Moc08g44280 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g44280
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	ethylene-responsive transcription factor WIN1-like
Location	chr8: 34010235 .. 34015557 (+)
RNA-Seq Expression	Moc08g44280
Synteny	Moc08g44280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCAAACGGCAGCGGCAGCCGATCAAGAAAAACCCGACCGGATTTCACCGTATTCTCCGAAAGGTCTGTCGGAGATTCTCCACGCCAAGCTTCGAAAATGCGGCAAAGCGCCGTCTCCATCGATGACGTGTCTGAGGCTCGACACTGAAAATTCCCACATCGGCGTGTGGCAGAAACGCGCCGGCCAACCCACCTGGATCATGACCGCTCACCTCGGAAAACAGACTGCCGCACGAGACGACGGTCGTTTGCGAAATAATAGTAATAATAATAACTTTTCTGATGTTCCTGCTCGTCCTCCAGTGACGACGGGTGGACCGCATCGGAGGAATCTGCAGATTGATGAGGAAGAAAGAATTGCGCTGCAAATGATTGAGGAATTGCTGAGCAGAAACTGCTGCAGCCCATCTGATCATAATCTTCAAGTTCAAGTTCAAGATCAAGGGGAAGAAAGTTTTAATTTCGCTCTTTAACTTAAAATTAATTATATATATTATGATTGGCGTTGTGTGTGAATTTATATACATAATATATGATATTAATTACTATGATAATTATTATTATTTATGTATGCAACTGTACATTGAAATAAAGTCTCAAGTTTACTAGGAAATGACTTAAATTTGTGTCATTTGCTAAGTGAGATCACTTTAATTAGGATTAGTTTAAGTATATAACTTCTTCTTGTAATTTTATTTTCTTTTTATATTGTAAACTTCGAGAGGTATTTTTTCACGGTTTTTAATTAATATGAAATCATTATAAGGTTTCTTTGGGTGAAGATTTTGTTTTTATTTATTTTGAGAAATATTTTCATTTTTTATTTTATTAGTGAATAGCGGAGTTAATTCCTATTTTAATTAGAATGGATGGTTTATAAAATTCTGTGTATGATTATTGGATTATAGTATGGACAATACTTCTTTATTGTGTGAGCATTAGGGAGATTTTGTTATCGTGCCGTATTAAGCTTTTGAGAGATTGGAGAGAGACAGAGAAGAAGAAAAATGCACACTTTACTTACTCGATCCAAATTTTTCATTTTTTTTTATCTACTATTAATCTTGAACTAAATTAAGAAATAAAATATAGAGAGACCAATTGAGAATGAGAGAGAGACTAAATGAGGACACAGATGAAGAAATCAGTGAGACTAAACGATGGAACAAGATCAAGAGAGAGTGTGTGACAAAGAATGCGACAGACCAAATGAGGGAATAAAAAGCTAGAGGGAGAGAGACCAAACGAGTTTAAGAAATCGATGAAATAAAGACATTCCACACATAATAAGAGAAAGATCGAGTATATATATCTTAACATTATTGAGTTATACTCGTATTAATATTTAATGTCCTATTGCATATAACTGATTGCGGATGAAACTAATTAGTCTCCTTTATCTTAAAATTTTCTTCTTTCCACTAAAAAAAACATACATCGATCACAAGATTTCAATCTTGAACTTGTACCCCTTTTGTATAATTAAATTTATAGATATCCAACTTAACTTAAATTATTTTTTTATGGGTTCTAGTTTGCATATCTCAACTAAAACTTATATCAATGGCTCGATTCAAACTTAATGAACTATTTAGACTTATCTGAGTTTAAATTTTCCTCAAGTAATCTTGAATCCATCTAATGAAATTAACAACTAAGCATTCAAGATTTGGATTATCAAATCATTATCAAATAAATTAGAGAATAATTAACGCCATTGCACCATTTAGTTTCAAAAGCTTTCAAATTTGTTGTTAATTAGCATACCATTTTTAGTTGGCATAGGATTTGAATATATAAAATTTTTCTACCAAACAAAGTGAACATAGTTCAGTGGTATTATACAAAAAAATAATTTAAAAAATTTATTATTATTTATTTTTCAGTACAACAATTGGAGTGAGGTGTTTCGATCTCATGACTTCATAGTCAAAGATAAGTTAAGAAGCTCGTGTGGGCATTTTTTAAAAATTATTCCTACATCAGAAGACTTGTAATTATTTGTGACCTATGGTTCAAAATTTTGTTTGGTTGTGCCCTCACAAAATATATGAAACCTACCCACAATCATGACAAATAGTAATTTTATTTTTGTAGTCCAAAAAGCGAGATTTCAAATCTCCGACCCTCTAAGAAAGTTAAAGTAGTATGTGGACCAGTTAAGCTAATCTCGTGTTGGCTAGTACTTTCATTTTCTATATCCTTTTTGAAAAGTTATTTAATTGTTTGGTTTCAATTTAATTTTGATTTTTTTAGTACTAAATTTTATTTTGATCTACGCTTTATATATTTTGGTGTCTAAATTGTTAAATATTATACTTAATCTCTTTATTTTTAGGCATATCTGTATTAGTCTTTAAATTTTTAATAATTAGTATATCTACCTACCTTTTCTCTATTCATCCCAAAGAAGAGGAATAGCTTTAATTAAATATCCCACACGACCATATACAAAAGCAAATTTATAATTTTTTTTAAGAAACAAATAAACCAAACTTTGAAAATCAATCATGGTCATTGACATGTTTAAAACGTGATACTAATTAATAACATATATCTTTTTGTAACTCATTCTTATTTCATTTATCACATGTACAGAATGTTAAAGATTCCACGTTGAAAAGAAAATGGACCTAACAAGAGGGTTTATAATATAAGTGGACTACTCCTCTCGTAGCCAATTGGTTTTTGTTAGCTTTACGAGCTTCAATCACACCAAATATTTTGATGATAACAAACTTTATTTACTGATGATTTTAGTGTTTCAAAGTGTCCATAGCACAGAGCTTGGAAAGACGAATTCAACGTATTTTGAATCACTTAAATCAGAGTTCAAACAAATAAATTATAGCCAAAACAAGTTGGTGAAAAAAAGCACATGTGGCAGGTGATGTGGCATCTAATTGTCAAATTATGCCACCGTGGCAATAATGTGGCAGTAACGTGGCATCAATAAATTTGGTGACGTGGTGGATGACGTGGACATATCATGTGACGACAAGTGACGCTTTCAATTTCGACAAATCAAATTCCTACAATTCTATCAATTCCACGATCTTTTTACAATTTCACATAATTTCTCAATCTCCATCAATTTCTCCAAATCTCCAGAATTTTCTTTATTTTTTTCCTTATCTCTATTTTTAATCTCCATCATCCATCCTTTGTTGCCTTAAATCCAACGGCCAAATTTCATCTTCGAAACTCTATTTAAAGCCACCAAATTTCACCATTCTCCAACCCAATTATCAAAGCAAACATTCTTCTATCTTCAAATCAGTTTGCTTTCAAACTTTTATTCTCTCCCCACAAAAAGTTGCCAATATTTTTTTGGTGAGAGAGTTTAGCTTTTTAGCTATTGCTTTAGTGTGAAATTTGTAAATTCACCTCAGTGAGGTATTTTCTTTGTATTATTCATTTCAAATTTTTGGGTTTTGTATTAAGGTGCGGGTACACCTTGAGTCGTGAGAAAAGGCAATTGGTTGGATCCTGAATCCTAGGACAAAAAAGAGAGTTGATTGGTTTGGTTCTCACCTGTAAGAGAGTCGGCGCAGTAAAATACCCAAAAAGGTCTTGGGGAGTGAAGTAGCGATTTTCGAACCACTATAAAAATTTCTGGTGTCATCTTTCTCTCTCCTCTTTAATTTATGTATTTAAATTTCATTTGATTTTTTGTTATTTTTAAAATTGTTTTTTAAAATCTAAAAGTTTGTAAGCAACCCTATTCACCCTCTAGTAATGCCATATCGATCCCACAATTTTGAGATGAAATTCCATGAATATTTATATATGGTATCAGAGTCCAAAAGCTCAAATGAGCATCCGGTCTGAAAATGAAATCTGTCCAAGATCGATGAGCCAAAAGAGCGGATCCATTGAATAGAGGATGAATGTTCGTTTCATTGTTAATTAGTTTTGAGATGGAACCATGAATATTGATAGAATATGAACTCTATTTGCAATAAAAATTTAGGTAGGGATTATTTGAAAATGTAGTTGGAAACTTAATGAAATCTTACTTACTACTTTGAAAATAGAGACACAACAATCTCTAAGATAAAGAAAACTTCCAAGGATATAGTGGTTTGTGGTTGATAATGATAATGAATGTGTATTTGTCAAAAATATGTCTTTCTCCCCTTGGATCTGTTTGGTACCCTTAAAAGAAAAAGAGTGCTTTCATTTGTGGTCCTCTATATGTTTAGGAATACCAATTTAAACTTTCACCAAATTTTGTACCAAAATTTTGAATTCATTGCTTGACAAACATGCATGAAGAAAAAGTTAATTTTATGTCTTGTCCCTTTCTTCAAAAGTGAAATGGTTTAGAATTTATTGTTTGGACGATAAATTAGAGTTCAGAGTCATTGTAAAAGTTATAAGAGAGTTTATTTTAATACAACACGTGAGATGAAGATTCGAATTCGTAACTTTTTAACATTGTCAGCCAAATGAGCATCATATAAAAATGATGTGGGTCTAGCATCATTATTAAATTATTTTTAAAAATAAATTATATAGTGTGAACAAAATGAGTGGATATAAGTAGTAGTAGAAATTTTTCCTTAACTAATAATGGTCAATGAGGACAACTTTTAGGATCGAAGTTGCATTAAAATGCCTCTCTATATTATCGTCGACGAGTGGTAATCATTATTTATTTTGGGGTTTAATTTGATGTGTAACTTAGGGCATCTTTGTCCCCTTTATTTTACTCAAACCATATCTGAATTAAGTTTTAGATAGGTTGAAGATATTTAATAAGTGAAAGAATATAAAGTTACATTGAAATCTAGAAAATATCATTATGTCAATTTAGATATAGGTTAAGTGATCAAATAAATATCATAGAAGTTCAAATCCCTCCCAATGGGGTTAAAATTGAAGAATAATATTTAAGAATAATTTTAACTGAAACTTAGCACTTGTTTTCTTATTGATTCTAGGGGGAGGTGGCGTTCTTGAATGAAGTCGAGACGAACCAAATTAGCACTTCTCAGATCACGTTAGGCCTCTCCAGCAGAGCTAGGCGTCGGGGCCCTGGATGCGGCCCGTTGGTCAAAGGAAAGGGGAGGTCCTGATGCCGAGACGGAGCCGTATGTGGCGCCTCAGGCTGAATTCCATGGTCGAGAACGCTGTAATAAGAAATTGGCCATGAGAGACCTTTTTAAGTATGGCAAAAGAAAAGGCCTGCTGATAGAGCTGGGCAGGAAGGCGAGGGCAATTAATCAAAGTGAGACCAGCTCGATTCGGATATCGAATCAAAGTGGATTTGTGTGTAACCAACTCCAGTTCCGGGAATCCATAGATGGATTTTGA

mRNA sequence

ATGAGCCAAACGGCAGCGGCAGCCGATCAAGAAAAACCCGACCGGATTTCACCGTATTCTCCGAAAGGTCTGTCGGAGATTCTCCACGCCAAGCTTCGAAAATGCGGCAAAGCGCCGTCTCCATCGATGACGTGTCTGAGGCTCGACACTGAAAATTCCCACATCGGCGTGTGGCAGAAACGCGCCGGCCAACCCACCTGGATCATGACCGCTCACCTCGGAAAACAGACTGCCGCACGAGACGACGGTCGTTTGCGAAATAATAGTAATAATAATAACTTTTCTGATGTTCCTGCTCGTCCTCCAGTGACGACGGGTGGACCGCATCGGAGGAATCTGCAGATTGATGAGGAAGAAAGAATTGCGCTGCAAATGATTGAGGAATTGCTGAGCAGAAACTGCTGCAGCCCATCTGATCATAATCTTCAAGTTCAAGTTCAAGATCAAGGGGAAGAAAAGCTAGGCGTCGGGGCCCTGGATGCGGCCCGTTGGTCAAAGGAAAGGGGAGGTCCTGATGCCGAGACGGAGCCGTATGTGGCGCCTCAGGCTGAATTCCATGGTCGAGAACGCTGTAATAAGAAATTGGCCATGAGAGACCTTTTTAAGTATGGCAAAAGAAAAGGCCTGCTGATAGAGCTGGGCAGGAAGGCGAGGGCAATTAATCAAAGTGAGACCAGCTCGATTCGGATATCGAATCAAAGTGGATTTGTGTGTAACCAACTCCAGTTCCGGGAATCCATAGATGGATTTTGA

Coding sequence (CDS)

ATGAGCCAAACGGCAGCGGCAGCCGATCAAGAAAAACCCGACCGGATTTCACCGTATTCTCCGAAAGGTCTGTCGGAGATTCTCCACGCCAAGCTTCGAAAATGCGGCAAAGCGCCGTCTCCATCGATGACGTGTCTGAGGCTCGACACTGAAAATTCCCACATCGGCGTGTGGCAGAAACGCGCCGGCCAACCCACCTGGATCATGACCGCTCACCTCGGAAAACAGACTGCCGCACGAGACGACGGTCGTTTGCGAAATAATAGTAATAATAATAACTTTTCTGATGTTCCTGCTCGTCCTCCAGTGACGACGGGTGGACCGCATCGGAGGAATCTGCAGATTGATGAGGAAGAAAGAATTGCGCTGCAAATGATTGAGGAATTGCTGAGCAGAAACTGCTGCAGCCCATCTGATCATAATCTTCAAGTTCAAGTTCAAGATCAAGGGGAAGAAAAGCTAGGCGTCGGGGCCCTGGATGCGGCCCGTTGGTCAAAGGAAAGGGGAGGTCCTGATGCCGAGACGGAGCCGTATGTGGCGCCTCAGGCTGAATTCCATGGTCGAGAACGCTGTAATAAGAAATTGGCCATGAGAGACCTTTTTAAGTATGGCAAAAGAAAAGGCCTGCTGATAGAGCTGGGCAGGAAGGCGAGGGCAATTAATCAAAGTGAGACCAGCTCGATTCGGATATCGAATCAAAGTGGATTTGTGTGTAACCAACTCCAGTTCCGGGAATCCATAGATGGATTTTGA

Protein sequence

MSQTAAAADQEKPDRISPYSPKGLSEILHAKLRKCGKAPSPSMTCLRLDTENSHIGVWQKRAGQPTWIMTAHLGKQTAARDDGRLRNNSNNNNFSDVPARPPVTTGGPHRRNLQIDEEERIALQMIEELLSRNCCSPSDHNLQVQVQDQGEEKLGVGALDAARWSKERGGPDAETEPYVAPQAEFHGRERCNKKLAMRDLFKYGKRKGLLIELGRKARAINQSETSSIRISNQSGFVCNQLQFRESIDGF

Homology

[Close]

BLAST of Moc08g44280 vs. NCBI nr
Match: XP_022143192.1 (ethylene-responsive transcription factor WIN1-like [Momordica charantia])

HSP 1 Score: 313.9 bits (803), Expect = 1.2e-81
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSQTAAAADQEKPDRISPYSPKGLSEILHAKLRKCGKAPSPSMTCLRLDTENSHIGVWQK 60
           MSQTAAAADQEKPDRISPYSPKGLSEILHAKLRKCGKAPSPSMTCLRLDTENSHIGVWQK
Sbjct: 64  MSQTAAAADQEKPDRISPYSPKGLSEILHAKLRKCGKAPSPSMTCLRLDTENSHIGVWQK 123

Query: 61  RAGQPTWIMTAHLGKQTAARDDGRLRNNSNNNNFSDVPARPPVTTGGPHRRNLQIDEEER 120
           RAGQPTWIMTAHLGKQTAARDDGRLRNNSNNNNFSDVPARPPVTTGGPHRRNLQIDEEER
Sbjct: 124 RAGQPTWIMTAHLGKQTAARDDGRLRNNSNNNNFSDVPARPPVTTGGPHRRNLQIDEEER 183

Query: 121 IALQMIEELLSRNCCSPSDHNLQVQVQDQGEE 153
           IALQMIEELLSRNCCSPSDHNLQVQVQDQGEE
Sbjct: 184 IALQMIEELLSRNCCSPSDHNLQVQVQDQGEE 215

[Close]

BLAST of Moc08g44280 vs. NCBI nr
Match: XP_022999174.1 (ethylene-responsive transcription factor WIN1-like [Cucurbita maxima])

HSP 1 Score: 167.5 bits (423), Expect = 1.4e-37
Identity = 99/165 (60.00%), Postives = 114/165 (69.09%), Query Frame = 0


Query: 1   MSQTAAAADQEKPDRISPYSPKGLSEILHAKLRKCGKAPSPSMTCLRLDTENSHIGVWQK 60
           MS+TAA   ++  +  +P S KGLSEILHAKLRKC KAPSPSMTCLRLDTENSHIGVWQK
Sbjct: 102 MSETAAPELEKLNNITTPSSTKGLSEILHAKLRKCSKAPSPSMTCLRLDTENSHIGVWQK 161

Query: 61  RAGQ---PTWIMTAHLGKQ-----TAAR-----DDGRLRNNSNNNNFSDVPARPPVTTGG 120
           RAGQ    +W+MT HLGK+     TAA      D GRL N+  +   S       +  GG
Sbjct: 162 RAGQRSDSSWVMTVHLGKENSSSSTAAAYGGNDDGGRLWNSKKSGGAS-------MAGGG 221

Query: 121 PHRRNLQIDEEERIALQMIEELLSRNCCSPSDHNLQVQVQDQGEE 153
           PH RNLQ+DEEERIALQMIEELLSRN  +PS    ++QVQD  EE
Sbjct: 222 PHMRNLQMDEEERIALQMIEELLSRNYGNPS----EIQVQDHQEE 255

[Close]

BLAST of Moc08g44280 vs. NCBI nr
Match: XP_022946212.1 (ethylene-responsive transcription factor WIN1-like [Cucurbita moschata])

HSP 1 Score: 166.8 bits (421), Expect = 2.4e-37
Identity = 99/166 (59.64%), Postives = 113/166 (68.07%), Query Frame = 0


Query: 1   MSQTAAAADQEKPDRISPYSPKGLSEILHAKLRKCGKAPSPSMTCLRLDTENSHIGVWQK 60
           MS+TAA   ++  +  +P S KGLSEILHAKLRKC KAPSPSMTCLRLDTENSHIGVWQK
Sbjct: 64  MSETAAPELEKLNNITTPSSTKGLSEILHAKLRKCSKAPSPSMTCLRLDTENSHIGVWQK 123

Query: 61  RAGQ---PTWIMTAHLGKQ------TAAR-----DDGRLRNNSNNNNFSDVPARPPVTTG 120
           RAGQ    +W+MT HLGK+      TAA      D GRL N   +   S       +  G
Sbjct: 124 RAGQRSDSSWVMTVHLGKENSSSSSTAAASGGNDDGGRLWNGKKSGGAS-------MAGG 183

Query: 121 GPHRRNLQIDEEERIALQMIEELLSRNCCSPSDHNLQVQVQDQGEE 153
           GPH RNLQ+DEEERIALQMIEELLSRN  +PS    ++QVQD  EE
Sbjct: 184 GPHMRNLQMDEEERIALQMIEELLSRNYGNPS----EIQVQDHHEE 218

[Close]

BLAST of Moc08g44280 vs. NCBI nr
Match: KAG6599400.1 (Ethylene-responsive transcription factor WIN1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030385.1 Ethylene-responsive transcription factor WIN1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 166.8 bits (421), Expect = 2.4e-37
Identity = 96/166 (57.83%), Postives = 112/166 (67.47%), Query Frame = 0


Query: 1   MSQTAAAADQEKPDRISPYSPKGLSEILHAKLRKCGKAPSPSMTCLRLDTENSHIGVWQK 60
           MS+TAA   ++  +  +P S KGLSEILHAKLRKC KAPSPSMTCLRLDTENSHIGVWQK
Sbjct: 64  MSETAAPELEKLNNITTPSSTKGLSEILHAKLRKCSKAPSPSMTCLRLDTENSHIGVWQK 123

Query: 61  RAGQ---PTWIMTAHLGKQTAAR-----------DDGRLRNNSNNNNFSDVPARPPVTTG 120
           RAGQ    +W+MT HLGK+ ++            D GRL N   +   S       +  G
Sbjct: 124 RAGQRSDSSWVMTVHLGKENSSSSSIAAASGGNDDGGRLWNGKKSGGAS-------MAGG 183

Query: 121 GPHRRNLQIDEEERIALQMIEELLSRNCCSPSDHNLQVQVQDQGEE 153
           GPH RNLQ+DEEERIALQMIEELLSRN  +PS    ++QVQD  EE
Sbjct: 184 GPHMRNLQMDEEERIALQMIEELLSRNYGNPS----EIQVQDHHEE 218

[Close]

BLAST of Moc08g44280 vs. NCBI nr
Match: XP_023522237.1 (ethylene-responsive transcription factor WIN1-like [Cucurbita pepo subsp. pepo] >XP_023546818.1 ethylene-responsive transcription factor WIN1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 165.2 bits (417), Expect = 7.1e-37
Identity = 99/171 (57.89%), Postives = 114/171 (66.67%), Query Frame = 0


Query: 1   MSQTAAAADQEKPDRISPYSPKGLSEILHAKLRKCGKAPSPSMTCLRLDTENSHIGVWQK 60
           MS+TAA   ++  +  +P S KGLSEILHAKLRKC KAPSPSMTCLRLDTENSHIGVWQK
Sbjct: 64  MSETAAPELEKLNNITTPSSTKGLSEILHAKLRKCSKAPSPSMTCLRLDTENSHIGVWQK 123

Query: 61  RAGQ---PTWIMTAHLGKQ-----------TAAR-----DDGRLRNNSNNNNFSDVPARP 120
           RAGQ    +W+MT HLGK+           TAA      D GRL N+  +   S      
Sbjct: 124 RAGQRSDSSWVMTVHLGKENSSSSSSSSSSTAAASGGNDDGGRLWNSKKSGGAS------ 183

Query: 121 PVTTGGPHRRNLQIDEEERIALQMIEELLSRNCCSPSDHNLQVQVQDQGEE 153
            +  GGPH RNLQ+DEEERIALQMIEELLSRN  +PS    ++QVQD  EE
Sbjct: 184 -MAGGGPHMRNLQMDEEERIALQMIEELLSRNYGNPS----EIQVQDHHEE 223

[Close]

BLAST of Moc08g44280 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 9.6e-21
Identity = 59/120 (49.17%), Postives = 76/120 (63.33%), Query Frame = 0


Query: 17  SPYSPKGLSEILHAKLRKCGKAPSPSMTCLRLDTENSHIGVWQKRAG---QPTWIMTAHL 76
           S  S   LS IL AKLRKC K+PSPS+TCLRLDT +SHIGVWQKRAG     +W+MT  L
Sbjct: 87  SSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDTASSHIGVWQKRAGSKSDSSWVMTVEL 146

Query: 77  GKQTAARDDGRLRNNSNNNNFSDVPARPPVTTGGPHRRNLQIDEEERIALQMIEELLSRN 134
           G  +++++       S  +  + +     V  GG   R   +DEEE++ALQMIEELL+ N
Sbjct: 147 GPASSSQE-----TTSKASQDAILAPTTEVEIGG--SREEVLDEEEKVALQMIEELLNTN 199

[Close]

BLAST of Moc08g44280 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.3e-17
Identity = 51/118 (43.22%), Postives = 67/118 (56.78%), Query Frame = 0


Query: 20  SPKGLSEILHAKLRKCGKAPSPSMTCLRLDTENSHIGVWQKRAG---QPTWIMTAHLGKQ 79
           SPK LSE+L+AKLRK  K  +P +TCLRLD ++SHIGVWQKRAG    P W+    LG +
Sbjct: 81  SPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAGSKTSPNWVKLVELGDK 140

Query: 80  TAARDDGRLRNNSNNNNFSDVPARPPVTTGGPHRRNLQIDEEERIALQMIEELLSRNC 135
             AR  G +  N                      RN  + E++++A+QMIEELL+  C
Sbjct: 141 VNARPGGDIETNKMK------------------VRNEDVQEDDQMAMQMIEELLNWTC 180

[Close]

BLAST of Moc08g44280 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.1e-16
Identity = 53/117 (45.30%), Postives = 69/117 (58.97%), Query Frame = 0


Query: 20  SPKGLSEILHAKLRKCGKAPSPSMTCLRLDTENSHIGVWQKRAG---QPTWIMTAHLGK- 79
           SPK LSE+L+AKLRK  K  +PS+TCLRLDT++SHIGVWQKRAG    PTW+M   LG  
Sbjct: 83  SPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQKRAGSKTSPTWVMRLELGNV 142

Query: 80  -QTAARDDGRLRNNSNNNNFSDVPARPPVTTGGPHRRNLQIDEEERIALQMIEELLS 132
              +A D G    N  N    +                  I +E+++A++MIEELL+
Sbjct: 143 VNESAVDLGLTTMNKQNVEKEE------------EEEEAIISDEDQLAMEMIEELLN 187

[Close]

BLAST of Moc08g44280 vs. ExPASy TrEMBL
Match: A0A6J1CQ30 (ethylene-responsive transcription factor WIN1-like OS=Momordica charantia OX=3673 GN=LOC111013122 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 5.9e-82
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSQTAAAADQEKPDRISPYSPKGLSEILHAKLRKCGKAPSPSMTCLRLDTENSHIGVWQK 60
           MSQTAAAADQEKPDRISPYSPKGLSEILHAKLRKCGKAPSPSMTCLRLDTENSHIGVWQK
Sbjct: 64  MSQTAAAADQEKPDRISPYSPKGLSEILHAKLRKCGKAPSPSMTCLRLDTENSHIGVWQK 123

Query: 61  RAGQPTWIMTAHLGKQTAARDDGRLRNNSNNNNFSDVPARPPVTTGGPHRRNLQIDEEER 120
           RAGQPTWIMTAHLGKQTAARDDGRLRNNSNNNNFSDVPARPPVTTGGPHRRNLQIDEEER
Sbjct: 124 RAGQPTWIMTAHLGKQTAARDDGRLRNNSNNNNFSDVPARPPVTTGGPHRRNLQIDEEER 183

Query: 121 IALQMIEELLSRNCCSPSDHNLQVQVQDQGEE 153
           IALQMIEELLSRNCCSPSDHNLQVQVQDQGEE
Sbjct: 184 IALQMIEELLSRNCCSPSDHNLQVQVQDQGEE 215

[Close]

BLAST of Moc08g44280 vs. ExPASy TrEMBL
Match: A0A6J1KGA9 (ethylene-responsive transcription factor WIN1-like OS=Cucurbita maxima OX=3661 GN=LOC111493635 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 6.9e-38
Identity = 99/165 (60.00%), Postives = 114/165 (69.09%), Query Frame = 0


Query: 1   MSQTAAAADQEKPDRISPYSPKGLSEILHAKLRKCGKAPSPSMTCLRLDTENSHIGVWQK 60
           MS+TAA   ++  +  +P S KGLSEILHAKLRKC KAPSPSMTCLRLDTENSHIGVWQK
Sbjct: 102 MSETAAPELEKLNNITTPSSTKGLSEILHAKLRKCSKAPSPSMTCLRLDTENSHIGVWQK 161

Query: 61  RAGQ---PTWIMTAHLGKQ-----TAAR-----DDGRLRNNSNNNNFSDVPARPPVTTGG 120
           RAGQ    +W+MT HLGK+     TAA      D GRL N+  +   S       +  GG
Sbjct: 162 RAGQRSDSSWVMTVHLGKENSSSSTAAAYGGNDDGGRLWNSKKSGGAS-------MAGGG 221

Query: 121 PHRRNLQIDEEERIALQMIEELLSRNCCSPSDHNLQVQVQDQGEE 153
           PH RNLQ+DEEERIALQMIEELLSRN  +PS    ++QVQD  EE
Sbjct: 222 PHMRNLQMDEEERIALQMIEELLSRNYGNPS----EIQVQDHQEE 255

[Close]

BLAST of Moc08g44280 vs. ExPASy TrEMBL
Match: A0A6J1G348 (ethylene-responsive transcription factor WIN1-like OS=Cucurbita moschata OX=3662 GN=LOC111450365 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.2e-37
Identity = 99/166 (59.64%), Postives = 113/166 (68.07%), Query Frame = 0


Query: 1   MSQTAAAADQEKPDRISPYSPKGLSEILHAKLRKCGKAPSPSMTCLRLDTENSHIGVWQK 60
           MS+TAA   ++  +  +P S KGLSEILHAKLRKC KAPSPSMTCLRLDTENSHIGVWQK
Sbjct: 64  MSETAAPELEKLNNITTPSSTKGLSEILHAKLRKCSKAPSPSMTCLRLDTENSHIGVWQK 123

Query: 61  RAGQ---PTWIMTAHLGKQ------TAAR-----DDGRLRNNSNNNNFSDVPARPPVTTG 120
           RAGQ    +W+MT HLGK+      TAA      D GRL N   +   S       +  G
Sbjct: 124 RAGQRSDSSWVMTVHLGKENSSSSSTAAASGGNDDGGRLWNGKKSGGAS-------MAGG 183

Query: 121 GPHRRNLQIDEEERIALQMIEELLSRNCCSPSDHNLQVQVQDQGEE 153
           GPH RNLQ+DEEERIALQMIEELLSRN  +PS    ++QVQD  EE
Sbjct: 184 GPHMRNLQMDEEERIALQMIEELLSRNYGNPS----EIQVQDHHEE 218

[Close]

BLAST of Moc08g44280 vs. ExPASy TrEMBL
Match: A0A5D3BHZ7 (Ethylene-responsive transcription factor WIN1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00280 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 9.3e-35
Identity = 97/177 (54.80%), Postives = 116/177 (65.54%), Query Frame = 0


Query: 1   MSQTAAAADQEKPDR------ISPYSPKGLSEILHAKLRKCGKAPSPSMTCLRLDTENSH 60
           MSQT   ++ EKPD       ISP SPKGLSEILHAKLRKC K PSPSMTCLRLDTENSH
Sbjct: 64  MSQT-TVSEFEKPDNNMINNIISPSSPKGLSEILHAKLRKCSKVPSPSMTCLRLDTENSH 123

Query: 61  IGVWQKRAGQ---PTWIMTAHLGKQTAA--------------RDDGRLRNNSNNNNFSDV 120
           IGVWQKRAGQ    +W+MT HLGK  ++               D GR++ N  + +FS +
Sbjct: 124 IGVWQKRAGQRSDSSWVMTVHLGKTNSSSSSSSTTAGGGEDGADGGRVKRNKRSGSFSGL 183

Query: 121 PARPPVTTGGP-HRRNLQI-DEEERIALQMIEELLSRNCCSPSDHNLQVQVQDQGEE 153
            +    + GG  H R L++ DEEERIALQMIEELLSRN  +PS+  +Q+Q    GEE
Sbjct: 184 MSSSEGSGGGSCHMRKLEMDDEEERIALQMIEELLSRNYGNPSE-IIQLQDHLHGEE 238

[Close]

BLAST of Moc08g44280 vs. ExPASy TrEMBL
Match: A0A0A0LKZ7 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G006270 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 9.3e-35
Identity = 97/177 (54.80%), Postives = 114/177 (64.41%), Query Frame = 0


Query: 1   MSQTAAAADQEKPDR------ISPYSPKGLSEILHAKLRKCGKAPSPSMTCLRLDTENSH 60
           MSQT A ++  KPD       ISP SPKGLSEILHAKLRKC K PSPSMTCLRLDTENSH
Sbjct: 64  MSQT-AVSEFGKPDDNMINNIISPSSPKGLSEILHAKLRKCSKVPSPSMTCLRLDTENSH 123

Query: 61  IGVWQKRAGQ---PTWIMTAHLGKQTAAR---------------DDGRLRNNSNNNNFSD 120
           IGVWQKRAGQ    +W+MT HLGK  ++                D GR++ N  +  FS 
Sbjct: 124 IGVWQKRAGQRSDSSWVMTVHLGKTNSSSSSSSTTTAGGGLEDGDGGRVKRNKKSGCFSG 183

Query: 121 VPARPPVTTGGPHRRNLQI-DEEERIALQMIEELLSRNCCSPSDHNLQVQVQDQGEE 153
           + +  P   G    R L++ DEEERIALQMIEELLSRN  +PS+  +Q+Q   QGEE
Sbjct: 184 LMSSSPEGGGSCQMRKLEMDDEEERIALQMIEELLSRNYGNPSE-IIQLQDHHQGEE 238

[Close]

BLAST of Moc08g44280 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 102.1 bits (253), Expect = 6.8e-22
Identity = 59/120 (49.17%), Postives = 76/120 (63.33%), Query Frame = 0


Query: 17  SPYSPKGLSEILHAKLRKCGKAPSPSMTCLRLDTENSHIGVWQKRAG---QPTWIMTAHL 76
           S  S   LS IL AKLRKC K+PSPS+TCLRLDT +SHIGVWQKRAG     +W+MT  L
Sbjct: 87  SSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDTASSHIGVWQKRAGSKSDSSWVMTVEL 146

Query: 77  GKQTAARDDGRLRNNSNNNNFSDVPARPPVTTGGPHRRNLQIDEEERIALQMIEELLSRN 134
           G  +++++       S  +  + +     V  GG   R   +DEEE++ALQMIEELL+ N
Sbjct: 147 GPASSSQE-----TTSKASQDAILAPTTEVEIGG--SREEVLDEEEKVALQMIEELLNTN 199

[Close]

BLAST of Moc08g44280 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 91.7 bits (226), Expect = 9.2e-19
Identity = 51/118 (43.22%), Postives = 67/118 (56.78%), Query Frame = 0


Query: 20  SPKGLSEILHAKLRKCGKAPSPSMTCLRLDTENSHIGVWQKRAG---QPTWIMTAHLGKQ 79
           SPK LSE+L+AKLRK  K  +P +TCLRLD ++SHIGVWQKRAG    P W+    LG +
Sbjct: 78  SPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAGSKTSPNWVKLVELGDK 137

Query: 80  TAARDDGRLRNNSNNNNFSDVPARPPVTTGGPHRRNLQIDEEERIALQMIEELLSRNC 135
             AR  G +  N                      RN  + E++++A+QMIEELL+  C
Sbjct: 138 VNARPGGDIETNKMK------------------VRNEDVQEDDQMAMQMIEELLNWTC 177

[Close]

BLAST of Moc08g44280 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 91.7 bits (226), Expect = 9.2e-19
Identity = 51/118 (43.22%), Postives = 67/118 (56.78%), Query Frame = 0


Query: 20  SPKGLSEILHAKLRKCGKAPSPSMTCLRLDTENSHIGVWQKRAG---QPTWIMTAHLGKQ 79
           SPK LSE+L+AKLRK  K  +P +TCLRLD ++SHIGVWQKRAG    P W+    LG +
Sbjct: 81  SPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAGSKTSPNWVKLVELGDK 140

Query: 80  TAARDDGRLRNNSNNNNFSDVPARPPVTTGGPHRRNLQIDEEERIALQMIEELLSRNC 135
             AR  G +  N                      RN  + E++++A+QMIEELL+  C
Sbjct: 141 VNARPGGDIETNKMK------------------VRNEDVQEDDQMAMQMIEELLNWTC 180

[Close]

BLAST of Moc08g44280 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 88.6 bits (218), Expect = 7.8e-18
Identity = 53/117 (45.30%), Postives = 69/117 (58.97%), Query Frame = 0


Query: 20  SPKGLSEILHAKLRKCGKAPSPSMTCLRLDTENSHIGVWQKRAG---QPTWIMTAHLGK- 79
           SPK LSE+L+AKLRK  K  +PS+TCLRLDT++SHIGVWQKRAG    PTW+M   LG  
Sbjct: 83  SPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQKRAGSKTSPTWVMRLELGNV 142

Query: 80  -QTAARDDGRLRNNSNNNNFSDVPARPPVTTGGPHRRNLQIDEEERIALQMIEELLS 132
              +A D G    N  N    +                  I +E+++A++MIEELL+
Sbjct: 143 VNESAVDLGLTTMNKQNVEKEE------------EEEEAIISDEDQLAMEMIEELLN 187

[Close]

BLAST of Moc08g44280 vs. TAIR 10
Match: ATMG00520.1 (Intron maturase, type II family protein )

HSP 1 Score: 58.9 bits (141), Expect = 6.6e-09
Identity = 30/51 (58.82%), Postives = 36/51 (70.59%), Query Frame = 0


Query: 179 VAPQAEFHGRERCNKKLAMRDLFKYGKRKGLLIELGRKARAINQSETSSIR 230
           + P+AEF+G ERCN   AMRDL KY KRKGLLIELG +A  + +SE    R
Sbjct: 253 LTPKAEFYGGERCNNNWAMRDLLKYCKRKGLLIELGGEAILVIRSERGLAR 303

The following BLAST results are available for this feature:

BLAST of Moc08g44280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143192.1	1.2e-81	100.00	ethylene-responsive transcription factor WIN1-like [Momordica charantia]	[more]
XP_022999174.1	1.4e-37	60.00	ethylene-responsive transcription factor WIN1-like [Cucurbita maxima]	[more]
XP_022946212.1	2.4e-37	59.64	ethylene-responsive transcription factor WIN1-like [Cucurbita moschata]	[more]
KAG6599400.1	2.4e-37	57.83	Ethylene-responsive transcription factor WIN1, partial [Cucurbita argyrosperma s...	[more]
XP_023522237.1	7.1e-37	57.89	ethylene-responsive transcription factor WIN1-like [Cucurbita pepo subsp. pepo] ...	[more]

BLAST of Moc08g44280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI33	9.6e-21	49.17	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q3E958	1.3e-17	43.22	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LFN7	1.1e-16	45.30	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Moc08g44280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQ30	5.9e-82	100.00	ethylene-responsive transcription factor WIN1-like OS=Momordica charantia OX=367...	[more]
A0A6J1KGA9	6.9e-38	60.00	ethylene-responsive transcription factor WIN1-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1G348	1.2e-37	59.64	ethylene-responsive transcription factor WIN1-like OS=Cucurbita moschata OX=3662...	[more]
A0A5D3BHZ7	9.3e-35	54.80	Ethylene-responsive transcription factor WIN1-like OS=Cucumis melo var. makuwa O...	[more]
A0A0A0LKZ7	9.3e-35	54.80	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G006270 PE=...	[more]

BLAST of Moc08g44280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15360.1	6.8e-22	49.17	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.1	9.2e-19	43.22	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	9.2e-19	43.22	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	7.8e-18	45.30	Integrase-type DNA-binding superfamily protein	[more]
ATMG00520.1	6.6e-09	58.82	Intron maturase, type II family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 7..140
None	No IPR available	PANTHER	PTHR31194:SF49	AP2-EREBP TRANSCRIPTION FACTOR	coord: 7..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g44280.1	Moc08g44280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity