Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCGAATACTGGCAGGACCTAGTCAGCGGAGACAACACCGCGGCTTGGCAGACCAAATGGGCAATCCACGGGACTTGCTCGGCCACGGTGTTTGACGAGTTCAAGTACTTCTGCATGGGTTTGGATACGTATGGCCGCCATGCTATCCTATCATTTCTGGTGCACGGCGGCCTGGTCCCGAGCTCTGCTCAACTGCACCACAAGACTAGCTTTATCAAAGCCATCGCGGACGTGACCTCGAAAAAGGGCGGCGTCATCTGTGCGGCCGACCAGCGGGGCCGAACACAGCTGAAGATGGTGGTTTTGTGTTATAGTAAAGATGGTGCAACAATGATCGACTGCCCTGATAATGTCAGTAGTTCCTGCCCTGATAAGTTCTTGTGGCTTGCCTTGGGTGATTGA
mRNA sequence
ATGGGCGAATACTGGCAGGACCTAGTCAGCGGAGACAACACCGCGGCTTGGCAGACCAAATGGGCAATCCACGGGACTTGCTCGGCCACGGTGTTTGACGAGTTCAAGTACTTCTGCATGGGTTTGGATACGTATGGCCGCCATGCTATCCTATCATTTCTGGTGCACGGCGGCCTGGTCCCGAGCTCTGCTCAACTGCACCACAAGACTAGCTTTATCAAAGCCATCGCGGACGTGACCTCGAAAAAGGGCGGCGTCATCTGTGCGGCCGACCAGCGGGGCCGAACACAGCTGAAGATGGTGGTTTTGTGTTATAGTAAAGATGGTGCAACAATGATCGACTGCCCTGATAATGTCAGTAGTTCCTGCCCTGATAAGTTCTTGTGGCTTGCCTTGGGTGATTGA
Coding sequence (CDS)
ATGGGCGAATACTGGCAGGACCTAGTCAGCGGAGACAACACCGCGGCTTGGCAGACCAAATGGGCAATCCACGGGACTTGCTCGGCCACGGTGTTTGACGAGTTCAAGTACTTCTGCATGGGTTTGGATACGTATGGCCGCCATGCTATCCTATCATTTCTGGTGCACGGCGGCCTGGTCCCGAGCTCTGCTCAACTGCACCACAAGACTAGCTTTATCAAAGCCATCGCGGACGTGACCTCGAAAAAGGGCGGCGTCATCTGTGCGGCCGACCAGCGGGGCCGAACACAGCTGAAGATGGTGGTTTTGTGTTATAGTAAAGATGGTGCAACAATGATCGACTGCCCTGATAATGTCAGTAGTTCCTGCCCTGATAAGTTCTTGTGGCTTGCCTTGGGTGATTGA
Protein sequence
MGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSAQLHHKTSFIKAIADVTSKKGGVICAADQRGRTQLKMVVLCYSKDGATMIDCPDNVSSSCPDKFLWLALGD
Homology
BLAST of Moc09g00660 vs. NCBI nr
Match:
XP_022143591.1 (ribonuclease 1-like [Momordica charantia])
HSP 1 Score: 288.1 bits (736), Expect = 3.9e-74
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
Query: 1 MGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLV 60
MGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLV
Sbjct: 1 MGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLV 60
Query: 61 PSSAQLHHKTSFIKAIADVTSKKGGVICAADQRGRTQLKMVVLCYSKDGATMIDCPDNVS 120
PSSAQLHHKTSFIKAIADVTSKKGGVICAADQRGRTQLKMVVLCYSKDGATMIDCPDNVS
Sbjct: 61 PSSAQLHHKTSFIKAIADVTSKKGGVICAADQRGRTQLKMVVLCYSKDGATMIDCPDNVS 120
Query: 121 SSCPDKFLWLALGD 135
SSCPDKFLWLALGD
Sbjct: 121 SSCPDKFLWLALGD 134
BLAST of Moc09g00660 vs. NCBI nr
Match:
XP_038899255.1 (ribonuclease MC-like [Benincasa hispida])
HSP 1 Score: 238.4 bits (607), Expect = 3.5e-59
Identity = 107/134 (79.85%), Postives = 120/134 (89.55%), Query Frame = 0
Query: 1 MGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLV 60
M +YWQDL +G+ AW +KWAIHGTCSATVFDEFKYFC+GLDTYGRHA+LSFLVHGGLV
Sbjct: 88 MSQYWQDLENGNPIEAWASKWAIHGTCSATVFDEFKYFCLGLDTYGRHAMLSFLVHGGLV 147
Query: 61 PSSAQLHHKTSFIKAIADVTSKKGGVICAADQRGRTQLKMVVLCYSKDGATMIDCPDNVS 120
PSS++ KTSF+KAIAD+TSKKGGVICA DQRGRTQL+ VLCY+KDG T+IDCPDNVS
