Moc09g02620 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g02620
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr9: 2112977 .. 2113946 (+)
RNA-Seq Expression	Moc09g02620
Synteny	Moc09g02620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCCCTAAATTCTCTCTGAGCTCCATTTTCGTGACGGTTCTTGTCTTCACCATGGTTCTCTCTCCCATGATCTCCACCGCTGCCGCCACTCGTTTGCCTCTCCAAGGTAAAAAATTGTCAAATCACTGTTATACCCAAAAACTTTGGTTTTCGAGTAAAATATTAATTCGAGATCCAACGATGTAAAAGAGGAAAGAAATCAAGGAGAGTAGAGCTAGAAATTTTCTTAGAAGGGGCATGTTTAAATACTATTTTAATTTATTATCGTCTTTCTACTTTTAAAATGTTCCATTTGATTTTTGTATTTTTAATTTTTTTTCATTTTAGTTCCTATACACTTTCAAAATACTCATACTCATTTTGGTTTTTATACTTTTGAAAAGGAACTATTTTGATCTTTGTACTTCATCTTTTATCTCATTTTTTAATCACGAATATTTCAACGTGACACTAATATTCAATAAATTTATTAAAATGTTCGAATAACTTTAGATTAAATGGTCTCCATTGTGTATAAATTTTGTGTTGAAATATTATGCAAAACCAAAATGTTCCCTTCTTTAAAATTAGGACCAAAATTTATATTTTTAAAGTAGAAGGATTAAAATGAACAAAAGTTGAAAATACAAATATCAAAAGTTTTGAAAGTAAAAGAAGTTTAAACCATAACTAAAAGTACAGAAATCGAAATAGTATTTTCGGTTAAATAAATGATATTGCATACCTTTCACTTACTAGTGGAGTTTAAGGGATATTATCATATTAGTTTAGAGCACATTTAAATTTAATCGTTTATGTGTTTAAGAAATTTTACGATTAAACTTTTGGGTTCGGTGATGATGCAGTTAGAAGGCCACCGATATGCCCGGCCTGTGTGTGCTGCAAGCCGCCTCCGCCGGGCTCTTGCTGCAAGCAATGCTGTGCTACACCTATTGAAACTTCGTCTCAAAATGGATCGCCATGA

mRNA sequence

ATGGCTGCCCCTAAATTCTCTCTGAGCTCCATTTTCGTGACGGTTCTTGTCTTCACCATGGTTCTCTCTCCCATGATCTCCACCGCTGCCGCCACTCGTTTGCCTCTCCAAGTTAGAAGGCCACCGATATGCCCGGCCTGTGTGTGCTGCAAGCCGCCTCCGCCGGGCTCTTGCTGCAAGCAATGCTGTGCTACACCTATTGAAACTTCGTCTCAAAATGGATCGCCATGA

Coding sequence (CDS)

ATGGCTGCCCCTAAATTCTCTCTGAGCTCCATTTTCGTGACGGTTCTTGTCTTCACCATGGTTCTCTCTCCCATGATCTCCACCGCTGCCGCCACTCGTTTGCCTCTCCAAGTTAGAAGGCCACCGATATGCCCGGCCTGTGTGTGCTGCAAGCCGCCTCCGCCGGGCTCTTGCTGCAAGCAATGCTGTGCTACACCTATTGAAACTTCGTCTCAAAATGGATCGCCATGA

Protein sequence

MAAPKFSLSSIFVTVLVFTMVLSPMISTAAATRLPLQVRRPPICPACVCCKPPPPGSCCKQCCATPIETSSQNGSP

Homology

[Close]

BLAST of Moc09g02620 vs. NCBI nr
Match: XP_022144128.1 (uncharacterized protein LOC111013890 [Momordica charantia])

HSP 1 Score: 149.1 bits (375), Expect = 1.6e-32
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MAAPKFSLSSIFVTVLVFTMVLSPMISTAAATRLPLQVRRPPICPACVCCKPPPPGSCCK 60
          MAAPKFSLSSIFVTVLVFTMVLSPMISTAAATRLPLQVRRPPICPACVCCKPPPPGSCCK
Sbjct: 5  MAAPKFSLSSIFVTVLVFTMVLSPMISTAAATRLPLQVRRPPICPACVCCKPPPPGSCCK 64

Query: 61 QCCATPIETSSQNGSP 77
          QCCATPIETSSQNGSP
Sbjct: 65 QCCATPIETSSQNGSP 80

[Close]

BLAST of Moc09g02620 vs. NCBI nr
Match: KGN45568.1 (hypothetical protein Csa_016454 [Cucumis sativus])

HSP 1 Score: 102.8 bits (255), Expect = 1.3e-18
Identity = 56/78 (71.79%), Postives = 67/78 (85.90%), Query Frame = 0


Query: 1  MAAPKFSLSSIFVTVLVFTMVLSPMIS-TAAATRLPL-QVRRPPICPACVCCKPPPPGSC 60
          MA PK  L+S+F+TVLVF MVLSPM + TA+ATR+ L Q+ RPPICPACVCC+PPP GSC
Sbjct: 1  MAIPKLPLTSVFITVLVFAMVLSPMTTPTASATRVLLQQINRPPICPACVCCEPPPAGSC 60

Query: 61 CKQCCATPIETSSQNGSP 77
          C+ CCA+PI+TSSQNGSP
Sbjct: 61 CR-CCASPIQTSSQNGSP 77

[Close]

BLAST of Moc09g02620 vs. NCBI nr
Match: XP_038896231.1 (uncharacterized protein LOC120084509 [Benincasa hispida])

HSP 1 Score: 100.5 bits (249), Expect = 6.5e-18
Identity = 57/78 (73.08%), Postives = 67/78 (85.90%), Query Frame = 0


Query: 1  MAAPKFSLSSIFVTVLVFTMVLSPM-ISTAAATRLPL-QVRRPPICPACVCCKPPPPGSC 60
          MA+ KFSL+S+ +TVLVFTMVLSPM I TA ATR+ L Q+ RPPICPACVCC+P P GSC
Sbjct: 1  MASAKFSLTSVLMTVLVFTMVLSPMTIPTANATRVLLQQINRPPICPACVCCEPAPAGSC 60

Query: 61 CKQCCATPIETSSQNGSP 77
          C+ CCA+PI+TSSQNGSP
Sbjct: 61 CR-CCASPIQTSSQNGSP 77

[Close]

BLAST of Moc09g02620 vs. NCBI nr
Match: XP_022992462.1 (uncharacterized protein LOC111488758 [Cucurbita maxima])

HSP 1 Score: 96.7 bits (239), Expect = 9.4e-17
Identity = 58/73 (79.45%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 6  FSLSSIFVTVLVFTMVLSPM-ISTAAATRLPL-QVRRPPICPACVCCKPPPPGSCCKQCC 65
          FS  SIFVTVLVF MVLSPM ISTA ATR  L QV RPPICPACVCC+P P GSCC+ CC
Sbjct: 7  FSPISIFVTVLVFAMVLSPMTISTANATRALLQQVNRPPICPACVCCEPAPAGSCCR-CC 66

Query: 66 ATPIETSSQNGSP 77
          ATPI+TSSQNGSP
Sbjct: 67 ATPIQTSSQNGSP 78

[Close]

BLAST of Moc09g02620 vs. NCBI nr
Match: KAA0059464.1 (hypothetical protein E6C27_scaffold242G001940 [Cucumis melo var. makuwa] >TYK03859.1 hypothetical protein E5676_scaffold347G00530 [Cucumis melo var. makuwa])

HSP 1 Score: 96.3 bits (238), Expect = 1.2e-16
Identity = 54/78 (69.23%), Postives = 65/78 (83.33%), Query Frame = 0


Query: 1  MAAPKFSLSSIFVTVLVFTMVLSPM-ISTAAATRLPL-QVRRPPICPACVCCKPPPPGSC 60
          MA PK  ++S+F+TVLVF M+LSPM I TA ATR+ L Q+ RPPICPACVCC+P P GSC
Sbjct: 1  MAIPKSPITSVFMTVLVFAMLLSPMTIPTATATRVLLQQLNRPPICPACVCCEPAPAGSC 60

Query: 61 CKQCCATPIETSSQNGSP 77
          C+ CCA+PI+TSSQNGSP
Sbjct: 61 CR-CCASPIQTSSQNGSP 77

[Close]

BLAST of Moc09g02620 vs. ExPASy TrEMBL
Match: A0A6J1CSH3 (uncharacterized protein LOC111013890 OS=Momordica charantia OX=3673 GN=LOC111013890 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 7.7e-33
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MAAPKFSLSSIFVTVLVFTMVLSPMISTAAATRLPLQVRRPPICPACVCCKPPPPGSCCK 60
          MAAPKFSLSSIFVTVLVFTMVLSPMISTAAATRLPLQVRRPPICPACVCCKPPPPGSCCK
Sbjct: 5  MAAPKFSLSSIFVTVLVFTMVLSPMISTAAATRLPLQVRRPPICPACVCCKPPPPGSCCK 64

Query: 61 QCCATPIETSSQNGSP 77
          QCCATPIETSSQNGSP
Sbjct: 65 QCCATPIETSSQNGSP 80

[Close]

BLAST of Moc09g02620 vs. ExPASy TrEMBL
Match: A0A0A0K7Y9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452230 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.3e-19
Identity = 56/78 (71.79%), Postives = 67/78 (85.90%), Query Frame = 0


Query: 1  MAAPKFSLSSIFVTVLVFTMVLSPMIS-TAAATRLPL-QVRRPPICPACVCCKPPPPGSC 60
          MA PK  L+S+F+TVLVF MVLSPM + TA+ATR+ L Q+ RPPICPACVCC+PPP GSC
Sbjct: 1  MAIPKLPLTSVFITVLVFAMVLSPMTTPTASATRVLLQQINRPPICPACVCCEPPPAGSC 60

Query: 61 CKQCCATPIETSSQNGSP 77
          C+ CCA+PI+TSSQNGSP
Sbjct: 61 CR-CCASPIQTSSQNGSP 77

[Close]

BLAST of Moc09g02620 vs. ExPASy TrEMBL
Match: A0A6J1JPW7 (uncharacterized protein LOC111488758 OS=Cucurbita maxima OX=3661 GN=LOC111488758 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 4.5e-17
Identity = 58/73 (79.45%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 6  FSLSSIFVTVLVFTMVLSPM-ISTAAATRLPL-QVRRPPICPACVCCKPPPPGSCCKQCC 65
          FS  SIFVTVLVF MVLSPM ISTA ATR  L QV RPPICPACVCC+P P GSCC+ CC
Sbjct: 7  FSPISIFVTVLVFAMVLSPMTISTANATRALLQQVNRPPICPACVCCEPAPAGSCCR-CC 66

Query: 66 ATPIETSSQNGSP 77
          ATPI+TSSQNGSP
Sbjct: 67 ATPIQTSSQNGSP 78

[Close]

BLAST of Moc09g02620 vs. ExPASy TrEMBL
Match: A0A5A7UWJ7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00530 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 5.9e-17
Identity = 54/78 (69.23%), Postives = 65/78 (83.33%), Query Frame = 0


Query: 1  MAAPKFSLSSIFVTVLVFTMVLSPM-ISTAAATRLPL-QVRRPPICPACVCCKPPPPGSC 60
          MA PK  ++S+F+TVLVF M+LSPM I TA ATR+ L Q+ RPPICPACVCC+P P GSC
Sbjct: 1  MAIPKSPITSVFMTVLVFAMLLSPMTIPTATATRVLLQQLNRPPICPACVCCEPAPAGSC 60

Query: 61 CKQCCATPIETSSQNGSP 77
          C+ CCA+PI+TSSQNGSP
Sbjct: 61 CR-CCASPIQTSSQNGSP 77

[Close]

BLAST of Moc09g02620 vs. ExPASy TrEMBL
Match: A0A6J1GR88 (uncharacterized protein LOC111456398 OS=Cucurbita moschata OX=3662 GN=LOC111456398 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.8e-16
Identity = 55/74 (74.32%), Postives = 62/74 (83.78%), Query Frame = 0


Query: 5  KFSLSSIFVTVLVFTMVLSP-MISTAAATRLPL-QVRRPPICPACVCCKPPPPGSCCKQC 64
          KF+ +SIFVTVLVF MVLSP  IST  ATR+ L QV RPPICPACVCC+P P GSCC+ C
Sbjct: 6  KFTPTSIFVTVLVFAMVLSPTTISTVNATRVLLQQVNRPPICPACVCCEPAPAGSCCR-C 65

Query: 65 CATPIETSSQNGSP 77
          CATPI+TSSQ+GSP
Sbjct: 66 CATPIQTSSQSGSP 78

[Close]

BLAST of Moc09g02620 vs. TAIR 10
Match: AT1G51920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; Has 22 Blast hits to 22 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 1.1e-07
Identity = 33/68 (48.53%), Postives = 45/68 (66.18%), Query Frame = 0


Query: 10 SIFVTVLVFTMVLSPMISTAAATRLPLQ--VRRPPICPACVCCKPPPPGSCCKQCCATPI 69
          SIF+ + V  ++L   +S + ATR+P      R PICPACVCC+P P GSCC+ CCA+PI
Sbjct: 9  SIFLKLFVLFLLLVLPLSQSNATRIPRAPISSRRPICPACVCCEPAPLGSCCR-CCASPI 68

Query: 70 ETSSQNGS 76
           T + + S
Sbjct: 69 VTQTHHHS 75

The following BLAST results are available for this feature:

BLAST of Moc09g02620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144128.1	1.6e-32	100.00	uncharacterized protein LOC111013890 [Momordica charantia]	[more]
KGN45568.1	1.3e-18	71.79	hypothetical protein Csa_016454 [Cucumis sativus]	[more]
XP_038896231.1	6.5e-18	73.08	uncharacterized protein LOC120084509 [Benincasa hispida]	[more]
XP_022992462.1	9.4e-17	79.45	uncharacterized protein LOC111488758 [Cucurbita maxima]	[more]
KAA0059464.1	1.2e-16	69.23	hypothetical protein E6C27_scaffold242G001940 [Cucumis melo var. makuwa] >TYK038...	[more]

BLAST of Moc09g02620 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc09g02620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CSH3	7.7e-33	100.00	uncharacterized protein LOC111013890 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A0A0K7Y9	6.3e-19	71.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452230 PE=4 SV=1	[more]
A0A6J1JPW7	4.5e-17	79.45	uncharacterized protein LOC111488758 OS=Cucurbita maxima OX=3661 GN=LOC111488758...	[more]
A0A5A7UWJ7	5.9e-17	69.23	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1GR88	3.8e-16	74.32	uncharacterized protein LOC111456398 OS=Cucurbita moschata OX=3662 GN=LOC1114563...	[more]

BLAST of Moc09g02620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G51920.1	1.1e-07	48.53	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36328	TRANSMEMBRANE PROTEIN	coord: 7..76
None	No IPR available	PANTHER	PTHR36328:SF1	TRANSMEMBRANE PROTEIN	coord: 7..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g02620.1	Moc09g02620.1	mRNA