Moc09g13610 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g13610
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	LOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Location	chr9: 11596443 .. 11596940 (-)
RNA-Seq Expression	Moc09g13610
Synteny	Moc09g13610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCAATTCAAAAAGCTTGAGAATGTTTTAAAGAATTACTTAGGAGATGTCCAAGCCATGGATTGCCTGCATGCGTACAAATTGAGCAATTTTTTAGAGGATTGTATCATCCTTCTATATGATGTTGAAACCGCAGACAATGGTTCGTTGTTACAGAAGTTAGTTAATGAGATTGTAGATATTTTGAACAAGATGACGAGCATTAATAATCAAGGAGAATTAGAAAGATCATTGCCAAAGAAGCAAGCATCAGCAGGAATTTTTGAGTTAGACACAACATCTTCAATGCAGGCTCAAATGGTAGCCATGAATCAGATGCTGAAGGCATTGAGAATGGAGAAGGCCAACAAAGCACCTACTTCTGCGGCGATTCTTGAAGCTTCTCCTATTTTGAAAATTTCCGATATATCTTGTGTTTATTGTGGTGCTAACTACTTATATGAAAACTATCCAGTTAATACAGTGTTTGTTTATTATGTAGGTCAAGGTGTCTAG

mRNA sequence

ATGAAGCAATTCAAAAAGCTTGAGAATGTTTTAAAGAATTACTTAGGAGATGTCCAAGCCATGGATTGCCTGCATGCGTACAAATTGAGCAATTTTTTAGAGGATTGTATCATCCTTCTATATGATGTTGAAACCGCAGACAATGGTTCGTTGTTACAGAAGTTAGTTAATGAGATTGTAGATATTTTGAACAAGATGACGAGCATTAATAATCAAGGAGAATTAGAAAGATCATTGCCAAAGAAGCAAGCATCAGCAGGAATTTTTGAGTTAGACACAACATCTTCAATGCAGGCTCAAATGGTAGCCATGAATCAGATGCTGAAGGCATTGAGAATGGAGAAGGCCAACAAAGCACCTACTTCTGCGGCGATTCTTGAAGCTTCTCCTATTTTGAAAATTTCCGATATATCTTGTGTTTATTGTGGTGCTAACTACTTATATGAAAACTATCCAGTTAATACAGTGTTTGTTTATTATGTAGGTCAAGGTGTCTAG

Coding sequence (CDS)

ATGAAGCAATTCAAAAAGCTTGAGAATGTTTTAAAGAATTACTTAGGAGATGTCCAAGCCATGGATTGCCTGCATGCGTACAAATTGAGCAATTTTTTAGAGGATTGTATCATCCTTCTATATGATGTTGAAACCGCAGACAATGGTTCGTTGTTACAGAAGTTAGTTAATGAGATTGTAGATATTTTGAACAAGATGACGAGCATTAATAATCAAGGAGAATTAGAAAGATCATTGCCAAAGAAGCAAGCATCAGCAGGAATTTTTGAGTTAGACACAACATCTTCAATGCAGGCTCAAATGGTAGCCATGAATCAGATGCTGAAGGCATTGAGAATGGAGAAGGCCAACAAAGCACCTACTTCTGCGGCGATTCTTGAAGCTTCTCCTATTTTGAAAATTTCCGATATATCTTGTGTTTATTGTGGTGCTAACTACTTATATGAAAACTATCCAGTTAATACAGTGTTTGTTTATTATGTAGGTCAAGGTGTCTAG

Protein sequence

MKQFKKLENVLKNYLGDVQAMDCLHAYKLSNFLEDCIILLYDVETADNGSLLQKLVNEIVDILNKMTSINNQGELERSLPKKQASAGIFELDTTSSMQAQMVAMNQMLKALRMEKANKAPTSAAILEASPILKISDISCVYCGANYLYENYPVNTVFVYYVGQGV

Homology

[Close]

BLAST of Moc09g13610 vs. NCBI nr
Match: XP_022159127.1 (uncharacterized protein LOC111025557 [Momordica charantia])

HSP 1 Score: 155.6 bits (392), Expect = 3.7e-34
Identity = 85/121 (70.25%), Postives = 97/121 (80.17%), Query Frame = 0


Query: 45  TADNGSLLQKLVNEIVDILNKMTSINNQGELERSLPKKQASAGIFELDTTSSMQAQMVAM 104
           TA N SLL+K VNEI+DILNKM  IN+Q EL RSLPKKQASAGIFELDT +S+QAQ+ AM
Sbjct: 141 TAANCSLLEKSVNEIIDILNKMIDINDQIELGRSLPKKQASAGIFELDTVTSLQAQISAM 200

Query: 105 NQMLKALRMEKANKAPTSAAILEASPILKISDISCVYCGANYLYENYPVNTVFVYYVGQG 164
           +QMLK L M+KANK  TS  ILE S IL+ISDISCVYC  N+LYEN   N  F++YVGQG
Sbjct: 201 SQMLKQLTMKKANKPATSVIILEPSSILQISDISCVYCVDNHLYENCHANPAFIFYVGQG 260

Query: 165 V 166
           V
Sbjct: 261 V 261

[Close]

BLAST of Moc09g13610 vs. NCBI nr
Match: XP_022158314.1 (uncharacterized protein LOC111024824 [Momordica charantia])

HSP 1 Score: 143.7 bits (361), Expect = 1.5e-30
Identity = 78/121 (64.46%), Postives = 91/121 (75.21%), Query Frame = 0


Query: 43  VETADNGSLLQKLVNEIVDILNKMTSINNQGELERSLPKKQASAGIFELDTTSSMQAQMV 102
           + TA N SL +K ++EI+DILNKMT  N+QGE+ RSLPKKQ SA +FELDT +SMQAQM 
Sbjct: 162 LNTAANDSLFEKSISEIIDILNKMTDSNDQGEIGRSLPKKQVSARVFELDTVASMQAQMA 221

Query: 103 AMNQMLKALRMEKANKAPTSAAILEASPILKISDISCVYCGANYLYENYPVNTVFVYYVG 162
            +NQMLK L MEK  K  TS A+LE S  L+ISDISCVYCG N LYEN P N   V+YVG
Sbjct: 222 TINQMLKQLTMEKETKTATS-AMLEPSLCLQISDISCVYCGDNQLYENCPANPTSVFYVG 281

Query: 163 Q 164
           Q
Sbjct: 282 Q 281

[Close]

BLAST of Moc09g13610 vs. NCBI nr
Match: XP_022158836.1 (uncharacterized protein LOC111025302 [Momordica charantia])

HSP 1 Score: 136.3 bits (342), Expect = 2.3e-28
Identity = 75/101 (74.26%), Postives = 82/101 (81.19%), Query Frame = 0


Query: 43  VETADNGSLLQKLVNEIVDILNKMTSINNQGELERSLPKKQASAGIFELDTTSSMQAQMV 102
           + T  NGSLL+K VNEIVD+LNKMT IN+QGE+ RSLPKKQ S GIFELDT +SMQAQM 
Sbjct: 222 LNTLANGSLLEKSVNEIVDVLNKMTDINDQGEMGRSLPKKQVSTGIFELDTVASMQAQMA 281

Query: 103 AMNQMLKALRMEKANKAPTSAAILEASPILKISDISCVYCG 144
           AMNQMLK L MEK  K  TS AI E SPIL+ISDISCVYCG
Sbjct: 282 AMNQMLKQLTMEKETKTVTS-AIPEHSPILQISDISCVYCG 321

[Close]

BLAST of Moc09g13610 vs. NCBI nr
Match: XP_022154847.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia])

HSP 1 Score: 102.1 bits (253), Expect = 4.8e-18
Identity = 58/83 (69.88%), Postives = 62/83 (74.70%), Query Frame = 0


Query: 43  VETADNGSLLQKLVNEIVDILNKMTSINNQGELERSLPKKQASAGIFELDTTSSMQAQMV 102
           + TA NGSLL+K VNEIVDILNKM  IN+QGE  RSL KKQ SAGIFELDT + MQAQM 
Sbjct: 133 LNTAANGSLLEKSVNEIVDILNKMIDINDQGERGRSLSKKQVSAGIFELDTVALMQAQMA 192

Query: 103 AMNQMLKALRMEKANKAPTSAAI 126
           AMNQMLK   MEK  K  TS  I
Sbjct: 193 AMNQMLKQFTMEKETKTVTSLHI 215

[Close]

BLAST of Moc09g13610 vs. NCBI nr
Match: XP_022150317.1 (uncharacterized protein LOC111018514 [Momordica charantia])

HSP 1 Score: 92.0 bits (227), Expect = 5.0e-15
Identity = 54/124 (43.55%), Postives = 71/124 (57.26%), Query Frame = 0


Query: 43  VETADNGSLLQKLVNEIVDILNKMTSINNQGELERS--LPKKQASAGIFELDTTSSMQAQ 102
           +  A NG+  +K  NEIVDIL  + S N     +RS   PKKQ  AG+  LD  +SMQ +
Sbjct: 37  LNNAANGAFTKKTFNEIVDILEDLASHNELWCSQRSKPAPKKQDQAGVLALDIATSMQKE 96

Query: 103 MVAMNQMLKALRMEKANKAPTSAAILEASPILKISDISCVYCGANYLYENYPVNTVFVYY 162
           M  MNQMLK L +E+ +          ASP+ +I++I C YC  N++YEN P N    YY
Sbjct: 97  MXTMNQMLKELALERKSAPXXPXQPEYASPVCQINEIVCSYCSDNHVYENCPHNPASXYY 156

Query: 163 VGQG 165
           VG G
Sbjct: 157 VGHG 160

[Close]

BLAST of Moc09g13610 vs. ExPASy TrEMBL
Match: A0A6J1DYY9 (uncharacterized protein LOC111025557 OS=Momordica charantia OX=3673 GN=LOC111025557 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.8e-34
Identity = 85/121 (70.25%), Postives = 97/121 (80.17%), Query Frame = 0


Query: 45  TADNGSLLQKLVNEIVDILNKMTSINNQGELERSLPKKQASAGIFELDTTSSMQAQMVAM 104
           TA N SLL+K VNEI+DILNKM  IN+Q EL RSLPKKQASAGIFELDT +S+QAQ+ AM
Sbjct: 141 TAANCSLLEKSVNEIIDILNKMIDINDQIELGRSLPKKQASAGIFELDTVTSLQAQISAM 200

Query: 105 NQMLKALRMEKANKAPTSAAILEASPILKISDISCVYCGANYLYENYPVNTVFVYYVGQG 164
           +QMLK L M+KANK  TS  ILE S IL+ISDISCVYC  N+LYEN   N  F++YVGQG
Sbjct: 201 SQMLKQLTMKKANKPATSVIILEPSSILQISDISCVYCVDNHLYENCHANPAFIFYVGQG 260

Query: 165 V 166
           V
Sbjct: 261 V 261

[Close]

BLAST of Moc09g13610 vs. ExPASy TrEMBL
Match: A0A6J1DZ19 (uncharacterized protein LOC111024824 OS=Momordica charantia OX=3673 GN=LOC111024824 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 7.0e-31
Identity = 78/121 (64.46%), Postives = 91/121 (75.21%), Query Frame = 0


Query: 43  VETADNGSLLQKLVNEIVDILNKMTSINNQGELERSLPKKQASAGIFELDTTSSMQAQMV 102
           + TA N SL +K ++EI+DILNKMT  N+QGE+ RSLPKKQ SA +FELDT +SMQAQM 
Sbjct: 162 LNTAANDSLFEKSISEIIDILNKMTDSNDQGEIGRSLPKKQVSARVFELDTVASMQAQMA 221

Query: 103 AMNQMLKALRMEKANKAPTSAAILEASPILKISDISCVYCGANYLYENYPVNTVFVYYVG 162
            +NQMLK L MEK  K  TS A+LE S  L+ISDISCVYCG N LYEN P N   V+YVG
Sbjct: 222 TINQMLKQLTMEKETKTATS-AMLEPSLCLQISDISCVYCGDNQLYENCPANPTSVFYVG 281

Query: 163 Q 164
           Q
Sbjct: 282 Q 281

[Close]

BLAST of Moc09g13610 vs. ExPASy TrEMBL
Match: A0A6J1E251 (uncharacterized protein LOC111025302 OS=Momordica charantia OX=3673 GN=LOC111025302 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.1e-28
Identity = 75/101 (74.26%), Postives = 82/101 (81.19%), Query Frame = 0


Query: 43  VETADNGSLLQKLVNEIVDILNKMTSINNQGELERSLPKKQASAGIFELDTTSSMQAQMV 102
           + T  NGSLL+K VNEIVD+LNKMT IN+QGE+ RSLPKKQ S GIFELDT +SMQAQM 
Sbjct: 222 LNTLANGSLLEKSVNEIVDVLNKMTDINDQGEMGRSLPKKQVSTGIFELDTVASMQAQMA 281

Query: 103 AMNQMLKALRMEKANKAPTSAAILEASPILKISDISCVYCG 144
           AMNQMLK L MEK  K  TS AI E SPIL+ISDISCVYCG
Sbjct: 282 AMNQMLKQLTMEKETKTVTS-AIPEHSPILQISDISCVYCG 321

[Close]

BLAST of Moc09g13610 vs. ExPASy TrEMBL
Match: A0A6J1DMT3 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 OS=Momordica charantia OX=3673 GN=LOC111022007 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 2.3e-18
Identity = 58/83 (69.88%), Postives = 62/83 (74.70%), Query Frame = 0


Query: 43  VETADNGSLLQKLVNEIVDILNKMTSINNQGELERSLPKKQASAGIFELDTTSSMQAQMV 102
           + TA NGSLL+K VNEIVDILNKM  IN+QGE  RSL KKQ SAGIFELDT + MQAQM 
Sbjct: 133 LNTAANGSLLEKSVNEIVDILNKMIDINDQGERGRSLSKKQVSAGIFELDTVALMQAQMA 192

Query: 103 AMNQMLKALRMEKANKAPTSAAI 126
           AMNQMLK   MEK  K  TS  I
Sbjct: 193 AMNQMLKQFTMEKETKTVTSLHI 215

[Close]

BLAST of Moc09g13610 vs. ExPASy TrEMBL
Match: A0A6J1DAE9 (uncharacterized protein LOC111018514 OS=Momordica charantia OX=3673 GN=LOC111018514 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 2.4e-15
Identity = 54/124 (43.55%), Postives = 71/124 (57.26%), Query Frame = 0


Query: 43  VETADNGSLLQKLVNEIVDILNKMTSINNQGELERS--LPKKQASAGIFELDTTSSMQAQ 102
           +  A NG+  +K  NEIVDIL  + S N     +RS   PKKQ  AG+  LD  +SMQ +
Sbjct: 37  LNNAANGAFTKKTFNEIVDILEDLASHNELWCSQRSKPAPKKQDQAGVLALDIATSMQKE 96

Query: 103 MVAMNQMLKALRMEKANKAPTSAAILEASPILKISDISCVYCGANYLYENYPVNTVFVYY 162
           M  MNQMLK L +E+ +          ASP+ +I++I C YC  N++YEN P N    YY
Sbjct: 97  MXTMNQMLKELALERKSAPXXPXQPEYASPVCQINEIVCSYCSDNHVYENCPHNPASXYY 156

Query: 163 VGQG 165
           VG G
Sbjct: 157 VGHG 160

The following BLAST results are available for this feature:

BLAST of Moc09g13610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159127.1	3.7e-34	70.25	uncharacterized protein LOC111025557 [Momordica charantia]	[more]
XP_022158314.1	1.5e-30	64.46	uncharacterized protein LOC111024824 [Momordica charantia]	[more]
XP_022158836.1	2.3e-28	74.26	uncharacterized protein LOC111025302 [Momordica charantia]	[more]
XP_022154847.1	4.8e-18	69.88	LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]	[more]
XP_022150317.1	5.0e-15	43.55	uncharacterized protein LOC111018514 [Momordica charantia]	[more]

BLAST of Moc09g13610 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc09g13610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DYY9	1.8e-34	70.25	uncharacterized protein LOC111025557 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DZ19	7.0e-31	64.46	uncharacterized protein LOC111024824 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1E251	1.1e-28	74.26	uncharacterized protein LOC111025302 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DMT3	2.3e-18	69.88	LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 OS=Momordica charantia...	[more]
A0A6J1DAE9	2.4e-15	43.55	uncharacterized protein LOC111018514 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of Moc09g13610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 52..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g13610.1	Moc09g13610.1	mRNA