Moc09g04530 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc09g04530
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGAG1At protein
Locationchr9: 3470039 .. 3471254 (+)
RNA-Seq ExpressionMoc09g04530
SyntenyMoc09g04530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCGGCGAGGGCAAAATCGGCGGTGCCAGTGGAGGAGGAGGAGCTGGTTTTAGATCGAGAATGGAGCACTTCTTGTACAGCGGCGACAAAAAGCACGTCGCGGCCGGCATCGCCGTCATTAGCATAATTTTCGGCATCCCTTGGGTCCTCATGAGTCGAGGTTCGTTATTTGTTTCCTTCACTAACTTTTGTATCTGTTACTCGACCTTTGTTTCTGGCTATACGTGGGAAAACGAAAACAGAACTGAAGTTTTCAAGTCATCGTTTTTGTTTTCTCGAGAATTGGAGAAGTGAAACCCTCTGTTGATTTTGCAATAAGAAGATTTCAGTTCTTGAATGGAGTTATATTCTAAACTTACTTCTTAATTTGGATTGCAATAGTGGACGTTTGGAAGTATGTTCACGTTTTCCAAGTGTAATTTTAGGGATTCAGAATCTAGGCAGTTTCAATAGGCTACGCGTATGCTTAATCTTGTTTGCCTCATGGCACTGACTGGGTTAGGTTTTGGAAATTGTAGGTTTCTCTGATTGGGTGCTCCTGTAATTTGGATTGAGAAACGGTAGCATATCAGGGCAATATCATTAAGGATTTTGATACTGATTTTTCAAACTTCAGAAAGCTTCCTCATAGAAGTAAAAAAAAGTGATGCCTTGGCGCTCTATGGGAGGTGCTTTACAACAACCTATTTGGGTGATCATGTCTTTAAAAAGTTGTTTCTCAGTTCACTTCTAGTTCGTTTTTGGTGGACTTGTTTTTAGCTCAATTGAAGCTCTTCTTTCTGATAGAATTATAGGTTAGGCTCTTGAATAGCAATTTCAGTAGAAGTCACCCAAAATACCTCTTAAAAATGGTTTGGGAATCATAGTATGAGAACTATCTTTCAGACCCCCTACTCAAGTAAAACTATTACAACTGTTCGTTTTTAGTGTTCGGATCTACACCCAATAGATCTATTTGCCTTTACCCTTATATATATATATATATATATATATATATATATATATATATATTTATAAACAATGTGGTTCAATAGTTCTAAGTCTTTATTTGAATTGGATACGACTTCTAGGAGGTTGTAAATCTAAATGACGTATCGGTCTCACCCTTTAATTGTTTACAGGATCAAAACATCAGTCTCATCAAGATTACATGGAAAGAGCTGACAAAGCACGAAGCCAGAGACTCTCTTCAGGTTCATCTCAAGCTAAATGA

mRNA sequence

ATGGGCGGCGAGGGCAAAATCGGCGGTGCCAGTGGAGGAGGAGGAGCTGGTTTTAGATCGAGAATGGAGCACTTCTTGTACAGCGGCGACAAAAAGCACGTCGCGGCCGGCATCGCCGTCATTAGCATAATTTTCGGCATCCCTTGGGTCCTCATGAGTCGAGGATCAAAACATCAGTCTCATCAAGATTACATGGAAAGAGCTGACAAAGCACGAAGCCAGAGACTCTCTTCAGGTTCATCTCAAGCTAAATGA

Coding sequence (CDS)

ATGGGCGGCGAGGGCAAAATCGGCGGTGCCAGTGGAGGAGGAGGAGCTGGTTTTAGATCGAGAATGGAGCACTTCTTGTACAGCGGCGACAAAAAGCACGTCGCGGCCGGCATCGCCGTCATTAGCATAATTTTCGGCATCCCTTGGGTCCTCATGAGTCGAGGATCAAAACATCAGTCTCATCAAGATTACATGGAAAGAGCTGACAAAGCACGAAGCCAGAGACTCTCTTCAGGTTCATCTCAAGCTAAATGA

Protein sequence

MGGEGKIGGASGGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSRGSKHQSHQDYMERADKARSQRLSSGSSQAK
Homology
BLAST of Moc09g04530 vs. NCBI nr
Match: XP_022150938.1 (uncharacterized protein LOC111018966 [Momordica charantia])

HSP 1 Score: 154.8 bits (390), Expect = 3.2e-34
Identity = 84/90 (93.33%), Postives = 84/90 (93.33%), Query Frame = 0

Query: 1  MGGEGKIGGAS------GGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSR 60
          MGGEGKIGGAS      GGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSR
Sbjct: 1  MGGEGKIGGASGGGGGGGGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSR 60

Query: 61 GSKHQSHQDYMERADKARSQRLSSGSSQAK 85
          GSKHQSHQDYMERADKARSQRLSSGSSQAK
Sbjct: 61 GSKHQSHQDYMERADKARSQRLSSGSSQAK 90

BLAST of Moc09g04530 vs. NCBI nr
Match: XP_022953259.1 (uncharacterized protein LOC111455862 [Cucurbita moschata] >XP_023547796.1 uncharacterized protein LOC111806650 [Cucurbita pepo subsp. pepo] >KAG6575633.1 hypothetical protein SDJN03_26272, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014187.1 hypothetical protein SDJN02_24361 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 134.4 bits (337), Expect = 4.5e-28
Identity = 71/84 (84.52%), Postives = 75/84 (89.29%), Query Frame = 0

Query: 1  MGGEGKIGGASGGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSRGSKHQS 60
          M GE K GG+ GGGG GFRSRMEH+LYSG+KKHVAAGI VI IIFGIPW LM+RGSKHQS
Sbjct: 1  MSGEAKSGGSIGGGG-GFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGSKHQS 60

Query: 61 HQDYMERADKARSQRLSSGSSQAK 85
          HQDYMERADKARSQRLSSGSS AK
Sbjct: 61 HQDYMERADKARSQRLSSGSSSAK 83

BLAST of Moc09g04530 vs. NCBI nr
Match: XP_004135879.1 (uncharacterized protein LOC101214375 [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 7.6e-28
Identity = 70/84 (83.33%), Postives = 74/84 (88.10%), Query Frame = 0

Query: 1  MGGEGKIGGASGGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSRGSKHQS 60
          M GE K GGASGG G GFRSRMEH+LYSGDKKHVAAGI +  IIFGIPW LM+RGSKH+S
Sbjct: 1  MSGEAKSGGASGGAG-GFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKHRS 60

Query: 61 HQDYMERADKARSQRLSSGSSQAK 85
          HQDYMERADKARSQRLSSGSS AK
Sbjct: 61 HQDYMERADKARSQRLSSGSSSAK 83

BLAST of Moc09g04530 vs. NCBI nr
Match: XP_022992483.1 (uncharacterized protein LOC111488802 [Cucurbita maxima])

HSP 1 Score: 133.3 bits (334), Expect = 1.0e-27
Identity = 70/84 (83.33%), Postives = 75/84 (89.29%), Query Frame = 0

Query: 1  MGGEGKIGGASGGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSRGSKHQS 60
          M G+ K GG+ GGGG GFRSRMEH+LYSG+KKHVAAGI VI IIFGIPW LM+RGSKHQS
Sbjct: 1  MSGDAKSGGSIGGGG-GFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGSKHQS 60

Query: 61 HQDYMERADKARSQRLSSGSSQAK 85
          HQDYMERADKARSQRLSSGSS AK
Sbjct: 61 HQDYMERADKARSQRLSSGSSSAK 83

BLAST of Moc09g04530 vs. NCBI nr
Match: XP_008461185.1 (PREDICTED: uncharacterized protein LOC103499845 [Cucumis melo] >KAA0058705.1 hypothetical protein E6C27_scaffold339G001750 [Cucumis melo var. makuwa] >TYK10511.1 hypothetical protein E5676_scaffold459G001610 [Cucumis melo var. makuwa])

HSP 1 Score: 132.9 bits (333), Expect = 1.3e-27
Identity = 70/84 (83.33%), Postives = 74/84 (88.10%), Query Frame = 0

Query: 1  MGGEGKIGGASGGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSRGSKHQS 60
          M GE K GGASGG G GFRSRME++LYSGDKKHVAAGI +  IIFGIPW LM+RGSKHQS
Sbjct: 1  MSGEAKSGGASGGAG-GFRSRMEYYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKHQS 60

Query: 61 HQDYMERADKARSQRLSSGSSQAK 85
          HQDYMERADKARSQRLSSGSS AK
Sbjct: 61 HQDYMERADKARSQRLSSGSSSAK 83

BLAST of Moc09g04530 vs. ExPASy TrEMBL
Match: A0A6J1DAT5 (uncharacterized protein LOC111018966 OS=Momordica charantia OX=3673 GN=LOC111018966 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.6e-34
Identity = 84/90 (93.33%), Postives = 84/90 (93.33%), Query Frame = 0

Query: 1  MGGEGKIGGAS------GGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSR 60
          MGGEGKIGGAS      GGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSR
Sbjct: 1  MGGEGKIGGASGGGGGGGGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSR 60

Query: 61 GSKHQSHQDYMERADKARSQRLSSGSSQAK 85
          GSKHQSHQDYMERADKARSQRLSSGSSQAK
Sbjct: 61 GSKHQSHQDYMERADKARSQRLSSGSSQAK 90

BLAST of Moc09g04530 vs. ExPASy TrEMBL
Match: A0A6J1GP50 (uncharacterized protein LOC111455862 OS=Cucurbita moschata OX=3662 GN=LOC111455862 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.2e-28
Identity = 71/84 (84.52%), Postives = 75/84 (89.29%), Query Frame = 0

Query: 1  MGGEGKIGGASGGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSRGSKHQS 60
          M GE K GG+ GGGG GFRSRMEH+LYSG+KKHVAAGI VI IIFGIPW LM+RGSKHQS
Sbjct: 1  MSGEAKSGGSIGGGG-GFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGSKHQS 60

Query: 61 HQDYMERADKARSQRLSSGSSQAK 85
          HQDYMERADKARSQRLSSGSS AK
Sbjct: 61 HQDYMERADKARSQRLSSGSSSAK 83

BLAST of Moc09g04530 vs. ExPASy TrEMBL
Match: A0A6J1JZC0 (uncharacterized protein LOC111488802 OS=Cucurbita maxima OX=3661 GN=LOC111488802 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.8e-28
Identity = 70/84 (83.33%), Postives = 75/84 (89.29%), Query Frame = 0

Query: 1  MGGEGKIGGASGGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSRGSKHQS 60
          M G+ K GG+ GGGG GFRSRMEH+LYSG+KKHVAAGI VI IIFGIPW LM+RGSKHQS
Sbjct: 1  MSGDAKSGGSIGGGG-GFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGSKHQS 60

Query: 61 HQDYMERADKARSQRLSSGSSQAK 85
          HQDYMERADKARSQRLSSGSS AK
Sbjct: 61 HQDYMERADKARSQRLSSGSSSAK 83

BLAST of Moc09g04530 vs. ExPASy TrEMBL
Match: A0A5D3CFG0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001610 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 6.3e-28
Identity = 70/84 (83.33%), Postives = 74/84 (88.10%), Query Frame = 0

Query: 1  MGGEGKIGGASGGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSRGSKHQS 60
          M GE K GGASGG G GFRSRME++LYSGDKKHVAAGI +  IIFGIPW LM+RGSKHQS
Sbjct: 1  MSGEAKSGGASGGAG-GFRSRMEYYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKHQS 60

Query: 61 HQDYMERADKARSQRLSSGSSQAK 85
          HQDYMERADKARSQRLSSGSS AK
Sbjct: 61 HQDYMERADKARSQRLSSGSSSAK 83

BLAST of Moc09g04530 vs. ExPASy TrEMBL
Match: A0A1S3CEK3 (uncharacterized protein LOC103499845 OS=Cucumis melo OX=3656 GN=LOC103499845 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 6.3e-28
Identity = 70/84 (83.33%), Postives = 74/84 (88.10%), Query Frame = 0

Query: 1  MGGEGKIGGASGGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSRGSKHQS 60
          M GE K GGASGG G GFRSRME++LYSGDKKHVAAGI +  IIFGIPW LM+RGSKHQS
Sbjct: 1  MSGEAKSGGASGGAG-GFRSRMEYYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKHQS 60

Query: 61 HQDYMERADKARSQRLSSGSSQAK 85
          HQDYMERADKARSQRLSSGSS AK
Sbjct: 61 HQDYMERADKARSQRLSSGSSSAK 83

BLAST of Moc09g04530 vs. TAIR 10
Match: AT1G16000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80890.1); Has 41 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 108.2 bits (269), Expect = 3.2e-24
Identity = 55/86 (63.95%), Postives = 68/86 (79.07%), Query Frame = 0

Query: 1  MGGEGKIGG--ASGGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSRGSKH 60
          MG E K  G  AS  GG GFR++MEH++YSG+KKHV  GI +++IIFG+PW LM++GSKH
Sbjct: 1  MGNETKTNGGPASMAGGGGFRAKMEHYVYSGEKKHVLVGIGIVTIIFGVPWYLMTQGSKH 60

Query: 61 QSHQDYMERADKARSQRLSSGSSQAK 85
          QSHQDYM++ADKAR  RLSS SS  K
Sbjct: 61 QSHQDYMDKADKARKARLSSSSSANK 86

BLAST of Moc09g04530 vs. TAIR 10
Match: AT1G80890.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16000.1); Has 41 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 105.5 bits (262), Expect = 2.1e-23
Identity = 55/84 (65.48%), Postives = 66/84 (78.57%), Query Frame = 0

Query: 1  MGGEGKIGGASGGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSRGSKHQS 60
          MG E K    S  GG G R++MEH++YSG+KKHV AGI +ISIIFGIPW LM++GSKH+S
Sbjct: 1  MGNESK----SNLGGGGIRAKMEHYVYSGEKKHVLAGIGIISIIFGIPWYLMNQGSKHRS 60

Query: 61 HQDYMERADKARSQRLSSGSSQAK 85
          HQDY+E+ADKAR  RLSS SS  K
Sbjct: 61 HQDYLEKADKARKARLSSSSSSDK 80

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022150938.13.2e-3493.33uncharacterized protein LOC111018966 [Momordica charantia][more]
XP_022953259.14.5e-2884.52uncharacterized protein LOC111455862 [Cucurbita moschata] >XP_023547796.1 unchar... [more]
XP_004135879.17.6e-2883.33uncharacterized protein LOC101214375 [Cucumis sativus][more]
XP_022992483.11.0e-2783.33uncharacterized protein LOC111488802 [Cucurbita maxima][more]
XP_008461185.11.3e-2783.33PREDICTED: uncharacterized protein LOC103499845 [Cucumis melo] >KAA0058705.1 hyp... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DAT51.6e-3493.33uncharacterized protein LOC111018966 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1GP502.2e-2884.52uncharacterized protein LOC111455862 OS=Cucurbita moschata OX=3662 GN=LOC1114558... [more]
A0A6J1JZC04.8e-2883.33uncharacterized protein LOC111488802 OS=Cucurbita maxima OX=3661 GN=LOC111488802... [more]
A0A5D3CFG06.3e-2883.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CEK36.3e-2883.33uncharacterized protein LOC103499845 OS=Cucumis melo OX=3656 GN=LOC103499845 PE=... [more]
Match NameE-valueIdentityDescription
AT1G16000.13.2e-2463.95unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G80890.12.1e-2365.48unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..73
NoneNo IPR availablePANTHERPTHR35990GAG1AT PROTEINcoord: 1..83

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc09g04530.1Moc09g04530.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane