Moc08g45890 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g45890
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	40S ribosomal S3-like protein
Location	chr8: 35149212 .. 35151572 (-)
RNA-Seq Expression	Moc08g45890
Synteny	Moc08g45890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGACTCAGATGAGTAAGAAGAGAAAGGTCAGTCCACGAAATTCCTTAATCTGTACTGTTTTCCTGACCATCTCTACAACGGTTGATCTGTTCTGTTTTGTATTGGTTATATTTTCTGTTCGATTTTGTTGCAGTTCGTAGCCGATGGAGTATTTTTTGCCGAGTTAAACGAGGTTCTGACCAGAGAGTTGGCTGAGGATGGATACTCCGGAGTTGAGGTTAGAGTAACTCCTATGCGCACCGAGATCATCATCCGAGCCACCCGCACCCAAAACGTTCTCGGTCAGTTTTCATCGATTTCGAAATTCAATTGATTAAACAGCTTTACTTTGTGCTCCATGCTCCAATAGATTGAACGTCTTAGGTTAACAGTTATCGATATTATTTGGCAATTTTCTTAGAAAATTTTATTTGGTAATATAGGAGAAAAGGGCAGGAGAATTAGGGAACTGACCTCGGTTGTGCAGAAGCGGTTCAAGTTTCCGGAGAACAGTGTTGAGCTTTATGCCGAGAAAGTTAACAACAGAGGGCTTTGCGCCATTGCCCAAGCCGAATCTCTTCGCTATAAGCTACTTGGTGGCCTTGCTGTTCGGAGGTACTTTGTTTTTCTCTTTTCATTCCCCGTATTATTATGTTATTATTTTATTGATTCTGACTTGCAAATTGAACTACGATTTATGATTGTGAAGGAATACAGATCACATATTCATTATCATACTGCGTATAGCTCTGATACATAGTGTTAGTTTGTGGTATTTGATTCCACATCTCATTGAAGGGAAATGACTCCGTTCTGTTGTAGTTCCATACGAGTTGTTTTTTAATATCTGGTTTCGTTTTTATGTCATCTACAAAGCAGATTGGTGTTTTGGTACCAACTTTGTGTCGGAAGGTGACAATATTAATTGAGCTCTTCCATTTGATAATCATTGTGGAATCATTATGTTTCCACACTGTAATAATGGAGGAGACATGCGGGTACCTGGTGGTATCTTTAGCCTCCTTGTTCTGCTACTTTTGATTTCTCTGTCGCAATGCTTTAATAGTCTAAAGCGTTAGGCCTTTATATTTATTAAGAAATAACTATTCAAACCATAAAAACGTACAATCAACTAGTATATAAAGCATAATGATTGTATGGAAGGGTAAAAAATACACACTTATCATCAGTTGCACTTTCTTAAAAAGGATTCTACAAGGCCATTCTTAGCATCTTTACCATAATTAATCAATTGACTTGTTTTTAAATTTTGTTTGCATGTTTTTAAATCTATGTGTTAAGTGTAGGAATAGGCTTAACTACTGCAACTTGTGATGTATTAGTATTACAAAGGAACTTGTACATTTCGAAGACCATGCAAATTAACACTATTATTCTAACCATTACTTAAGGGAAAGACTTTGAGCCTTAGTGTCTCATGGAGGCTTGAAGACTCCAAAGCCTTTAGAACATTATGGGAGAATATAACATTACAAGTGTAGGTGGGAATTCGAATCTTCAACATTAAGGGAGAATGTTTATATCTTAACTAATTGAGCTATGTTTAAGTTGACAAACATACATAATCTTATACATAAAAATGTATGGTTGTTGTGCTTTTCAGTATCTGTGGTGTCTTTTATTGTTATCTAACAGGTAGGCTCCTTTTATTATTAGTTTTGAAGTATGTAAGTTCATTGGTTTAAGAGTCTATGATGCCATTTTATTTGATCCTTTTGACTTGCCTATTATGAGCAATAGGAGTATTAGAAAGAATATGTACTACTTTCAGTTAATTTTCACATGCTTGTATATATACTTTGTTCATCAGGGCATGCTATGGTGTTCTGAGATTTGTCATGGAAAGTGGAGCAAAGGGTTGTGAGGTTAGCTTTTAGCTCAATCATCATTAATTTCACTGTATGAAAAATTATTGTTGGATATTTATACATGGTAATTCTCAACGTCCAAACAGGTGATTGTTAGCGGAAAGCTCAGGGCACAGCGTGCCAAGTCTATGAAGTTCAAGGATGGATACATGATATCTTCAGGTCAACCAGTCAGAGATTATATTGACTCTGCTGTTAGACATGTTCTTCTCAGACAGGTTTGCTTACAATGGTCCTACAAGAAACAGGTTCTTACTCGATGTGTTCTGTTGTTGTATGCTGATGTTATTGTTGTTTTCCTTTTTGGCTCAGGGTGTTCTGGGTATCAAAGTTAAGATAATGCTCGACTGGGATCCTAAGGGCAAGCAAGGCCCTACCACTCCTCTCCCTGATGTTGTTACCATCCACTCTCCCAAGGAGGAAGAAGAAATCGTCCATAGACCAGCAATTTTGTCCACTGATATTGAGATTCCAGTAGTAGTTGCTTGA

mRNA sequence

ATGTCGACTCAGATGAGTAAGAAGAGAAAGTTCGTAGCCGATGGAGTATTTTTTGCCGAGTTAAACGAGGTTCTGACCAGAGAGTTGGCTGAGGATGGATACTCCGGAGTTGAGGTTAGAGTAACTCCTATGCGCACCGAGATCATCATCCGAGCCACCCGCACCCAAAACGTTCTCGGAGAAAAGGGCAGGAGAATTAGGGAACTGACCTCGGTTGTGCAGAAGCGGTTCAAGTTTCCGGAGAACAGTGTTGAGCTTTATGCCGAGAAAGTTAACAACAGAGGGCTTTGCGCCATTGCCCAAGCCGAATCTCTTCGCTATAAGCTACTTGGTGGCCTTGCTGTTCGGAGGGCATGCTATGGTGTTCTGAGATTTGTCATGGAAAGTGGAGCAAAGGGTTGTGAGGTGATTGTTAGCGGAAAGCTCAGGGCACAGCGTGCCAAGTCTATGAAGTTCAAGGATGGATACATGATATCTTCAGGTCAACCAGTCAGAGATTATATTGACTCTGCTGTTAGACATGTTCTTCTCAGACAGGGTGTTCTGGGTATCAAAGTTAAGATAATGCTCGACTGGGATCCTAAGGGCAAGCAAGGCCCTACCACTCCTCTCCCTGATGTTGTTACCATCCACTCTCCCAAGGAGGAAGAAGAAATCGTCCATAGACCAGCAATTTTGTCCACTGATATTGAGATTCCAGTAGTAGTTGCTTGA

Coding sequence (CDS)

ATGTCGACTCAGATGAGTAAGAAGAGAAAGTTCGTAGCCGATGGAGTATTTTTTGCCGAGTTAAACGAGGTTCTGACCAGAGAGTTGGCTGAGGATGGATACTCCGGAGTTGAGGTTAGAGTAACTCCTATGCGCACCGAGATCATCATCCGAGCCACCCGCACCCAAAACGTTCTCGGAGAAAAGGGCAGGAGAATTAGGGAACTGACCTCGGTTGTGCAGAAGCGGTTCAAGTTTCCGGAGAACAGTGTTGAGCTTTATGCCGAGAAAGTTAACAACAGAGGGCTTTGCGCCATTGCCCAAGCCGAATCTCTTCGCTATAAGCTACTTGGTGGCCTTGCTGTTCGGAGGGCATGCTATGGTGTTCTGAGATTTGTCATGGAAAGTGGAGCAAAGGGTTGTGAGGTGATTGTTAGCGGAAAGCTCAGGGCACAGCGTGCCAAGTCTATGAAGTTCAAGGATGGATACATGATATCTTCAGGTCAACCAGTCAGAGATTATATTGACTCTGCTGTTAGACATGTTCTTCTCAGACAGGGTGTTCTGGGTATCAAAGTTAAGATAATGCTCGACTGGGATCCTAAGGGCAAGCAAGGCCCTACCACTCCTCTCCCTGATGTTGTTACCATCCACTCTCCCAAGGAGGAAGAAGAAATCGTCCATAGACCAGCAATTTTGTCCACTGATATTGAGATTCCAGTAGTAGTTGCTTGA

Protein sequence

MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPAILSTDIEIPVVVA

Homology

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BLAST of Moc08g45890 vs. NCBI nr
Match: XP_022154712.1 (40S ribosomal protein S3-2-like [Momordica charantia])

HSP 1 Score: 459.9 bits (1182), Expect = 1.3e-125
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPAILSTDIEIPVVVA 238
           VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPAILSTDIEIPVVVA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPAILSTDIEIPVVVA 237

[Close]

BLAST of Moc08g45890 vs. NCBI nr
Match: XP_023546322.1 (40S ribosomal protein S3-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 449.9 bits (1156), Expect = 1.4e-122
Identity = 232/239 (97.07%), Postives = 236/239 (98.74%), Query Frame = 0


Query: 1   MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M+TQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRP--AILSTDIEIPVVVA 238
           VLGIKVKIMLDWDPKGKQGPTTPLPDVV IHSPKEEEEIVHRP  A+L+TDIE+PVVVA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAVLTTDIEVPVVVA 239

[Close]

BLAST of Moc08g45890 vs. NCBI nr
Match: KAG6599520.1 (40S ribosomal protein S3-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 449.1 bits (1154), Expect = 2.3e-122
Identity = 232/241 (96.27%), Postives = 236/241 (97.93%), Query Frame = 0


Query: 1   MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M+TQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 651 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 710

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 711 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 770

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 771 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 830

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRP----AILSTDIEIPVVV 238
           VLGIKVKIMLDWDPKGKQGPTTPLPDVV IHSPKEEEEIVHRP    A+L+TDIE+PVVV
Sbjct: 831 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAAAVLTTDIEVPVVV 890

[Close]

BLAST of Moc08g45890 vs. NCBI nr
Match: XP_038890738.1 (40S ribosomal protein S3-2 [Benincasa hispida])

HSP 1 Score: 448.7 bits (1153), Expect = 3.0e-122
Identity = 231/237 (97.47%), Postives = 235/237 (99.16%), Query Frame = 0


Query: 1   MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M+TQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRP-AILSTDIEIPVVV 237
           VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRP A+L+TDIE+PV V
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPAAVLTTDIEVPVAV 237

[Close]

BLAST of Moc08g45890 vs. NCBI nr
Match: XP_022946744.1 (40S ribosomal protein S3-2-like [Cucurbita moschata])

HSP 1 Score: 448.4 bits (1152), Expect = 4.0e-122
Identity = 232/243 (95.47%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M+TQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRP------AILSTDIEIPV 238
           VLGIKVKIMLDWDPKGKQGPTTPLPDVV IHSPKEEEEIVHRP      A+L+TDIE+PV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAAAAAVLTTDIEVPV 240

[Close]

BLAST of Moc08g45890 vs. ExPASy Swiss-Prot
Match: Q9M339 (40S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 2.1e-110
Identity = 208/240 (86.67%), Postives = 218/240 (90.83%), Query Frame = 0


Query: 1   MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M+TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEI-----VHRPAILSTDIEIPVV 236
           VLGIKVK+MLDWDPKG  GP TPLPDVV IHSPKEEE I     V  PA L  D  +  V
Sbjct: 181 VLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQVAAPAALVADAPLTAV 240

[Close]

BLAST of Moc08g45890 vs. ExPASy Swiss-Prot
Match: Q9FJA6 (40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 2.3e-109
Identity = 199/233 (85.41%), Postives = 218/233 (93.56%), Query Frame = 0


Query: 1   MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M+TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPAILSTDIEIP 234
           VLG+KVKIMLDWDPKGKQGP TPLPDVV IH+PKE++  +    +++    +P
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVVTQAAFVP 233

[Close]

BLAST of Moc08g45890 vs. ExPASy Swiss-Prot
Match: Q9SIP7 (40S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 2.6e-108
Identity = 197/216 (91.20%), Postives = 209/216 (96.76%), Query Frame = 0


Query: 1   MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M+TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEE 217
           VLGIKVKIMLDWDP GK GP TPLPDVV IH+PK++
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDD 216

[Close]

BLAST of Moc08g45890 vs. ExPASy Swiss-Prot
Match: P02350 (40S ribosomal protein S3-A OS=Xenopus laevis OX=8355 GN=rps3-a PE=2 SV=2)

HSP 1 Score: 353.6 bits (906), Expect = 1.7e-96
Identity = 182/216 (84.26%), Postives = 192/216 (88.89%), Query Frame = 0


Query: 1   MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M+ Q+SKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1   MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEE 217
           VLGIKVKIML WDP GK GP  PLPD V+I  PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216

[Close]

BLAST of Moc08g45890 vs. ExPASy Swiss-Prot
Match: P47835 (40S ribosomal protein S3-B OS=Xenopus laevis OX=8355 GN=rps3-b PE=2 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 1.7e-96
Identity = 182/216 (84.26%), Postives = 192/216 (88.89%), Query Frame = 0


Query: 1   MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M+ QMSKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP +TEIII ATRTQNVLG
Sbjct: 1   MAAQMSKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTQTEIIILATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEE 217
           VLGIKVKIML WDP GK GP  PLPD V+I  PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216

[Close]

BLAST of Moc08g45890 vs. ExPASy TrEMBL
Match: A0A6J1DMD4 (40S ribosomal protein S3-2-like OS=Momordica charantia OX=3673 GN=LOC111021901 PE=3 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 6.4e-126
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPAILSTDIEIPVVVA 238
           VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPAILSTDIEIPVVVA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPAILSTDIEIPVVVA 237

[Close]

BLAST of Moc08g45890 vs. ExPASy TrEMBL
Match: A0A6J1G4R4 (40S ribosomal protein S3-2-like OS=Cucurbita moschata OX=3662 GN=LOC111450719 PE=3 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 1.9e-122
Identity = 232/243 (95.47%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M+TQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRP------AILSTDIEIPV 238
           VLGIKVKIMLDWDPKGKQGPTTPLPDVV IHSPKEEEEIVHRP      A+L+TDIE+PV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAAAAAVLTTDIEVPV 240

[Close]

BLAST of Moc08g45890 vs. ExPASy TrEMBL
Match: A0A6J1KF90 (40S ribosomal protein S3-2-like OS=Cucurbita maxima OX=3661 GN=LOC111493776 PE=3 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 3.3e-122
Identity = 231/241 (95.85%), Postives = 235/241 (97.51%), Query Frame = 0


Query: 1   MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M+TQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRP----AILSTDIEIPVVV 238
           VLGIKVKIMLDWDPKGKQGPTTPLPDVV IHSPKEEEEIVHRP    A+L+TDIE+PVVV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPSAAAAVLTTDIEVPVVV 240

[Close]

BLAST of Moc08g45890 vs. ExPASy TrEMBL
Match: A0A0A0LHQ6 (KH type-2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000230 PE=3 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 5.6e-122
Identity = 230/237 (97.05%), Postives = 234/237 (98.73%), Query Frame = 0


Query: 1   MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M+TQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHR-PAILSTDIEIPVVV 237
           VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHR PA+L+ DIE+PV V
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAV 237

[Close]

BLAST of Moc08g45890 vs. ExPASy TrEMBL
Match: A0A1S3CAV4 (40S ribosomal protein S3-2 OS=Cucumis melo OX=3656 GN=LOC103498727 PE=3 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 5.6e-122
Identity = 230/237 (97.05%), Postives = 234/237 (98.73%), Query Frame = 0


Query: 1   MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M+TQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHR-PAILSTDIEIPVVV 237
           VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHR PA+L+ DIE+PV V
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIEVPVAV 237

[Close]

BLAST of Moc08g45890 vs. TAIR 10
Match: AT3G53870.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 399.8 bits (1026), Expect = 1.5e-111
Identity = 208/240 (86.67%), Postives = 218/240 (90.83%), Query Frame = 0


Query: 1   MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M+TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEI-----VHRPAILSTDIEIPVV 236
           VLGIKVK+MLDWDPKG  GP TPLPDVV IHSPKEEE I     V  PA L  D  +  V
Sbjct: 181 VLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQVAAPAALVADAPLTAV 240

[Close]

BLAST of Moc08g45890 vs. TAIR 10
Match: AT5G35530.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 396.4 bits (1017), Expect = 1.7e-110
Identity = 199/233 (85.41%), Postives = 218/233 (93.56%), Query Frame = 0


Query: 1   MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M+TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPAILSTDIEIP 234
           VLG+KVKIMLDWDPKGKQGP TPLPDVV IH+PKE++  +    +++    +P
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVVTQAAFVP 233

[Close]

BLAST of Moc08g45890 vs. TAIR 10
Match: AT2G31610.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 392.9 bits (1008), Expect = 1.8e-109
Identity = 197/216 (91.20%), Postives = 209/216 (96.76%), Query Frame = 0


Query: 1   MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M+TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEE 217
           VLGIKVKIMLDWDP GK GP TPLPDVV IH+PK++
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDD 216

The following BLAST results are available for this feature:

BLAST of Moc08g45890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154712.1	1.3e-125	100.00	40S ribosomal protein S3-2-like [Momordica charantia]	[more]
XP_023546322.1	1.4e-122	97.07	40S ribosomal protein S3-2-like [Cucurbita pepo subsp. pepo]	[more]
KAG6599520.1	2.3e-122	96.27	40S ribosomal protein S3-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038890738.1	3.0e-122	97.47	40S ribosomal protein S3-2 [Benincasa hispida]	[more]
XP_022946744.1	4.0e-122	95.47	40S ribosomal protein S3-2-like [Cucurbita moschata]	[more]

BLAST of Moc08g45890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M339	2.1e-110	86.67	40S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1	[more]
Q9FJA6	2.3e-109	85.41	40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1	[more]
Q9SIP7	2.6e-108	91.20	40S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1	[more]
P02350	1.7e-96	84.26	40S ribosomal protein S3-A OS=Xenopus laevis OX=8355 GN=rps3-a PE=2 SV=2	[more]
P47835	1.7e-96	84.26	40S ribosomal protein S3-B OS=Xenopus laevis OX=8355 GN=rps3-b PE=2 SV=1	[more]

BLAST of Moc08g45890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DMD4	6.4e-126	100.00	40S ribosomal protein S3-2-like OS=Momordica charantia OX=3673 GN=LOC111021901 P...	[more]
A0A6J1G4R4	1.9e-122	95.47	40S ribosomal protein S3-2-like OS=Cucurbita moschata OX=3662 GN=LOC111450719 PE...	[more]
A0A6J1KF90	3.3e-122	95.85	40S ribosomal protein S3-2-like OS=Cucurbita maxima OX=3661 GN=LOC111493776 PE=3...	[more]
A0A0A0LHQ6	5.6e-122	97.05	KH type-2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000230 P...	[more]
A0A1S3CAV4	5.6e-122	97.05	40S ribosomal protein S3-2 OS=Cucumis melo OX=3656 GN=LOC103498727 PE=3 SV=1	[more]

BLAST of Moc08g45890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53870.1	1.5e-111	86.67	Ribosomal protein S3 family protein	[more]
AT5G35530.1	1.7e-110	85.41	Ribosomal protein S3 family protein	[more]
AT2G31610.1	1.8e-109	91.20	Ribosomal protein S3 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004044	K Homology domain, type 2	PFAM	PF07650	KH_2	coord: 20..93 e-value: 1.1E-12 score: 47.6
IPR004044	K Homology domain, type 2	PROSITE	PS50823	KH_TYPE_2	coord: 21..92 score: 11.333969
IPR001351	Ribosomal protein S3, C-terminal	PFAM	PF00189	Ribosomal_S3_C	coord: 106..188 e-value: 2.3E-25 score: 88.9
IPR005703	Ribosomal protein S3, eukaryotic/archaeal	TIGRFAM	TIGR01008	TIGR01008	coord: 8..211 e-value: 3.0E-71 score: 237.2
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	GENE3D	3.30.1140.32		coord: 93..219 e-value: 8.6E-67 score: 224.9
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	SUPERFAMILY	54821	Ribosomal protein S3 C-terminal domain	coord: 93..191
IPR015946	K homology domain-like, alpha/beta	GENE3D	3.30.300.20		coord: 1..91 e-value: 2.5E-48 score: 164.0
None	No IPR available	PANTHER	PTHR11760	30S/40S RIBOSOMAL PROTEIN S3	coord: 2..233
None	No IPR available	PANTHER	PTHR11760:SF51	RIBOSOMAL PROTEIN S3, PUTATIVE-RELATED	coord: 2..233
None	No IPR available	CDD	cd02413	40S_S3_KH	coord: 15..95 e-value: 2.07582E-51 score: 159.695
IPR018280	Ribosomal protein S3, conserved site	PROSITE	PS00548	RIBOSOMAL_S3	coord: 147..183
IPR009019	K homology domain superfamily, prokaryotic type	SUPERFAMILY	54814	Prokaryotic type KH domain (KH-domain type II)	coord: 10..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g45890.1	Moc08g45890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005634	nucleus
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome