Moc09g12490 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc09g12490
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Locationchr9: 10683751 .. 10687520 (+)
RNA-Seq ExpressionMoc09g12490
SyntenyMoc09g12490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAGAGCAAACGCAATCATTGGAAATTTCTAGCCATGAAGTGACTATGATAGACTTTATGGCAAGAAATGATGAAGTAATACGCAGGCTGCAGATCCAAATGGAGCAGACGGTCGATGAGTTGAGGAATAGTCCAATAGAAGCATTGCCTGACAATGAGCAAGGTGAGACAATCAATGTATCGAGCGAGCTTGAATATGGCGAACCTAAGCTCCTAGTAGACAATGATGATCCACCAACCCCTGAAGTGATAAACAAGGTATGGAAGAATAAGGAAATTGAACCCGAGAAACCGGTAGAGGTAATGGCGCATAAGTTTGCAATAGTCATAAACTCATCACCTCTAAATATTGGACCGCTTTTCTCTTTCTCTTGATGCTCTTTAGAGATAACCCAAGACATAAAGAAGGAAGAGTTGACCAAACCTGTCAAGGATCAAGTAGAGGAAGAAATAGGAGAATATGAGATAGATTCAGATGAAGGGTTCTTCGTTAAAGTTTCACCCCAAAGTCCAATTTTCAAAAACCAATGCGTACAAGTAAGCCGCCTCCCCCTTGAGCTAGACCTTAAAGCATATTGTGTTCTGAATGAGCGAAACTACGACATGGCAGTAGCAGAAGAGAGGTCGAATGAGTTTGAGAAAATGCGTGAAAGTTTGAGAAACTGTGTACATTGTCCCTCAAATAAAGAGGAATTTAATTTTTGTTGCTTGCTTACTTGAACAATCTATGTCAATCTCTTTTCTTTCTAATGAAGCATTTATTATAAGAAAATGTATTGAAATTTGTTAAGCAAAATTAGAAAATAACTTGTACGTACTAAGACCAACTTTAACTAAAACAATTCTAAACACTTAATTGTTTAAAACTGCAACAACACAGTCCAAAAGACAAATAATTTCTCCTAAAGAAAATGCCCATCTTTGGCACCTCAGACTTGGCCACATTAATCTCAACAGGATTGGGAAACTGGTTAAGAGCGGTCTCCTAAGTGAGTTAGATGACAACTCTTTACCAGTATGTGAATCATGCCTTAAGGGTAAAATGACTAAAAGACCCTTTATAGCAAAGGGTTATAGAGCCAAAGAACACTTAGAACTTGTACATTCAGATCTTTGTGGTCCAATGAATGTTCGAACTCGAGGTGGGTATAAATATTTCATCTCTTTCGTAGATGATTATTCAAGATGTAGGTATCGTTACCTAATACAACATAAGTCTGAAGCTCTTGAAAAGTTCAAAGAGTATAATATTGAAATTGAAAATTCATTAGATAAGTCCATTAAAAAACTTCGATCAGATCGTGGTGGTGAGTACATGGACTTGAGATTTCAAGACTATATGATAGAACACGGAATCGCTTCTCAACTCTCAGAGTCCAGTACACCGCAACAAAATGGTGTGTCAGGAAGGAGAAACAGAACCTTGTTAGACATGGTTCGGTCAACGATGAGTTGTGCTCAATTGCCTGATTTTTTTTTTTTTTTGAGGTTATGCAGTGGAGACTGCAGTTTATATCCTGAACAATGTTCCATCAAAGAATGTTTCTAAGATACCGTTTAAAACACTTCAGAGTTTGGGGTTGTCCAGCACATGTGCTTGTGACGAACCCAAAGAAATTGGAACCACGTTCAAAGGTATGTCTATTTGTAGGTTATCCCAAAGTAACGAGAGATGGTTACTTTTTCGATCCTAAGGAAAATAAAGTATTTGTATCGACAAATGCTACTTTCCTAGAAGAAAACCATGTAAGAGATCATAAACCACGTAGTAAAATGGTGTTTAATGAAATTTCCAATGAAGATATCAGTACAACAGCAAGAGTTCTTGATACTACTGGACCATCAACAAGGATTCTTGACGGAGCCAGTACATCGAGCCAACATCAAACTTCACAATTTGAGAGGGCATCGACGTAGTGGGAGGGTTGTAACTCAGCCTGACCGTTACGTGAGATTAACAGAATCTCAGGTCGTCATACCTGATGATAGCGTTAAGGATTCGTTGTCTTATAAACAGGCAATGGAGTCTATGTACTCCAATTCTGTCTGGGAGCTTGTGGATCAACCTAATGGGGTAAAACCTGTAGGTTGCAAATGGATCTACAAGCAAAAGAGTGTCAATTGAAAGGTTCAGACCTTTAAAGCTACACTTGTGGCAAAGGGTTACACCTAGCAGGAGGGAGTTGATTATGAAGAAACTTTTTCCCATGTTGTCATGTTGAAGTCTATCCTTATTTTCTTAGTCATTGCTACATATATTATGACTATGAGATATGGCAAACGGACGTCAAGACAGCTTCTTTAAATGACTATCTTGATGATTGTATTTACATGGCTCAACTAGAAGGATTCGTTGGACAGGGTCAAGAGCAAAAAGTTTGCAAGCTTAAGAGATCCATTTATGGATCGAAACAAGCTTTGAGATCCTAGAACGTAAGGTTTGACATTGCGGTCAAATCTTATGGCTTTGACCAAAACGTTGACGAACCTTGTGTTTACAAGAAGGTCGTCAACAGTACTGTAGCTTTCCTAGTTTTATACGTTGATGACATCCTACTCATTCGGAATGATGTAGGTTTTCTCACCGACGTTAAAAACTGGCTGGCAACACAATTCCAAATGAAAGATTTAGGAGAAGCAGAATATTGTCGATTCATTTACAAAGGCTCACACGGCTAAAGTGTTTAAGTGTCATCTAGAGAATCTATGTTTACGAGACATGTGTCATTTAGTCTAGGGCATATGGGAGATGTTATTGGGTATATTGTATGCCCTAGTTCATTGTAATACTTGTACATCCCACTCGCTTTCGGACAAGTAGGAGATTGTTGGGTTTGGTGCCCTTACCTCATGTATTTGTAATTTATGAACAAATTATTTATTCAATAAAGAGTTATCTTATTATATCTTTGCATCACTCGTATTACAATAAACTAAGATCCAAGGTTATTTAATGTAACTGGAACAGTATATATTTGATATACAATATATATTTAATACACAATGTATATTTTTGATATACTGTATATATTCAATATACAAGTGGATAATGTTCCAGTAATAACCTAAATGGTCTATAGTACAAGGATAAGGTTGGGTACCTTATCCTGGTAACACTATGGATACAGCCCACTTTGTAATAGTTACAAACAGCTTTATCCAGGTCGTTCATGTAGAGACATGTGAGTGGAGGTATCCTATATAATGAGTTTGTATAAGGCTGGACAGTGAAATAATTAATCATTGGCTCTAACACCGTTAGTCAATAGATTGTTATCTCATAGGATTACCAGGTAACTGGATCTTAATCCTGAGCGAGTTATGGACTCCTGCCTATAAGGGATCATCGTTTGATTTGTATGGGTGACAGTGTCCCGAGTTGTCGACTCAATAATCCTACCATTTTGGGGACGAGACTGATTGGAGAGCTGGGAACATAACTACGCAAGATGGAATTCACTCCTTCTCGACTTCAGGGAAGTAAATGAGTGTTCTCTTACATGCTGACTCCGAGACTTGAACAAGGGGCCCGCCCTACCCTCTCACTGGCCCAAGAGAGACTTTCAATTATTGGTCGGACCATAATCGGATTGTTCATTAGAGGAGTAGTGGAATTTAAGGAGCAAGATGTAACTCAGGGGTAAAACGGTAATTTGACACAGCTAGAGTTACGAGCACTCGTTAAGGATTTACTTACTGTTAATGGTCATACATCCGTGGACACAAAAATATTCTGCAGTGAAAAGAGTGCAGTTGCGGGTCATTAG

mRNA sequence

ATGCCAGAGCAAACGCAATCATTGGAAATTTCTAGCCATGAAGTGACTATGATAGACTTTATGGCAAGAAATGATGAAGTAATACGCAGGCTGCAGATCCAAATGGAGCAGACGGTCGATGAGTTGAGGAATAGTCCAATAGAAGCATTGCCTGACAATGAGCAAGGTGAGACAATCAATGTATCGAGCGAGCTTGAATATGGCGAACCTAAGCTCCTAGTAGACAATGATGATCCACCAACCCCTGAAGTGATAAACAAGGTATGGAAGAATAAGGAAATTGAACCCGAGAAACCGGTAGAGATAACCCAAGACATAAAGAAGGAAGAGTTGACCAAACCTGTCAAGGATCAAGTAGAGGAAGAAATAGGAGAATATGAGATAGATTCAGATGAAGGGTTCTTCGTTAAAGTTTCACCCCAAAGTCCAATTTTCAAAAACCAATGCGTACAAGTAAGCCGCCTCCCCCTTGAGCTAGACCTTAAAGCATATTGTGTTCTGAATGAGCGAAACTACGACATGGCAGTAGCAGAAGAGAGAGTTTGGGGTTGTCCAGCACATGTGCTTGTGACGAACCCAAAGAAATTGGAACCACGTTCAAAGATATCAGTACAACAGCAAGAGTTCTTGATACTACTGGACCATCAACAAGGATTCTTGACGGAGCCAGTACATCGAGCCAACATCAAACTTCACAATTTGAGAGGGCATCGACGTAGTGGGAGGGTTGTAACTCAGCCTGACCGTTACGTGAGATTAACAGAATCTCAGGTCGTCATACCTGATGATAGCGTTAAGGATTCGTTGTCTTATAAACAGGCAATGGAGTCTATGTACTCCAATTCTCTAGAGTTACGAGCACTCGTTAAGGATTTACTTACTGTTAATGGTCATACATCCGTGGACACAAAAATATTCTGCAGTGAAAAGAGTGCAGTTGCGGGTCATTAG

Coding sequence (CDS)

ATGCCAGAGCAAACGCAATCATTGGAAATTTCTAGCCATGAAGTGACTATGATAGACTTTATGGCAAGAAATGATGAAGTAATACGCAGGCTGCAGATCCAAATGGAGCAGACGGTCGATGAGTTGAGGAATAGTCCAATAGAAGCATTGCCTGACAATGAGCAAGGTGAGACAATCAATGTATCGAGCGAGCTTGAATATGGCGAACCTAAGCTCCTAGTAGACAATGATGATCCACCAACCCCTGAAGTGATAAACAAGGTATGGAAGAATAAGGAAATTGAACCCGAGAAACCGGTAGAGATAACCCAAGACATAAAGAAGGAAGAGTTGACCAAACCTGTCAAGGATCAAGTAGAGGAAGAAATAGGAGAATATGAGATAGATTCAGATGAAGGGTTCTTCGTTAAAGTTTCACCCCAAAGTCCAATTTTCAAAAACCAATGCGTACAAGTAAGCCGCCTCCCCCTTGAGCTAGACCTTAAAGCATATTGTGTTCTGAATGAGCGAAACTACGACATGGCAGTAGCAGAAGAGAGAGTTTGGGGTTGTCCAGCACATGTGCTTGTGACGAACCCAAAGAAATTGGAACCACGTTCAAAGATATCAGTACAACAGCAAGAGTTCTTGATACTACTGGACCATCAACAAGGATTCTTGACGGAGCCAGTACATCGAGCCAACATCAAACTTCACAATTTGAGAGGGCATCGACGTAGTGGGAGGGTTGTAACTCAGCCTGACCGTTACGTGAGATTAACAGAATCTCAGGTCGTCATACCTGATGATAGCGTTAAGGATTCGTTGTCTTATAAACAGGCAATGGAGTCTATGTACTCCAATTCTCTAGAGTTACGAGCACTCGTTAAGGATTTACTTACTGTTAATGGTCATACATCCGTGGACACAAAAATATTCTGCAGTGAAAAGAGTGCAGTTGCGGGTCATTAG

Protein sequence

MPEQTQSLEISSHEVTMIDFMARNDEVIRRLQIQMEQTVDELRNSPIEALPDNEQGETINVSSELEYGEPKLLVDNDDPPTPEVINKVWKNKEIEPEKPVEITQDIKKEELTKPVKDQVEEEIGEYEIDSDEGFFVKVSPQSPIFKNQCVQVSRLPLELDLKAYCVLNERNYDMAVAEERVWGCPAHVLVTNPKKLEPRSKISVQQQEFLILLDHQQGFLTEPVHRANIKLHNLRGHRRSGRVVTQPDRYVRLTESQVVIPDDSVKDSLSYKQAMESMYSNSLELRALVKDLLTVNGHTSVDTKIFCSEKSAVAGH
Homology
[Close]
BLAST of Moc09g12490 vs. NCBI nr
Match: XP_022157694.1 (uncharacterized protein LOC111024352 [Momordica charantia])

HSP 1 Score: 236.5 bits (602), Expect = 3.1e-58
Identity = 135/211 (63.98%), Postives = 148/211 (70.14%), Query Frame = 0 

Query: 1   MPEQTQSLEISSHEVTMIDFMARNDEVIRRLQIQMEQTVDELRNSPIEALPDN--EQGET 60
           MPEQT  LE+ S E TMIDFMAR DE IRRLQIQ+E  VDELRNSP EALP N  EQGE 
Sbjct: 1   MPEQTHLLEVFSLEQTMIDFMARTDESIRRLQIQVELMVDELRNSPSEALPTNMEEQGEA 60

Query: 61  INVSSELEYGEPKLLVDNDDPPTPEVINKVWKNKEIEPEKPV------------------ 120
            N  SELE  E +L +DNDDPP PEVIN+VWKNKE+EPEKP+                  
Sbjct: 61  FNERSELEDDELELPIDNDDPPIPEVINEVWKNKEVEPEKPIEVMEHELTMDLNPSPLNI 120

Query: 121 -----------EITQDIKKEELTKPVKDQVEEEIGEYEIDSDEGFFVKVSPQSPIFKNQC 180
                      EITQ I+KEELTKPV+DQV  E+GE  I SDEGF+VKVS Q PIFKNQC
Sbjct: 121 GPLFPFPRCSLEITQYIQKEELTKPVEDQVNGELGEDVIGSDEGFYVKVSSQIPIFKNQC 180

[Close]
BLAST of Moc09g12490 vs. NCBI nr
Match: XP_022149401.1 (uncharacterized protein LOC111017826 [Momordica charantia])

HSP 1 Score: 105.5 bits (262), Expect = 8.4e-19
Identity = 64/135 (47.41%), Postives = 81/135 (60.00%), Query Frame = 0 

Query: 63  SELEYGEPKLLVDNDDPPTPEVINKVWKNKEIEPEKPV---------------------- 122
           SELEY EP+LLVDNDDPPTPEV+N+VWKNK++E E+P+                      
Sbjct: 20  SELEYDEPELLVDNDDPPTPEVMNEVWKNKKVEEEEPIEVIEHKVAIDLSPSPLKIGPFF 79

Query: 123 -------EITQDIKKEELTKPVKDQVEEEIGEYEIDSDEGFFVKVSPQS-PIFKNQCVQV 168
                  EI  DIKKEELT+   D+++ EIGE E+ SDEGF+ K    +  +FKN+ +QV
Sbjct: 80  PFPQRSLEINNDIKKEELTQHFNDKIKGEIGEDEVGSDEGFYFKEEKTTIQLFKNKFIQV 139

[Close]
BLAST of Moc09g12490 vs. NCBI nr
Match: TYK15984.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 93.6 bits (231), Expect = 3.3e-15
Identity = 72/199 (36.18%), Postives = 90/199 (45.23%), Query Frame = 0 

Query: 152 VSRLPLELDLKAYCVLNERNYDMAVAEERVWGCPAHVLVTNPKKLEPRSKIS-------- 211
           VS++P EL          R    +++  R+WGCPAHVLVTNPKKLEPRS++         
Sbjct: 165 VSKIPFEL---------WRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKE 224

Query: 212 ------VQQQEFLILLDHQQGFLTEP---VHRANIKL----------------------- 271
                    QE  + +     FL E     H+   KL                       
Sbjct: 225 TRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVD 284

Query: 272 -----------HNLRGHRRSGRVVTQPDRYVRLTESQVVIPDDSVKDSLSYKQA------ 284
                       +LR  RRSGRVV+QP+RY+ LTE+QVVIPDD V+D LSYKQA      
Sbjct: 285 ETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDK 344

[Close]
BLAST of Moc09g12490 vs. NCBI nr
Match: KAA0058278.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 93.2 bits (230), Expect = 4.3e-15
Identity = 72/199 (36.18%), Postives = 89/199 (44.72%), Query Frame = 0 

Query: 152 VSRLPLELDLKAYCVLNERNYDMAVAEERVWGCPAHVLVTNPKKLEPRSKIS-------- 211
           VS +P EL          R    +++  R+WGCPAHVLVTNPKKLEPRS++         
Sbjct: 395 VSEIPFEL---------WRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKE 454

Query: 212 ------VQQQEFLILLDHQQGFLTEP---VHRANIKL----------------------- 271
                    QE  + +     FL E     H+   KL                       
Sbjct: 455 TRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVD 514

Query: 272 -----------HNLRGHRRSGRVVTQPDRYVRLTESQVVIPDDSVKDSLSYKQA------ 284
                       +LR  RRSGRVV+QP+RY+ LTE+QVVIPDD V+D LSYKQA      
Sbjct: 515 ETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDK 574

[Close]
BLAST of Moc09g12490 vs. NCBI nr
Match: KAA0058368.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 92.8 bits (229), Expect = 5.6e-15
Identity = 72/199 (36.18%), Postives = 88/199 (44.22%), Query Frame = 0 

Query: 152 VSRLPLELDLKAYCVLNERNYDMAVAEERVWGCPAHVLVTNPKKLEPRSKIS-------- 211
           VS  P EL          R    +++  R+WGCPAHVLVTNPKKLEPRS++         
Sbjct: 361 VSETPFEL---------RRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKE 420

Query: 212 ------VQQQEFLILLDHQQGFLTEP---VHRANIKL----------------------- 271
                    QE  + +     FL E     H+   KL                       
Sbjct: 421 TRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVD 480

Query: 272 -----------HNLRGHRRSGRVVTQPDRYVRLTESQVVIPDDSVKDSLSYKQA------ 284
                       +LR  RRSGRVV+QP+RY+ LTE+QVVIPDD V+D LSYKQA      
Sbjct: 481 ETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDK 540

[Close]
BLAST of Moc09g12490 vs. ExPASy TrEMBL
Match: A0A6J1DXA5 (uncharacterized protein LOC111024352 OS=Momordica charantia OX=3673 GN=LOC111024352 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.5e-58
Identity = 135/211 (63.98%), Postives = 148/211 (70.14%), Query Frame = 0 

Query: 1   MPEQTQSLEISSHEVTMIDFMARNDEVIRRLQIQMEQTVDELRNSPIEALPDN--EQGET 60
           MPEQT  LE+ S E TMIDFMAR DE IRRLQIQ+E  VDELRNSP EALP N  EQGE 
Sbjct: 1   MPEQTHLLEVFSLEQTMIDFMARTDESIRRLQIQVELMVDELRNSPSEALPTNMEEQGEA 60

Query: 61  INVSSELEYGEPKLLVDNDDPPTPEVINKVWKNKEIEPEKPV------------------ 120
            N  SELE  E +L +DNDDPP PEVIN+VWKNKE+EPEKP+                  
Sbjct: 61  FNERSELEDDELELPIDNDDPPIPEVINEVWKNKEVEPEKPIEVMEHELTMDLNPSPLNI 120

Query: 121 -----------EITQDIKKEELTKPVKDQVEEEIGEYEIDSDEGFFVKVSPQSPIFKNQC 180
                      EITQ I+KEELTKPV+DQV  E+GE  I SDEGF+VKVS Q PIFKNQC
Sbjct: 121 GPLFPFPRCSLEITQYIQKEELTKPVEDQVNGELGEDVIGSDEGFYVKVSSQIPIFKNQC 180

[Close]
BLAST of Moc09g12490 vs. ExPASy TrEMBL
Match: A0A6J1D894 (uncharacterized protein LOC111017826 OS=Momordica charantia OX=3673 GN=LOC111017826 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.1e-19
Identity = 64/135 (47.41%), Postives = 81/135 (60.00%), Query Frame = 0 

Query: 63  SELEYGEPKLLVDNDDPPTPEVINKVWKNKEIEPEKPV---------------------- 122
           SELEY EP+LLVDNDDPPTPEV+N+VWKNK++E E+P+                      
Sbjct: 20  SELEYDEPELLVDNDDPPTPEVMNEVWKNKKVEEEEPIEVIEHKVAIDLSPSPLKIGPFF 79

Query: 123 -------EITQDIKKEELTKPVKDQVEEEIGEYEIDSDEGFFVKVSPQS-PIFKNQCVQV 168
                  EI  DIKKEELT+   D+++ EIGE E+ SDEGF+ K    +  +FKN+ +QV
Sbjct: 80  PFPQRSLEINNDIKKEELTQHFNDKIKGEIGEDEVGSDEGFYFKEEKTTIQLFKNKFIQV 139

[Close]
BLAST of Moc09g12490 vs. ExPASy TrEMBL
Match: A0A5D3CYF4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G001110 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.6e-15
Identity = 72/199 (36.18%), Postives = 90/199 (45.23%), Query Frame = 0 

Query: 152 VSRLPLELDLKAYCVLNERNYDMAVAEERVWGCPAHVLVTNPKKLEPRSKIS-------- 211
           VS++P EL          R    +++  R+WGCPAHVLVTNPKKLEPRS++         
Sbjct: 165 VSKIPFEL---------WRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKE 224

Query: 212 ------VQQQEFLILLDHQQGFLTEP---VHRANIKL----------------------- 271
                    QE  + +     FL E     H+   KL                       
Sbjct: 225 TRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVD 284

Query: 272 -----------HNLRGHRRSGRVVTQPDRYVRLTESQVVIPDDSVKDSLSYKQA------ 284
                       +LR  RRSGRVV+QP+RY+ LTE+QVVIPDD V+D LSYKQA      
Sbjct: 285 ETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDK 344

[Close]
BLAST of Moc09g12490 vs. ExPASy TrEMBL
Match: A0A5A7USZ2 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006070 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.1e-15
Identity = 72/199 (36.18%), Postives = 89/199 (44.72%), Query Frame = 0 

Query: 152 VSRLPLELDLKAYCVLNERNYDMAVAEERVWGCPAHVLVTNPKKLEPRSKIS-------- 211
           VS +P EL          R    +++  R+WGCPAHVLVTNPKKLEPRS++         
Sbjct: 395 VSEIPFEL---------WRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKE 454

Query: 212 ------VQQQEFLILLDHQQGFLTEP---VHRANIKL----------------------- 271
                    QE  + +     FL E     H+   KL                       
Sbjct: 455 TRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVD 514

Query: 272 -----------HNLRGHRRSGRVVTQPDRYVRLTESQVVIPDDSVKDSLSYKQA------ 284
                       +LR  RRSGRVV+QP+RY+ LTE+QVVIPDD V+D LSYKQA      
Sbjct: 515 ETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDK 574

[Close]
BLAST of Moc09g12490 vs. ExPASy TrEMBL
Match: A0A5A7U4E6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001180 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.7e-15
Identity = 59/153 (38.56%), Postives = 75/153 (49.02%), Query Frame = 0 

Query: 180 RVWGCPAHVLVTNPKKLEPRSKIS--------------VQQQEFLILLDHQQGFLTEP-- 239
           R+WGCPAHVLVTNPKKLEPRS++                  QE ++ +     FL E   
Sbjct: 54  RIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKKTRGGLFFDPQENIVFVSKNATFLEEDHM 113

Query: 240 -VHRANIKL----------------------------------HNLRGHRRSGRVVTQPD 282
             H+   KL                                   +LR  RRSGR+V+QP+
Sbjct: 114 RDHKPRNKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRIVSQPN 173

The following BLAST results are available for this feature:
BLAST of Moc09g12490 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022157694.13.1e-5863.98uncharacterized protein LOC111024352 [Momordica charantia][more]
XP_022149401.18.4e-1947.41uncharacterized protein LOC111017826 [Momordica charantia][more]
TYK15984.13.3e-1536.18gag/pol protein [Cucumis melo var. makuwa][more]
KAA0058278.14.3e-1536.18gag/pol protein [Cucumis melo var. makuwa][more]
KAA0058368.15.6e-1536.18gag/pol protein [Cucumis melo var. makuwa][more]
BLAST of Moc09g12490 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc09g12490 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DXA51.5e-5863.98uncharacterized protein LOC111024352 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1D8944.1e-1947.41uncharacterized protein LOC111017826 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A5D3CYF41.6e-1536.18Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00111... [more]
A0A5A7USZ22.1e-1536.18Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G0060... [more]
A0A5A7U4E62.7e-1538.56Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G0011... [more]
BLAST of Moc09g12490 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc09g12490.1Moc09g12490.1mRNA