Sbjct: 148 PSSSKYLDKTSFVKAIADMTSKKGGVICAVDQRGRTQLQKAVLCYAKDGDTLIDCPDNVS 207
Query: 121 SSCPDKFLWLALGD 135
SSCPD FLWLALGD
Sbjct: 208 SSCPDNFLWLALGD 221
BLAST of Moc09g00660 vs. NCBI nr
Match:
XP_004149779.2 (ribonuclease MC [Cucumis sativus])
HSP 1 Score: 198.4 bits (503), Expect = 4.0e-47
Identity = 90/134 (67.16%), Postives = 105/134 (78.36%), Query Frame = 0
Query: 1 MGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLV 60
M +YW+DL +G++ AW +KW +HGTCSA FD+FKYFC+GLDTYGRHAI SFL GL
Sbjct: 88 MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLA 147
Query: 61 PSSAQLHHKTSFIKAIADVTSKKGGVICAADQRGRTQLKMVVLCYSKDGATMIDCPDNVS 120
PSS++ K SFI AIA+ T KKGGVICA DQ R QL+ VLCY KDG T+IDCPDNVS
Sbjct: 148 PSSSKYVAKASFITAIANSTLKKGGVICAVDQYRRIQLQKAVLCYVKDGHTLIDCPDNVS 207
Query: 121 SSCPDKFLWLALGD 135
SSCPD F+WLALGD
Sbjct: 208 SSCPDNFVWLALGD 221
BLAST of Moc09g00660 vs. NCBI nr
Match:
KGN45018.2 (hypothetical protein Csa_016393 [Cucumis sativus])
HSP 1 Score: 198.4 bits (503), Expect = 4.0e-47
Identity = 90/134 (67.16%), Postives = 105/134 (78.36%), Query Frame = 0
Query: 1 MGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLV 60
M +YW+DL +G++ AW +KW +HGTCSA FD+FKYFC+GLDTYGRHAI SFL GL
Sbjct: 87 MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLA 146
Query: 61 PSSAQLHHKTSFIKAIADVTSKKGGVICAADQRGRTQLKMVVLCYSKDGATMIDCPDNVS 120
PSS++ K SFI AIA+ T KKGGVICA DQ R QL+ VLCY KDG T+IDCPDNVS
Sbjct: 147 PSSSKYVAKASFITAIANSTLKKGGVICAVDQYRRIQLQKAVLCYVKDGHTLIDCPDNVS 206
Query: 121 SSCPDKFLWLALGD 135
SSCPD F+WLALGD
Sbjct: 207 SSCPDNFVWLALGD 220
BLAST of Moc09g00660 vs. NCBI nr
Match:
XP_022934593.1 (ribonuclease MC-like [Cucurbita moschata])
HSP 1 Score: 95.9 bits (237), Expect = 2.8e-16
Identity = 46/133 (34.59%), Postives = 70/133 (52.63%), Query Frame = 0
Query: 1 MGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHA--ILSFLVHGG 60
+ YW D++ G N WQ +W HG CS F++ +YF + L+ H+ +L+ L G
Sbjct: 89 LNTYWPDVIQGKNQQFWQHEWDRHGICSNPPFNQLQYFQITLNIRTNHSYDLLTILNAAG 148
Query: 61 LVPSSAQLHHKTSFIKAIADVTSKKGGVIC--AADQRGRTQLKMVVLCYSKDGATMIDCP 120
L PS + AI T KK G+ C A + + QL ++LC+ KDG T+IDC
Sbjct: 149 LGPSDTNIREYKDIEGAIQAATGKKPGLRCNINAQSKEKKQLLEIILCFDKDGITLIDCT 208
Query: 121 DNVSSSCPDKFLW 130
+ +CP +F+W
Sbjct: 209 EFAGITCPPQFVW 221
BLAST of Moc09g00660 vs. ExPASy Swiss-Prot
Match:
P23540 (Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1)
HSP 1 Score: 64.3 bits (155), Expect = 1.2e-09
Identity = 35/116 (30.17%), Postives = 60/116 (51.72%), Query Frame = 0
Query: 5 WQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSA 64
W +++ +N W +W HGTCS + F++ YF + +D + I+ G L P +A
Sbjct: 70 WPNVLRANNQQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDII-----GALRPHAA 129
Query: 65 QLHHKTSFIKAIADVTSKK----GGVICAADQRGR-TQLKMVVLCYSKDGATMIDC 116
+ +T +AI K G+ C D + + + L VV C+++DG+T+IDC
Sbjct: 130 GPNGRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGSTLIDC 180
BLAST of Moc09g00660 vs. ExPASy Swiss-Prot
Match:
Q7M438 (Ribonuclease DdI OS=Dictyostelium discoideum OX=44689 GN=ddiA PE=1 SV=3)
HSP 1 Score: 61.2 bits (147), Expect = 1.0e-08
Identity = 37/121 (30.58%), Postives = 55/121 (45.45%), Query Frame = 0
Query: 5 WQDLVSGDNTAAWQTKWAIHGTCSAT--VFDEFKYFCMGLDTYGRHAILSFLVHGGLVPS 64
W L +G NT W +++ HGTCS T + D YF G+ Y I + L + PS
Sbjct: 99 WPSL-TGPNTDFWTHEFSKHGTCSITGPITDIHDYFATGIKLYTEFNITAALESENIYPS 158
Query: 65 SAQLHHKTSFIKAIADVTSKKGGVICAADQRGRTQLKMVVLCYSKDGATMIDCPDNVSSS 124
+ + AI K G+ C++ QL V +C K+ +++DCPD S
Sbjct: 159 DSNTYKPVDITNAITTHFGGKPGIQCSSG-----QLSTVAVCIDKNSLSIMDCPDLQGWS 213
BLAST of Moc09g00660 vs. ExPASy TrEMBL
Match:
A0A6J1CQQ9 (ribonuclease 1-like OS=Momordica charantia OX=3673 GN=LOC111013449 PE=3 SV=1)
HSP 1 Score: 288.1 bits (736), Expect = 1.9e-74
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
Query: 1 MGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLV 60
MGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLV
Sbjct: 1 MGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLV 60
Query: 61 PSSAQLHHKTSFIKAIADVTSKKGGVICAADQRGRTQLKMVVLCYSKDGATMIDCPDNVS 120
PSSAQLHHKTSFIKAIADVTSKKGGVICAADQRGRTQLKMVVLCYSKDGATMIDCPDNVS
Sbjct: 61 PSSAQLHHKTSFIKAIADVTSKKGGVICAADQRGRTQLKMVVLCYSKDGATMIDCPDNVS 120
Query: 121 SSCPDKFLWLALGD 135
SSCPDKFLWLALGD
Sbjct: 121 SSCPDKFLWLALGD 134
BLAST of Moc09g00660 vs. ExPASy TrEMBL
Match:
A0A0A0K4L1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G351900 PE=3 SV=1)
HSP 1 Score: 198.4 bits (503), Expect = 2.0e-47
Identity = 90/134 (67.16%), Postives = 105/134 (78.36%), Query Frame = 0
Query: 1 MGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLV 60
M +YW+DL +G++ AW +KW +HGTCSA FD+FKYFC+GLDTYGRHAI SFL GL
Sbjct: 1 MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLA 60
Query: 61 PSSAQLHHKTSFIKAIADVTSKKGGVICAADQRGRTQLKMVVLCYSKDGATMIDCPDNVS 120
PSS++ K SFI AIA+ T KKGGVICA DQ R QL+ VLCY KDG T+IDCPDNVS
Sbjct: 61 PSSSKYVAKASFITAIANSTLKKGGVICAVDQYRRIQLQKAVLCYVKDGHTLIDCPDNVS 120
Query: 121 SSCPDKFLWLALGD 135
SSCPD F+WLALGD
Sbjct: 121 SSCPDNFVWLALGD 134
BLAST of Moc09g00660 vs. ExPASy TrEMBL
Match:
A0A6J1F837 (Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111441728 PE=3 SV=1)
HSP 1 Score: 95.9 bits (237), Expect = 1.4e-16
Identity = 46/133 (34.59%), Postives = 70/133 (52.63%), Query Frame = 0
Query: 1 MGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHA--ILSFLVHGG 60
+ YW D++ G N WQ +W HG CS F++ +YF + L+ H+ +L+ L G
Sbjct: 89 LNTYWPDVIQGKNQQFWQHEWDRHGICSNPPFNQLQYFQITLNIRTNHSYDLLTILNAAG 148
Query: 61 LVPSSAQLHHKTSFIKAIADVTSKKGGVIC--AADQRGRTQLKMVVLCYSKDGATMIDCP 120
L PS + AI T KK G+ C A + + QL ++LC+ KDG T+IDC
Sbjct: 149 LGPSDTNIREYKDIEGAIQAATGKKPGLRCNINAQSKEKKQLLEIILCFDKDGITLIDCT 208
Query: 121 DNVSSSCPDKFLW 130
+ +CP +F+W
Sbjct: 209 EFAGITCPPQFVW 221
BLAST of Moc09g00660 vs. ExPASy TrEMBL
Match:
A0A6J1EXD5 (Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111439251 PE=3 SV=1)
HSP 1 Score: 95.1 bits (235), Expect = 2.3e-16
Identity = 45/133 (33.83%), Postives = 73/133 (54.89%), Query Frame = 0
Query: 1 MGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYF--CMGLDTYGRHAILSFLVHGG 60
+ YW D++SG+N W+ +W HGTCS F++ +YF + + T + +L+ L G
Sbjct: 85 LNTYWPDVISGNNQRFWKHEWDSHGTCSDPPFNQLQYFQTTLNIRTNHNYDLLAILNTAG 144
Query: 61 LVPSSAQLHHKTSFIKAIADVTSKKGGVICAAD-QRGRTQLKMVVLCYSKDGATMIDCPD 120
L P++ + AI T KK G+ C + Q + QL ++LC+ K+G T+IDC
Sbjct: 145 LGPTATNTRQYGAIEGAIQAATGKKPGLRCNKNAQSKKKQLFEIILCFDKNGVTLIDCTQ 204
Query: 121 NVSSSCPDKFLWL 131
+CP +F+WL
Sbjct: 205 FAGITCPSQFVWL 217
BLAST of Moc09g00660 vs. ExPASy TrEMBL
Match:
A0A0A0LAN6 (Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_3G745530 PE=3 SV=1)
HSP 1 Score: 94.0 bits (232), Expect = 5.2e-16
Identity = 47/126 (37.30%), Postives = 69/126 (54.76%), Query Frame = 0
Query: 5 WQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLVPSSA 64
W DL G+N W +W HG CS F F+YF + L+ + +L+ L GL P ++
Sbjct: 91 WPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILKAAGLNPQTS 150
Query: 65 QLHHKTSFIKAIADVTSKKGGVICAAD-QRGRTQLKMVVLCYSKDGATMIDCPDNVSSSC 124
Q + + I T K G+ C + + G++QL +VLC KDGAT+IDCP VS++C
Sbjct: 151 QNLAIQNIMAPIQRTTKKYPGIRCNKNVKTGKSQLNEIVLCLEKDGATLIDCPTFVSNTC 210
Query: 125 PDKFLW 130
F+W
Sbjct: 211 AKSFVW 216
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P23540 | 1.2e-09 | 30.17 | Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1 | [more] |
Q7M438 | 1.0e-08 | 30.58 | Ribonuclease DdI OS=Dictyostelium discoideum OX=44689 GN=ddiA PE=1 SV=3 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CQQ9 | 1.9e-74 | 100.00 | ribonuclease 1-like OS=Momordica charantia OX=3673 GN=LOC111013449 PE=3 SV=1 | [more] |
A0A0A0K4L1 | 2.0e-47 | 67.16 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G351900 PE=3 SV=1 | [more] |
A0A6J1F837 | 1.4e-16 | 34.59 | Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111441728 PE=3 SV=1 | [more] |
A0A6J1EXD5 | 2.3e-16 | 33.83 | Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111439251 PE=3 SV=1 | [more] |
A0A0A0LAN6 | 5.2e-16 | 37.30 | Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_3G745530 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |