVNADALARLATTYET 240

Query: 326 DLGRTMPVDILPKPSLETRK 346
           DLGRT+PV+IL  PS+E ++
Sbjct: 241 DLGRTVPVEILLGPSIEAQE 256

[Close]

BLAST of Moc09g13970 vs. NCBI nr
Match: XP_022156571.1 (uncharacterized protein LOC111023448 [Momordica charantia])

HSP 1 Score: 82.0 bits (201), Expect = 1.1e-11
Identity = 46/90 (51.11%), Postives = 65/90 (72.22%), Query Frame = 0


Query: 266 GEPAEEVESLPLTAKDRSSKHRKQVKDQLGHFSKYEIRQILRTQNINANALARLATAYET 325
           G+  EE ++     + R +K+  QV++QL  FSKYEI QI R QN++A+ALARLA  YET
Sbjct: 725 GQVKEEFQA----REPRMAKYLSQVRNQLDQFSKYEIXQIPRAQNVBADALARLAAXYET 784

Query: 326 DLGRTMPVDILPKPSLETRKQWISTNKDNQ 356
           DLGRT+PV+ILP+PS+E ++   + + DNQ
Sbjct: 785 DLGRTVPVEILPEPSIEAQE---AMDIDNQ 807

[Close]

BLAST of Moc09g13970 vs. NCBI nr
Match: XP_022156571.1 (uncharacterized protein LOC111023448 [Momordica charantia])

HSP 1 Score: 57.4 bits (137), Expect = 3.0e-04
Identity = 37/83 (44.58%), Postives = 49/83 (59.04%), Query Frame = 0


Query: 226 MNPSGGQQCFEKKSLNKAADHSGEVSLSPSHQLNPTTPDRGEPAEEVESLPLTAKDRSSK 285
           +NP+   +      L KA D SG+   SP H+LN TT DRGEPAEEVES+PLTA+DR   
Sbjct: 65  LNPTTLDKGGPVAGLIKATDLSGDARPSPGHRLNSTTLDRGEPAEEVESVPLTAEDR--- 124

Query: 286 HRKQVKDQLGHFSKYEIRQILRT 309
            R  +  +LG   +  +   LR+
Sbjct: 125 -RVNIGTKLGSEERESLINFLRS 143

HSP 2 Score: 79.3 bits (194), Expect = 7.3e-11
Identity = 40/65 (61.54%), Postives = 54/65 (83.08%), Query Frame = 0


Query: 282 RSSKHRKQVKDQLGHFSKYEIRQILRTQNINANALARLATAYETDLGRTMPVDILPKPSL 341
           R +K+  +VKDQLG FSK+EIRQI  TQN+NA+ALARLA AY TDLGRT+ V+IL +PS+
Sbjct: 340 RMAKYLSRVKDQLGQFSKFEIRQIPCTQNVNADALARLAAAYGTDLGRTISVEILLEPSI 399

Query: 342 ETRKQ 347
           + +++
Sbjct: 400 KAQEK 404

[Close]

BLAST of Moc09g13970 vs. NCBI nr
Match: XP_022131678.1 (uncharacterized protein LOC111004795 [Momordica charantia])

HSP 1 Score: 75.5 bits (184), Expect = 1.1e-09
Identity = 37/56 (66.07%), Postives = 46/56 (82.14%), Query Frame = 0


Query: 289 QVKDQLGHFSKYEIRQILRTQNINANALARLATAYETDLGRTMPVDILPKPSLETR 345
           +VKDQL  FSKYE  QI R+QN+NANALARLA   ET LGRT+PV+ILP+PS++ +
Sbjct: 6   RVKDQLSLFSKYEFMQIPRSQNVNANALARLAATCETGLGRTVPVEILPEPSIKVQ 61

[Close]

BLAST of Moc09g13970 vs. ExPASy TrEMBL
Match: A0A6J1DZU0 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025033 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-12
Identity = 44/74 (59.46%), Postives = 57/74 (77.03%), Query Frame = 0


Query: 282 RSSKHRKQVKDQLGHFSKYEIRQILRTQNINANALARLATAYETDLGRTMPVDILPKPSL 341
           R +K+  QV++QL  FSKYEIRQI   QN+NA+ LARLA AYETDLGRT+PV+ILP PS+
Sbjct: 400 RMAKYLSQVRNQLDQFSKYEIRQIPHAQNVNADVLARLAVAYETDLGRTVPVEILPGPSI 459

Query: 342 ETRKQWISTNKDNQ 356
           E ++   + + DNQ
Sbjct: 460 EAQE---AMDIDNQ 470

[Close]

BLAST of Moc09g13970 vs. ExPASy TrEMBL
Match: A0A6J1DJC7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111021439 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.5e-12
Identity = 45/80 (56.25%), Postives = 60/80 (75.00%), Query Frame = 0


Query: 266 GEPAEEVESLPLTAKDRSSKHRKQVKDQLGHFSKYEIRQILRTQNINANALARLATAYET 325
           G+  EE ++     + R +K+  QV++QL  FSKYEIRQI R QN+NA+ALARLAT YET
Sbjct: 181 GQVKEEFQA----RESRMTKYLSQVRNQLDQFSKYEIRQIPRAQNVNADALARLATTYET 240

Query: 326 DLGRTMPVDILPKPSLETRK 346
           DLGRT+PV+IL  PS+E ++
Sbjct: 241 DLGRTVPVEILLGPSIEAQE 256

[Close]

BLAST of Moc09g13970 vs. ExPASy TrEMBL
Match: A0A6J1DVC6 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111023448 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-11
Identity = 46/90 (51.11%), Postives = 65/90 (72.22%), Query Frame = 0


Query: 266 GEPAEEVESLPLTAKDRSSKHRKQVKDQLGHFSKYEIRQILRTQNINANALARLATAYET 325
           G+  EE ++     + R +K+  QV++QL  FSKYEI QI R QN++A+ALARLA  YET
Sbjct: 725 GQVKEEFQA----REPRMAKYLSQVRNQLDQFSKYEIXQIPRAQNVDADALARLAAXYET 784

Query: 326 DLGRTMPVDILPKPSLETRKQWISTNKDNQ 356
           DLGRT+PV+ILP+PS+E ++   + + DNQ
Sbjct: 785 DLGRTVPVEILPEPSIEAQE---AMDIDNQ 807

[Close]

BLAST of Moc09g13970 vs. ExPASy TrEMBL
Match: A0A6J1DVC6 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111023448 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.4e-04
Identity = 37/83 (44.58%), Postives = 49/83 (59.04%), Query Frame = 0


Query: 226 MNPSGGQQCFEKKSLNKAADHSGEVSLSPSHQLNPTTPDRGEPAEEVESLPLTAKDRSSK 285
           +NP+   +      L KA D SG+   SP H+LN TT DRGEPAEEVES+PLTA+DR   
Sbjct: 65  LNPTTLDKGGPVAGLIKATDLSGDARPSPGHRLNSTTLDRGEPAEEVESVPLTAEDR--- 124

Query: 286 HRKQVKDQLGHFSKYEIRQILRT 309
            R  +  +LG   +  +   LR+
Sbjct: 125 -RVNIGTKLGSEERESLINFLRS 143

HSP 2 Score: 79.3 bits (194), Expect = 3.5e-11
Identity = 40/65 (61.54%), Postives = 54/65 (83.08%), Query Frame = 0


Query: 282 RSSKHRKQVKDQLGHFSKYEIRQILRTQNINANALARLATAYETDLGRTMPVDILPKPSL 341
           R +K+  +VKDQLG FSK+EIRQI  TQN+NA+ALARLA AY TDLGRT+ V+IL +PS+
Sbjct: 340 RMAKYLSRVKDQLGQFSKFEIRQIPCTQNVNADALARLAAAYGTDLGRTISVEILLEPSI 399

Query: 342 ETRKQ 347
           + +++
Sbjct: 400 KAQEK 404

[Close]

BLAST of Moc09g13970 vs. ExPASy TrEMBL
Match: A0A6J1BU48 (uncharacterized protein LOC111004795 OS=Momordica charantia OX=3673 GN=LOC111004795 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 5.1e-10
Identity = 37/56 (66.07%), Postives = 46/56 (82.14%), Query Frame = 0


Query: 289 QVKDQLGHFSKYEIRQILRTQNINANALARLATAYETDLGRTMPVDILPKPSLETR 345
           +VKDQL  FSKYE  QI R+QN+NANALARLA   ET LGRT+PV+ILP+PS++ +
Sbjct: 6   RVKDQLSLFSKYEFMQIPRSQNVNANALARLAATCETGLGRTVPVEILPEPSIKVQ 61

The following BLAST results are available for this feature:

BLAST of Moc09g13970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158579.1	3.9e-12	59.46	uncharacterized protein LOC111025033 [Momordica charantia]	[more]
XP_022154103.1	5.1e-12	56.25	uncharacterized protein LOC111021439 [Momordica charantia]	[more]
XP_022156571.1	1.1e-11	51.11	uncharacterized protein LOC111023448 [Momordica charantia]	[more]
XP_022156571.1	3.0e-04	44.58	uncharacterized protein LOC111023448 [Momordica charantia]	[more]
XP_022131678.1	1.1e-09	66.07	uncharacterized protein LOC111004795 [Momordica charantia]	[more]

BLAST of Moc09g13970 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc09g13970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZU0	1.9e-12	59.46	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025033 PE=4 SV=1	[more]
A0A6J1DJC7	2.5e-12	56.25	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111021439 PE=4 SV=1	[more]
A0A6J1DVC6	1.2e-11	51.11	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111023448 PE=4 SV=1	[more]
A0A6J1DVC6	1.4e-04	44.58	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111023448 PE=4 SV=1	[more]
A0A6J1BU48	5.1e-10	66.07	uncharacterized protein LOC111004795 OS=Momordica charantia OX=3673 GN=LOC111004...	[more]

BLAST of Moc09g13970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..292
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 246..262
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 266..292

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g13970.1	Moc09g13970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0016020	membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity