Moc09g12360 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g12360
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	ULP_PROTEASE domain-containing protein
Location	chr9: 10476605 .. 10478187 (-)
RNA-Seq Expression	Moc09g12360
Synteny	Moc09g12360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAAGTATGAGGGCCGAGGTGAACCTGGCCAAGGTCCGACCTAGCGGGAAGCTCGGTGGGGCCGATGTGAGCTACTGTCAGCGGCGTGATTATCGGGTATAGCCGTCGGTCCCGAGATTACCGGGTGTAACCGACGGTCCTGAGATTACCGGGTGTAACCGTCACGAGATTAGCGGGACTACCACCCATAAGTAGAGGACTTCACTCCACGATCAGATACGATGATTTCTGACCTCGAACTAAACTGGGAATCCGACCTATACTGACTTGATCGTCGGAGTGCTCACCTTTTTGTGCAGGTCCGCCCAAGTATTCAGATCGGTCCGGAGGCCGAGTTCGAGCTGCAATCAGAAGTACACTGTTGTGCATATCCTTGCATAAACAGATGTAATTATTATGTCATCTTAGTTCATGGAAGTTATGGTTTTTAAACATAGGCTAACTTTCACCTTAACAATTTTTTGTAAAAATATTTGCTGCTAGTTTAATAACTCTAAAGCATCTGTTGTCTAGTATTGTTTCATTAAGAAATGTTAGAGTTTACAAATGGTCTCATACATAAGGCTTCTTACTAAACTATCATATGGAACTGACAAATGGTTCTTCAATTTCATATGATGTAGAAGGAAACTGACATGTTGACAGCTTAAAATGTTGGGCTAATGTAGTTTTAACTGTCTTAGCAGACTCCAAATGGAAACGTTTTATCACCTTGTTCAAGTATTCAGCTTGTGATATAAACAATATGAGTTTCTTGGACAACCTCTTTGAAGCTCCATACCCAGAATTTTCTTGCCTTGACCCAAGTCCTTCATCTCAAATTCACTTCTAAGTTCATATTTTATCTTCTCAATCTCGTTTTTATCTTTAGAAGCTATCAAGATGTCATCGACATAGAGGAGGAGTAGAACAAAGACATCCCTAGTAATAACTTTCTTATATACACAACAATCATAATAATTTTTCTTGAGTCCCTTTGCTATATACACAAGGAAAATGAGTGGGGAAGAATATGACATTTTTTCTTGACTCGATGAGAAATCGTCTAACAGACGATATTCTTAGTGTCATCACCATGTAAGTGTACTGCATGCCTCCTCATGTAGTATTGAATATTTCTTAGCATATATAATGATGAAATATCTTATATGAGTCACTTGGTGTAAGGTTGTAAGAAATATACAGAAAAAACCATTTGCTCTGAAGCGTGTACCGGTAAAGCGTTTTTCGAGTTCAATTATTTGTCTGGATTTATATGTAACTTATTCATTGCGGTGTATTATTTATATGTTATATTCACAGTGTCCAAAACAACCGAATGCAGTAGAATGTGGATACTATGTCATGCGGTTCATGCATGACATAGTCTTTGCTCATAACACAACAACCCCAGAATGCGTACGTATATAACATAGTGTGAATGTTTGAATAATAATATATATTCTCACATTGCATTGCTTTGACTTTGATATAAATATGTATAGATGAAAGGGGCACCGCAGTGTTACACACAGGAGCACTTGGATGTGATTAGGAAGGAGTTGGCAGAGTTCATACTCTCGCACATATACTTTTCGTAG

mRNA sequence

ATGCTAAGTATGAGGGCCGAGGTGAACCTGGCCAAGGTCCGACCTAGCGGGAAGCTCGGTGGGGCCGATGTGAGCTACTGTCAGCGGCGTGATTATCGGGTCCGCCCAAGTATTCAGATCGGTCCGGAGGCCGAGTTCGAGCTGCAATCAGAATGTCCAAAACAACCGAATGCAGTAGAATGTGGATACTATGTCATGCGGTTCATGCATGACATAGTCTTTGCTCATAACACAACAACCCCAGAATGCATGAAAGGGGCACCGCAGTGTTACACACAGGAGCACTTGGATGTGATTAGGAAGGAGTTGGCAGAGTTCATACTCTCGCACATATACTTTTCGTAG

Coding sequence (CDS)

ATGCTAAGTATGAGGGCCGAGGTGAACCTGGCCAAGGTCCGACCTAGCGGGAAGCTCGGTGGGGCCGATGTGAGCTACTGTCAGCGGCGTGATTATCGGGTCCGCCCAAGTATTCAGATCGGTCCGGAGGCCGAGTTCGAGCTGCAATCAGAATGTCCAAAACAACCGAATGCAGTAGAATGTGGATACTATGTCATGCGGTTCATGCATGACATAGTCTTTGCTCATAACACAACAACCCCAGAATGCATGAAAGGGGCACCGCAGTGTTACACACAGGAGCACTTGGATGTGATTAGGAAGGAGTTGGCAGAGTTCATACTCTCGCACATATACTTTTCGTAG

Protein sequence

MLSMRAEVNLAKVRPSGKLGGADVSYCQRRDYRVRPSIQIGPEAEFELQSECPKQPNAVECGYYVMRFMHDIVFAHNTTTPECMKGAPQCYTQEHLDVIRKELAEFILSHIYFS

Homology

[Close]

BLAST of Moc09g12360 vs. NCBI nr
Match: XP_022156878.1 (uncharacterized protein LOC111023711 [Momordica charantia])

HSP 1 Score: 128.3 bits (321), Expect = 4.4e-26
Identity = 57/63 (90.48%), Postives = 59/63 (93.65%), Query Frame = 0


Query: 52  CPKQPNAVECGYYVMRFMHDIVFAHNTTTPECMKGAPQCYTQEHLDVIRKELAEFILSHI 111
           CPKQPNAVECGYYV+RFM DIVFA NTT PECMKGAPQCYTQEHLDVIR+ELAEF LSHI
Sbjct: 272 CPKQPNAVECGYYVIRFMRDIVFARNTTIPECMKGAPQCYTQEHLDVIRRELAEFKLSHI 331

Query: 112 YFS 115
           YFS
Sbjct: 332 YFS 334

[Close]

BLAST of Moc09g12360 vs. NCBI nr
Match: KAA0067083.1 (uncharacterized protein E6C27_scaffold38G001360 [Cucumis melo var. makuwa] >TYK26318.1 uncharacterized protein E5676_scaffold14G00990 [Cucumis melo var. makuwa])

HSP 1 Score: 79.7 bits (195), Expect = 1.8e-11
Identity = 33/62 (53.23%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 51  ECPKQPNAVECGYYVMRFMHDIVFAHNTTTPECMKGAPQCYTQEHLDVIRKELAEFILSH 110
           +CPKQ   VECGYYVMRFM DI+ + +T+  + MK +P+ YTQ+ +D IR E AEF+  H
Sbjct: 460 KCPKQSGKVECGYYVMRFMRDIILSMSTSIIDIMKDSPRTYTQDDIDCIRSEWAEFVGKH 519

Query: 111 IY 113
           +Y
Sbjct: 520 VY 521

[Close]

BLAST of Moc09g12360 vs. NCBI nr
Match: TYK04924.1 (hypothetical protein E5676_scaffold143G001330 [Cucumis melo var. makuwa])

HSP 1 Score: 79.3 bits (194), Expect = 2.3e-11
Identity = 36/89 (40.45%), Postives = 53/89 (59.55%), Query Frame = 0


Query: 33  RVRPSIQIGPEAEFELQS---------ECPKQPNAVECGYYVMRFMHDIVFAHNTTTPEC 92
           R+ P +    E  F + +         +CPKQ   VECGYYVMRFM DI+ + +T+  + 
Sbjct: 210 RIDPDVTEVAERSFNIMNKKKPNWRVVKCPKQSGVVECGYYVMRFMRDIIMSTSTSIIQI 269

Query: 93  MKGAPQCYTQEHLDVIRKELAEFILSHIY 113
           MK +P+ YTQ+ +D IR E AEF+  H++
Sbjct: 270 MKDSPRAYTQDDIDCIRSEWAEFVGKHVH 298

[Close]

BLAST of Moc09g12360 vs. NCBI nr
Match: TYK18000.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 79.0 bits (193), Expect = 3.0e-11
Identity = 32/62 (51.61%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 51  ECPKQPNAVECGYYVMRFMHDIVFAHNTTTPECMKGAPQCYTQEHLDVIRKELAEFILSH 110
           +CPKQ   VECGYYVMRFM DI+ + +T+  + MK +P+ YTQ+ +D IR E AEF+  H
Sbjct: 420 KCPKQSGVVECGYYVMRFMRDIIMSTSTSIIQIMKDSPRAYTQDEIDCIRSEWAEFVGKH 479

Query: 111 IY 113
           ++
Sbjct: 480 VH 481

[Close]

BLAST of Moc09g12360 vs. NCBI nr
Match: XP_031743768.1 (uncharacterized protein LOC116404661 [Cucumis sativus])

HSP 1 Score: 79.0 bits (193), Expect = 3.0e-11
Identity = 32/62 (51.61%), Postives = 44/62 (70.97%), Query Frame = 0


Query: 51  ECPKQPNAVECGYYVMRFMHDIVFAHNTTTPECMKGAPQCYTQEHLDVIRKELAEFILSH 110
           +CPKQ   VECGYYVMRFM DI+ A +T+  + MK  P  Y+Q+ +D +R ELAEF+  H
Sbjct: 153 KCPKQNRVVECGYYVMRFMRDIISARSTSIVDVMKSLPPTYSQDEIDEVRSELAEFLSKH 212

Query: 111 IY 113
           ++
Sbjct: 213 VH 214

[Close]

BLAST of Moc09g12360 vs. ExPASy TrEMBL
Match: A0A6J1DRT3 (uncharacterized protein LOC111023711 OS=Momordica charantia OX=3673 GN=LOC111023711 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.1e-26
Identity = 57/63 (90.48%), Postives = 59/63 (93.65%), Query Frame = 0


Query: 52  CPKQPNAVECGYYVMRFMHDIVFAHNTTTPECMKGAPQCYTQEHLDVIRKELAEFILSHI 111
           CPKQPNAVECGYYV+RFM DIVFA NTT PECMKGAPQCYTQEHLDVIR+ELAEF LSHI
Sbjct: 272 CPKQPNAVECGYYVIRFMRDIVFARNTTIPECMKGAPQCYTQEHLDVIRRELAEFKLSHI 331

Query: 112 YFS 115
           YFS
Sbjct: 332 YFS 334

[Close]

BLAST of Moc09g12360 vs. ExPASy TrEMBL
Match: A0A5D3DS26 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G00990 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 8.6e-12
Identity = 33/62 (53.23%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 51  ECPKQPNAVECGYYVMRFMHDIVFAHNTTTPECMKGAPQCYTQEHLDVIRKELAEFILSH 110
           +CPKQ   VECGYYVMRFM DI+ + +T+  + MK +P+ YTQ+ +D IR E AEF+  H
Sbjct: 460 KCPKQSGKVECGYYVMRFMRDIILSMSTSIIDIMKDSPRTYTQDDIDCIRSEWAEFVGKH 519

Query: 111 IY 113
           +Y
Sbjct: 520 VY 521

[Close]

BLAST of Moc09g12360 vs. ExPASy TrEMBL
Match: A0A5D3C0Y2 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001330 PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.1e-11
Identity = 36/89 (40.45%), Postives = 53/89 (59.55%), Query Frame = 0


Query: 33  RVRPSIQIGPEAEFELQS---------ECPKQPNAVECGYYVMRFMHDIVFAHNTTTPEC 92
           R+ P +    E  F + +         +CPKQ   VECGYYVMRFM DI+ + +T+  + 
Sbjct: 210 RIDPDVTEVAERSFNIMNKKKPNWRVVKCPKQSGVVECGYYVMRFMRDIIMSTSTSIIQI 269

Query: 93  MKGAPQCYTQEHLDVIRKELAEFILSHIY 113
           MK +P+ YTQ+ +D IR E AEF+  H++
Sbjct: 270 MKDSPRAYTQDDIDCIRSEWAEFVGKHVH 298

[Close]

BLAST of Moc09g12360 vs. ExPASy TrEMBL
Match: A0A5D3D2T0 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003090 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.5e-11
Identity = 32/62 (51.61%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 51  ECPKQPNAVECGYYVMRFMHDIVFAHNTTTPECMKGAPQCYTQEHLDVIRKELAEFILSH 110
           +CPKQ   VECGYYVMRFM DI+ + +T+  + MK +P+ YTQ+ +D IR E AEF+  H
Sbjct: 420 KCPKQSGVVECGYYVMRFMRDIIMSTSTSIIQIMKDSPRAYTQDEIDCIRSEWAEFVGKH 479

Query: 111 IY 113
           ++
Sbjct: 480 VH 481

[Close]

BLAST of Moc09g12360 vs. ExPASy TrEMBL
Match: A0A5A7V8W7 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004920 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.5e-11
Identity = 32/62 (51.61%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 51  ECPKQPNAVECGYYVMRFMHDIVFAHNTTTPECMKGAPQCYTQEHLDVIRKELAEFILSH 110
           +CPKQ   VECGYYVMRFM DI+ + +T+  + MK +P+ YTQ+ +D IR E AEF+  H
Sbjct: 539 QCPKQSGVVECGYYVMRFMRDIIMSTSTSIIQIMKDSPRAYTQDDIDCIRSEWAEFVGKH 598

Query: 111 IY 113
           ++
Sbjct: 599 VH 600

The following BLAST results are available for this feature:

BLAST of Moc09g12360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156878.1	4.4e-26	90.48	uncharacterized protein LOC111023711 [Momordica charantia]	[more]
KAA0067083.1	1.8e-11	53.23	uncharacterized protein E6C27_scaffold38G001360 [Cucumis melo var. makuwa] >TYK2...	[more]
TYK04924.1	2.3e-11	40.45	hypothetical protein E5676_scaffold143G001330 [Cucumis melo var. makuwa]	[more]
TYK18000.1	3.0e-11	51.61	transposase [Cucumis melo var. makuwa]	[more]
XP_031743768.1	3.0e-11	51.61	uncharacterized protein LOC116404661 [Cucumis sativus]	[more]

BLAST of Moc09g12360 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc09g12360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DRT3	2.1e-26	90.48	uncharacterized protein LOC111023711 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A5D3DS26	8.6e-12	53.23	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5D3C0Y2	1.1e-11	40.45	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5D3D2T0	1.5e-11	51.61	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003090 P...	[more]
A0A5A7V8W7	1.5e-11	51.61	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of Moc09g12360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003653	Ulp1 protease family, C-terminal catalytic domain	PFAM	PF02902	Peptidase_C48	coord: 49..104 e-value: 2.3E-4 score: 21.1
None	No IPR available	GENE3D	3.40.395.10	Adenoviral Proteinase; Chain A	coord: 22..111 e-value: 9.4E-8 score: 33.7
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 46..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g12360.1	Moc09g12360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity