Moc09g07480 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc09g07480
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionProtein no-on-transient A-like
Locationchr9: 5909827 .. 5911394 (+)
RNA-Seq ExpressionMoc09g07480
SyntenyMoc09g07480
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCCATTAAAGCCCTAGTTCCGTTACTTCTTCTCGCTCTTCTCTTGTTCTCTGAATCCCTAGCCACTTCCGCCGCCGCTCACGGCGAGCCTTGGAATTCGCCCTCCGGAATGCTCTGCCGGAACATTCTTCAGACGGCGGCTCATCGGATTGCAGATAACGGTGCAGAGTCCTCTTCCGGAGGGAAAATCAACGTTCATATCAAAAAGGGGATCGGATCCAGACCTAGAGTAATTCCCGGCCGTCGTACACCGACGGTGAAGCGAATTCCCGGCCGTCGTACATCGGCGGCGAATCGGAGCCGAGTAGCATTCTTCGGCGTCGGATCACTGTGTATCTGCATTTTTTTCGGATTGTTCGTGTGAATGATTTTTTTTTTCTGTGTAAAAATTGGATTCAGATTTATTTATTTATTTGATGAAATACTGGAGTGTATGTATGTATTTTATTTTTTATTTTTTATTTTTTTGGAAAATACTGGAGTGTATTTGTTTTTTTTTTTAATTACATAGTCTATAAAAATTTCACTAGTGTCCATTTTAGACAAATATTTAAATATCTGTACTGGCCCATTTATGATACATGTCCGTAAGAAAATATGTCCCAATAGATATCTTATATCTGTGATGGTGGACTGGTTAATGTATGTATTTTCAATAAAATAGATATCTTATATTTGTGATGGTTGACTGGTTATTGTATCTATTTTCAATTAAAAAAATTTGAGTTTGAATTTTTATGTACAAGTTGTATAAAAAAAAAAAAGAAAAAATAGGTATTTTATATTTTTTAAAAATGAAAAAAATTGAGAAAGAATCGAGAAGAGAAATTTGGGAAAGAATGGAGGAGAGAGATTTATTTCCACCGTGAGATTCAATTGCCATAGAGGCCTCCGATTCGTGGAATCTCTTCACTAATGTTGAATCTGTGGGAAAAGATATACGAATTTTTGAATTATGGCAGCAGTAAAAATGTTTGATATTAAGATTTTATCATTTAATACGAATATTCTATATTAATTAATATTTATACATTCTAAAATATACTATTTATTGAGAGCTGAGAACCACAAAAAAAAAAATCTATAAATGGCGATTACACATTTTTACCTCCATCTCCGTTCTTCGATTCTCTTCTCCATAAAAAAAAAAAAACACTCAAATCGATGGCCGCCAATAAAGCCTTAGTTCCGTTACTTCTTCTCTAGCTGCTCTTGTTCTCTGAGCCGCTAGCCAGTTCCGCCGCCGCTCACGGCGAGGCTTCGAATTCCCCTACAGGAACGCTCCGCCGGAACATTCTTCAGACGGCGGATCATCGGATTGCAGATAACGGTGCTGAGTTCTCTTCCGAAGGGAAAATCAATGTTCATATCAGAAAGGGGATCCGAGCCCGACCTATAGGAATTCCCGGCCGTCGTACACCGGCGGCGAATCCAATTCCCGTCCATCCTATTCTAATTCCCGGCCATCGTAAATCGGCGGCGAACCGGAGCCGAGCTGCGTCATTTGGCGTTGGATCTGTGCTGTGTTTCTCTATCTGCATTTTCTTGAGATTCTTCGTGTGA

mRNA sequence

ATGGCTGCCATTAAAGCCCTAGTTCCGTTACTTCTTCTCGCTCTTCTCTTGTTCTCTGAATCCCTAGCCACTTCCGCCGCCGCTCACGGCGAGCCTTGGAATTCGCCCTCCGGAATGCTCTGCCGGAACATTCTTCAGACGGCGGCTCATCGGATTGCAGATAACGGTGCAGAGTCCTCTTCCGGAGGGAAAATCAACGTTCATATCAAAAAGGGGATCGGATCCAGACCTAGAGTAATTCCCGGCCGTCGTACACCGACGGTGAAGCGAATTCCCGGCCGTCGTACATCGGCGGCGAATCGGAGCCGAGTAGCATTCTTCGGCGTCGGATCACTTTCCGCCGCCGCTCACGGCGAGGCTTCGAATTCCCCTACAGGAACGCTCCGCCGGAACATTCTTCAGACGGCGGATCATCGGATTGCAGATAACGGTGCTGAGTTCTCTTCCGAAGGGAAAATCAATGTTCATATCAGAAAGGGGATCCGAGCCCGACCTATAGGAATTCCCGGCCGTCGTACACCGGCGGCGAATCCAATTCCCGTCCATCCTATTCTAATTCCCGGCCATCGTAAATCGGCGGCGAACCGGAGCCGAGCTGCGTCATTTGGCGTTGGATCTGTGCTGTGTTTCTCTATCTGCATTTTCTTGAGATTCTTCGTGTGA

Coding sequence (CDS)

ATGGCTGCCATTAAAGCCCTAGTTCCGTTACTTCTTCTCGCTCTTCTCTTGTTCTCTGAATCCCTAGCCACTTCCGCCGCCGCTCACGGCGAGCCTTGGAATTCGCCCTCCGGAATGCTCTGCCGGAACATTCTTCAGACGGCGGCTCATCGGATTGCAGATAACGGTGCAGAGTCCTCTTCCGGAGGGAAAATCAACGTTCATATCAAAAAGGGGATCGGATCCAGACCTAGAGTAATTCCCGGCCGTCGTACACCGACGGTGAAGCGAATTCCCGGCCGTCGTACATCGGCGGCGAATCGGAGCCGAGTAGCATTCTTCGGCGTCGGATCACTTTCCGCCGCCGCTCACGGCGAGGCTTCGAATTCCCCTACAGGAACGCTCCGCCGGAACATTCTTCAGACGGCGGATCATCGGATTGCAGATAACGGTGCTGAGTTCTCTTCCGAAGGGAAAATCAATGTTCATATCAGAAAGGGGATCCGAGCCCGACCTATAGGAATTCCCGGCCGTCGTACACCGGCGGCGAATCCAATTCCCGTCCATCCTATTCTAATTCCCGGCCATCGTAAATCGGCGGCGAACCGGAGCCGAGCTGCGTCATTTGGCGTTGGATCTGTGCTGTGTTTCTCTATCTGCATTTTCTTGAGATTCTTCGTGTGA

Protein sequence

MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAAHRIADNGAESSSGGKINVHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAANRSRVAFFGVGSLSAAAHGEASNSPTGTLRRNILQTADHRIADNGAEFSSEGKINVHIRKGIRARPIGIPGRRTPAANPIPVHPILIPGHRKSAANRSRAASFGVGSVLCFSICIFLRFFV
Homology
BLAST of Moc09g07480 vs. NCBI nr
Match: KAG6575859.1 (hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014393.1 hypothetical protein SDJN02_24570, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 92.4 bits (228), Expect = 5.1e-15
Identity = 61/112 (54.46%), Postives = 72/112 (64.29%), Query Frame = 0

Query: 1   MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAAHRIADNGAESS 60
           MAA+K+LV + LLALLLFSESL  SA       NS +GML RN+LQTAAH+IADN  ESS
Sbjct: 1   MAALKSLVSVALLALLLFSESLTASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVESS 60

Query: 61  SGGKINVHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAANRSRVAFFGVGSL 113
              K+NVHIK+           R  P      G R+SAANRSR+A  GVGS+
Sbjct: 61  PERKMNVHIKR-----------RMRPVA---TGTRSSAANRSRIASIGVGSV 98

BLAST of Moc09g07480 vs. NCBI nr
Match: KAA0068047.1 (protein no-on-transient A-like [Cucumis melo var. makuwa] >TYK18081.1 protein no-on-transient A-like [Cucumis melo var. makuwa])

HSP 1 Score: 85.1 bits (209), Expect = 8.2e-13
Identity = 61/112 (54.46%), Postives = 73/112 (65.18%), Query Frame = 0

Query: 1   MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAAHRIADNGAESS 60
           MAAIK+L+ + LLALL FSESL+TSAA      NS +GML RN+LQTA H IAD      
Sbjct: 1   MAAIKSLLFISLLALLFFSESLSTSAADCRGASNSVTGMLRRNVLQTATHEIAD------ 60

Query: 61  SGGKINVHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAANRSRVAFFGVGSL 113
           S GK+NVHIK+G G R R +      T     G R SAA+RS+VA FG+G L
Sbjct: 61  SEGKMNVHIKRGGGGRIRPVAAGTGFT-----GNRKSAASRSQVASFGLGFL 101

BLAST of Moc09g07480 vs. NCBI nr
Match: KAG6575858.1 (hypothetical protein SDJN03_26497, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 84.0 bits (206), Expect = 1.8e-12
Identity = 77/206 (37.38%), Postives = 99/206 (48.06%), Query Frame = 0

Query: 1   MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTA-AHRIADNGAES 60
           MA IK+L+ + LLALLL SE L  SAA HG   +  +G+  R+ LQTA  H++A+NG   
Sbjct: 1   MAPIKSLISIALLALLLLSEHLPISAADHGVAPSPLAGVFRRDTLQTAERHQVAENGI-- 60

Query: 61  SSGGKINVHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAANRSRVAFFGVGSLSAAAHGE 120
             G + +   K         I  R    V+R  G   S+AN SR + FG+GSL       
Sbjct: 61  --GYQYSFEQK---------IRRRARRAVRRAEGPSPSSANWSRTSSFGIGSLLCLC--- 120

Query: 121 ASNSPTGTLRRNILQTADHRIADNGAEFSSEGKINVHIRKGIRARPIGIPGRRTPAANPI 180
                 G       QTA    A+N  E SSE K NVHI+K IR                 
Sbjct: 121 ----TPGRFAGTSFQTAAQPTAENYGESSSEEKTNVHIKKRIR----------------- 166

Query: 181 PVHPILIPGHRKS-AANRSRAASFGV 205
              P+LI GH ++ AANRS   SFG+
Sbjct: 181 ---PLLIGGHNRTFAANRSPTPSFGI 166

BLAST of Moc09g07480 vs. NCBI nr
Match: KGN44886.1 (hypothetical protein Csa_015765 [Cucumis sativus])

HSP 1 Score: 82.8 bits (203), Expect = 4.1e-12
Identity = 64/112 (57.14%), Postives = 72/112 (64.29%), Query Frame = 0

Query: 1   MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAAHRIADNGAESS 60
           MAAIK+L+ + LLALL FSESL+TSAA      NS + ML RNILQTA H IAD      
Sbjct: 1   MAAIKSLISISLLALLFFSESLSTSAANCRGASNSVTAMLRRNILQTATHEIAD------ 60

Query: 61  SGGKINVHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAANRSRVAFFGVGSL 113
           S GK+NV IKKG   R R I G  T T     G R+SAANRSRV  FG+G L
Sbjct: 61  SEGKMNVRIKKGGLGRFRPI-GAGTGT-----GTRSSAANRSRVDSFGLGFL 100

BLAST of Moc09g07480 vs. NCBI nr
Match: KAG6593163.1 (hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 75.9 bits (185), Expect = 5.0e-10
Identity = 57/114 (50.00%), Postives = 71/114 (62.28%), Query Frame = 0

Query: 1   MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAA--HRIADNGAE 60
           MAAIKAL+ + L+ALLLF ESL TSAA H     S +G+L RNI+QT A  H++A+    
Sbjct: 1   MAAIKALLSIALIALLLFFESLPTSAAVHRGASTSLAGILRRNIVQTTADHHQVAEK--- 60

Query: 61  SSSGGKINVHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAANRSRVAFFGVGSL 113
                K NVHIK+ +  RP V+ GR           +TSAANRSR AF GVGS+
Sbjct: 61  -----KFNVHIKRRMRMRP-VLIGR----------PKTSAANRSREAFCGVGSM 95

BLAST of Moc09g07480 vs. ExPASy TrEMBL
Match: A0A5A7VLE5 (Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00010 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 4.0e-13
Identity = 61/112 (54.46%), Postives = 73/112 (65.18%), Query Frame = 0

Query: 1   MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAAHRIADNGAESS 60
           MAAIK+L+ + LLALL FSESL+TSAA      NS +GML RN+LQTA H IAD      
Sbjct: 1   MAAIKSLLFISLLALLFFSESLSTSAADCRGASNSVTGMLRRNVLQTATHEIAD------ 60

Query: 61  SGGKINVHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAANRSRVAFFGVGSL 113
           S GK+NVHIK+G G R R +      T     G R SAA+RS+VA FG+G L
Sbjct: 61  SEGKMNVHIKRGGGGRIRPVAAGTGFT-----GNRKSAASRSQVASFGLGFL 101

BLAST of Moc09g07480 vs. ExPASy TrEMBL
Match: A0A0A0KAQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394060 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.0e-12
Identity = 64/112 (57.14%), Postives = 72/112 (64.29%), Query Frame = 0

Query: 1   MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAAHRIADNGAESS 60
           MAAIK+L+ + LLALL FSESL+TSAA      NS + ML RNILQTA H IAD      
Sbjct: 1   MAAIKSLISISLLALLFFSESLSTSAANCRGASNSVTAMLRRNILQTATHEIAD------ 60

Query: 61  SGGKINVHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAANRSRVAFFGVGSL 113
           S GK+NV IKKG   R R I G  T T     G R+SAANRSRV  FG+G L
Sbjct: 61  SEGKMNVRIKKGGLGRFRPI-GAGTGT-----GTRSSAANRSRVDSFGLGFL 100

BLAST of Moc09g07480 vs. ExPASy TrEMBL
Match: A0A5D3D3Y6 (E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001920 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.0e-05
Identity = 53/113 (46.90%), Postives = 62/113 (54.87%), Query Frame = 0

Query: 1   MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAAHRIADNGAESS 60
           MAAI+ LV + LLALL FSESL TS        +S +G+  RNIL T AHRI +   ESS
Sbjct: 1   MAAIRPLVSIALLALLFFSESLLTS--------HSLTGIPHRNILHTVAHRIVNGSVESS 60

Query: 61  SGGKIN-VHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAANRSRVAFFGVGSL 113
              K N +H K     RP +I G      K       SA NRSRVA F VGS+
Sbjct: 61  YQRKSNKLHTKDRRRIRPILISGSNGMHHK-------SAENRSRVASFEVGSM 98

BLAST of Moc09g07480 vs. ExPASy TrEMBL
Match: A0A1S3BRF6 (protein no-on-transient A-like OS=Cucumis melo OX=3656 GN=LOC103492900 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.2e-04
Identity = 57/134 (42.54%), Postives = 66/134 (49.25%), Query Frame = 0

Query: 1   MAAIKALVPLLLLALLLFSESL-ATSAAAHGEPWNSPSGMLCRNILQTAAHRIADNGAES 60
           MAAIK  + + LLALL F E L        G   NS +G+L R ILQTAAH+ A +  ES
Sbjct: 1   MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES 60

Query: 61  SSGGKI-NVHIKKGI--------------GSRPRVIPGRRTPTVKRI------PGRRTSA 113
           SS  K+ NVH+K G               G   R   G R  + KR        G   SA
Sbjct: 61  SSERKMNNVHMKIGTSGGGGGGRGGGGGGGRGGRGGGGGRDRSSKRTNLGGGGTGHHKSA 120

BLAST of Moc09g07480 vs. ExPASy TrEMBL
Match: A0A1S3BT53 (E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo OX=3656 GN=LOC103492883 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 3.4e-04
Identity = 50/108 (46.30%), Postives = 58/108 (53.70%), Query Frame = 0

Query: 1   MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAAHRIADNGAESS 60
           MAAI+ LV + LLALL FSESL TS        +S +G+  RNIL T AHRI +   ESS
Sbjct: 1   MAAIRPLVSIALLALLFFSESLLTS--------HSLTGIPHRNILHTVAHRIVNGSVESS 60

Query: 61  SGGKIN-VHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAANRSRVAFF 108
              K N +H K     RP +I G      K       SA NRSRVA F
Sbjct: 61  YQRKSNKLHTKDRRRIRPILISGSNGMHHK-------SAENRSRVASF 93

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6575859.15.1e-1554.46hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0068047.18.2e-1354.46protein no-on-transient A-like [Cucumis melo var. makuwa] >TYK18081.1 protein no... [more]
KAG6575858.11.8e-1237.38hypothetical protein SDJN03_26497, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN44886.14.1e-1257.14hypothetical protein Csa_015765 [Cucumis sativus][more]
KAG6593163.15.0e-1050.00hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7VLE54.0e-1354.46Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A0A0KAQ72.0e-1257.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394060 PE=4 SV=1[more]
A0A5D3D3Y61.0e-0546.90E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A1S3BRF61.2e-0442.54protein no-on-transient A-like OS=Cucumis melo OX=3656 GN=LOC103492900 PE=4 SV=1[more]
A0A1S3BT533.4e-0446.30E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo OX=3656 GN=LOC103492883 P... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc09g07480.1Moc09g07480.1mRNA